data_3DNK # _entry.id 3DNK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DNK pdb_00003dnk 10.2210/pdb3dnk/pdb RCSB RCSB048258 ? ? WWPDB D_1000048258 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-07-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' pdbx_entry_details 6 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DNK _pdbx_database_status.recvd_initial_deposition_date 2008-07-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2hwz _pdbx_database_related.details 'Humanized anti-viral IgG1 Fab fragment' _pdbx_database_related.content_type unspecified # _audit_author.name 'Braden, B.C.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title '2.8 Angstrom structure of a enzyme deglycosylated human IgG1 Fc fragment' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Braden, B.C.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'IGHM protein' 24008.123 2 ? N328D 'UNP residues 267-478' ? 2 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Human IgG1 antibody Fc fragment-deglycosylated' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYDSTYRVVSVLTVLHQDWLN GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; _entity_poly.pdbx_seq_one_letter_code_can ;GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYDSTYRVVSVLTVLHQDWLN GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 PRO n 1 4 SER n 1 5 VAL n 1 6 PHE n 1 7 LEU n 1 8 PHE n 1 9 PRO n 1 10 PRO n 1 11 LYS n 1 12 PRO n 1 13 LYS n 1 14 ASP n 1 15 THR n 1 16 LEU n 1 17 MET n 1 18 ILE n 1 19 SER n 1 20 ARG n 1 21 THR n 1 22 PRO n 1 23 GLU n 1 24 VAL n 1 25 THR n 1 26 CYS n 1 27 VAL n 1 28 VAL n 1 29 VAL n 1 30 ASP n 1 31 VAL n 1 32 SER n 1 33 HIS n 1 34 GLU n 1 35 ASP n 1 36 PRO n 1 37 GLU n 1 38 VAL n 1 39 LYS n 1 40 PHE n 1 41 ASN n 1 42 TRP n 1 43 TYR n 1 44 VAL n 1 45 ASP n 1 46 GLY n 1 47 VAL n 1 48 GLU n 1 49 VAL n 1 50 HIS n 1 51 ASN n 1 52 ALA n 1 53 LYS n 1 54 THR n 1 55 LYS n 1 56 PRO n 1 57 ARG n 1 58 GLU n 1 59 GLU n 1 60 GLN n 1 61 TYR n 1 62 ASP n 1 63 SER n 1 64 THR n 1 65 TYR n 1 66 ARG n 1 67 VAL n 1 68 VAL n 1 69 SER n 1 70 VAL n 1 71 LEU n 1 72 THR n 1 73 VAL n 1 74 LEU n 1 75 HIS n 1 76 GLN n 1 77 ASP n 1 78 TRP n 1 79 LEU n 1 80 ASN n 1 81 GLY n 1 82 LYS n 1 83 GLU n 1 84 TYR n 1 85 LYS n 1 86 CYS n 1 87 LYS n 1 88 VAL n 1 89 SER n 1 90 ASN n 1 91 LYS n 1 92 ALA n 1 93 LEU n 1 94 PRO n 1 95 ALA n 1 96 PRO n 1 97 ILE n 1 98 GLU n 1 99 LYS n 1 100 THR n 1 101 ILE n 1 102 SER n 1 103 LYS n 1 104 ALA n 1 105 LYS n 1 106 GLY n 1 107 GLN n 1 108 PRO n 1 109 ARG n 1 110 GLU n 1 111 PRO n 1 112 GLN n 1 113 VAL n 1 114 TYR n 1 115 THR n 1 116 LEU n 1 117 PRO n 1 118 PRO n 1 119 SER n 1 120 ARG n 1 121 GLU n 1 122 GLU n 1 123 MET n 1 124 THR n 1 125 LYS n 1 126 ASN n 1 127 GLN n 1 128 VAL n 1 129 SER n 1 130 LEU n 1 131 THR n 1 132 CYS n 1 133 LEU n 1 134 VAL n 1 135 LYS n 1 136 GLY n 1 137 PHE n 1 138 TYR n 1 139 PRO n 1 140 SER n 1 141 ASP n 1 142 ILE n 1 143 ALA n 1 144 VAL n 1 145 GLU n 1 146 TRP n 1 147 GLU n 1 148 SER n 1 149 ASN n 1 150 GLY n 1 151 GLN n 1 152 PRO n 1 153 GLU n 1 154 ASN n 1 155 ASN n 1 156 TYR n 1 157 LYS n 1 158 THR n 1 159 THR n 1 160 PRO n 1 161 PRO n 1 162 VAL n 1 163 LEU n 1 164 ASP n 1 165 SER n 1 166 ASP n 1 167 GLY n 1 168 SER n 1 169 PHE n 1 170 PHE n 1 171 LEU n 1 172 TYR n 1 173 SER n 1 174 LYS n 1 175 LEU n 1 176 THR n 1 177 VAL n 1 178 ASP n 1 179 LYS n 1 180 SER n 1 181 ARG n 1 182 TRP n 1 183 GLN n 1 184 GLN n 1 185 GLY n 1 186 ASN n 1 187 VAL n 1 188 PHE n 1 189 SER n 1 190 CYS n 1 191 SER n 1 192 VAL n 1 193 MET n 1 194 HIS n 1 195 GLU n 1 196 ALA n 1 197 LEU n 1 198 HIS n 1 199 ASN n 1 200 HIS n 1 201 TYR n 1 202 THR n 1 203 GLN n 1 204 LYS n 1 205 SER n 1 206 LEU n 1 207 SER n 1 208 LEU n 1 209 SER n 1 210 PRO n 1 211 GLY n 1 212 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name man _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene IGHM _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'mus musculus' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10090 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'mouse NSO cells' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ;Intact, humanized IgG1 Medi-524 produced in hybridomas. Fc fragment produced by papain digestion ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 236 236 GLY GLY A . n A 1 2 GLY 2 237 237 GLY GLY A . n A 1 3 PRO 3 238 238 PRO PRO A . n A 1 4 SER 4 239 239 SER SER A . n A 1 5 VAL 5 240 240 VAL VAL A . n A 1 6 PHE 6 241 241 PHE PHE A . n A 1 7 LEU 7 242 242 LEU LEU A . n A 1 8 PHE 8 243 243 PHE PHE A . n A 1 9 PRO 9 244 244 PRO PRO A . n A 1 10 PRO 10 245 245 PRO PRO A . n A 1 11 LYS 11 246 246 LYS LYS A . n A 1 12 PRO 12 247 247 PRO PRO A . n A 1 13 LYS 13 248 248 LYS LYS A . n A 1 14 ASP 14 249 249 ASP ASP A . n A 1 15 THR 15 250 250 THR THR A . n A 1 16 LEU 16 251 251 LEU LEU A . n A 1 17 MET 17 252 252 MET MET A . n A 1 18 ILE 18 253 253 ILE ILE A . n A 1 19 SER 19 254 254 SER SER A . n A 1 20 ARG 20 255 255 ARG ARG A . n A 1 21 THR 21 256 256 THR THR A . n A 1 22 PRO 22 257 257 PRO PRO A . n A 1 23 GLU 23 258 258 GLU GLU A . n A 1 24 VAL 24 259 259 VAL VAL A . n A 1 25 THR 25 260 260 THR THR A . n A 1 26 CYS 26 261 261 CYS CYS A . n A 1 27 VAL 27 262 262 VAL VAL A . n A 1 28 VAL 28 263 263 VAL VAL A . n A 1 29 VAL 29 264 264 VAL VAL A . n A 1 30 ASP 30 265 265 ASP ASP A . n A 1 31 VAL 31 266 266 VAL VAL A . n A 1 32 SER 32 267 267 SER SER A . n A 1 33 HIS 33 268 268 HIS HIS A . n A 1 34 GLU 34 269 269 GLU GLU A . n A 1 35 ASP 35 270 270 ASP ASP A . n A 1 36 PRO 36 271 271 PRO PRO A . n A 1 37 GLU 37 272 272 GLU GLU A . n A 1 38 VAL 38 273 273 VAL VAL A . n A 1 39 LYS 39 274 274 LYS LYS A . n A 1 40 PHE 40 275 275 PHE PHE A . n A 1 41 ASN 41 276 276 ASN ASN A . n A 1 42 TRP 42 277 277 TRP TRP A . n A 1 43 TYR 43 278 278 TYR TYR A . n A 1 44 VAL 44 279 279 VAL VAL A . n A 1 45 ASP 45 280 280 ASP ASP A . n A 1 46 GLY 46 281 281 GLY GLY A . n A 1 47 VAL 47 282 282 VAL VAL A . n A 1 48 GLU 48 283 283 GLU GLU A . n A 1 49 VAL 49 284 284 VAL VAL A . n A 1 50 HIS 50 285 285 HIS HIS A . n A 1 51 ASN 51 286 286 ASN ASN A . n A 1 52 ALA 52 287 287 ALA ALA A . n A 1 53 LYS 53 288 288 LYS LYS A . n A 1 54 THR 54 289 289 THR THR A . n A 1 55 LYS 55 290 290 LYS LYS A . n A 1 56 PRO 56 291 291 PRO PRO A . n A 1 57 ARG 57 292 292 ARG ARG A . n A 1 58 GLU 58 293 293 GLU GLU A . n A 1 59 GLU 59 294 294 GLU GLU A . n A 1 60 GLN 60 295 295 GLN GLN A . n A 1 61 TYR 61 296 296 TYR TYR A . n A 1 62 ASP 62 297 297 ASP ASP A . n A 1 63 SER 63 298 298 SER SER A . n A 1 64 THR 64 299 299 THR THR A . n A 1 65 TYR 65 300 300 TYR TYR A . n A 1 66 ARG 66 301 301 ARG ARG A . n A 1 67 VAL 67 302 302 VAL VAL A . n A 1 68 VAL 68 303 303 VAL VAL A . n A 1 69 SER 69 304 304 SER SER A . n A 1 70 VAL 70 305 305 VAL VAL A . n A 1 71 LEU 71 306 306 LEU LEU A . n A 1 72 THR 72 307 307 THR THR A . n A 1 73 VAL 73 308 308 VAL VAL A . n A 1 74 LEU 74 309 309 LEU LEU A . n A 1 75 HIS 75 310 310 HIS HIS A . n A 1 76 GLN 76 311 311 GLN GLN A . n A 1 77 ASP 77 312 312 ASP ASP A . n A 1 78 TRP 78 313 313 TRP TRP A . n A 1 79 LEU 79 314 314 LEU LEU A . n A 1 80 ASN 80 315 315 ASN ASN A . n A 1 81 GLY 81 316 316 GLY GLY A . n A 1 82 LYS 82 317 317 LYS LYS A . n A 1 83 GLU 83 318 318 GLU GLU A . n A 1 84 TYR 84 319 319 TYR TYR A . n A 1 85 LYS 85 320 320 LYS LYS A . n A 1 86 CYS 86 321 321 CYS CYS A . n A 1 87 LYS 87 322 322 LYS LYS A . n A 1 88 VAL 88 323 323 VAL VAL A . n A 1 89 SER 89 324 324 SER SER A . n A 1 90 ASN 90 325 325 ASN ASN A . n A 1 91 LYS 91 326 326 LYS LYS A . n A 1 92 ALA 92 327 327 ALA ALA A . n A 1 93 LEU 93 328 328 LEU LEU A . n A 1 94 PRO 94 329 329 PRO PRO A . n A 1 95 ALA 95 330 330 ALA ALA A . n A 1 96 PRO 96 331 331 PRO PRO A . n A 1 97 ILE 97 332 332 ILE ILE A . n A 1 98 GLU 98 333 333 GLU GLU A . n A 1 99 LYS 99 334 334 LYS LYS A . n A 1 100 THR 100 335 335 THR THR A . n A 1 101 ILE 101 336 336 ILE ILE A . n A 1 102 SER 102 337 337 SER SER A . n A 1 103 LYS 103 338 338 LYS LYS A . n A 1 104 ALA 104 339 339 ALA ALA A . n A 1 105 LYS 105 340 340 LYS LYS A . n A 1 106 GLY 106 341 341 GLY GLY A . n A 1 107 GLN 107 342 342 GLN GLN A . n A 1 108 PRO 108 343 343 PRO PRO A . n A 1 109 ARG 109 344 344 ARG ARG A . n A 1 110 GLU 110 345 345 GLU GLU A . n A 1 111 PRO 111 346 346 PRO PRO A . n A 1 112 GLN 112 347 347 GLN GLN A . n A 1 113 VAL 113 348 348 VAL VAL A . n A 1 114 TYR 114 349 349 TYR TYR A . n A 1 115 THR 115 350 350 THR THR A . n A 1 116 LEU 116 351 351 LEU LEU A . n A 1 117 PRO 117 352 352 PRO PRO A . n A 1 118 PRO 118 353 353 PRO PRO A . n A 1 119 SER 119 354 354 SER SER A . n A 1 120 ARG 120 355 355 ARG ARG A . n A 1 121 GLU 121 356 356 GLU GLU A . n A 1 122 GLU 122 357 357 GLU GLU A . n A 1 123 MET 123 358 358 MET MET A . n A 1 124 THR 124 359 359 THR THR A . n A 1 125 LYS 125 360 360 LYS LYS A . n A 1 126 ASN 126 361 361 ASN ASN A . n A 1 127 GLN 127 362 362 GLN GLN A . n A 1 128 VAL 128 363 363 VAL VAL A . n A 1 129 SER 129 364 364 SER SER A . n A 1 130 LEU 130 365 365 LEU LEU A . n A 1 131 THR 131 366 366 THR THR A . n A 1 132 CYS 132 367 367 CYS CYS A . n A 1 133 LEU 133 368 368 LEU LEU A . n A 1 134 VAL 134 369 369 VAL VAL A . n A 1 135 LYS 135 370 370 LYS LYS A . n A 1 136 GLY 136 371 371 GLY GLY A . n A 1 137 PHE 137 372 372 PHE PHE A . n A 1 138 TYR 138 373 373 TYR TYR A . n A 1 139 PRO 139 374 374 PRO PRO A . n A 1 140 SER 140 375 375 SER SER A . n A 1 141 ASP 141 376 376 ASP ASP A . n A 1 142 ILE 142 377 377 ILE ILE A . n A 1 143 ALA 143 378 378 ALA ALA A . n A 1 144 VAL 144 379 379 VAL VAL A . n A 1 145 GLU 145 380 380 GLU GLU A . n A 1 146 TRP 146 381 381 TRP TRP A . n A 1 147 GLU 147 382 382 GLU GLU A . n A 1 148 SER 148 383 383 SER SER A . n A 1 149 ASN 149 384 384 ASN ASN A . n A 1 150 GLY 150 385 385 GLY GLY A . n A 1 151 GLN 151 386 386 GLN GLN A . n A 1 152 PRO 152 387 387 PRO PRO A . n A 1 153 GLU 153 388 388 GLU GLU A . n A 1 154 ASN 154 389 389 ASN ASN A . n A 1 155 ASN 155 390 390 ASN ASN A . n A 1 156 TYR 156 391 391 TYR TYR A . n A 1 157 LYS 157 392 392 LYS LYS A . n A 1 158 THR 158 393 393 THR THR A . n A 1 159 THR 159 394 394 THR THR A . n A 1 160 PRO 160 395 395 PRO PRO A . n A 1 161 PRO 161 396 396 PRO PRO A . n A 1 162 VAL 162 397 397 VAL VAL A . n A 1 163 LEU 163 398 398 LEU LEU A . n A 1 164 ASP 164 399 399 ASP ASP A . n A 1 165 SER 165 400 400 SER SER A . n A 1 166 ASP 166 401 401 ASP ASP A . n A 1 167 GLY 167 402 402 GLY GLY A . n A 1 168 SER 168 403 403 SER SER A . n A 1 169 PHE 169 404 404 PHE PHE A . n A 1 170 PHE 170 405 405 PHE PHE A . n A 1 171 LEU 171 406 406 LEU LEU A . n A 1 172 TYR 172 407 407 TYR TYR A . n A 1 173 SER 173 408 408 SER SER A . n A 1 174 LYS 174 409 409 LYS LYS A . n A 1 175 LEU 175 410 410 LEU LEU A . n A 1 176 THR 176 411 411 THR THR A . n A 1 177 VAL 177 412 412 VAL VAL A . n A 1 178 ASP 178 413 413 ASP ASP A . n A 1 179 LYS 179 414 414 LYS LYS A . n A 1 180 SER 180 415 415 SER SER A . n A 1 181 ARG 181 416 416 ARG ARG A . n A 1 182 TRP 182 417 417 TRP TRP A . n A 1 183 GLN 183 418 418 GLN GLN A . n A 1 184 GLN 184 419 419 GLN GLN A . n A 1 185 GLY 185 420 420 GLY GLY A . n A 1 186 ASN 186 421 421 ASN ASN A . n A 1 187 VAL 187 422 422 VAL VAL A . n A 1 188 PHE 188 423 423 PHE PHE A . n A 1 189 SER 189 424 424 SER SER A . n A 1 190 CYS 190 425 425 CYS CYS A . n A 1 191 SER 191 426 426 SER SER A . n A 1 192 VAL 192 427 427 VAL VAL A . n A 1 193 MET 193 428 428 MET MET A . n A 1 194 HIS 194 429 429 HIS HIS A . n A 1 195 GLU 195 430 430 GLU GLU A . n A 1 196 ALA 196 431 431 ALA ALA A . n A 1 197 LEU 197 432 432 LEU LEU A . n A 1 198 HIS 198 433 433 HIS HIS A . n A 1 199 ASN 199 434 434 ASN ASN A . n A 1 200 HIS 200 435 435 HIS HIS A . n A 1 201 TYR 201 436 436 TYR TYR A . n A 1 202 THR 202 437 437 THR THR A . n A 1 203 GLN 203 438 438 GLN GLN A . n A 1 204 LYS 204 439 439 LYS LYS A . n A 1 205 SER 205 440 440 SER SER A . n A 1 206 LEU 206 441 441 LEU LEU A . n A 1 207 SER 207 442 442 SER SER A . n A 1 208 LEU 208 443 443 LEU LEU A . n A 1 209 SER 209 444 444 SER SER A . n A 1 210 PRO 210 445 ? ? ? A . n A 1 211 GLY 211 446 ? ? ? A . n A 1 212 LYS 212 447 ? ? ? A . n B 1 1 GLY 1 1236 1236 GLY GLY B . n B 1 2 GLY 2 1237 1237 GLY GLY B . n B 1 3 PRO 3 1238 1238 PRO PRO B . n B 1 4 SER 4 1239 1239 SER SER B . n B 1 5 VAL 5 1240 1240 VAL VAL B . n B 1 6 PHE 6 1241 1241 PHE PHE B . n B 1 7 LEU 7 1242 1242 LEU LEU B . n B 1 8 PHE 8 1243 1243 PHE PHE B . n B 1 9 PRO 9 1244 1244 PRO PRO B . n B 1 10 PRO 10 1245 1245 PRO PRO B . n B 1 11 LYS 11 1246 1246 LYS LYS B . n B 1 12 PRO 12 1247 1247 PRO PRO B . n B 1 13 LYS 13 1248 1248 LYS LYS B . n B 1 14 ASP 14 1249 1249 ASP ASP B . n B 1 15 THR 15 1250 1250 THR THR B . n B 1 16 LEU 16 1251 1251 LEU LEU B . n B 1 17 MET 17 1252 1252 MET MET B . n B 1 18 ILE 18 1253 1253 ILE ILE B . n B 1 19 SER 19 1254 1254 SER SER B . n B 1 20 ARG 20 1255 1255 ARG ARG B . n B 1 21 THR 21 1256 1256 THR THR B . n B 1 22 PRO 22 1257 1257 PRO PRO B . n B 1 23 GLU 23 1258 1258 GLU GLU B . n B 1 24 VAL 24 1259 1259 VAL VAL B . n B 1 25 THR 25 1260 1260 THR THR B . n B 1 26 CYS 26 1261 1261 CYS CYS B . n B 1 27 VAL 27 1262 1262 VAL VAL B . n B 1 28 VAL 28 1263 1263 VAL VAL B . n B 1 29 VAL 29 1264 1264 VAL VAL B . n B 1 30 ASP 30 1265 1265 ASP ASP B . n B 1 31 VAL 31 1266 1266 VAL VAL B . n B 1 32 SER 32 1267 1267 SER SER B . n B 1 33 HIS 33 1268 1268 HIS HIS B . n B 1 34 GLU 34 1269 1269 GLU GLU B . n B 1 35 ASP 35 1270 1270 ASP ASP B . n B 1 36 PRO 36 1271 1271 PRO PRO B . n B 1 37 GLU 37 1272 1272 GLU GLU B . n B 1 38 VAL 38 1273 1273 VAL VAL B . n B 1 39 LYS 39 1274 1274 LYS LYS B . n B 1 40 PHE 40 1275 1275 PHE PHE B . n B 1 41 ASN 41 1276 1276 ASN ASN B . n B 1 42 TRP 42 1277 1277 TRP TRP B . n B 1 43 TYR 43 1278 1278 TYR TYR B . n B 1 44 VAL 44 1279 1279 VAL VAL B . n B 1 45 ASP 45 1280 1280 ASP ASP B . n B 1 46 GLY 46 1281 1281 GLY GLY B . n B 1 47 VAL 47 1282 1282 VAL VAL B . n B 1 48 GLU 48 1283 1283 GLU GLU B . n B 1 49 VAL 49 1284 1284 VAL VAL B . n B 1 50 HIS 50 1285 1285 HIS HIS B . n B 1 51 ASN 51 1286 1286 ASN ASN B . n B 1 52 ALA 52 1287 1287 ALA ALA B . n B 1 53 LYS 53 1288 1288 LYS LYS B . n B 1 54 THR 54 1289 1289 THR THR B . n B 1 55 LYS 55 1290 1290 LYS LYS B . n B 1 56 PRO 56 1291 1291 PRO PRO B . n B 1 57 ARG 57 1292 1292 ARG ARG B . n B 1 58 GLU 58 1293 1293 GLU GLU B . n B 1 59 GLU 59 1294 1294 GLU GLU B . n B 1 60 GLN 60 1295 1295 GLN GLN B . n B 1 61 TYR 61 1296 1296 TYR TYR B . n B 1 62 ASP 62 1297 1297 ASP ASP B . n B 1 63 SER 63 1298 1298 SER SER B . n B 1 64 THR 64 1299 1299 THR THR B . n B 1 65 TYR 65 1300 1300 TYR TYR B . n B 1 66 ARG 66 1301 1301 ARG ARG B . n B 1 67 VAL 67 1302 1302 VAL VAL B . n B 1 68 VAL 68 1303 1303 VAL VAL B . n B 1 69 SER 69 1304 1304 SER SER B . n B 1 70 VAL 70 1305 1305 VAL VAL B . n B 1 71 LEU 71 1306 1306 LEU LEU B . n B 1 72 THR 72 1307 1307 THR THR B . n B 1 73 VAL 73 1308 1308 VAL VAL B . n B 1 74 LEU 74 1309 1309 LEU LEU B . n B 1 75 HIS 75 1310 1310 HIS HIS B . n B 1 76 GLN 76 1311 1311 GLN GLN B . n B 1 77 ASP 77 1312 1312 ASP ASP B . n B 1 78 TRP 78 1313 1313 TRP TRP B . n B 1 79 LEU 79 1314 1314 LEU LEU B . n B 1 80 ASN 80 1315 1315 ASN ASN B . n B 1 81 GLY 81 1316 1316 GLY GLY B . n B 1 82 LYS 82 1317 1317 LYS LYS B . n B 1 83 GLU 83 1318 1318 GLU GLU B . n B 1 84 TYR 84 1319 1319 TYR TYR B . n B 1 85 LYS 85 1320 1320 LYS LYS B . n B 1 86 CYS 86 1321 1321 CYS CYS B . n B 1 87 LYS 87 1322 1322 LYS LYS B . n B 1 88 VAL 88 1323 1323 VAL VAL B . n B 1 89 SER 89 1324 1324 SER SER B . n B 1 90 ASN 90 1325 1325 ASN ASN B . n B 1 91 LYS 91 1326 1326 LYS LYS B . n B 1 92 ALA 92 1327 1327 ALA ALA B . n B 1 93 LEU 93 1328 1328 LEU LEU B . n B 1 94 PRO 94 1329 1329 PRO PRO B . n B 1 95 ALA 95 1330 1330 ALA ALA B . n B 1 96 PRO 96 1331 1331 PRO PRO B . n B 1 97 ILE 97 1332 1332 ILE ILE B . n B 1 98 GLU 98 1333 1333 GLU GLU B . n B 1 99 LYS 99 1334 1334 LYS LYS B . n B 1 100 THR 100 1335 1335 THR THR B . n B 1 101 ILE 101 1336 1336 ILE ILE B . n B 1 102 SER 102 1337 1337 SER SER B . n B 1 103 LYS 103 1338 1338 LYS LYS B . n B 1 104 ALA 104 1339 1339 ALA ALA B . n B 1 105 LYS 105 1340 1340 LYS LYS B . n B 1 106 GLY 106 1341 1341 GLY GLY B . n B 1 107 GLN 107 1342 1342 GLN GLN B . n B 1 108 PRO 108 1343 1343 PRO PRO B . n B 1 109 ARG 109 1344 1344 ARG ARG B . n B 1 110 GLU 110 1345 1345 GLU GLU B . n B 1 111 PRO 111 1346 1346 PRO PRO B . n B 1 112 GLN 112 1347 1347 GLN GLN B . n B 1 113 VAL 113 1348 1348 VAL VAL B . n B 1 114 TYR 114 1349 1349 TYR TYR B . n B 1 115 THR 115 1350 1350 THR THR B . n B 1 116 LEU 116 1351 1351 LEU LEU B . n B 1 117 PRO 117 1352 1352 PRO PRO B . n B 1 118 PRO 118 1353 1353 PRO PRO B . n B 1 119 SER 119 1354 1354 SER SER B . n B 1 120 ARG 120 1355 1355 ARG ARG B . n B 1 121 GLU 121 1356 1356 GLU GLU B . n B 1 122 GLU 122 1357 1357 GLU GLU B . n B 1 123 MET 123 1358 1358 MET MET B . n B 1 124 THR 124 1359 1359 THR THR B . n B 1 125 LYS 125 1360 1360 LYS LYS B . n B 1 126 ASN 126 1361 1361 ASN ASN B . n B 1 127 GLN 127 1362 1362 GLN GLN B . n B 1 128 VAL 128 1363 1363 VAL VAL B . n B 1 129 SER 129 1364 1364 SER SER B . n B 1 130 LEU 130 1365 1365 LEU LEU B . n B 1 131 THR 131 1366 1366 THR THR B . n B 1 132 CYS 132 1367 1367 CYS CYS B . n B 1 133 LEU 133 1368 1368 LEU LEU B . n B 1 134 VAL 134 1369 1369 VAL VAL B . n B 1 135 LYS 135 1370 1370 LYS LYS B . n B 1 136 GLY 136 1371 1371 GLY GLY B . n B 1 137 PHE 137 1372 1372 PHE PHE B . n B 1 138 TYR 138 1373 1373 TYR TYR B . n B 1 139 PRO 139 1374 1374 PRO PRO B . n B 1 140 SER 140 1375 1375 SER SER B . n B 1 141 ASP 141 1376 1376 ASP ASP B . n B 1 142 ILE 142 1377 1377 ILE ILE B . n B 1 143 ALA 143 1378 1378 ALA ALA B . n B 1 144 VAL 144 1379 1379 VAL VAL B . n B 1 145 GLU 145 1380 1380 GLU GLU B . n B 1 146 TRP 146 1381 1381 TRP TRP B . n B 1 147 GLU 147 1382 1382 GLU GLU B . n B 1 148 SER 148 1383 1383 SER SER B . n B 1 149 ASN 149 1384 1384 ASN ASN B . n B 1 150 GLY 150 1385 1385 GLY GLY B . n B 1 151 GLN 151 1386 1386 GLN GLN B . n B 1 152 PRO 152 1387 1387 PRO PRO B . n B 1 153 GLU 153 1388 1388 GLU GLU B . n B 1 154 ASN 154 1389 1389 ASN ASN B . n B 1 155 ASN 155 1390 1390 ASN ASN B . n B 1 156 TYR 156 1391 1391 TYR TYR B . n B 1 157 LYS 157 1392 1392 LYS LYS B . n B 1 158 THR 158 1393 1393 THR THR B . n B 1 159 THR 159 1394 1394 THR THR B . n B 1 160 PRO 160 1395 1395 PRO PRO B . n B 1 161 PRO 161 1396 1396 PRO PRO B . n B 1 162 VAL 162 1397 1397 VAL VAL B . n B 1 163 LEU 163 1398 1398 LEU LEU B . n B 1 164 ASP 164 1399 1399 ASP ASP B . n B 1 165 SER 165 1400 1400 SER SER B . n B 1 166 ASP 166 1401 1401 ASP ASP B . n B 1 167 GLY 167 1402 1402 GLY GLY B . n B 1 168 SER 168 1403 1403 SER SER B . n B 1 169 PHE 169 1404 1404 PHE PHE B . n B 1 170 PHE 170 1405 1405 PHE PHE B . n B 1 171 LEU 171 1406 1406 LEU LEU B . n B 1 172 TYR 172 1407 1407 TYR TYR B . n B 1 173 SER 173 1408 1408 SER SER B . n B 1 174 LYS 174 1409 1409 LYS LYS B . n B 1 175 LEU 175 1410 1410 LEU LEU B . n B 1 176 THR 176 1411 1411 THR THR B . n B 1 177 VAL 177 1412 1412 VAL VAL B . n B 1 178 ASP 178 1413 1413 ASP ASP B . n B 1 179 LYS 179 1414 1414 LYS LYS B . n B 1 180 SER 180 1415 1415 SER SER B . n B 1 181 ARG 181 1416 1416 ARG ARG B . n B 1 182 TRP 182 1417 1417 TRP TRP B . n B 1 183 GLN 183 1418 1418 GLN GLN B . n B 1 184 GLN 184 1419 1419 GLN GLN B . n B 1 185 GLY 185 1420 1420 GLY GLY B . n B 1 186 ASN 186 1421 1421 ASN ASN B . n B 1 187 VAL 187 1422 1422 VAL VAL B . n B 1 188 PHE 188 1423 1423 PHE PHE B . n B 1 189 SER 189 1424 1424 SER SER B . n B 1 190 CYS 190 1425 1425 CYS CYS B . n B 1 191 SER 191 1426 1426 SER SER B . n B 1 192 VAL 192 1427 1427 VAL VAL B . n B 1 193 MET 193 1428 1428 MET MET B . n B 1 194 HIS 194 1429 1429 HIS HIS B . n B 1 195 GLU 195 1430 1430 GLU GLU B . n B 1 196 ALA 196 1431 1431 ALA ALA B . n B 1 197 LEU 197 1432 1432 LEU LEU B . n B 1 198 HIS 198 1433 1433 HIS HIS B . n B 1 199 ASN 199 1434 1434 ASN ASN B . n B 1 200 HIS 200 1435 1435 HIS HIS B . n B 1 201 TYR 201 1436 1436 TYR TYR B . n B 1 202 THR 202 1437 1437 THR THR B . n B 1 203 GLN 203 1438 1438 GLN GLN B . n B 1 204 LYS 204 1439 1439 LYS LYS B . n B 1 205 SER 205 1440 1440 SER SER B . n B 1 206 LEU 206 1441 1441 LEU LEU B . n B 1 207 SER 207 1442 1442 SER SER B . n B 1 208 LEU 208 1443 1443 LEU LEU B . n B 1 209 SER 209 1444 1444 SER SER B . n B 1 210 PRO 210 1445 1445 PRO PRO B . n B 1 211 GLY 211 1446 ? ? ? B . n B 1 212 LYS 212 1447 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 1 1 HOH WAT A . C 2 HOH 2 2 2 HOH WAT A . C 2 HOH 3 3 3 HOH WAT A . C 2 HOH 4 4 4 HOH WAT A . C 2 HOH 5 5 5 HOH WAT A . C 2 HOH 6 6 6 HOH WAT A . C 2 HOH 7 7 7 HOH WAT A . C 2 HOH 8 8 8 HOH WAT A . C 2 HOH 9 9 9 HOH WAT A . C 2 HOH 10 10 10 HOH WAT A . C 2 HOH 11 11 11 HOH WAT A . C 2 HOH 12 12 12 HOH WAT A . C 2 HOH 13 21 21 HOH WAT A . C 2 HOH 14 22 22 HOH WAT A . C 2 HOH 15 23 23 HOH WAT A . C 2 HOH 16 24 24 HOH WAT A . C 2 HOH 17 28 28 HOH WAT A . C 2 HOH 18 29 29 HOH WAT A . C 2 HOH 19 31 31 HOH WAT A . C 2 HOH 20 40 40 HOH WAT A . C 2 HOH 21 41 41 HOH WAT A . C 2 HOH 22 42 42 HOH WAT A . C 2 HOH 23 44 44 HOH WAT A . C 2 HOH 24 45 45 HOH WAT A . C 2 HOH 25 46 46 HOH WAT A . C 2 HOH 26 47 47 HOH WAT A . C 2 HOH 27 48 48 HOH WAT A . C 2 HOH 28 61 61 HOH WAT A . C 2 HOH 29 62 62 HOH WAT A . C 2 HOH 30 63 63 HOH WAT A . C 2 HOH 31 64 64 HOH WAT A . C 2 HOH 32 74 74 HOH WAT A . C 2 HOH 33 75 75 HOH WAT A . C 2 HOH 34 76 76 HOH WAT A . C 2 HOH 35 77 77 HOH WAT A . C 2 HOH 36 78 78 HOH WAT A . C 2 HOH 37 79 79 HOH WAT A . C 2 HOH 38 80 80 HOH WAT A . C 2 HOH 39 81 81 HOH WAT A . C 2 HOH 40 82 82 HOH WAT A . C 2 HOH 41 83 83 HOH WAT A . C 2 HOH 42 91 91 HOH WAT A . C 2 HOH 43 92 92 HOH WAT A . C 2 HOH 44 93 93 HOH WAT A . C 2 HOH 45 94 94 HOH WAT A . C 2 HOH 46 95 95 HOH WAT A . C 2 HOH 47 96 96 HOH WAT A . C 2 HOH 48 97 97 HOH WAT A . D 2 HOH 1 13 13 HOH WAT B . D 2 HOH 2 15 15 HOH WAT B . D 2 HOH 3 16 16 HOH WAT B . D 2 HOH 4 17 17 HOH WAT B . D 2 HOH 5 18 18 HOH WAT B . D 2 HOH 6 19 19 HOH WAT B . D 2 HOH 7 20 20 HOH WAT B . D 2 HOH 8 32 32 HOH WAT B . D 2 HOH 9 34 34 HOH WAT B . D 2 HOH 10 35 35 HOH WAT B . D 2 HOH 11 36 36 HOH WAT B . D 2 HOH 12 37 37 HOH WAT B . D 2 HOH 13 38 38 HOH WAT B . D 2 HOH 14 39 39 HOH WAT B . D 2 HOH 15 50 50 HOH WAT B . D 2 HOH 16 52 52 HOH WAT B . D 2 HOH 17 53 53 HOH WAT B . D 2 HOH 18 54 54 HOH WAT B . D 2 HOH 19 55 55 HOH WAT B . D 2 HOH 20 56 56 HOH WAT B . D 2 HOH 21 60 60 HOH WAT B . D 2 HOH 22 65 65 HOH WAT B . D 2 HOH 23 67 67 HOH WAT B . D 2 HOH 24 84 84 HOH WAT B . D 2 HOH 25 85 85 HOH WAT B . D 2 HOH 26 86 86 HOH WAT B . D 2 HOH 27 87 87 HOH WAT B . D 2 HOH 28 88 88 HOH WAT B . D 2 HOH 29 89 89 HOH WAT B . D 2 HOH 30 90 90 HOH WAT B . D 2 HOH 31 98 98 HOH WAT B . D 2 HOH 32 99 99 HOH WAT B . D 2 HOH 33 100 100 HOH WAT B . D 2 HOH 34 101 101 HOH WAT B . D 2 HOH 35 102 102 HOH WAT B . D 2 HOH 36 103 103 HOH WAT B . D 2 HOH 37 104 104 HOH WAT B . D 2 HOH 38 105 105 HOH WAT B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CNS refinement . ? 2 CrystalClear 'data reduction' . ? 3 CrystalClear 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 3DNK _cell.length_a 49.37 _cell.length_b 78.21 _cell.length_c 147.15 _cell.angle_alpha 90. _cell.angle_beta 90. _cell.angle_gamma 90. _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DNK _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 3DNK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pdbx_details '20% PEG 6000, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-03-15 _diffrn_detector.details 'Osmic mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'confocal mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3DNK _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.84 _reflns.d_resolution_low 50. _reflns.number_all 13939 _reflns.number_obs 13869 _reflns.percent_possible_obs 98. _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.84 _reflns_shell.d_res_low 2.94 _reflns_shell.percent_possible_all 82.0 _reflns_shell.Rmerge_I_obs .163 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3DNK _refine.ls_d_res_high 2.84 _refine.ls_d_res_low 20.08 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 13939 _refine.ls_number_reflns_obs 13869 _refine.ls_number_reflns_R_free 1273 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.24 _refine.ls_R_factor_R_work 0.24 _refine.ls_R_factor_R_free 0.32 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3347 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 3433 _refine_hist.d_res_high 2.84 _refine_hist.d_res_low 20.08 # _database_PDB_matrix.entry_id 3DNK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3DNK _struct.title 'Enzyme deglycosylated Human IgG1 Fc fragment' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DNK _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'Immunoglobulin fold, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6PI81_HUMAN _struct_ref.pdbx_db_accession Q6PI81 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; _struct_ref.pdbx_align_begin 267 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DNK A 1 ? 212 ? Q6PI81 267 ? 478 ? 236 447 2 1 3DNK B 1 ? 212 ? Q6PI81 267 ? 478 ? 1236 1447 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DNK ASP A 62 ? UNP Q6PI81 ASN 328 'engineered mutation' 297 1 2 3DNK ASP B 62 ? UNP Q6PI81 ASN 328 'engineered mutation' 1297 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2260 ? 1 MORE -12 ? 1 'SSA (A^2)' 21560 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 11 ? MET A 17 ? LYS A 246 MET A 252 1 ? 7 HELX_P HELX_P2 2 LEU A 74 ? LEU A 79 ? LEU A 309 LEU A 314 1 ? 6 HELX_P HELX_P3 3 SER A 119 ? LYS A 125 ? SER A 354 LYS A 360 5 ? 7 HELX_P HELX_P4 4 LYS A 179 ? GLY A 185 ? LYS A 414 GLY A 420 1 ? 7 HELX_P HELX_P5 5 LEU A 197 ? TYR A 201 ? LEU A 432 TYR A 436 5 ? 5 HELX_P HELX_P6 6 LYS B 11 ? MET B 17 ? LYS B 1246 MET B 1252 1 ? 7 HELX_P HELX_P7 7 LEU B 74 ? ASN B 80 ? LEU B 1309 ASN B 1315 1 ? 7 HELX_P HELX_P8 8 SER B 119 ? MET B 123 ? SER B 1354 MET B 1358 5 ? 5 HELX_P HELX_P9 9 LYS B 179 ? GLN B 184 ? LYS B 1414 GLN B 1419 1 ? 6 HELX_P HELX_P10 10 LEU B 197 ? ASN B 199 ? LEU B 1432 ASN B 1434 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 86 SG ? ? A CYS 261 A CYS 321 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 132 SG ? ? ? 1_555 A CYS 190 SG ? ? A CYS 367 A CYS 425 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 86 SG ? ? B CYS 1261 B CYS 1321 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf4 disulf ? ? B CYS 132 SG ? ? ? 1_555 B CYS 190 SG ? ? B CYS 1367 B CYS 1425 1_555 ? ? ? ? ? ? ? 2.038 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 26 ? CYS A 86 ? CYS A 261 ? 1_555 CYS A 321 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 132 ? CYS A 190 ? CYS A 367 ? 1_555 CYS A 425 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 26 ? CYS B 86 ? CYS B 1261 ? 1_555 CYS B 1321 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 132 ? CYS B 190 ? CYS B 1367 ? 1_555 CYS B 1425 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 138 A . ? TYR 373 A PRO 139 A ? PRO 374 A 1 -0.10 2 TYR 138 B . ? TYR 1373 B PRO 139 B ? PRO 1374 B 1 -0.31 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 3 ? F ? 4 ? G ? 4 ? H ? 4 ? I ? 4 ? J ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 4 ? PHE A 8 ? SER A 239 PHE A 243 A 2 GLU A 23 ? VAL A 31 ? GLU A 258 VAL A 266 A 3 TYR A 65 ? THR A 72 ? TYR A 300 THR A 307 A 4 LYS A 53 ? LYS A 55 ? LYS A 288 LYS A 290 B 1 VAL A 47 ? VAL A 49 ? VAL A 282 VAL A 284 B 2 LYS A 39 ? VAL A 44 ? LYS A 274 VAL A 279 B 3 TYR A 84 ? SER A 89 ? TYR A 319 SER A 324 B 4 ILE A 97 ? ILE A 101 ? ILE A 332 ILE A 336 C 1 GLN A 112 ? LEU A 116 ? GLN A 347 LEU A 351 C 2 GLN A 127 ? PHE A 137 ? GLN A 362 PHE A 372 C 3 PHE A 169 ? ASP A 178 ? PHE A 404 ASP A 413 C 4 TYR A 156 ? THR A 158 ? TYR A 391 THR A 393 D 1 GLN A 112 ? LEU A 116 ? GLN A 347 LEU A 351 D 2 GLN A 127 ? PHE A 137 ? GLN A 362 PHE A 372 D 3 PHE A 169 ? ASP A 178 ? PHE A 404 ASP A 413 D 4 VAL A 162 ? LEU A 163 ? VAL A 397 LEU A 398 E 1 ALA A 143 ? SER A 148 ? ALA A 378 SER A 383 E 2 VAL A 187 ? MET A 193 ? VAL A 422 MET A 428 E 3 THR A 202 ? SER A 207 ? THR A 437 SER A 442 F 1 SER B 4 ? PHE B 8 ? SER B 1239 PHE B 1243 F 2 GLU B 23 ? VAL B 31 ? GLU B 1258 VAL B 1266 F 3 TYR B 65 ? THR B 72 ? TYR B 1300 THR B 1307 F 4 THR B 54 ? GLU B 59 ? THR B 1289 GLU B 1294 G 1 VAL B 47 ? VAL B 49 ? VAL B 1282 VAL B 1284 G 2 VAL B 38 ? VAL B 44 ? VAL B 1273 VAL B 1279 G 3 TYR B 84 ? ASN B 90 ? TYR B 1319 ASN B 1325 G 4 ILE B 97 ? ILE B 101 ? ILE B 1332 ILE B 1336 H 1 GLN B 112 ? LEU B 116 ? GLN B 1347 LEU B 1351 H 2 GLN B 127 ? PHE B 137 ? GLN B 1362 PHE B 1372 H 3 PHE B 169 ? ASP B 178 ? PHE B 1404 ASP B 1413 H 4 TYR B 156 ? THR B 158 ? TYR B 1391 THR B 1393 I 1 GLN B 112 ? LEU B 116 ? GLN B 1347 LEU B 1351 I 2 GLN B 127 ? PHE B 137 ? GLN B 1362 PHE B 1372 I 3 PHE B 169 ? ASP B 178 ? PHE B 1404 ASP B 1413 I 4 VAL B 162 ? LEU B 163 ? VAL B 1397 LEU B 1398 J 1 ALA B 143 ? GLU B 147 ? ALA B 1378 GLU B 1382 J 2 PHE B 188 ? MET B 193 ? PHE B 1423 MET B 1428 J 3 TYR B 201 ? LEU B 206 ? TYR B 1436 LEU B 1441 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 6 ? N PHE A 241 O VAL A 27 ? O VAL A 262 A 2 3 N VAL A 28 ? N VAL A 263 O VAL A 67 ? O VAL A 302 A 3 4 O VAL A 70 ? O VAL A 305 N LYS A 53 ? N LYS A 288 B 1 2 O VAL A 47 ? O VAL A 282 N VAL A 44 ? N VAL A 279 B 2 3 N ASN A 41 ? N ASN A 276 O LYS A 87 ? O LYS A 322 B 3 4 N VAL A 88 ? N VAL A 323 O ILE A 97 ? O ILE A 332 C 1 2 N LEU A 116 ? N LEU A 351 O THR A 131 ? O THR A 366 C 2 3 N LEU A 130 ? N LEU A 365 O LEU A 175 ? O LEU A 410 C 3 4 O LYS A 174 ? O LYS A 409 N LYS A 157 ? N LYS A 392 D 1 2 N LEU A 116 ? N LEU A 351 O THR A 131 ? O THR A 366 D 2 3 N LEU A 130 ? N LEU A 365 O LEU A 175 ? O LEU A 410 D 3 4 O PHE A 170 ? O PHE A 405 N VAL A 162 ? N VAL A 397 E 1 2 N GLU A 145 ? N GLU A 380 O SER A 191 ? O SER A 426 E 2 3 N PHE A 188 ? N PHE A 423 O LEU A 206 ? O LEU A 441 F 1 2 N PHE B 8 ? N PHE B 1243 O THR B 25 ? O THR B 1260 F 2 3 N VAL B 24 ? N VAL B 1259 O LEU B 71 ? O LEU B 1306 F 3 4 O VAL B 68 ? O VAL B 1303 N LYS B 55 ? N LYS B 1290 G 1 2 O VAL B 49 ? O VAL B 1284 N TRP B 42 ? N TRP B 1277 G 2 3 N TYR B 43 ? N TYR B 1278 O LYS B 85 ? O LYS B 1320 G 3 4 N TYR B 84 ? N TYR B 1319 O ILE B 101 ? O ILE B 1336 H 1 2 N GLN B 112 ? N GLN B 1347 O LYS B 135 ? O LYS B 1370 H 2 3 N PHE B 137 ? N PHE B 1372 O PHE B 169 ? O PHE B 1404 H 3 4 O LYS B 174 ? O LYS B 1409 N LYS B 157 ? N LYS B 1392 I 1 2 N GLN B 112 ? N GLN B 1347 O LYS B 135 ? O LYS B 1370 I 2 3 N PHE B 137 ? N PHE B 1372 O PHE B 169 ? O PHE B 1404 I 3 4 O PHE B 170 ? O PHE B 1405 N VAL B 162 ? N VAL B 1397 J 1 2 N GLU B 145 ? N GLU B 1380 O SER B 191 ? O SER B 1426 J 2 3 N PHE B 188 ? N PHE B 1423 O LEU B 206 ? O LEU B 1441 # _pdbx_entry_details.entry_id 3DNK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 265 ? ? 77.14 44.75 2 1 SER A 267 ? ? -28.28 125.48 3 1 ASP A 270 ? ? -111.62 79.75 4 1 ASN A 286 ? ? -60.50 17.79 5 1 PRO A 291 ? ? -28.53 145.47 6 1 GLU A 294 ? ? -40.45 106.98 7 1 TYR A 296 ? ? 17.38 61.73 8 1 ASP A 297 ? ? 168.23 21.73 9 1 SER A 298 ? ? 62.81 -8.34 10 1 GLN A 311 ? ? -59.69 -9.89 11 1 LYS A 326 ? ? -48.41 2.84 12 1 PRO A 329 ? ? -52.38 -71.79 13 1 ASN A 389 ? ? -65.49 -74.49 14 1 ASN A 390 ? ? -59.03 87.71 15 1 ASN A 421 ? ? -45.54 154.61 16 1 TYR A 436 ? ? -171.71 117.40 17 1 LEU A 443 ? ? -63.21 55.05 18 1 ASP B 1265 ? ? 77.55 40.40 19 1 GLU B 1269 ? ? -54.28 -71.96 20 1 ALA B 1287 ? ? -56.59 -175.27 21 1 LYS B 1288 ? ? -172.25 129.13 22 1 PRO B 1291 ? ? -53.93 106.81 23 1 ARG B 1292 ? ? -45.52 166.64 24 1 ASP B 1297 ? ? -168.21 56.32 25 1 SER B 1298 ? ? 71.17 -55.18 26 1 ALA B 1327 ? ? -92.78 57.22 27 1 PRO B 1329 ? ? -33.13 -90.11 28 1 SER B 1337 ? ? -178.84 136.82 29 1 LYS B 1338 ? ? -43.35 151.78 30 1 GLU B 1356 ? ? -59.15 -9.72 31 1 ASN B 1384 ? ? 41.57 81.22 32 1 ASN B 1390 ? ? -151.04 60.68 33 1 LYS B 1414 ? ? -37.88 -37.35 34 1 GLN B 1419 ? ? -52.42 1.94 35 1 ASN B 1421 ? ? 51.65 118.52 36 1 LEU B 1441 ? ? -171.06 118.49 37 1 SER B 1444 ? ? -78.84 -79.54 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 445 ? A PRO 210 2 1 Y 1 A GLY 446 ? A GLY 211 3 1 Y 1 A LYS 447 ? A LYS 212 4 1 Y 1 B GLY 1446 ? B GLY 211 5 1 Y 1 B LYS 1447 ? B LYS 212 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3DNK _atom_sites.fract_transf_matrix[1][1] 0.020255 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012786 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006796 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_