HEADER SIGNALING PROTEIN/HYDROLASE 04-JUL-08 3DOF TITLE COMPLEX OF ARL2 AND BART, CRYSTAL FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: ARF-LIKE 2-BINDING PROTEIN, BINDER OF ARF2 PROTEIN 1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: DE3; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PGEX-4T-1 KEYWDS ADP-RIBOSYLATION FACTOR-LIKE 2, BINDER OF ARL2, SMALL GTPASE, KEYWDS 2 EFFECTOR, COMPLEX STRUCTURE, GTP-BINDING, LIPOPROTEIN, MYRISTATE, KEYWDS 3 NUCLEOTIDE-BINDING, POLYMORPHISM, ALTERNATIVE SPLICING, CYTOPLASM, KEYWDS 4 MITOCHONDRION, PHOSPHOPROTEIN, SIGNALING PROTEIN-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.ZHANG,S.LI,J.DING REVDAT 3 01-NOV-23 3DOF 1 REMARK SEQADV REVDAT 2 09-JUN-09 3DOF 1 JRNL REVDAT 1 03-MAR-09 3DOF 0 JRNL AUTH T.ZHANG,S.LI,Y.ZHANG,C.ZHONG,Z.LAI,J.DING JRNL TITL CRYSTAL STRUCTURE OF THE ARL2-GTP-BART COMPLEX REVEALS A JRNL TITL 2 NOVEL RECOGNITION AND BINDING MODE OF SMALL GTPASE WITH JRNL TITL 3 EFFECTOR JRNL REF STRUCTURE V. 17 602 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 19368893 JRNL DOI 10.1016/J.STR.2009.01.014 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 5520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 297 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 399 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.4840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2526 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 87.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.66000 REMARK 3 B22 (A**2) : 6.28000 REMARK 3 B33 (A**2) : -1.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.676 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.539 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 77.253 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.904 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.874 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2609 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3529 ; 1.074 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 307 ; 6.036 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;40.892 ;24.741 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 472 ;19.162 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;13.718 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 387 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1961 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1243 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1763 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 99 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.135 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.256 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.690 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1591 ; 1.130 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2467 ; 1.972 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1175 ; 1.464 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1062 ; 1.896 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2766 ; 1.638 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 16 ; 0.534 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2558 ; 0.471 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DOF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048289. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5818 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.16100 REMARK 200 R SYM (I) : 0.16100 REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.75900 REMARK 200 R SYM FOR SHELL (I) : 0.75900 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1KSG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2, 20% PEG 3350, PH 5.9, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.33150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.93950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.58250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.93950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.33150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.58250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ALA B 3 REMARK 465 LEU B 4 REMARK 465 GLU B 5 REMARK 465 GLY B 6 REMARK 465 GLU B 7 REMARK 465 SER B 8 REMARK 465 PHE B 9 REMARK 465 ALA B 10 REMARK 465 LEU B 11 REMARK 465 SER B 12 REMARK 465 PHE B 13 REMARK 465 GLY B 134 REMARK 465 ARG B 135 REMARK 465 GLY B 136 REMARK 465 LEU B 137 REMARK 465 ASP B 138 REMARK 465 LEU B 139 REMARK 465 SER B 140 REMARK 465 SER B 141 REMARK 465 GLY B 142 REMARK 465 LEU B 143 REMARK 465 VAL B 144 REMARK 465 VAL B 145 REMARK 465 THR B 146 REMARK 465 SER B 147 REMARK 465 LEU B 148 REMARK 465 CYS B 149 REMARK 465 LYS B 150 REMARK 465 SER B 151 REMARK 465 SER B 152 REMARK 465 SER B 153 REMARK 465 LEU B 154 REMARK 465 PRO B 155 REMARK 465 ALA B 156 REMARK 465 SER B 157 REMARK 465 GLN B 158 REMARK 465 ASN B 159 REMARK 465 ASN B 160 REMARK 465 LEU B 161 REMARK 465 ARG B 162 REMARK 465 HIS B 163 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 14 CB SER B 14 OG 0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA B 16 N - CA - C ANGL. DEV. = 18.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 26 -18.81 75.07 REMARK 500 LYS A 35 30.23 -75.55 REMARK 500 ASP A 42 30.08 -72.53 REMARK 500 THR A 43 -7.55 -156.70 REMARK 500 VAL A 111 60.83 -113.66 REMARK 500 GLU A 113 -14.97 66.05 REMARK 500 LEU A 142 -12.74 64.98 REMARK 500 HIS A 187 -71.08 -64.63 REMARK 500 ALA B 19 -70.89 -59.26 REMARK 500 GLU B 20 -60.34 -24.51 REMARK 500 GLU B 29 -64.42 -121.33 REMARK 500 GLU B 51 45.18 -89.46 REMARK 500 ARG B 84 -43.86 -139.49 REMARK 500 GLN B 98 8.85 -65.72 REMARK 500 HIS B 99 -65.54 -161.14 REMARK 500 HIS B 100 41.83 -63.40 REMARK 500 LYS B 101 80.07 -175.54 REMARK 500 GLU B 103 39.10 -71.24 REMARK 500 VAL B 104 -138.55 -91.52 REMARK 500 ALA B 105 -15.21 65.09 REMARK 500 ASP B 107 66.84 -66.13 REMARK 500 ILE B 108 -51.51 -148.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 193 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DOE RELATED DB: PDB DBREF 3DOF A 1 184 UNP P36404 ARL2_HUMAN 1 184 DBREF 3DOF B 1 163 UNP Q9Y2Y0 AR2BP_HUMAN 1 163 SEQADV 3DOF LEU A 185 UNP P36404 EXPRESSION TAG SEQADV 3DOF GLU A 186 UNP P36404 EXPRESSION TAG SEQADV 3DOF HIS A 187 UNP P36404 EXPRESSION TAG SEQADV 3DOF HIS A 188 UNP P36404 EXPRESSION TAG SEQADV 3DOF HIS A 189 UNP P36404 EXPRESSION TAG SEQADV 3DOF HIS A 190 UNP P36404 EXPRESSION TAG SEQADV 3DOF HIS A 191 UNP P36404 EXPRESSION TAG SEQADV 3DOF HIS A 192 UNP P36404 EXPRESSION TAG SEQADV 3DOF GLY B -1 UNP Q9Y2Y0 EXPRESSION TAG SEQADV 3DOF SER B 0 UNP Q9Y2Y0 EXPRESSION TAG SEQRES 1 A 192 MET GLY LEU LEU THR ILE LEU LYS LYS MET LYS GLN LYS SEQRES 2 A 192 GLU ARG GLU LEU ARG LEU LEU MET LEU GLY LEU ASP ASN SEQRES 3 A 192 ALA GLY LYS THR THR ILE LEU LYS LYS PHE ASN GLY GLU SEQRES 4 A 192 ASP ILE ASP THR ILE SER PRO THR LEU GLY PHE ASN ILE SEQRES 5 A 192 LYS THR LEU GLU HIS ARG GLY PHE LYS LEU ASN ILE TRP SEQRES 6 A 192 ASP VAL GLY GLY GLN LYS SER LEU ARG SER TYR TRP ARG SEQRES 7 A 192 ASN TYR PHE GLU SER THR ASP GLY LEU ILE TRP VAL VAL SEQRES 8 A 192 ASP SER ALA ASP ARG GLN ARG MET GLN ASP CYS GLN ARG SEQRES 9 A 192 GLU LEU GLN SER LEU LEU VAL GLU GLU ARG LEU ALA GLY SEQRES 10 A 192 ALA THR LEU LEU ILE PHE ALA ASN LYS GLN ASP LEU PRO SEQRES 11 A 192 GLY ALA LEU SER SER ASN ALA ILE ARG GLU VAL LEU GLU SEQRES 12 A 192 LEU ASP SER ILE ARG SER HIS HIS TRP CYS ILE GLN GLY SEQRES 13 A 192 CYS SER ALA VAL THR GLY GLU ASN LEU LEU PRO GLY ILE SEQRES 14 A 192 ASP TRP LEU LEU ASP ASP ILE SER SER ARG ILE PHE THR SEQRES 15 A 192 ALA ASP LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 165 GLY SER MET ASP ALA LEU GLU GLY GLU SER PHE ALA LEU SEQRES 2 B 165 SER PHE SER SER ALA SER ASP ALA GLU PHE ASP ALA VAL SEQRES 3 B 165 VAL GLY TYR LEU GLU ASP ILE ILE MET ASP ASP GLU PHE SEQRES 4 B 165 GLN LEU LEU GLN ARG ASN PHE MET ASP LYS TYR TYR LEU SEQRES 5 B 165 GLU PHE GLU ASP THR GLU GLU ASN LYS LEU ILE TYR THR SEQRES 6 B 165 PRO ILE PHE ASN GLU TYR ILE SER LEU VAL GLU LYS TYR SEQRES 7 B 165 ILE GLU GLU GLN LEU LEU GLN ARG ILE PRO GLU PHE ASN SEQRES 8 B 165 MET ALA ALA PHE THR THR THR LEU GLN HIS HIS LYS ASP SEQRES 9 B 165 GLU VAL ALA GLY ASP ILE PHE ASP MET LEU LEU THR PHE SEQRES 10 B 165 THR ASP PHE LEU ALA PHE LYS GLU MET PHE LEU ASP TYR SEQRES 11 B 165 ARG ALA GLU LYS GLU GLY ARG GLY LEU ASP LEU SER SER SEQRES 12 B 165 GLY LEU VAL VAL THR SER LEU CYS LYS SER SER SER LEU SEQRES 13 B 165 PRO ALA SER GLN ASN ASN LEU ARG HIS HET GTP A 201 32 HET MG A 193 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 GTP C10 H16 N5 O14 P3 FORMUL 4 MG MG 2+ FORMUL 5 HOH *15(H2 O) HELIX 1 1 GLY A 2 LYS A 11 1 10 HELIX 2 2 GLY A 28 GLY A 38 1 11 HELIX 3 3 LEU A 73 TYR A 80 5 8 HELIX 4 4 ARG A 98 LEU A 110 1 13 HELIX 5 5 SER A 134 VAL A 141 1 8 HELIX 6 6 LEU A 142 LEU A 144 5 3 HELIX 7 7 ASN A 164 HIS A 189 1 26 HELIX 8 8 SER B 17 GLY B 26 1 10 HELIX 9 9 GLY B 26 ILE B 31 1 6 HELIX 10 10 ASP B 34 ASP B 46 1 13 HELIX 11 11 ILE B 61 LEU B 82 1 22 HELIX 12 12 ASN B 89 GLN B 98 1 10 HELIX 13 13 ILE B 108 LEU B 113 1 6 HELIX 14 14 THR B 114 THR B 116 5 3 HELIX 15 15 ASP B 117 LYS B 132 1 16 SHEET 1 A 6 PHE A 50 HIS A 57 0 SHEET 2 A 6 PHE A 60 VAL A 67 -1 O LEU A 62 N LEU A 55 SHEET 3 A 6 GLU A 16 LEU A 22 1 N LEU A 19 O TRP A 65 SHEET 4 A 6 GLY A 86 ASP A 92 1 O ILE A 88 N LEU A 20 SHEET 5 A 6 THR A 119 ASN A 125 1 O PHE A 123 N VAL A 91 SHEET 6 A 6 TRP A 152 GLY A 156 1 O CYS A 153 N ILE A 122 CISPEP 1 SER B 14 SER B 15 0 19.54 SITE 1 AC1 19 LEU A 24 ASP A 25 ASN A 26 ALA A 27 SITE 2 AC1 19 GLY A 28 LYS A 29 THR A 30 THR A 31 SITE 3 AC1 19 ILE A 44 THR A 47 GLY A 69 ASN A 125 SITE 4 AC1 19 LYS A 126 ASP A 128 LEU A 129 SER A 158 SITE 5 AC1 19 ALA A 159 VAL A 160 MG A 193 SITE 1 AC2 3 THR A 30 THR A 47 GTP A 201 CRYST1 44.663 45.165 175.879 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022390 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005686 0.00000