data_3DKE # _entry.id 3DKE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DKE pdb_00003dke 10.2210/pdb3dke/pdb RCSB RCSB048147 ? ? WWPDB D_1000048147 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 181L 'T4 lysozyme L99A bound with benzene at room temperature' unspecified PDB 3DMV . unspecified PDB 3DMX . unspecified PDB 3DMZ . unspecified PDB 3DN0 . unspecified PDB 3DN1 . unspecified PDB 3DN2 . unspecified PDB 3DN3 . unspecified PDB 3DN4 . unspecified PDB 3DN6 . unspecified PDB 3DN8 . unspecified PDB 3DNA . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DKE _pdbx_database_status.recvd_initial_deposition_date 2008-06-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, L.J.' 1 'Matthews, B.W.' 2 # _citation.id primary _citation.title 'Use of experimental crystallographic phases to examine the hydration of polar and nonpolar cavities in T4 lysozyme' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 105 _citation.page_first 14406 _citation.page_last 14411 _citation.year 2008 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18780783 _citation.pdbx_database_id_DOI 10.1073/pnas.0806307105 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, L.' 1 ? primary 'Quillin, M.L.' 2 ? primary 'Matthews, B.W.' 3 ? # _cell.entry_id 3DKE _cell.length_a 60.226 _cell.length_b 60.226 _cell.length_c 96.677 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DKE _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Lysozyme 18755.826 1 3.2.1.17 'C54T, C97A, L99A, M102L' ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 4 non-polymer syn 'AZIDE ION' 42.020 1 ? ? ? ? 5 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 6 non-polymer syn BETA-MERCAPTOETHANOL 78.133 2 ? ? ? ? 7 non-polymer syn '2-HYDROXYETHYL DISULFIDE' 154.251 2 ? ? ? ? 8 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 9 water nat water 18.015 256 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lysis protein, Muramidase, Endolysin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)NIFE(MSE)LRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVD AAVRGILRNAKLKPVYDSLDAVRRAAAINLVFQ(MSE)GETGVAGFTNSLR(MSE)LQQKRWDEAAVNLAKSRWYNQTPN RAKRVITTFRTGTWDAYKNL ; _entity_poly.pdbx_seq_one_letter_code_can ;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILR NAKLKPVYDSLDAVRRAAAINLVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YKNL ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ASN n 1 3 ILE n 1 4 PHE n 1 5 GLU n 1 6 MSE n 1 7 LEU n 1 8 ARG n 1 9 ILE n 1 10 ASP n 1 11 GLU n 1 12 GLY n 1 13 LEU n 1 14 ARG n 1 15 LEU n 1 16 LYS n 1 17 ILE n 1 18 TYR n 1 19 LYS n 1 20 ASP n 1 21 THR n 1 22 GLU n 1 23 GLY n 1 24 TYR n 1 25 TYR n 1 26 THR n 1 27 ILE n 1 28 GLY n 1 29 ILE n 1 30 GLY n 1 31 HIS n 1 32 LEU n 1 33 LEU n 1 34 THR n 1 35 LYS n 1 36 SER n 1 37 PRO n 1 38 SER n 1 39 LEU n 1 40 ASN n 1 41 ALA n 1 42 ALA n 1 43 LYS n 1 44 SER n 1 45 GLU n 1 46 LEU n 1 47 ASP n 1 48 LYS n 1 49 ALA n 1 50 ILE n 1 51 GLY n 1 52 ARG n 1 53 ASN n 1 54 THR n 1 55 ASN n 1 56 GLY n 1 57 VAL n 1 58 ILE n 1 59 THR n 1 60 LYS n 1 61 ASP n 1 62 GLU n 1 63 ALA n 1 64 GLU n 1 65 LYS n 1 66 LEU n 1 67 PHE n 1 68 ASN n 1 69 GLN n 1 70 ASP n 1 71 VAL n 1 72 ASP n 1 73 ALA n 1 74 ALA n 1 75 VAL n 1 76 ARG n 1 77 GLY n 1 78 ILE n 1 79 LEU n 1 80 ARG n 1 81 ASN n 1 82 ALA n 1 83 LYS n 1 84 LEU n 1 85 LYS n 1 86 PRO n 1 87 VAL n 1 88 TYR n 1 89 ASP n 1 90 SER n 1 91 LEU n 1 92 ASP n 1 93 ALA n 1 94 VAL n 1 95 ARG n 1 96 ARG n 1 97 ALA n 1 98 ALA n 1 99 ALA n 1 100 ILE n 1 101 ASN n 1 102 LEU n 1 103 VAL n 1 104 PHE n 1 105 GLN n 1 106 MSE n 1 107 GLY n 1 108 GLU n 1 109 THR n 1 110 GLY n 1 111 VAL n 1 112 ALA n 1 113 GLY n 1 114 PHE n 1 115 THR n 1 116 ASN n 1 117 SER n 1 118 LEU n 1 119 ARG n 1 120 MSE n 1 121 LEU n 1 122 GLN n 1 123 GLN n 1 124 LYS n 1 125 ARG n 1 126 TRP n 1 127 ASP n 1 128 GLU n 1 129 ALA n 1 130 ALA n 1 131 VAL n 1 132 ASN n 1 133 LEU n 1 134 ALA n 1 135 LYS n 1 136 SER n 1 137 ARG n 1 138 TRP n 1 139 TYR n 1 140 ASN n 1 141 GLN n 1 142 THR n 1 143 PRO n 1 144 ASN n 1 145 ARG n 1 146 ALA n 1 147 LYS n 1 148 ARG n 1 149 VAL n 1 150 ILE n 1 151 THR n 1 152 THR n 1 153 PHE n 1 154 ARG n 1 155 THR n 1 156 GLY n 1 157 THR n 1 158 TRP n 1 159 ASP n 1 160 ALA n 1 161 TYR n 1 162 LYS n 1 163 ASN n 1 164 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene E _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteriophage T4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYS_BPT4 _struct_ref.pdbx_db_accession P00720 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILR NAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA YKNL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DKE _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00720 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 164 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 164 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DKE THR X 54 ? UNP P00720 CYS 54 'engineered mutation' 54 1 1 3DKE ALA X 97 ? UNP P00720 CYS 97 'engineered mutation' 97 2 1 3DKE ALA X 99 ? UNP P00720 LEU 99 'engineered mutation' 99 3 1 3DKE LEU X 102 ? UNP P00720 MET 102 'engineered mutation' 102 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 AZI non-polymer . 'AZIDE ION' ? 'N3 -1' 42.020 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HED non-polymer . '2-HYDROXYETHYL DISULFIDE' ? 'C4 H10 O2 S2' 154.251 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DKE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 54.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_details '2.0-2.2 M NaH2PO4 and K2HPO4, pH 6.9, 5mM BME, 5mM oxidized BME, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-01-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9796 1.0 2 0.9797 1.0 3 0.9742 1.0 4 0.9807 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9796,0.9797,0.9742,0.9807 # _reflns.entry_id 3DKE _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.25 _reflns.d_resolution_low 52.2 _reflns.number_all ? _reflns.number_obs 56299 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.2 _reflns.B_iso_Wilson_estimate 11.6 _reflns.pdbx_redundancy 9.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.27 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.214 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 13.9 _reflns_shell.pdbx_redundancy 7.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2753 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DKE _refine.ls_number_reflns_obs 53423 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 52.13 _refine.ls_d_res_high 1.25 _refine.ls_percent_reflns_obs 99.81 _refine.ls_R_factor_obs 0.15626 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15538 _refine.ls_R_factor_R_free 0.17281 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2851 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.960 _refine.B_iso_mean 14.834 _refine.aniso_B[1][1] -0.60 _refine.aniso_B[2][2] -0.60 _refine.aniso_B[3][3] 0.90 _refine.aniso_B[1][2] -0.30 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.041 _refine.pdbx_overall_ESU_R_Free 0.039 _refine.overall_SU_ML 0.019 _refine.overall_SU_B 0.915 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1305 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 57 _refine_hist.number_atoms_solvent 256 _refine_hist.number_atoms_total 1618 _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 52.13 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1405 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.142 1.979 ? 1883 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.551 5.000 ? 172 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.990 23.594 ? 64 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 9.729 15.000 ? 255 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.380 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.069 0.200 ? 206 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1016 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.202 0.200 ? 722 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 974 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.121 0.200 ? 191 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.052 0.200 ? 3 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.196 0.200 ? 65 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.188 0.200 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.671 1.500 ? 831 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.152 2.000 ? 1337 'X-RAY DIFFRACTION' ? r_scbond_it 2.393 3.000 ? 580 'X-RAY DIFFRACTION' ? r_scangle_it 3.414 4.500 ? 543 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.25 _refine_ls_shell.d_res_low 1.286 _refine_ls_shell.number_reflns_R_work 3840 _refine_ls_shell.R_factor_R_work 0.169 _refine_ls_shell.percent_reflns_obs 98.42 _refine_ls_shell.R_factor_R_free 0.204 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 209 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DKE _struct.title 'Polar and non-polar cavities in phage T4 lysozyme' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DKE _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'T4 lysozyme, cavity, experimental phases, Antimicrobial, Bacteriolytic enzyme, Glycosidase, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 7 ? K N N 8 ? L N N 8 ? M N N 9 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLY A 12 ? ASN X 2 GLY X 12 1 ? 11 HELX_P HELX_P2 2 SER A 38 ? GLY A 51 ? SER X 38 GLY X 51 1 ? 14 HELX_P HELX_P3 3 THR A 59 ? ASN A 81 ? THR X 59 ASN X 81 1 ? 23 HELX_P HELX_P4 4 LYS A 83 ? LEU A 91 ? LYS X 83 LEU X 91 1 ? 9 HELX_P HELX_P5 5 ASP A 92 ? GLY A 107 ? ASP X 92 GLY X 107 1 ? 16 HELX_P HELX_P6 6 GLU A 108 ? GLY A 110 ? GLU X 108 GLY X 110 5 ? 3 HELX_P HELX_P7 7 VAL A 111 ? GLY A 113 ? VAL X 111 GLY X 113 5 ? 3 HELX_P HELX_P8 8 PHE A 114 ? GLN A 123 ? PHE X 114 GLN X 123 1 ? 10 HELX_P HELX_P9 9 ARG A 125 ? LYS A 135 ? ARG X 125 LYS X 135 1 ? 11 HELX_P HELX_P10 10 SER A 136 ? THR A 142 ? SER X 136 THR X 142 1 ? 7 HELX_P HELX_P11 11 THR A 142 ? GLY A 156 ? THR X 142 GLY X 156 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C A ? ? 1_555 A ASN 2 N ? ? X MSE 1 X ASN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 1 C B ? ? 1_555 A ASN 2 N ? ? X MSE 1 X ASN 2 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? A GLU 5 C ? ? ? 1_555 A MSE 6 N ? ? X GLU 5 X MSE 6 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A MSE 6 C ? ? ? 1_555 A LEU 7 N ? ? X MSE 6 X LEU 7 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A GLN 105 C ? ? ? 1_555 A MSE 106 N ? ? X GLN 105 X MSE 106 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 106 C ? ? ? 1_555 A GLY 107 N ? ? X MSE 106 X GLY 107 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale7 covale both ? A ARG 119 C ? ? ? 1_555 A MSE 120 N ? ? X ARG 119 X MSE 120 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A MSE 120 C ? ? ? 1_555 A LEU 121 N ? ? X MSE 120 X LEU 121 1_555 ? ? ? ? ? ? ? 1.332 ? ? metalc1 metalc ? ? A GLU 11 O ? ? ? 1_555 B K . K ? ? X GLU 11 X K 601 1_555 ? ? ? ? ? ? ? 2.873 ? ? metalc2 metalc ? ? A TYR 18 OH ? ? ? 1_555 B K . K ? ? X TYR 18 X K 601 1_555 ? ? ? ? ? ? ? 2.757 ? ? metalc3 metalc ? ? B K . K ? ? ? 1_555 M HOH . O ? ? X K 601 X HOH 906 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc4 metalc ? ? B K . K ? ? ? 1_555 M HOH . O ? ? X K 601 X HOH 947 1_555 ? ? ? ? ? ? ? 2.716 ? ? metalc5 metalc ? ? B K . K ? ? ? 1_555 M HOH . O ? ? X K 601 X HOH 956 1_555 ? ? ? ? ? ? ? 2.752 ? ? metalc6 metalc ? ? B K . K ? ? ? 1_555 M HOH . O ? ? X K 601 X HOH 1045 1_555 ? ? ? ? ? ? ? 2.884 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 14 ? LYS A 19 ? ARG X 14 LYS X 19 A 2 TYR A 25 ? GLY A 28 ? TYR X 25 GLY X 28 A 3 HIS A 31 ? LEU A 32 ? HIS X 31 LEU X 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 18 ? N TYR X 18 O THR A 26 ? O THR X 26 A 2 3 N ILE A 27 ? N ILE X 27 O HIS A 31 ? O HIS X 31 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X K 601 ? 6 'BINDING SITE FOR RESIDUE K X 601' AC2 Software X CL 701 ? 6 'BINDING SITE FOR RESIDUE CL X 701' AC3 Software X CL 702 ? 3 'BINDING SITE FOR RESIDUE CL X 702' AC4 Software X AZI 401 ? 7 'BINDING SITE FOR RESIDUE AZI X 401' AC5 Software X EPE 901 ? 13 'BINDING SITE FOR RESIDUE EPE X 901' AC6 Software X BME 805 ? 5 'BINDING SITE FOR RESIDUE BME X 805' AC7 Software X BME 806 ? 7 'BINDING SITE FOR RESIDUE BME X 806' AC8 Software X HED 801 ? 5 'BINDING SITE FOR RESIDUE HED X 801' AC9 Software X HED 802 ? 9 'BINDING SITE FOR RESIDUE HED X 802' BC1 Software X GOL 501 ? 6 'BINDING SITE FOR RESIDUE GOL X 501' BC2 Software X GOL 502 ? 3 'BINDING SITE FOR RESIDUE GOL X 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 11 ? GLU X 11 . ? 1_555 ? 2 AC1 6 TYR A 18 ? TYR X 18 . ? 1_555 ? 3 AC1 6 HOH M . ? HOH X 906 . ? 1_555 ? 4 AC1 6 HOH M . ? HOH X 947 . ? 1_555 ? 5 AC1 6 HOH M . ? HOH X 956 . ? 1_555 ? 6 AC1 6 HOH M . ? HOH X 1045 . ? 1_555 ? 7 AC2 6 LYS A 124 ? LYS X 124 . ? 4_655 ? 8 AC2 6 THR A 142 ? THR X 142 . ? 1_555 ? 9 AC2 6 ASN A 144 ? ASN X 144 . ? 1_555 ? 10 AC2 6 ARG A 145 ? ARG X 145 . ? 1_555 ? 11 AC2 6 HOH M . ? HOH X 941 . ? 1_555 ? 12 AC2 6 HOH M . ? HOH X 1042 . ? 1_555 ? 13 AC3 3 ASN A 132 ? ASN X 132 . ? 1_555 ? 14 AC3 3 LYS A 135 ? LYS X 135 . ? 1_555 ? 15 AC3 3 HOH M . ? HOH X 910 . ? 1_555 ? 16 AC4 7 LYS A 19 ? LYS X 19 . ? 1_555 ? 17 AC4 7 ARG A 125 ? ARG X 125 . ? 4_655 ? 18 AC4 7 TRP A 126 ? TRP X 126 . ? 4_655 ? 19 AC4 7 ASP A 127 ? ASP X 127 . ? 4_655 ? 20 AC4 7 GLU A 128 ? GLU X 128 . ? 4_655 ? 21 AC4 7 HOH M . ? HOH X 924 . ? 4_655 ? 22 AC4 7 HOH M . ? HOH X 935 . ? 1_555 ? 23 AC5 13 ASP A 47 ? ASP X 47 . ? 2_654 ? 24 AC5 13 LYS A 48 ? LYS X 48 . ? 2_654 ? 25 AC5 13 GLY A 51 ? GLY X 51 . ? 2_654 ? 26 AC5 13 ASN A 53 ? ASN X 53 . ? 2_654 ? 27 AC5 13 GLY A 110 ? GLY X 110 . ? 1_555 ? 28 AC5 13 ALA A 112 ? ALA X 112 . ? 1_555 ? 29 AC5 13 GLY A 113 ? GLY X 113 . ? 1_555 ? 30 AC5 13 PHE A 114 ? PHE X 114 . ? 1_555 ? 31 AC5 13 SER A 136 ? SER X 136 . ? 1_555 ? 32 AC5 13 ARG A 137 ? ARG X 137 . ? 1_555 ? 33 AC5 13 TRP A 138 ? TRP X 138 . ? 1_555 ? 34 AC5 13 HOH M . ? HOH X 1025 . ? 2_654 ? 35 AC5 13 HOH M . ? HOH X 1105 . ? 1_555 ? 36 AC6 5 THR A 34 ? THR X 34 . ? 1_555 ? 37 AC6 5 SER A 36 ? SER X 36 . ? 1_555 ? 38 AC6 5 GLU A 45 ? GLU X 45 . ? 1_555 ? 39 AC6 5 ASN A 116 ? ASN X 116 . ? 3_665 ? 40 AC6 5 HOH M . ? HOH X 1098 . ? 1_555 ? 41 AC7 7 GLN A 69 ? GLN X 69 . ? 1_555 ? 42 AC7 7 ASP A 72 ? ASP X 72 . ? 1_555 ? 43 AC7 7 ARG A 96 ? ARG X 96 . ? 5_555 ? 44 AC7 7 ASN A 140 ? ASN X 140 . ? 3_665 ? 45 AC7 7 HOH M . ? HOH X 960 . ? 3_665 ? 46 AC7 7 HOH M . ? HOH X 1027 . ? 1_555 ? 47 AC7 7 HOH M . ? HOH X 1121 . ? 1_555 ? 48 AC8 5 ASN A 81 ? ASN X 81 . ? 1_555 ? 49 AC8 5 LYS A 83 ? LYS X 83 . ? 1_555 ? 50 AC8 5 THR A 115 ? THR X 115 . ? 1_555 ? 51 AC8 5 LEU A 118 ? LEU X 118 . ? 1_555 ? 52 AC8 5 HOH M . ? HOH X 1147 . ? 1_555 ? 53 AC9 9 GLU A 22 ? GLU X 22 . ? 1_555 ? 54 AC9 9 LYS A 35 ? LYS X 35 . ? 1_555 ? 55 AC9 9 GLN A 105 ? GLN X 105 . ? 1_555 ? 56 AC9 9 THR A 109 ? THR X 109 . ? 1_555 ? 57 AC9 9 ARG A 137 ? ARG X 137 . ? 1_555 ? 58 AC9 9 HOH M . ? HOH X 919 . ? 1_555 ? 59 AC9 9 HOH M . ? HOH X 985 . ? 1_555 ? 60 AC9 9 HOH M . ? HOH X 1067 . ? 1_555 ? 61 AC9 9 HOH M . ? HOH X 1105 . ? 1_555 ? 62 BC1 6 GLY A 30 ? GLY X 30 . ? 1_555 ? 63 BC1 6 LEU A 32 ? LEU X 32 . ? 1_555 ? 64 BC1 6 ASP A 70 ? ASP X 70 . ? 1_555 ? 65 BC1 6 PHE A 104 ? PHE X 104 . ? 1_555 ? 66 BC1 6 GLY A 107 ? GLY X 107 . ? 1_555 ? 67 BC1 6 HOH M . ? HOH X 1096 . ? 1_555 ? 68 BC2 3 ASN A 68 ? ASN X 68 . ? 5_555 ? 69 BC2 3 ASP A 72 ? ASP X 72 . ? 5_555 ? 70 BC2 3 ILE A 100 ? ILE X 100 . ? 1_555 ? # _database_PDB_matrix.entry_id 3DKE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DKE _atom_sites.fract_transf_matrix[1][1] 0.016604 _atom_sites.fract_transf_matrix[1][2] 0.009586 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019173 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010344 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL K N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE X . n A 1 2 ASN 2 2 2 ASN ASN X . n A 1 3 ILE 3 3 3 ILE ILE X . n A 1 4 PHE 4 4 4 PHE PHE X . n A 1 5 GLU 5 5 5 GLU GLU X . n A 1 6 MSE 6 6 6 MSE MSE X . n A 1 7 LEU 7 7 7 LEU LEU X . n A 1 8 ARG 8 8 8 ARG ARG X . n A 1 9 ILE 9 9 9 ILE ILE X . n A 1 10 ASP 10 10 10 ASP ASP X . n A 1 11 GLU 11 11 11 GLU GLU X . n A 1 12 GLY 12 12 12 GLY GLY X . n A 1 13 LEU 13 13 13 LEU LEU X . n A 1 14 ARG 14 14 14 ARG ARG X . n A 1 15 LEU 15 15 15 LEU LEU X . n A 1 16 LYS 16 16 16 LYS LYS X . n A 1 17 ILE 17 17 17 ILE ILE X . n A 1 18 TYR 18 18 18 TYR TYR X . n A 1 19 LYS 19 19 19 LYS LYS X . n A 1 20 ASP 20 20 20 ASP ASP X . n A 1 21 THR 21 21 21 THR THR X . n A 1 22 GLU 22 22 22 GLU GLU X . n A 1 23 GLY 23 23 23 GLY GLY X . n A 1 24 TYR 24 24 24 TYR TYR X . n A 1 25 TYR 25 25 25 TYR TYR X . n A 1 26 THR 26 26 26 THR THR X . n A 1 27 ILE 27 27 27 ILE ILE X . n A 1 28 GLY 28 28 28 GLY GLY X . n A 1 29 ILE 29 29 29 ILE ILE X . n A 1 30 GLY 30 30 30 GLY GLY X . n A 1 31 HIS 31 31 31 HIS HIS X . n A 1 32 LEU 32 32 32 LEU LEU X . n A 1 33 LEU 33 33 33 LEU LEU X . n A 1 34 THR 34 34 34 THR THR X . n A 1 35 LYS 35 35 35 LYS LYS X . n A 1 36 SER 36 36 36 SER SER X . n A 1 37 PRO 37 37 37 PRO PRO X . n A 1 38 SER 38 38 38 SER SER X . n A 1 39 LEU 39 39 39 LEU LEU X . n A 1 40 ASN 40 40 40 ASN ASN X . n A 1 41 ALA 41 41 41 ALA ALA X . n A 1 42 ALA 42 42 42 ALA ALA X . n A 1 43 LYS 43 43 43 LYS LYS X . n A 1 44 SER 44 44 44 SER SER X . n A 1 45 GLU 45 45 45 GLU GLU X . n A 1 46 LEU 46 46 46 LEU LEU X . n A 1 47 ASP 47 47 47 ASP ASP X . n A 1 48 LYS 48 48 48 LYS LYS X . n A 1 49 ALA 49 49 49 ALA ALA X . n A 1 50 ILE 50 50 50 ILE ILE X . n A 1 51 GLY 51 51 51 GLY GLY X . n A 1 52 ARG 52 52 52 ARG ARG X . n A 1 53 ASN 53 53 53 ASN ASN X . n A 1 54 THR 54 54 54 THR THR X . n A 1 55 ASN 55 55 55 ASN ASN X . n A 1 56 GLY 56 56 56 GLY GLY X . n A 1 57 VAL 57 57 57 VAL VAL X . n A 1 58 ILE 58 58 58 ILE ILE X . n A 1 59 THR 59 59 59 THR THR X . n A 1 60 LYS 60 60 60 LYS LYS X . n A 1 61 ASP 61 61 61 ASP ASP X . n A 1 62 GLU 62 62 62 GLU GLU X . n A 1 63 ALA 63 63 63 ALA ALA X . n A 1 64 GLU 64 64 64 GLU GLU X . n A 1 65 LYS 65 65 65 LYS LYS X . n A 1 66 LEU 66 66 66 LEU LEU X . n A 1 67 PHE 67 67 67 PHE PHE X . n A 1 68 ASN 68 68 68 ASN ASN X . n A 1 69 GLN 69 69 69 GLN GLN X . n A 1 70 ASP 70 70 70 ASP ASP X . n A 1 71 VAL 71 71 71 VAL VAL X . n A 1 72 ASP 72 72 72 ASP ASP X . n A 1 73 ALA 73 73 73 ALA ALA X . n A 1 74 ALA 74 74 74 ALA ALA X . n A 1 75 VAL 75 75 75 VAL VAL X . n A 1 76 ARG 76 76 76 ARG ARG X . n A 1 77 GLY 77 77 77 GLY GLY X . n A 1 78 ILE 78 78 78 ILE ILE X . n A 1 79 LEU 79 79 79 LEU LEU X . n A 1 80 ARG 80 80 80 ARG ARG X . n A 1 81 ASN 81 81 81 ASN ASN X . n A 1 82 ALA 82 82 82 ALA ALA X . n A 1 83 LYS 83 83 83 LYS LYS X . n A 1 84 LEU 84 84 84 LEU LEU X . n A 1 85 LYS 85 85 85 LYS LYS X . n A 1 86 PRO 86 86 86 PRO PRO X . n A 1 87 VAL 87 87 87 VAL VAL X . n A 1 88 TYR 88 88 88 TYR TYR X . n A 1 89 ASP 89 89 89 ASP ASP X . n A 1 90 SER 90 90 90 SER SER X . n A 1 91 LEU 91 91 91 LEU LEU X . n A 1 92 ASP 92 92 92 ASP ASP X . n A 1 93 ALA 93 93 93 ALA ALA X . n A 1 94 VAL 94 94 94 VAL VAL X . n A 1 95 ARG 95 95 95 ARG ARG X . n A 1 96 ARG 96 96 96 ARG ARG X . n A 1 97 ALA 97 97 97 ALA ALA X . n A 1 98 ALA 98 98 98 ALA ALA X . n A 1 99 ALA 99 99 99 ALA ALA X . n A 1 100 ILE 100 100 100 ILE ILE X . n A 1 101 ASN 101 101 101 ASN ASN X . n A 1 102 LEU 102 102 102 LEU LEU X . n A 1 103 VAL 103 103 103 VAL VAL X . n A 1 104 PHE 104 104 104 PHE PHE X . n A 1 105 GLN 105 105 105 GLN GLN X . n A 1 106 MSE 106 106 106 MSE MSE X . n A 1 107 GLY 107 107 107 GLY GLY X . n A 1 108 GLU 108 108 108 GLU GLU X . n A 1 109 THR 109 109 109 THR THR X . n A 1 110 GLY 110 110 110 GLY GLY X . n A 1 111 VAL 111 111 111 VAL VAL X . n A 1 112 ALA 112 112 112 ALA ALA X . n A 1 113 GLY 113 113 113 GLY GLY X . n A 1 114 PHE 114 114 114 PHE PHE X . n A 1 115 THR 115 115 115 THR THR X . n A 1 116 ASN 116 116 116 ASN ASN X . n A 1 117 SER 117 117 117 SER SER X . n A 1 118 LEU 118 118 118 LEU LEU X . n A 1 119 ARG 119 119 119 ARG ARG X . n A 1 120 MSE 120 120 120 MSE MSE X . n A 1 121 LEU 121 121 121 LEU LEU X . n A 1 122 GLN 122 122 122 GLN GLN X . n A 1 123 GLN 123 123 123 GLN GLN X . n A 1 124 LYS 124 124 124 LYS LYS X . n A 1 125 ARG 125 125 125 ARG ARG X . n A 1 126 TRP 126 126 126 TRP TRP X . n A 1 127 ASP 127 127 127 ASP ASP X . n A 1 128 GLU 128 128 128 GLU GLU X . n A 1 129 ALA 129 129 129 ALA ALA X . n A 1 130 ALA 130 130 130 ALA ALA X . n A 1 131 VAL 131 131 131 VAL VAL X . n A 1 132 ASN 132 132 132 ASN ASN X . n A 1 133 LEU 133 133 133 LEU LEU X . n A 1 134 ALA 134 134 134 ALA ALA X . n A 1 135 LYS 135 135 135 LYS LYS X . n A 1 136 SER 136 136 136 SER SER X . n A 1 137 ARG 137 137 137 ARG ARG X . n A 1 138 TRP 138 138 138 TRP TRP X . n A 1 139 TYR 139 139 139 TYR TYR X . n A 1 140 ASN 140 140 140 ASN ASN X . n A 1 141 GLN 141 141 141 GLN GLN X . n A 1 142 THR 142 142 142 THR THR X . n A 1 143 PRO 143 143 143 PRO PRO X . n A 1 144 ASN 144 144 144 ASN ASN X . n A 1 145 ARG 145 145 145 ARG ARG X . n A 1 146 ALA 146 146 146 ALA ALA X . n A 1 147 LYS 147 147 147 LYS LYS X . n A 1 148 ARG 148 148 148 ARG ARG X . n A 1 149 VAL 149 149 149 VAL VAL X . n A 1 150 ILE 150 150 150 ILE ILE X . n A 1 151 THR 151 151 151 THR THR X . n A 1 152 THR 152 152 152 THR THR X . n A 1 153 PHE 153 153 153 PHE PHE X . n A 1 154 ARG 154 154 154 ARG ARG X . n A 1 155 THR 155 155 155 THR THR X . n A 1 156 GLY 156 156 156 GLY GLY X . n A 1 157 THR 157 157 157 THR THR X . n A 1 158 TRP 158 158 158 TRP TRP X . n A 1 159 ASP 159 159 159 ASP ASP X . n A 1 160 ALA 160 160 160 ALA ALA X . n A 1 161 TYR 161 161 161 TYR TYR X . n A 1 162 LYS 162 162 162 LYS LYS X . n A 1 163 ASN 163 163 163 ASN ASN X . n A 1 164 LEU 164 164 164 LEU LEU X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 601 601 K K X . C 3 CL 1 701 701 CL CL X . D 3 CL 1 702 702 CL CL X . E 4 AZI 1 401 401 AZI AZI X . F 5 EPE 1 901 901 EPE EPE X . G 6 BME 1 805 805 BME BME X . H 6 BME 1 806 806 BME BME X . I 7 HED 1 801 801 HED HED X . J 7 HED 1 802 802 HED HED X . K 8 GOL 1 501 501 GOL GOL X . L 8 GOL 1 502 502 GOL GOL X . M 9 HOH 1 902 902 HOH HOH X . M 9 HOH 2 903 903 HOH HOH X . M 9 HOH 3 904 904 HOH HOH X . M 9 HOH 4 905 905 HOH HOH X . M 9 HOH 5 906 906 HOH HOH X . M 9 HOH 6 907 907 HOH HOH X . M 9 HOH 7 908 908 HOH HOH X . M 9 HOH 8 909 909 HOH HOH X . M 9 HOH 9 910 910 HOH HOH X . M 9 HOH 10 911 911 HOH HOH X . M 9 HOH 11 912 912 HOH HOH X . M 9 HOH 12 913 913 HOH HOH X . M 9 HOH 13 914 914 HOH HOH X . M 9 HOH 14 915 915 HOH HOH X . M 9 HOH 15 916 916 HOH HOH X . M 9 HOH 16 917 917 HOH HOH X . M 9 HOH 17 918 918 HOH HOH X . M 9 HOH 18 919 919 HOH HOH X . M 9 HOH 19 920 920 HOH HOH X . M 9 HOH 20 921 921 HOH HOH X . M 9 HOH 21 922 922 HOH HOH X . M 9 HOH 22 923 923 HOH HOH X . M 9 HOH 23 924 924 HOH HOH X . M 9 HOH 24 925 925 HOH HOH X . M 9 HOH 25 926 926 HOH HOH X . M 9 HOH 26 927 927 HOH HOH X . M 9 HOH 27 928 928 HOH HOH X . M 9 HOH 28 929 929 HOH HOH X . M 9 HOH 29 930 930 HOH HOH X . M 9 HOH 30 931 931 HOH HOH X . M 9 HOH 31 932 932 HOH HOH X . M 9 HOH 32 933 933 HOH HOH X . M 9 HOH 33 934 934 HOH HOH X . M 9 HOH 34 935 935 HOH HOH X . M 9 HOH 35 936 936 HOH HOH X . M 9 HOH 36 937 937 HOH HOH X . M 9 HOH 37 938 938 HOH HOH X . M 9 HOH 38 939 939 HOH HOH X . M 9 HOH 39 940 940 HOH HOH X . M 9 HOH 40 941 941 HOH HOH X . M 9 HOH 41 942 942 HOH HOH X . M 9 HOH 42 943 943 HOH HOH X . M 9 HOH 43 944 944 HOH HOH X . M 9 HOH 44 945 945 HOH HOH X . M 9 HOH 45 946 946 HOH HOH X . M 9 HOH 46 947 947 HOH HOH X . M 9 HOH 47 948 948 HOH HOH X . M 9 HOH 48 949 949 HOH HOH X . M 9 HOH 49 950 950 HOH HOH X . M 9 HOH 50 951 951 HOH HOH X . M 9 HOH 51 952 952 HOH HOH X . M 9 HOH 52 953 953 HOH HOH X . M 9 HOH 53 954 954 HOH HOH X . M 9 HOH 54 955 955 HOH HOH X . M 9 HOH 55 956 956 HOH HOH X . M 9 HOH 56 957 957 HOH HOH X . M 9 HOH 57 958 958 HOH HOH X . M 9 HOH 58 959 959 HOH HOH X . M 9 HOH 59 960 960 HOH HOH X . M 9 HOH 60 961 961 HOH HOH X . M 9 HOH 61 962 962 HOH HOH X . M 9 HOH 62 963 963 HOH HOH X . M 9 HOH 63 964 964 HOH HOH X . M 9 HOH 64 965 965 HOH HOH X . M 9 HOH 65 966 966 HOH HOH X . M 9 HOH 66 967 967 HOH HOH X . M 9 HOH 67 968 968 HOH HOH X . M 9 HOH 68 969 969 HOH HOH X . M 9 HOH 69 970 970 HOH HOH X . M 9 HOH 70 971 971 HOH HOH X . M 9 HOH 71 972 972 HOH HOH X . M 9 HOH 72 973 973 HOH HOH X . M 9 HOH 73 974 974 HOH HOH X . M 9 HOH 74 975 975 HOH HOH X . M 9 HOH 75 976 976 HOH HOH X . M 9 HOH 76 977 977 HOH HOH X . M 9 HOH 77 978 978 HOH HOH X . M 9 HOH 78 979 979 HOH HOH X . M 9 HOH 79 980 980 HOH HOH X . M 9 HOH 80 981 981 HOH HOH X . M 9 HOH 81 982 982 HOH HOH X . M 9 HOH 82 983 983 HOH HOH X . M 9 HOH 83 984 984 HOH HOH X . M 9 HOH 84 985 985 HOH HOH X . M 9 HOH 85 986 986 HOH HOH X . M 9 HOH 86 987 987 HOH HOH X . M 9 HOH 87 988 988 HOH HOH X . M 9 HOH 88 989 989 HOH HOH X . M 9 HOH 89 990 990 HOH HOH X . M 9 HOH 90 991 991 HOH HOH X . M 9 HOH 91 992 992 HOH HOH X . M 9 HOH 92 993 993 HOH HOH X . M 9 HOH 93 994 994 HOH HOH X . M 9 HOH 94 995 995 HOH HOH X . M 9 HOH 95 996 996 HOH HOH X . M 9 HOH 96 997 997 HOH HOH X . M 9 HOH 97 998 998 HOH HOH X . M 9 HOH 98 999 999 HOH HOH X . M 9 HOH 99 1000 1000 HOH HOH X . M 9 HOH 100 1001 1001 HOH HOH X . M 9 HOH 101 1002 1002 HOH HOH X . M 9 HOH 102 1003 1003 HOH HOH X . M 9 HOH 103 1004 1004 HOH HOH X . M 9 HOH 104 1005 1005 HOH HOH X . M 9 HOH 105 1006 1006 HOH HOH X . M 9 HOH 106 1007 1007 HOH HOH X . M 9 HOH 107 1008 1008 HOH HOH X . M 9 HOH 108 1009 1009 HOH HOH X . M 9 HOH 109 1010 1010 HOH HOH X . M 9 HOH 110 1011 1011 HOH HOH X . M 9 HOH 111 1012 1012 HOH HOH X . M 9 HOH 112 1013 1013 HOH HOH X . M 9 HOH 113 1014 1014 HOH HOH X . M 9 HOH 114 1015 1015 HOH HOH X . M 9 HOH 115 1016 1016 HOH HOH X . M 9 HOH 116 1017 1017 HOH HOH X . M 9 HOH 117 1018 1018 HOH HOH X . M 9 HOH 118 1019 1019 HOH HOH X . M 9 HOH 119 1020 1020 HOH HOH X . M 9 HOH 120 1021 1021 HOH HOH X . M 9 HOH 121 1022 1022 HOH HOH X . M 9 HOH 122 1023 1023 HOH HOH X . M 9 HOH 123 1024 1024 HOH HOH X . M 9 HOH 124 1025 1025 HOH HOH X . M 9 HOH 125 1026 1026 HOH HOH X . M 9 HOH 126 1027 1027 HOH HOH X . M 9 HOH 127 1028 1028 HOH HOH X . M 9 HOH 128 1029 1029 HOH HOH X . M 9 HOH 129 1030 1030 HOH HOH X . M 9 HOH 130 1031 1031 HOH HOH X . M 9 HOH 131 1032 1032 HOH HOH X . M 9 HOH 132 1033 1033 HOH HOH X . M 9 HOH 133 1034 1034 HOH HOH X . M 9 HOH 134 1035 1035 HOH HOH X . M 9 HOH 135 1036 1036 HOH HOH X . M 9 HOH 136 1037 1037 HOH HOH X . M 9 HOH 137 1038 1038 HOH HOH X . M 9 HOH 138 1039 1039 HOH HOH X . M 9 HOH 139 1041 1041 HOH HOH X . M 9 HOH 140 1042 1042 HOH HOH X . M 9 HOH 141 1044 1044 HOH HOH X . M 9 HOH 142 1045 1045 HOH HOH X . M 9 HOH 143 1046 1046 HOH HOH X . M 9 HOH 144 1047 1047 HOH HOH X . M 9 HOH 145 1048 1048 HOH HOH X . M 9 HOH 146 1049 1049 HOH HOH X . M 9 HOH 147 1050 1050 HOH HOH X . M 9 HOH 148 1051 1051 HOH HOH X . M 9 HOH 149 1052 1052 HOH HOH X . M 9 HOH 150 1053 1053 HOH HOH X . M 9 HOH 151 1054 1054 HOH HOH X . M 9 HOH 152 1055 1055 HOH HOH X . M 9 HOH 153 1056 1056 HOH HOH X . M 9 HOH 154 1057 1057 HOH HOH X . M 9 HOH 155 1058 1058 HOH HOH X . M 9 HOH 156 1059 1059 HOH HOH X . M 9 HOH 157 1060 1060 HOH HOH X . M 9 HOH 158 1061 1061 HOH HOH X . M 9 HOH 159 1062 1062 HOH HOH X . M 9 HOH 160 1063 1063 HOH HOH X . M 9 HOH 161 1064 1064 HOH HOH X . M 9 HOH 162 1065 1065 HOH HOH X . M 9 HOH 163 1066 1066 HOH HOH X . M 9 HOH 164 1067 1067 HOH HOH X . M 9 HOH 165 1068 1068 HOH HOH X . M 9 HOH 166 1069 1069 HOH HOH X . M 9 HOH 167 1070 1070 HOH HOH X . M 9 HOH 168 1071 1071 HOH HOH X . M 9 HOH 169 1072 1072 HOH HOH X . M 9 HOH 170 1073 1073 HOH HOH X . M 9 HOH 171 1074 1074 HOH HOH X . M 9 HOH 172 1075 1075 HOH HOH X . M 9 HOH 173 1076 1076 HOH HOH X . M 9 HOH 174 1077 1077 HOH HOH X . M 9 HOH 175 1078 1078 HOH HOH X . M 9 HOH 176 1079 1079 HOH HOH X . M 9 HOH 177 1080 1080 HOH HOH X . M 9 HOH 178 1081 1081 HOH HOH X . M 9 HOH 179 1082 1082 HOH HOH X . M 9 HOH 180 1083 1083 HOH HOH X . M 9 HOH 181 1084 1084 HOH HOH X . M 9 HOH 182 1085 1085 HOH HOH X . M 9 HOH 183 1086 1086 HOH HOH X . M 9 HOH 184 1087 1087 HOH HOH X . M 9 HOH 185 1088 1088 HOH HOH X . M 9 HOH 186 1089 1089 HOH HOH X . M 9 HOH 187 1090 1090 HOH HOH X . M 9 HOH 188 1091 1091 HOH HOH X . M 9 HOH 189 1092 1092 HOH HOH X . M 9 HOH 190 1093 1093 HOH HOH X . M 9 HOH 191 1094 1094 HOH HOH X . M 9 HOH 192 1095 1095 HOH HOH X . M 9 HOH 193 1096 1096 HOH HOH X . M 9 HOH 194 1097 1097 HOH HOH X . M 9 HOH 195 1098 1098 HOH HOH X . M 9 HOH 196 1099 1099 HOH HOH X . M 9 HOH 197 1100 1100 HOH HOH X . M 9 HOH 198 1101 1101 HOH HOH X . M 9 HOH 199 1102 1102 HOH HOH X . M 9 HOH 200 1103 1103 HOH HOH X . M 9 HOH 201 1104 1104 HOH HOH X . M 9 HOH 202 1105 1105 HOH HOH X . M 9 HOH 203 1106 1106 HOH HOH X . M 9 HOH 204 1107 1107 HOH HOH X . M 9 HOH 205 1109 1109 HOH HOH X . M 9 HOH 206 1110 1110 HOH HOH X . M 9 HOH 207 1111 1111 HOH HOH X . M 9 HOH 208 1112 1112 HOH HOH X . M 9 HOH 209 1113 1113 HOH HOH X . M 9 HOH 210 1114 1114 HOH HOH X . M 9 HOH 211 1115 1115 HOH HOH X . M 9 HOH 212 1116 1116 HOH HOH X . M 9 HOH 213 1117 1117 HOH HOH X . M 9 HOH 214 1118 1118 HOH HOH X . M 9 HOH 215 1119 1119 HOH HOH X . M 9 HOH 216 1121 1121 HOH HOH X . M 9 HOH 217 1122 1122 HOH HOH X . M 9 HOH 218 1123 1123 HOH HOH X . M 9 HOH 219 1125 1125 HOH HOH X . M 9 HOH 220 1126 1126 HOH HOH X . M 9 HOH 221 1127 1127 HOH HOH X . M 9 HOH 222 1130 1130 HOH HOH X . M 9 HOH 223 1131 1131 HOH HOH X . M 9 HOH 224 1133 1133 HOH HOH X . M 9 HOH 225 1134 1134 HOH HOH X . M 9 HOH 226 1135 1135 HOH HOH X . M 9 HOH 227 1137 1137 HOH HOH X . M 9 HOH 228 1138 1138 HOH HOH X . M 9 HOH 229 1139 1139 HOH HOH X . M 9 HOH 230 1140 1140 HOH HOH X . M 9 HOH 231 1141 1141 HOH HOH X . M 9 HOH 232 1142 1142 HOH HOH X . M 9 HOH 233 1143 1143 HOH HOH X . M 9 HOH 234 1144 1144 HOH HOH X . M 9 HOH 235 1145 1145 HOH HOH X . M 9 HOH 236 1146 1146 HOH HOH X . M 9 HOH 237 1147 1147 HOH HOH X . M 9 HOH 238 1148 1148 HOH HOH X . M 9 HOH 239 1149 1149 HOH HOH X . M 9 HOH 240 1150 1150 HOH HOH X . M 9 HOH 241 1152 1152 HOH HOH X . M 9 HOH 242 1154 1154 HOH HOH X . M 9 HOH 243 1156 1156 HOH HOH X . M 9 HOH 244 1158 1158 HOH HOH X . M 9 HOH 245 1159 1159 HOH HOH X . M 9 HOH 246 1160 1160 HOH HOH X . M 9 HOH 247 1161 1161 HOH HOH X . M 9 HOH 248 1162 1162 HOH HOH X . M 9 HOH 249 1163 1163 HOH HOH X . M 9 HOH 250 1165 1165 HOH HOH X . M 9 HOH 251 1166 1166 HOH HOH X . M 9 HOH 252 1167 1167 HOH HOH X . M 9 HOH 253 1168 1168 HOH HOH X . M 9 HOH 254 1169 1169 HOH HOH X . M 9 HOH 255 1170 1170 HOH HOH X . M 9 HOH 256 1171 1171 HOH HOH X . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 X MSE 1 ? MET SELENOMETHIONINE 2 A MSE 6 X MSE 6 ? MET SELENOMETHIONINE 3 A MSE 106 X MSE 106 ? MET SELENOMETHIONINE 4 A MSE 120 X MSE 120 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLU 11 ? X GLU 11 ? 1_555 K ? B K . ? X K 601 ? 1_555 OH ? A TYR 18 ? X TYR 18 ? 1_555 86.0 ? 2 O ? A GLU 11 ? X GLU 11 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 906 ? 1_555 131.2 ? 3 OH ? A TYR 18 ? X TYR 18 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 906 ? 1_555 87.7 ? 4 O ? A GLU 11 ? X GLU 11 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 947 ? 1_555 130.5 ? 5 OH ? A TYR 18 ? X TYR 18 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 947 ? 1_555 97.9 ? 6 O ? M HOH . ? X HOH 906 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 947 ? 1_555 98.3 ? 7 O ? A GLU 11 ? X GLU 11 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 956 ? 1_555 86.4 ? 8 OH ? A TYR 18 ? X TYR 18 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 956 ? 1_555 161.3 ? 9 O ? M HOH . ? X HOH 906 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 956 ? 1_555 110.0 ? 10 O ? M HOH . ? X HOH 947 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 956 ? 1_555 74.4 ? 11 O ? A GLU 11 ? X GLU 11 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 1045 ? 1_555 63.8 ? 12 OH ? A TYR 18 ? X TYR 18 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 1045 ? 1_555 76.4 ? 13 O ? M HOH . ? X HOH 906 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 1045 ? 1_555 157.8 ? 14 O ? M HOH . ? X HOH 947 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 1045 ? 1_555 69.3 ? 15 O ? M HOH . ? X HOH 956 ? 1_555 K ? B K . ? X K 601 ? 1_555 O ? M HOH . ? X HOH 1045 ? 1_555 85.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-11-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' entity_src_gen 3 3 'Structure model' pdbx_struct_conn_angle 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 4 3 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.value' 8 3 'Structure model' '_struct_conn.pdbx_dist_value' 9 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_ref_seq_dif.details' 12 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 13 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 14 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 41.6860 5.8740 11.3120 0.0038 -0.0098 -0.0440 -0.0041 0.0049 -0.0007 1.0863 1.0630 3.3799 -0.1290 0.7580 1.6234 -0.0217 -0.1132 -0.0189 0.1948 0.0917 -0.0892 0.0380 0.1214 -0.0700 'X-RAY DIFFRACTION' 2 ? refined 39.9220 21.4310 21.5610 0.0109 -0.0096 -0.0457 -0.0047 0.0070 -0.0103 0.9576 1.0037 1.6309 0.1512 -0.3643 0.1170 0.0124 -0.0288 0.0552 0.0534 0.0296 0.0246 -0.1042 0.0611 -0.0420 'X-RAY DIFFRACTION' 3 ? refined 35.8620 8.4970 20.9770 0.0226 -0.0182 -0.0416 0.0050 0.0145 0.0003 5.4023 1.7331 3.0208 0.8752 1.8087 0.8838 -0.0284 -0.0484 -0.0399 0.0451 0.0073 0.0580 0.0557 -0.0247 0.0212 'X-RAY DIFFRACTION' 4 ? refined 21.8140 6.2310 12.0020 -0.0157 0.0275 -0.0234 0.0026 0.0142 -0.0174 9.4172 2.6316 11.4978 1.8573 6.8078 2.2050 -0.1344 -0.4553 0.0882 0.0098 -0.0736 0.1425 -0.2209 -0.6851 0.2081 'X-RAY DIFFRACTION' 5 ? refined 29.2480 3.2600 6.1050 0.0130 -0.0011 -0.0348 -0.0102 -0.0011 0.0086 1.4516 1.6568 0.7040 0.9028 0.6679 0.9614 0.0509 -0.0956 -0.0324 0.0579 -0.0346 0.0155 0.0192 -0.0529 -0.0163 'X-RAY DIFFRACTION' 6 ? refined 24.3860 10.5360 0.5690 0.0141 -0.0042 -0.0302 -0.0119 0.0163 0.0195 1.3317 1.6367 2.2770 0.1110 1.0362 1.3535 -0.0587 -0.1046 0.0825 0.1017 -0.0288 0.2744 -0.0165 -0.1773 0.0874 'X-RAY DIFFRACTION' 7 ? refined 34.4500 10.3890 -3.5740 0.0167 -0.0012 -0.0352 -0.0224 -0.0024 -0.0001 0.5261 0.6959 0.5496 0.3302 0.3437 0.0458 -0.0236 0.0506 -0.0136 -0.0972 0.0320 -0.0197 -0.0196 0.0153 -0.0084 'X-RAY DIFFRACTION' 8 ? refined 41.2980 0.5080 0.0610 -0.0098 -0.0150 -0.0394 -0.0071 0.0071 -0.0170 3.8798 7.8753 2.6194 0.5820 1.5560 0.9994 0.0586 0.1075 -0.2443 -0.1289 0.1023 -0.2514 0.1167 0.2142 -0.1609 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 X 1 A 1 X 12 A 12 ? 'X-RAY DIFFRACTION' ? 2 2 X 13 A 13 X 62 A 62 ? 'X-RAY DIFFRACTION' ? 3 3 X 63 A 63 X 73 A 73 ? 'X-RAY DIFFRACTION' ? 4 4 X 74 A 74 X 84 A 84 ? 'X-RAY DIFFRACTION' ? 5 5 X 85 A 85 X 105 A 105 ? 'X-RAY DIFFRACTION' ? 6 6 X 106 A 106 X 123 A 123 ? 'X-RAY DIFFRACTION' ? 7 7 X 124 A 124 X 153 A 153 ? 'X-RAY DIFFRACTION' ? 8 8 X 154 A 154 X 164 A 164 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 MLPHARE phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O1S _pdbx_validate_close_contact.auth_asym_id_1 X _pdbx_validate_close_contact.auth_comp_id_1 EPE _pdbx_validate_close_contact.auth_seq_id_1 901 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 X _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1105 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.01 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ILE _pdbx_validate_torsion.auth_asym_id X _pdbx_validate_torsion.auth_seq_id 29 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -109.40 _pdbx_validate_torsion.psi 77.26 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'CHLORIDE ION' CL 4 'AZIDE ION' AZI 5 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 6 BETA-MERCAPTOETHANOL BME 7 '2-HYDROXYETHYL DISULFIDE' HED 8 GLYCEROL GOL 9 water HOH #