data_3DQD
#
_entry.id 3DQD
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3DQD pdb_00003dqd 10.2210/pdb3dqd/pdb
RCSB RCSB048357 ? ?
WWPDB D_1000048357 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2008-09-23
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2021-10-20
4 'Structure model' 1 3 2023-08-30
5 'Structure model' 1 4 2023-11-15
6 'Structure model' 1 5 2024-11-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Database references'
3 3 'Structure model' 'Derived calculations'
4 4 'Structure model' 'Data collection'
5 4 'Structure model' 'Refinement description'
6 5 'Structure model' 'Data collection'
7 6 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' database_2
2 3 'Structure model' struct_conn
3 3 'Structure model' struct_ref_seq_dif
4 4 'Structure model' chem_comp_atom
5 4 'Structure model' chem_comp_bond
6 4 'Structure model' pdbx_initial_refinement_model
7 5 'Structure model' chem_comp_atom
8 5 'Structure model' chem_comp_bond
9 6 'Structure model' pdbx_entry_details
10 6 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
4 3 'Structure model' '_struct_ref_seq_dif.details'
5 5 'Structure model' '_chem_comp_atom.atom_id'
6 5 'Structure model' '_chem_comp_bond.atom_id_2'
7 6 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_status.entry_id 3DQD
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2008-07-09
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.content_type
_pdbx_database_related.details
PDB 1HUY unspecified 'CRYSTAL STRUCTURE OF CITRINE, AN IMPROVED YELLOW VARIANT OF GREEN FLUORESCENT PROTEIN'
PDB 1YFP unspecified 'CRYSTAL STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP, P21212 SPACE GROUP'
PDB 2YFP unspecified 'CRYSTAL STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP, P212121 SPACE GROUP'
PDB 1F0B unspecified 'CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q'
PDB 1F09 unspecified 'CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES'
PDB 3DPW unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 1: Structure 1 in a Series of 26 High Pressure Structures
;
PDB 3DPX unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 5000 Atmospheres: Structure 26 in a Series of 26 High Pressure Structures
;
PDB 3DPZ unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 3: Structure 25 in a Series of 26 High Pressure Structures
;
PDB 3DQ1 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 2: Structure 24 in a Series of 26 High Pressure Structures
;
PDB 3DQ2 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures
;
PDB 3DQ3 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 2500 Atmospheres: Structure 22 in a Series of 26 High Pressure Structures
;
PDB 3DQ4 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 2000 Atmospheres Number 2: Structure 20 in a Series of 26 High Pressure Structures
;
PDB 3DQ5 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1960 Atmospheres: Structure 19 in a Series of 26 High Pressure Structures
;
PDB 3DQ6 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 2: Structure 18 in a Series of 26 High Pressure Structures
;
PDB 3DQ7 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 1: Structure 17 in a Series of 26 High Pressure Structures
;
PDB 3DQ8 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 2: Structure 16 in a Series of 26 High Pressure Structures
;
PDB 3DQ9 unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 1: Structure 15 in a Series of 26 High Pressure Structures
;
PDB 3DQA unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 4: Structure 14 in a Series of 26 High Pressure Structures
;
PDB 3DQC unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 3: Structure 13 in a Series of 26 High Pressure Structures
;
PDB 3DQE unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 1: Structure 11 in a Series of 26 High Pressure Structures
;
PDB 3DQF unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 6: Structure 10 in a Series of 26 High Pressure Structures
;
PDB 3DQH unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 5: Structure 9 in a Series of 26 High Pressure Structures
;
PDB 3DQI unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 4: Structure 8 in a Series of 26 High Pressure Structures
;
PDB 3DQJ unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 3: Structure 7 in a Series of 26 High Pressure Structures
;
PDB 3DQK unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 2: Structure 6 in a Series of 26 High Pressure Structures
;
PDB 3DQL unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 1: Structure 5 in a Series of 26 High Pressure Structures
;
PDB 3DQM unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 750 Atmospheres: Structure 4 in a Series of 26 High Pressure Structures
;
PDB 3DQN unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 500 Atmospheres: Structure 3 in a Series of 26 High Pressure Structures
;
PDB 3DQO unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 2: Structure 2 in a Series of 26 High Pressure Structures
;
PDB 3DQU unspecified
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 2000 Atmospheres Number 1: Structure 20 in a Series of 26 High Pressure Structures
;
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Barstow, B.' 1
'Kim, C.U.' 2
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.' Proc.Natl.Acad.Sci.Usa
105 13362 13366 2008 PNASA6 US 0027-8424 0040 ? 18768811 10.1073/pnas.0802252105
1 'High-pressure cooling of protein crystals without cryoprotectants.'
'Acta Crystallogr.,Sect.D' 61 881 890 2005 ABCRE6 DK 0907-4449 0766 ? 15983410 10.1107/S090744490500836X
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Barstow, B.' 1 ?
primary 'Ando, N.' 2 ?
primary 'Kim, C.U.' 3 ?
primary 'Gruner, S.M.' 4 ?
1 'Kim, C.U.' 5 ?
1 'Kapfer, R.' 6 ?
1 'Gruner, S.M.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Green fluorescent protein' 27393.916 1 ? 'S65G, V68L, Q69M, S72A, T203Y' ? ?
2 water nat water 18.015 260 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;GDDPMVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTF(CR2)LMCFAR
YPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIM
ADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGM
DELYK
;
_entity_poly.pdbx_seq_one_letter_code_can
;GDDPMVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFGYGLMCFARYP
DHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMAD
KQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGMDE
LYK
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 ASP n
1 3 ASP n
1 4 PRO n
1 5 MET n
1 6 VAL n
1 7 SER n
1 8 LYS n
1 9 GLY n
1 10 GLU n
1 11 GLU n
1 12 LEU n
1 13 PHE n
1 14 THR n
1 15 GLY n
1 16 VAL n
1 17 VAL n
1 18 PRO n
1 19 ILE n
1 20 LEU n
1 21 VAL n
1 22 GLU n
1 23 LEU n
1 24 ASP n
1 25 GLY n
1 26 ASP n
1 27 VAL n
1 28 ASN n
1 29 GLY n
1 30 HIS n
1 31 LYS n
1 32 PHE n
1 33 SER n
1 34 VAL n
1 35 SER n
1 36 GLY n
1 37 GLU n
1 38 GLY n
1 39 GLU n
1 40 GLY n
1 41 ASP n
1 42 ALA n
1 43 THR n
1 44 TYR n
1 45 GLY n
1 46 LYS n
1 47 LEU n
1 48 THR n
1 49 LEU n
1 50 LYS n
1 51 PHE n
1 52 ILE n
1 53 CYS n
1 54 THR n
1 55 THR n
1 56 GLY n
1 57 LYS n
1 58 LEU n
1 59 PRO n
1 60 VAL n
1 61 PRO n
1 62 TRP n
1 63 PRO n
1 64 THR n
1 65 LEU n
1 66 VAL n
1 67 THR n
1 68 THR n
1 69 PHE n
1 70 CR2 n
1 71 LEU n
1 72 MET n
1 73 CYS n
1 74 PHE n
1 75 ALA n
1 76 ARG n
1 77 TYR n
1 78 PRO n
1 79 ASP n
1 80 HIS n
1 81 MET n
1 82 LYS n
1 83 GLN n
1 84 HIS n
1 85 ASP n
1 86 PHE n
1 87 PHE n
1 88 LYS n
1 89 SER n
1 90 ALA n
1 91 MET n
1 92 PRO n
1 93 GLU n
1 94 GLY n
1 95 TYR n
1 96 VAL n
1 97 GLN n
1 98 GLU n
1 99 ARG n
1 100 THR n
1 101 ILE n
1 102 PHE n
1 103 PHE n
1 104 LYS n
1 105 ASP n
1 106 ASP n
1 107 GLY n
1 108 ASN n
1 109 TYR n
1 110 LYS n
1 111 THR n
1 112 ARG n
1 113 ALA n
1 114 GLU n
1 115 VAL n
1 116 LYS n
1 117 PHE n
1 118 GLU n
1 119 GLY n
1 120 ASP n
1 121 THR n
1 122 LEU n
1 123 VAL n
1 124 ASN n
1 125 ARG n
1 126 ILE n
1 127 GLU n
1 128 LEU n
1 129 LYS n
1 130 GLY n
1 131 ILE n
1 132 ASP n
1 133 PHE n
1 134 LYS n
1 135 GLU n
1 136 ASP n
1 137 GLY n
1 138 ASN n
1 139 ILE n
1 140 LEU n
1 141 GLY n
1 142 HIS n
1 143 LYS n
1 144 LEU n
1 145 GLU n
1 146 TYR n
1 147 ASN n
1 148 TYR n
1 149 ASN n
1 150 SER n
1 151 HIS n
1 152 ASN n
1 153 VAL n
1 154 TYR n
1 155 ILE n
1 156 MET n
1 157 ALA n
1 158 ASP n
1 159 LYS n
1 160 GLN n
1 161 LYS n
1 162 ASN n
1 163 GLY n
1 164 ILE n
1 165 LYS n
1 166 VAL n
1 167 ASN n
1 168 PHE n
1 169 LYS n
1 170 ILE n
1 171 ARG n
1 172 HIS n
1 173 ASN n
1 174 ILE n
1 175 GLU n
1 176 ASP n
1 177 GLY n
1 178 SER n
1 179 VAL n
1 180 GLN n
1 181 LEU n
1 182 ALA n
1 183 ASP n
1 184 HIS n
1 185 TYR n
1 186 GLN n
1 187 GLN n
1 188 ASN n
1 189 THR n
1 190 PRO n
1 191 ILE n
1 192 GLY n
1 193 ASP n
1 194 GLY n
1 195 PRO n
1 196 VAL n
1 197 LEU n
1 198 LEU n
1 199 PRO n
1 200 ASP n
1 201 ASN n
1 202 HIS n
1 203 TYR n
1 204 LEU n
1 205 SER n
1 206 TYR n
1 207 GLN n
1 208 SER n
1 209 ALA n
1 210 LEU n
1 211 SER n
1 212 LYS n
1 213 ASP n
1 214 PRO n
1 215 ASN n
1 216 GLU n
1 217 LYS n
1 218 ARG n
1 219 ASP n
1 220 HIS n
1 221 MET n
1 222 VAL n
1 223 LEU n
1 224 LEU n
1 225 GLU n
1 226 PHE n
1 227 VAL n
1 228 THR n
1 229 ALA n
1 230 ALA n
1 231 GLY n
1 232 ILE n
1 233 THR n
1 234 LEU n
1 235 GLY n
1 236 MET n
1 237 ASP n
1 238 GLU n
1 239 LEU n
1 240 TYR n
1 241 LYS n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name Jellyfish
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene GFP
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Aequorea victoria'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6100
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ?
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21(DE3)'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type Plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pET28
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE
? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE
? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE
? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID'
? 'C4 H7 N O4' 133.103
CR2 'L-peptide linking' n '{(4Z)-2-(aminomethyl)-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid'
'CHROMOPHORE (GLY-TYR-GLY)' 'C13 H13 N3 O4' 275.260
CYS 'L-peptide linking' y CYSTEINE
? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE
? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID'
? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE
? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE
? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER
? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE
? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE
? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE
? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE
? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE
? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE
? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE
? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE
? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN
? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE
? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE
? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 -4 ? ? ? A . n
A 1 2 ASP 2 -3 ? ? ? A . n
A 1 3 ASP 3 -2 -2 ASP ASP A . n
A 1 4 PRO 4 -1 -1 PRO PRO A . n
A 1 5 MET 5 0 0 MET MET A . n
A 1 6 VAL 6 1 1 VAL VAL A . n
A 1 7 SER 7 2 2 SER SER A . n
A 1 8 LYS 8 3 3 LYS LYS A . n
A 1 9 GLY 9 4 4 GLY GLY A . n
A 1 10 GLU 10 5 5 GLU GLU A . n
A 1 11 GLU 11 6 6 GLU GLU A . n
A 1 12 LEU 12 7 7 LEU LEU A . n
A 1 13 PHE 13 8 8 PHE PHE A . n
A 1 14 THR 14 9 9 THR THR A . n
A 1 15 GLY 15 10 10 GLY GLY A . n
A 1 16 VAL 16 11 11 VAL VAL A . n
A 1 17 VAL 17 12 12 VAL VAL A . n
A 1 18 PRO 18 13 13 PRO PRO A . n
A 1 19 ILE 19 14 14 ILE ILE A . n
A 1 20 LEU 20 15 15 LEU LEU A . n
A 1 21 VAL 21 16 16 VAL VAL A . n
A 1 22 GLU 22 17 17 GLU GLU A . n
A 1 23 LEU 23 18 18 LEU LEU A . n
A 1 24 ASP 24 19 19 ASP ASP A . n
A 1 25 GLY 25 20 20 GLY GLY A . n
A 1 26 ASP 26 21 21 ASP ASP A . n
A 1 27 VAL 27 22 22 VAL VAL A . n
A 1 28 ASN 28 23 23 ASN ASN A . n
A 1 29 GLY 29 24 24 GLY GLY A . n
A 1 30 HIS 30 25 25 HIS HIS A . n
A 1 31 LYS 31 26 26 LYS LYS A . n
A 1 32 PHE 32 27 27 PHE PHE A . n
A 1 33 SER 33 28 28 SER SER A . n
A 1 34 VAL 34 29 29 VAL VAL A . n
A 1 35 SER 35 30 30 SER SER A . n
A 1 36 GLY 36 31 31 GLY GLY A . n
A 1 37 GLU 37 32 32 GLU GLU A . n
A 1 38 GLY 38 33 33 GLY GLY A . n
A 1 39 GLU 39 34 34 GLU GLU A . n
A 1 40 GLY 40 35 35 GLY GLY A . n
A 1 41 ASP 41 36 36 ASP ASP A . n
A 1 42 ALA 42 37 37 ALA ALA A . n
A 1 43 THR 43 38 38 THR THR A . n
A 1 44 TYR 44 39 39 TYR TYR A . n
A 1 45 GLY 45 40 40 GLY GLY A . n
A 1 46 LYS 46 41 41 LYS LYS A . n
A 1 47 LEU 47 42 42 LEU LEU A . n
A 1 48 THR 48 43 43 THR THR A . n
A 1 49 LEU 49 44 44 LEU LEU A . n
A 1 50 LYS 50 45 45 LYS LYS A . n
A 1 51 PHE 51 46 46 PHE PHE A . n
A 1 52 ILE 52 47 47 ILE ILE A . n
A 1 53 CYS 53 48 48 CYS CYS A . n
A 1 54 THR 54 49 49 THR THR A . n
A 1 55 THR 55 50 50 THR THR A . n
A 1 56 GLY 56 51 51 GLY GLY A . n
A 1 57 LYS 57 52 52 LYS LYS A . n
A 1 58 LEU 58 53 53 LEU LEU A . n
A 1 59 PRO 59 54 54 PRO PRO A . n
A 1 60 VAL 60 55 55 VAL VAL A . n
A 1 61 PRO 61 56 56 PRO PRO A . n
A 1 62 TRP 62 57 57 TRP TRP A . n
A 1 63 PRO 63 58 58 PRO PRO A . n
A 1 64 THR 64 59 59 THR THR A . n
A 1 65 LEU 65 60 60 LEU LEU A . n
A 1 66 VAL 66 61 61 VAL VAL A . n
A 1 67 THR 67 62 62 THR THR A . n
A 1 68 THR 68 63 63 THR THR A . n
A 1 69 PHE 69 64 64 PHE PHE A . n
A 1 70 CR2 70 66 66 CR2 CR2 A . n
A 1 71 LEU 71 68 68 LEU LEU A . n
A 1 72 MET 72 69 69 MET MET A . n
A 1 73 CYS 73 70 70 CYS CYS A . n
A 1 74 PHE 74 71 71 PHE PHE A . n
A 1 75 ALA 75 72 72 ALA ALA A . n
A 1 76 ARG 76 73 73 ARG ARG A . n
A 1 77 TYR 77 74 74 TYR TYR A . n
A 1 78 PRO 78 75 75 PRO PRO A . n
A 1 79 ASP 79 76 76 ASP ASP A . n
A 1 80 HIS 80 77 77 HIS HIS A . n
A 1 81 MET 81 78 78 MET MET A . n
A 1 82 LYS 82 79 79 LYS LYS A . n
A 1 83 GLN 83 80 80 GLN GLN A . n
A 1 84 HIS 84 81 81 HIS HIS A . n
A 1 85 ASP 85 82 82 ASP ASP A . n
A 1 86 PHE 86 83 83 PHE PHE A . n
A 1 87 PHE 87 84 84 PHE PHE A . n
A 1 88 LYS 88 85 85 LYS LYS A . n
A 1 89 SER 89 86 86 SER SER A . n
A 1 90 ALA 90 87 87 ALA ALA A . n
A 1 91 MET 91 88 88 MET MET A . n
A 1 92 PRO 92 89 89 PRO PRO A . n
A 1 93 GLU 93 90 90 GLU GLU A . n
A 1 94 GLY 94 91 91 GLY GLY A . n
A 1 95 TYR 95 92 92 TYR TYR A . n
A 1 96 VAL 96 93 93 VAL VAL A . n
A 1 97 GLN 97 94 94 GLN GLN A . n
A 1 98 GLU 98 95 95 GLU GLU A . n
A 1 99 ARG 99 96 96 ARG ARG A . n
A 1 100 THR 100 97 97 THR THR A . n
A 1 101 ILE 101 98 98 ILE ILE A . n
A 1 102 PHE 102 99 99 PHE PHE A . n
A 1 103 PHE 103 100 100 PHE PHE A . n
A 1 104 LYS 104 101 101 LYS LYS A . n
A 1 105 ASP 105 102 102 ASP ASP A . n
A 1 106 ASP 106 103 103 ASP ASP A . n
A 1 107 GLY 107 104 104 GLY GLY A . n
A 1 108 ASN 108 105 105 ASN ASN A . n
A 1 109 TYR 109 106 106 TYR TYR A . n
A 1 110 LYS 110 107 107 LYS LYS A . n
A 1 111 THR 111 108 108 THR THR A . n
A 1 112 ARG 112 109 109 ARG ARG A . n
A 1 113 ALA 113 110 110 ALA ALA A . n
A 1 114 GLU 114 111 111 GLU GLU A . n
A 1 115 VAL 115 112 112 VAL VAL A . n
A 1 116 LYS 116 113 113 LYS LYS A . n
A 1 117 PHE 117 114 114 PHE PHE A . n
A 1 118 GLU 118 115 115 GLU GLU A . n
A 1 119 GLY 119 116 116 GLY GLY A . n
A 1 120 ASP 120 117 117 ASP ASP A . n
A 1 121 THR 121 118 118 THR THR A . n
A 1 122 LEU 122 119 119 LEU LEU A . n
A 1 123 VAL 123 120 120 VAL VAL A . n
A 1 124 ASN 124 121 121 ASN ASN A . n
A 1 125 ARG 125 122 122 ARG ARG A . n
A 1 126 ILE 126 123 123 ILE ILE A . n
A 1 127 GLU 127 124 124 GLU GLU A . n
A 1 128 LEU 128 125 125 LEU LEU A . n
A 1 129 LYS 129 126 126 LYS LYS A . n
A 1 130 GLY 130 127 127 GLY GLY A . n
A 1 131 ILE 131 128 128 ILE ILE A . n
A 1 132 ASP 132 129 129 ASP ASP A . n
A 1 133 PHE 133 130 130 PHE PHE A . n
A 1 134 LYS 134 131 131 LYS LYS A . n
A 1 135 GLU 135 132 132 GLU GLU A . n
A 1 136 ASP 136 133 133 ASP ASP A . n
A 1 137 GLY 137 134 134 GLY GLY A . n
A 1 138 ASN 138 135 135 ASN ASN A . n
A 1 139 ILE 139 136 136 ILE ILE A . n
A 1 140 LEU 140 137 137 LEU LEU A . n
A 1 141 GLY 141 138 138 GLY GLY A . n
A 1 142 HIS 142 139 139 HIS HIS A . n
A 1 143 LYS 143 140 140 LYS LYS A . n
A 1 144 LEU 144 141 141 LEU LEU A . n
A 1 145 GLU 145 142 142 GLU GLU A . n
A 1 146 TYR 146 143 143 TYR TYR A . n
A 1 147 ASN 147 144 144 ASN ASN A . n
A 1 148 TYR 148 145 145 TYR TYR A . n
A 1 149 ASN 149 146 146 ASN ASN A . n
A 1 150 SER 150 147 147 SER SER A . n
A 1 151 HIS 151 148 148 HIS HIS A . n
A 1 152 ASN 152 149 149 ASN ASN A . n
A 1 153 VAL 153 150 150 VAL VAL A . n
A 1 154 TYR 154 151 151 TYR TYR A . n
A 1 155 ILE 155 152 152 ILE ILE A . n
A 1 156 MET 156 153 153 MET MET A . n
A 1 157 ALA 157 154 154 ALA ALA A . n
A 1 158 ASP 158 155 155 ASP ASP A . n
A 1 159 LYS 159 156 156 LYS LYS A . n
A 1 160 GLN 160 157 157 GLN GLN A . n
A 1 161 LYS 161 158 158 LYS LYS A . n
A 1 162 ASN 162 159 159 ASN ASN A . n
A 1 163 GLY 163 160 160 GLY GLY A . n
A 1 164 ILE 164 161 161 ILE ILE A . n
A 1 165 LYS 165 162 162 LYS LYS A . n
A 1 166 VAL 166 163 163 VAL VAL A . n
A 1 167 ASN 167 164 164 ASN ASN A . n
A 1 168 PHE 168 165 165 PHE PHE A . n
A 1 169 LYS 169 166 166 LYS LYS A . n
A 1 170 ILE 170 167 167 ILE ILE A . n
A 1 171 ARG 171 168 168 ARG ARG A . n
A 1 172 HIS 172 169 169 HIS HIS A . n
A 1 173 ASN 173 170 170 ASN ASN A . n
A 1 174 ILE 174 171 171 ILE ILE A . n
A 1 175 GLU 175 172 172 GLU GLU A . n
A 1 176 ASP 176 173 173 ASP ASP A . n
A 1 177 GLY 177 174 174 GLY GLY A . n
A 1 178 SER 178 175 175 SER SER A . n
A 1 179 VAL 179 176 176 VAL VAL A . n
A 1 180 GLN 180 177 177 GLN GLN A . n
A 1 181 LEU 181 178 178 LEU LEU A . n
A 1 182 ALA 182 179 179 ALA ALA A . n
A 1 183 ASP 183 180 180 ASP ASP A . n
A 1 184 HIS 184 181 181 HIS HIS A . n
A 1 185 TYR 185 182 182 TYR TYR A . n
A 1 186 GLN 186 183 183 GLN GLN A . n
A 1 187 GLN 187 184 184 GLN GLN A . n
A 1 188 ASN 188 185 185 ASN ASN A . n
A 1 189 THR 189 186 186 THR THR A . n
A 1 190 PRO 190 187 187 PRO PRO A . n
A 1 191 ILE 191 188 188 ILE ILE A . n
A 1 192 GLY 192 189 189 GLY GLY A . n
A 1 193 ASP 193 190 190 ASP ASP A . n
A 1 194 GLY 194 191 191 GLY GLY A . n
A 1 195 PRO 195 192 192 PRO PRO A . n
A 1 196 VAL 196 193 193 VAL VAL A . n
A 1 197 LEU 197 194 194 LEU LEU A . n
A 1 198 LEU 198 195 195 LEU LEU A . n
A 1 199 PRO 199 196 196 PRO PRO A . n
A 1 200 ASP 200 197 197 ASP ASP A . n
A 1 201 ASN 201 198 198 ASN ASN A . n
A 1 202 HIS 202 199 199 HIS HIS A . n
A 1 203 TYR 203 200 200 TYR TYR A . n
A 1 204 LEU 204 201 201 LEU LEU A . n
A 1 205 SER 205 202 202 SER SER A . n
A 1 206 TYR 206 203 203 TYR TYR A . n
A 1 207 GLN 207 204 204 GLN GLN A . n
A 1 208 SER 208 205 205 SER SER A . n
A 1 209 ALA 209 206 206 ALA ALA A . n
A 1 210 LEU 210 207 207 LEU LEU A . n
A 1 211 SER 211 208 208 SER SER A . n
A 1 212 LYS 212 209 209 LYS LYS A . n
A 1 213 ASP 213 210 210 ASP ASP A . n
A 1 214 PRO 214 211 211 PRO PRO A . n
A 1 215 ASN 215 212 212 ASN ASN A . n
A 1 216 GLU 216 213 213 GLU GLU A . n
A 1 217 LYS 217 214 214 LYS LYS A . n
A 1 218 ARG 218 215 215 ARG ARG A . n
A 1 219 ASP 219 216 216 ASP ASP A . n
A 1 220 HIS 220 217 217 HIS HIS A . n
A 1 221 MET 221 218 218 MET MET A . n
A 1 222 VAL 222 219 219 VAL VAL A . n
A 1 223 LEU 223 220 220 LEU LEU A . n
A 1 224 LEU 224 221 221 LEU LEU A . n
A 1 225 GLU 225 222 222 GLU GLU A . n
A 1 226 PHE 226 223 223 PHE PHE A . n
A 1 227 VAL 227 224 224 VAL VAL A . n
A 1 228 THR 228 225 225 THR THR A . n
A 1 229 ALA 229 226 226 ALA ALA A . n
A 1 230 ALA 230 227 227 ALA ALA A . n
A 1 231 GLY 231 228 228 GLY GLY A . n
A 1 232 ILE 232 229 229 ILE ILE A . n
A 1 233 THR 233 230 230 THR THR A . n
A 1 234 LEU 234 231 ? ? ? A . n
A 1 235 GLY 235 232 ? ? ? A . n
A 1 236 MET 236 233 ? ? ? A . n
A 1 237 ASP 237 234 ? ? ? A . n
A 1 238 GLU 238 235 ? ? ? A . n
A 1 239 LEU 239 236 ? ? ? A . n
A 1 240 TYR 240 237 ? ? ? A . n
A 1 241 LYS 241 238 ? ? ? A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 239 1 HOH HOH A .
B 2 HOH 2 240 2 HOH HOH A .
B 2 HOH 3 241 3 HOH HOH A .
B 2 HOH 4 242 4 HOH HOH A .
B 2 HOH 5 243 5 HOH HOH A .
B 2 HOH 6 244 6 HOH HOH A .
B 2 HOH 7 245 7 HOH HOH A .
B 2 HOH 8 246 8 HOH HOH A .
B 2 HOH 9 247 9 HOH HOH A .
B 2 HOH 10 248 10 HOH HOH A .
B 2 HOH 11 249 11 HOH HOH A .
B 2 HOH 12 250 12 HOH HOH A .
B 2 HOH 13 251 13 HOH HOH A .
B 2 HOH 14 252 14 HOH HOH A .
B 2 HOH 15 253 15 HOH HOH A .
B 2 HOH 16 254 16 HOH HOH A .
B 2 HOH 17 255 17 HOH HOH A .
B 2 HOH 18 256 18 HOH HOH A .
B 2 HOH 19 257 19 HOH HOH A .
B 2 HOH 20 258 20 HOH HOH A .
B 2 HOH 21 259 21 HOH HOH A .
B 2 HOH 22 260 22 HOH HOH A .
B 2 HOH 23 261 23 HOH HOH A .
B 2 HOH 24 262 24 HOH HOH A .
B 2 HOH 25 263 25 HOH HOH A .
B 2 HOH 26 264 26 HOH HOH A .
B 2 HOH 27 265 27 HOH HOH A .
B 2 HOH 28 266 28 HOH HOH A .
B 2 HOH 29 267 29 HOH HOH A .
B 2 HOH 30 268 30 HOH HOH A .
B 2 HOH 31 269 31 HOH HOH A .
B 2 HOH 32 270 32 HOH HOH A .
B 2 HOH 33 271 33 HOH HOH A .
B 2 HOH 34 272 34 HOH HOH A .
B 2 HOH 35 273 35 HOH HOH A .
B 2 HOH 36 274 36 HOH HOH A .
B 2 HOH 37 275 37 HOH HOH A .
B 2 HOH 38 276 38 HOH HOH A .
B 2 HOH 39 277 39 HOH HOH A .
B 2 HOH 40 278 40 HOH HOH A .
B 2 HOH 41 279 41 HOH HOH A .
B 2 HOH 42 280 42 HOH HOH A .
B 2 HOH 43 281 43 HOH HOH A .
B 2 HOH 44 282 44 HOH HOH A .
B 2 HOH 45 283 45 HOH HOH A .
B 2 HOH 46 284 46 HOH HOH A .
B 2 HOH 47 285 47 HOH HOH A .
B 2 HOH 48 286 48 HOH HOH A .
B 2 HOH 49 287 49 HOH HOH A .
B 2 HOH 50 288 50 HOH HOH A .
B 2 HOH 51 289 51 HOH HOH A .
B 2 HOH 52 290 52 HOH HOH A .
B 2 HOH 53 291 53 HOH HOH A .
B 2 HOH 54 292 54 HOH HOH A .
B 2 HOH 55 293 55 HOH HOH A .
B 2 HOH 56 294 56 HOH HOH A .
B 2 HOH 57 295 57 HOH HOH A .
B 2 HOH 58 296 58 HOH HOH A .
B 2 HOH 59 297 59 HOH HOH A .
B 2 HOH 60 298 60 HOH HOH A .
B 2 HOH 61 299 61 HOH HOH A .
B 2 HOH 62 300 62 HOH HOH A .
B 2 HOH 63 301 63 HOH HOH A .
B 2 HOH 64 302 64 HOH HOH A .
B 2 HOH 65 303 65 HOH HOH A .
B 2 HOH 66 304 66 HOH HOH A .
B 2 HOH 67 305 67 HOH HOH A .
B 2 HOH 68 306 68 HOH HOH A .
B 2 HOH 69 307 69 HOH HOH A .
B 2 HOH 70 308 70 HOH HOH A .
B 2 HOH 71 309 71 HOH HOH A .
B 2 HOH 72 310 72 HOH HOH A .
B 2 HOH 73 311 73 HOH HOH A .
B 2 HOH 74 312 74 HOH HOH A .
B 2 HOH 75 313 75 HOH HOH A .
B 2 HOH 76 314 76 HOH HOH A .
B 2 HOH 77 315 77 HOH HOH A .
B 2 HOH 78 316 78 HOH HOH A .
B 2 HOH 79 317 79 HOH HOH A .
B 2 HOH 80 318 80 HOH HOH A .
B 2 HOH 81 319 81 HOH HOH A .
B 2 HOH 82 320 82 HOH HOH A .
B 2 HOH 83 321 83 HOH HOH A .
B 2 HOH 84 322 84 HOH HOH A .
B 2 HOH 85 323 85 HOH HOH A .
B 2 HOH 86 324 86 HOH HOH A .
B 2 HOH 87 325 87 HOH HOH A .
B 2 HOH 88 326 88 HOH HOH A .
B 2 HOH 89 327 89 HOH HOH A .
B 2 HOH 90 328 90 HOH HOH A .
B 2 HOH 91 329 91 HOH HOH A .
B 2 HOH 92 330 92 HOH HOH A .
B 2 HOH 93 331 93 HOH HOH A .
B 2 HOH 94 332 94 HOH HOH A .
B 2 HOH 95 333 95 HOH HOH A .
B 2 HOH 96 334 96 HOH HOH A .
B 2 HOH 97 335 97 HOH HOH A .
B 2 HOH 98 336 98 HOH HOH A .
B 2 HOH 99 337 99 HOH HOH A .
B 2 HOH 100 338 100 HOH HOH A .
B 2 HOH 101 339 101 HOH HOH A .
B 2 HOH 102 340 102 HOH HOH A .
B 2 HOH 103 341 103 HOH HOH A .
B 2 HOH 104 342 104 HOH HOH A .
B 2 HOH 105 343 105 HOH HOH A .
B 2 HOH 106 344 106 HOH HOH A .
B 2 HOH 107 345 107 HOH HOH A .
B 2 HOH 108 346 108 HOH HOH A .
B 2 HOH 109 347 109 HOH HOH A .
B 2 HOH 110 348 110 HOH HOH A .
B 2 HOH 111 349 111 HOH HOH A .
B 2 HOH 112 350 112 HOH HOH A .
B 2 HOH 113 351 113 HOH HOH A .
B 2 HOH 114 352 114 HOH HOH A .
B 2 HOH 115 353 115 HOH HOH A .
B 2 HOH 116 354 116 HOH HOH A .
B 2 HOH 117 355 117 HOH HOH A .
B 2 HOH 118 356 118 HOH HOH A .
B 2 HOH 119 357 119 HOH HOH A .
B 2 HOH 120 358 120 HOH HOH A .
B 2 HOH 121 359 121 HOH HOH A .
B 2 HOH 122 360 122 HOH HOH A .
B 2 HOH 123 361 123 HOH HOH A .
B 2 HOH 124 362 124 HOH HOH A .
B 2 HOH 125 363 125 HOH HOH A .
B 2 HOH 126 364 126 HOH HOH A .
B 2 HOH 127 365 127 HOH HOH A .
B 2 HOH 128 366 128 HOH HOH A .
B 2 HOH 129 367 129 HOH HOH A .
B 2 HOH 130 368 130 HOH HOH A .
B 2 HOH 131 369 131 HOH HOH A .
B 2 HOH 132 370 132 HOH HOH A .
B 2 HOH 133 371 133 HOH HOH A .
B 2 HOH 134 372 134 HOH HOH A .
B 2 HOH 135 373 135 HOH HOH A .
B 2 HOH 136 374 136 HOH HOH A .
B 2 HOH 137 375 137 HOH HOH A .
B 2 HOH 138 376 138 HOH HOH A .
B 2 HOH 139 377 139 HOH HOH A .
B 2 HOH 140 378 140 HOH HOH A .
B 2 HOH 141 379 141 HOH HOH A .
B 2 HOH 142 380 142 HOH HOH A .
B 2 HOH 143 381 143 HOH HOH A .
B 2 HOH 144 382 144 HOH HOH A .
B 2 HOH 145 383 145 HOH HOH A .
B 2 HOH 146 384 146 HOH HOH A .
B 2 HOH 147 385 147 HOH HOH A .
B 2 HOH 148 386 148 HOH HOH A .
B 2 HOH 149 387 149 HOH HOH A .
B 2 HOH 150 388 150 HOH HOH A .
B 2 HOH 151 389 151 HOH HOH A .
B 2 HOH 152 390 152 HOH HOH A .
B 2 HOH 153 391 153 HOH HOH A .
B 2 HOH 154 392 154 HOH HOH A .
B 2 HOH 155 393 155 HOH HOH A .
B 2 HOH 156 394 156 HOH HOH A .
B 2 HOH 157 395 157 HOH HOH A .
B 2 HOH 158 396 158 HOH HOH A .
B 2 HOH 159 397 159 HOH HOH A .
B 2 HOH 160 398 160 HOH HOH A .
B 2 HOH 161 399 161 HOH HOH A .
B 2 HOH 162 400 162 HOH HOH A .
B 2 HOH 163 401 163 HOH HOH A .
B 2 HOH 164 402 164 HOH HOH A .
B 2 HOH 165 403 165 HOH HOH A .
B 2 HOH 166 404 166 HOH HOH A .
B 2 HOH 167 405 167 HOH HOH A .
B 2 HOH 168 406 168 HOH HOH A .
B 2 HOH 169 407 169 HOH HOH A .
B 2 HOH 170 408 170 HOH HOH A .
B 2 HOH 171 409 171 HOH HOH A .
B 2 HOH 172 410 172 HOH HOH A .
B 2 HOH 173 411 173 HOH HOH A .
B 2 HOH 174 412 174 HOH HOH A .
B 2 HOH 175 413 175 HOH HOH A .
B 2 HOH 176 414 176 HOH HOH A .
B 2 HOH 177 415 177 HOH HOH A .
B 2 HOH 178 416 178 HOH HOH A .
B 2 HOH 179 417 179 HOH HOH A .
B 2 HOH 180 418 180 HOH HOH A .
B 2 HOH 181 419 181 HOH HOH A .
B 2 HOH 182 420 182 HOH HOH A .
B 2 HOH 183 421 183 HOH HOH A .
B 2 HOH 184 422 184 HOH HOH A .
B 2 HOH 185 423 185 HOH HOH A .
B 2 HOH 186 424 186 HOH HOH A .
B 2 HOH 187 425 187 HOH HOH A .
B 2 HOH 188 426 188 HOH HOH A .
B 2 HOH 189 427 189 HOH HOH A .
B 2 HOH 190 428 190 HOH HOH A .
B 2 HOH 191 429 191 HOH HOH A .
B 2 HOH 192 430 192 HOH HOH A .
B 2 HOH 193 431 193 HOH HOH A .
B 2 HOH 194 432 194 HOH HOH A .
B 2 HOH 195 433 195 HOH HOH A .
B 2 HOH 196 434 196 HOH HOH A .
B 2 HOH 197 435 197 HOH HOH A .
B 2 HOH 198 436 198 HOH HOH A .
B 2 HOH 199 437 199 HOH HOH A .
B 2 HOH 200 438 200 HOH HOH A .
B 2 HOH 201 439 201 HOH HOH A .
B 2 HOH 202 440 202 HOH HOH A .
B 2 HOH 203 441 203 HOH HOH A .
B 2 HOH 204 442 204 HOH HOH A .
B 2 HOH 205 443 205 HOH HOH A .
B 2 HOH 206 444 206 HOH HOH A .
B 2 HOH 207 445 207 HOH HOH A .
B 2 HOH 208 446 208 HOH HOH A .
B 2 HOH 209 447 209 HOH HOH A .
B 2 HOH 210 448 210 HOH HOH A .
B 2 HOH 211 449 211 HOH HOH A .
B 2 HOH 212 450 212 HOH HOH A .
B 2 HOH 213 451 213 HOH HOH A .
B 2 HOH 214 452 214 HOH HOH A .
B 2 HOH 215 453 215 HOH HOH A .
B 2 HOH 216 454 216 HOH HOH A .
B 2 HOH 217 455 217 HOH HOH A .
B 2 HOH 218 456 218 HOH HOH A .
B 2 HOH 219 457 219 HOH HOH A .
B 2 HOH 220 458 220 HOH HOH A .
B 2 HOH 221 459 221 HOH HOH A .
B 2 HOH 222 460 222 HOH HOH A .
B 2 HOH 223 461 223 HOH HOH A .
B 2 HOH 224 462 224 HOH HOH A .
B 2 HOH 225 463 225 HOH HOH A .
B 2 HOH 226 464 226 HOH HOH A .
B 2 HOH 227 465 227 HOH HOH A .
B 2 HOH 228 466 228 HOH HOH A .
B 2 HOH 229 467 229 HOH HOH A .
B 2 HOH 230 468 230 HOH HOH A .
B 2 HOH 231 469 231 HOH HOH A .
B 2 HOH 232 470 232 HOH HOH A .
B 2 HOH 233 471 233 HOH HOH A .
B 2 HOH 234 472 234 HOH HOH A .
B 2 HOH 235 473 235 HOH HOH A .
B 2 HOH 236 474 236 HOH HOH A .
B 2 HOH 237 475 237 HOH HOH A .
B 2 HOH 238 476 238 HOH HOH A .
B 2 HOH 239 477 239 HOH HOH A .
B 2 HOH 240 478 240 HOH HOH A .
B 2 HOH 241 479 241 HOH HOH A .
B 2 HOH 242 480 242 HOH HOH A .
B 2 HOH 243 481 243 HOH HOH A .
B 2 HOH 244 482 244 HOH HOH A .
B 2 HOH 245 483 245 HOH HOH A .
B 2 HOH 246 484 246 HOH HOH A .
B 2 HOH 247 485 247 HOH HOH A .
B 2 HOH 248 486 248 HOH HOH A .
B 2 HOH 249 487 249 HOH HOH A .
B 2 HOH 250 488 250 HOH HOH A .
B 2 HOH 251 489 251 HOH HOH A .
B 2 HOH 252 490 252 HOH HOH A .
B 2 HOH 253 491 253 HOH HOH A .
B 2 HOH 254 492 254 HOH HOH A .
B 2 HOH 255 493 255 HOH HOH A .
B 2 HOH 256 494 256 HOH HOH A .
B 2 HOH 257 495 257 HOH HOH A .
B 2 HOH 258 496 258 HOH HOH A .
B 2 HOH 259 497 259 HOH HOH A .
B 2 HOH 260 498 260 HOH HOH A .
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
SCALA 3.2.25 21/9/2006 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling'
http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 1
MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing
http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 2
REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement
http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3
PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction'
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4
ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5
DPS . ? ? ? ? 'data reduction' ? ? ? 6
#
_cell.entry_id 3DQD
_cell.length_a 51.193
_cell.length_b 62.977
_cell.length_c 71.128
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 4
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3DQD
_symmetry.space_group_name_H-M 'P 21 21 21'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 19
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3DQD
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.09
_exptl_crystal.density_percent_sol 41.23
_exptl_crystal.description
;Crystal structure of the Yellow Fluorescent Protein Citrine frozen at 1250 atmospheres. Structure 12 of 26 in a series of high pressure structures. Crystal was high pressure cryo-cooled at 1250 atmospheres in helium gas. Crystal temperature was maintained below 100 K prior to data collection at ambient pressure and 100 K. High pressure cryo-cooling procedure is described in secondary citation 1 (Kim et al., Acta Cryst. D61:881-890). Structure referred to as citrine1250_2 in primary citation (Barstow et al.).
;
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 277
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 5.0
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details
;Crystals grown by seeding using a Seed Bead (HR2-320, Hampton Research) in 5% PEG 3350, 50 mM Na Acetate, 50 mM NH4 Acetate, pH 5.0. Crystals were grown at 4 deg C and at ambient pressure, VAPOR DIFFUSION, HANGING DROP, temperature 277K
;
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 210'
_diffrn_detector.pdbx_collection_date 2005-11-05
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111) DOUBLE CRYSTAL'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9795
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'CHESS BEAMLINE F2'
_diffrn_source.pdbx_synchrotron_site CHESS
_diffrn_source.pdbx_synchrotron_beamline F2
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.9795
#
_reflns.entry_id 3DQD
_reflns.observed_criterion_sigma_I ?
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 39.72
_reflns.d_resolution_high 1.40
_reflns.number_obs 27256
_reflns.number_all ?
_reflns.percent_possible_obs 59.3
_reflns.pdbx_Rmerge_I_obs 0.064
_reflns.pdbx_Rsym_value 0.064
_reflns.pdbx_netI_over_sigmaI 10.300
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 4.600
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 1.40
_reflns_shell.d_res_low ?
_reflns_shell.percent_possible_all 100.00
_reflns_shell.Rmerge_I_obs 0.303
_reflns_shell.pdbx_Rsym_value 0.303
_reflns_shell.meanI_over_sigI_obs 2.5
_reflns_shell.pdbx_redundancy 4.70
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3DQD
_refine.ls_number_reflns_obs 25884
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 20.00
_refine.ls_d_res_high 1.40
_refine.ls_percent_reflns_obs 59.31
_refine.ls_R_factor_obs 0.21605
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.21271
_refine.ls_R_factor_R_free 0.28004
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.0
_refine.ls_number_reflns_R_free 1355
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min 1.00
_refine.occupancy_max 1.00
_refine.correlation_coeff_Fo_to_Fc 0.959
_refine.correlation_coeff_Fo_to_Fc_free 0.919
_refine.B_iso_mean 27.484
_refine.aniso_B[1][1] -0.06
_refine.aniso_B[2][2] -0.09
_refine.aniso_B[3][3] 0.15
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details
;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. This structure is refined slightly differently from the corresponding structure used for analysis in the primary citation (Barstow et al.). However, analysis of the deformation motion of the chromophore under pressure in this sequence of deposited structures produces an identical deformation trend. For copies of the structures as used in the analysis in the primary citation please contact the authors.
;
_refine.pdbx_starting_model 'PDB ENTRY 1HUY WITH RESIDUE 80 MUTATED TO GLUTAMINE'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.125
_refine.pdbx_overall_ESU_R_Free 0.136
_refine.overall_SU_ML 0.102
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 2.711
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1850
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 260
_refine_hist.number_atoms_total 2110
_refine_hist.d_res_high 1.40
_refine_hist.d_res_low 20.00
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.025 0.022 ? 1896 'X-RAY DIFFRACTION' ?
r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 2.251 1.966 ? 2559 'X-RAY DIFFRACTION' ?
r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 7.212 5.000 ? 228 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 32.629 25.109 ? 92 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 17.993 15.000 ? 324 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 13.143 15.000 ? 6 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.150 0.200 ? 272 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.010 0.020 ? 1451 'X-RAY DIFFRACTION' ?
r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.262 0.200 ? 974 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.306 0.200 ? 1218 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.186 0.200 ? 206 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.215 0.200 ? 44 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.214 0.200 ? 10 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 1.812 1.500 ? 1171 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it 2.116 2.000 ? 1841 'X-RAY DIFFRACTION' ?
r_scbond_it 3.856 3.000 ? 816 'X-RAY DIFFRACTION' ?
r_scangle_it 5.592 4.500 ? 718 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.400
_refine_ls_shell.d_res_low 1.436
_refine_ls_shell.number_reflns_R_work 1
_refine_ls_shell.R_factor_R_work 0.552
_refine_ls_shell.percent_reflns_obs 0.06
_refine_ls_shell.R_factor_R_free 0.789
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 1
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 3DQD
_struct.title
;Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 2: Structure 12 in a Series of 26 High Pressure Structures
;
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag N
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3DQD
_struct_keywords.text
;Yellow Fluorescent Protein, beta barrel, chromophore, fluorescent protein, high pressure, Luminescence, Photoprotein, LUMINESCENT PROTEIN
;
_struct_keywords.pdbx_keywords 'LUMINESCENT PROTEIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code GFP_AEQVI
_struct_ref.pdbx_db_accession P42212
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQH
DFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGI
KVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK
;
_struct_ref.pdbx_align_begin 2
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3DQD
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 7
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 241
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P42212
_struct_ref_seq.db_align_beg 2
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 238
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 2
_struct_ref_seq.pdbx_auth_seq_align_end 238
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 3DQD GLY A 1 ? UNP P42212 ? ? 'expression tag' -4 1
1 3DQD ASP A 2 ? UNP P42212 ? ? 'expression tag' -3 2
1 3DQD ASP A 3 ? UNP P42212 ? ? 'expression tag' -2 3
1 3DQD PRO A 4 ? UNP P42212 ? ? 'expression tag' -1 4
1 3DQD MET A 5 ? UNP P42212 ? ? 'expression tag' 0 5
1 3DQD VAL A 6 ? UNP P42212 ? ? 'expression tag' 1 6
1 3DQD CR2 A 70 ? UNP P42212 SER 65 chromophore 66 7
1 3DQD CR2 A 70 ? UNP P42212 TYR 66 chromophore 66 8
1 3DQD CR2 A 70 ? UNP P42212 GLY 67 chromophore 66 9
1 3DQD LEU A 71 ? UNP P42212 VAL 68 'engineered mutation' 68 10
1 3DQD MET A 72 ? UNP P42212 GLN 69 'engineered mutation' 69 11
1 3DQD ALA A 75 ? UNP P42212 SER 72 'engineered mutation' 72 12
1 3DQD TYR A 206 ? UNP P42212 THR 203 'engineered mutation' 203 13
1 3DQD LEU A 234 ? UNP P42212 HIS 231 'engineered mutation' 231 14
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASP A 3 ? THR A 14 ? ASP A -2 THR A 9 1 ? 12
HELX_P HELX_P2 2 ALA A 42 ? TYR A 44 ? ALA A 37 TYR A 39 5 ? 3
HELX_P HELX_P3 3 PRO A 61 ? VAL A 66 ? PRO A 56 VAL A 61 5 ? 6
HELX_P HELX_P4 4 LEU A 71 ? ALA A 75 ? LEU A 68 ALA A 72 5 ? 5
HELX_P HELX_P5 5 PRO A 78 ? HIS A 84 ? PRO A 75 HIS A 81 5 ? 7
HELX_P HELX_P6 6 ASP A 85 ? ALA A 90 ? ASP A 82 ALA A 87 1 ? 6
HELX_P HELX_P7 7 LYS A 159 ? ASN A 162 ? LYS A 156 ASN A 159 5 ? 4
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A PHE 69 C ? ? ? 1_555 A CR2 70 N1 ? ? A PHE 64 A CR2 66 1_555 ? ? ? ? ? ? ? 1.337 ? ?
covale2 covale both ? A CR2 70 C3 ? ? ? 1_555 A LEU 71 N ? ? A CR2 66 A LEU 68 1_555 ? ? ? ? ? ? ? 1.301 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
_pdbx_modification_feature.ordinal 1
_pdbx_modification_feature.label_comp_id CR2
_pdbx_modification_feature.label_asym_id A
_pdbx_modification_feature.label_seq_id 70
_pdbx_modification_feature.label_alt_id ?
_pdbx_modification_feature.modified_residue_label_comp_id .
_pdbx_modification_feature.modified_residue_label_asym_id .
_pdbx_modification_feature.modified_residue_label_seq_id .
_pdbx_modification_feature.modified_residue_label_alt_id .
_pdbx_modification_feature.auth_comp_id CR2
_pdbx_modification_feature.auth_asym_id A
_pdbx_modification_feature.auth_seq_id 66
_pdbx_modification_feature.PDB_ins_code ?
_pdbx_modification_feature.symmetry 1_555
_pdbx_modification_feature.modified_residue_auth_comp_id .
_pdbx_modification_feature.modified_residue_auth_asym_id .
_pdbx_modification_feature.modified_residue_auth_seq_id .
_pdbx_modification_feature.modified_residue_PDB_ins_code .
_pdbx_modification_feature.modified_residue_symmetry .
_pdbx_modification_feature.comp_id_linking_atom .
_pdbx_modification_feature.modified_residue_id_linking_atom .
_pdbx_modification_feature.modified_residue_id 'GLY, TYR, GLY'
_pdbx_modification_feature.ref_pcm_id 1
_pdbx_modification_feature.ref_comp_id CR2
_pdbx_modification_feature.type None
_pdbx_modification_feature.category Chromophore/chromophore-like
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id MET
_struct_mon_prot_cis.label_seq_id 91
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id MET
_struct_mon_prot_cis.auth_seq_id 88
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_label_seq_id_2 92
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_auth_seq_id_2 89
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle 0.04
#
_struct_sheet.id A
_struct_sheet.type ?
_struct_sheet.number_strands 12
_struct_sheet.details ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
A 5 6 ? anti-parallel
A 6 7 ? anti-parallel
A 7 8 ? anti-parallel
A 8 9 ? anti-parallel
A 9 10 ? anti-parallel
A 10 11 ? anti-parallel
A 11 12 ? parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 VAL A 17 ? VAL A 27 ? VAL A 12 VAL A 22
A 2 HIS A 30 ? ASP A 41 ? HIS A 25 ASP A 36
A 3 LYS A 46 ? CYS A 53 ? LYS A 41 CYS A 48
A 4 HIS A 220 ? ALA A 230 ? HIS A 217 ALA A 227
A 5 HIS A 202 ? SER A 211 ? HIS A 199 SER A 208
A 6 HIS A 151 ? ASP A 158 ? HIS A 148 ASP A 155
A 7 GLY A 163 ? ASN A 173 ? GLY A 160 ASN A 170
A 8 VAL A 179 ? PRO A 190 ? VAL A 176 PRO A 187
A 9 TYR A 95 ? PHE A 103 ? TYR A 92 PHE A 100
A 10 ASN A 108 ? GLU A 118 ? ASN A 105 GLU A 115
A 11 THR A 121 ? ILE A 131 ? THR A 118 ILE A 128
A 12 VAL A 17 ? VAL A 27 ? VAL A 12 VAL A 22
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N GLY A 25 ? N GLY A 20 O PHE A 32 ? O PHE A 27
A 2 3 N SER A 35 ? N SER A 30 O ILE A 52 ? O ILE A 47
A 3 4 N PHE A 51 ? N PHE A 46 O MET A 221 ? O MET A 218
A 4 5 O VAL A 222 ? O VAL A 219 N SER A 211 ? N SER A 208
A 5 6 O HIS A 202 ? O HIS A 199 N ILE A 155 ? N ILE A 152
A 6 7 N MET A 156 ? N MET A 153 O LYS A 165 ? O LYS A 162
A 7 8 N PHE A 168 ? N PHE A 165 O HIS A 184 ? O HIS A 181
A 8 9 O GLN A 187 ? O GLN A 184 N GLU A 98 ? N GLU A 95
A 9 10 N TYR A 95 ? N TYR A 92 O VAL A 115 ? O VAL A 112
A 10 11 N LYS A 116 ? N LYS A 113 O VAL A 123 ? O VAL A 120
A 11 12 O ILE A 126 ? O ILE A 123 N GLU A 22 ? N GLU A 17
#
_pdbx_entry_details.entry_id 3DQD
_pdbx_entry_details.sequence_details
;RESIDUE SER 65 HAS BEEN MUTATED TO GLY 65.
RESIDUES GLY 65, TYR 66 AND GLY 67 CONSTITUTE THE
CHROMOPHORE CR2 66.
;
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 CB A ASP 19 ? ? CG A ASP 19 ? ? OD1 A ASP 19 ? ? 125.24 118.30 6.94 0.90 N
2 1 CB A ASP 82 ? ? CG A ASP 82 ? ? OD2 A ASP 82 ? ? 112.41 118.30 -5.89 0.90 N
3 1 CA A LEU 178 ? ? CB A LEU 178 ? ? CG A LEU 178 ? ? 99.85 115.30 -15.45 2.30 N
4 1 CB A LEU 178 ? ? CG A LEU 178 ? ? CD1 A LEU 178 ? ? 126.05 111.00 15.05 1.70 N
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ILE
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 136
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -91.48
_pdbx_validate_torsion.psi -66.42
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A CR2 70 A CR2 66 ? GLY ?
2 A CR2 70 A CR2 66 ? TYR ?
3 A CR2 70 A CR2 66 ? GLY ?
#
_pdbx_phasing_MR.entry_id 3DQD
_pdbx_phasing_MR.method_rotation ?
_pdbx_phasing_MR.method_translation ?
_pdbx_phasing_MR.model_details ?
_pdbx_phasing_MR.R_factor ?
_pdbx_phasing_MR.R_rigid_body ?
_pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ?
_pdbx_phasing_MR.correlation_coeff_Io_to_Ic ?
_pdbx_phasing_MR.d_res_high_rotation 1.980
_pdbx_phasing_MR.d_res_low_rotation 35.560
_pdbx_phasing_MR.d_res_high_translation 1.980
_pdbx_phasing_MR.d_res_low_translation 35.560
_pdbx_phasing_MR.packing ?
_pdbx_phasing_MR.reflns_percent_rotation ?
_pdbx_phasing_MR.reflns_percent_translation ?
_pdbx_phasing_MR.sigma_F_rotation ?
_pdbx_phasing_MR.sigma_F_translation ?
_pdbx_phasing_MR.sigma_I_rotation ?
_pdbx_phasing_MR.sigma_I_translation ?
#
_phasing.method MR
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A GLY -4 ? A GLY 1
2 1 Y 1 A ASP -3 ? A ASP 2
3 1 Y 1 A LEU 231 ? A LEU 234
4 1 Y 1 A GLY 232 ? A GLY 235
5 1 Y 1 A MET 233 ? A MET 236
6 1 Y 1 A ASP 234 ? A ASP 237
7 1 Y 1 A GLU 235 ? A GLU 238
8 1 Y 1 A LEU 236 ? A LEU 239
9 1 Y 1 A TYR 237 ? A TYR 240
10 1 Y 1 A LYS 238 ? A LYS 241
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CR2 N1 N N N 74
CR2 CA1 C N N 75
CR2 C1 C N N 76
CR2 N2 N N N 77
CR2 N3 N N N 78
CR2 C2 C N N 79
CR2 O2 O N N 80
CR2 CA2 C N N 81
CR2 CA3 C N N 82
CR2 C3 C N N 83
CR2 O3 O N N 84
CR2 CB2 C N N 85
CR2 CG2 C Y N 86
CR2 CD1 C Y N 87
CR2 CD2 C Y N 88
CR2 CE1 C Y N 89
CR2 CE2 C Y N 90
CR2 CZ C Y N 91
CR2 OH O N N 92
CR2 OXT O N N 93
CR2 H H N N 94
CR2 H2 H N N 95
CR2 HA1 H N N 96
CR2 HA12 H N N 97
CR2 HA31 H N N 98
CR2 HA32 H N N 99
CR2 HB2 H N N 100
CR2 HD1 H N N 101
CR2 HD2 H N N 102
CR2 HE1 H N N 103
CR2 HE2 H N N 104
CR2 HOH H N N 105
CR2 HXT H N N 106
CYS N N N N 107
CYS CA C N R 108
CYS C C N N 109
CYS O O N N 110
CYS CB C N N 111
CYS SG S N N 112
CYS OXT O N N 113
CYS H H N N 114
CYS H2 H N N 115
CYS HA H N N 116
CYS HB2 H N N 117
CYS HB3 H N N 118
CYS HG H N N 119
CYS HXT H N N 120
GLN N N N N 121
GLN CA C N S 122
GLN C C N N 123
GLN O O N N 124
GLN CB C N N 125
GLN CG C N N 126
GLN CD C N N 127
GLN OE1 O N N 128
GLN NE2 N N N 129
GLN OXT O N N 130
GLN H H N N 131
GLN H2 H N N 132
GLN HA H N N 133
GLN HB2 H N N 134
GLN HB3 H N N 135
GLN HG2 H N N 136
GLN HG3 H N N 137
GLN HE21 H N N 138
GLN HE22 H N N 139
GLN HXT H N N 140
GLU N N N N 141
GLU CA C N S 142
GLU C C N N 143
GLU O O N N 144
GLU CB C N N 145
GLU CG C N N 146
GLU CD C N N 147
GLU OE1 O N N 148
GLU OE2 O N N 149
GLU OXT O N N 150
GLU H H N N 151
GLU H2 H N N 152
GLU HA H N N 153
GLU HB2 H N N 154
GLU HB3 H N N 155
GLU HG2 H N N 156
GLU HG3 H N N 157
GLU HE2 H N N 158
GLU HXT H N N 159
GLY N N N N 160
GLY CA C N N 161
GLY C C N N 162
GLY O O N N 163
GLY OXT O N N 164
GLY H H N N 165
GLY H2 H N N 166
GLY HA2 H N N 167
GLY HA3 H N N 168
GLY HXT H N N 169
HIS N N N N 170
HIS CA C N S 171
HIS C C N N 172
HIS O O N N 173
HIS CB C N N 174
HIS CG C Y N 175
HIS ND1 N Y N 176
HIS CD2 C Y N 177
HIS CE1 C Y N 178
HIS NE2 N Y N 179
HIS OXT O N N 180
HIS H H N N 181
HIS H2 H N N 182
HIS HA H N N 183
HIS HB2 H N N 184
HIS HB3 H N N 185
HIS HD1 H N N 186
HIS HD2 H N N 187
HIS HE1 H N N 188
HIS HE2 H N N 189
HIS HXT H N N 190
HOH O O N N 191
HOH H1 H N N 192
HOH H2 H N N 193
ILE N N N N 194
ILE CA C N S 195
ILE C C N N 196
ILE O O N N 197
ILE CB C N S 198
ILE CG1 C N N 199
ILE CG2 C N N 200
ILE CD1 C N N 201
ILE OXT O N N 202
ILE H H N N 203
ILE H2 H N N 204
ILE HA H N N 205
ILE HB H N N 206
ILE HG12 H N N 207
ILE HG13 H N N 208
ILE HG21 H N N 209
ILE HG22 H N N 210
ILE HG23 H N N 211
ILE HD11 H N N 212
ILE HD12 H N N 213
ILE HD13 H N N 214
ILE HXT H N N 215
LEU N N N N 216
LEU CA C N S 217
LEU C C N N 218
LEU O O N N 219
LEU CB C N N 220
LEU CG C N N 221
LEU CD1 C N N 222
LEU CD2 C N N 223
LEU OXT O N N 224
LEU H H N N 225
LEU H2 H N N 226
LEU HA H N N 227
LEU HB2 H N N 228
LEU HB3 H N N 229
LEU HG H N N 230
LEU HD11 H N N 231
LEU HD12 H N N 232
LEU HD13 H N N 233
LEU HD21 H N N 234
LEU HD22 H N N 235
LEU HD23 H N N 236
LEU HXT H N N 237
LYS N N N N 238
LYS CA C N S 239
LYS C C N N 240
LYS O O N N 241
LYS CB C N N 242
LYS CG C N N 243
LYS CD C N N 244
LYS CE C N N 245
LYS NZ N N N 246
LYS OXT O N N 247
LYS H H N N 248
LYS H2 H N N 249
LYS HA H N N 250
LYS HB2 H N N 251
LYS HB3 H N N 252
LYS HG2 H N N 253
LYS HG3 H N N 254
LYS HD2 H N N 255
LYS HD3 H N N 256
LYS HE2 H N N 257
LYS HE3 H N N 258
LYS HZ1 H N N 259
LYS HZ2 H N N 260
LYS HZ3 H N N 261
LYS HXT H N N 262
MET N N N N 263
MET CA C N S 264
MET C C N N 265
MET O O N N 266
MET CB C N N 267
MET CG C N N 268
MET SD S N N 269
MET CE C N N 270
MET OXT O N N 271
MET H H N N 272
MET H2 H N N 273
MET HA H N N 274
MET HB2 H N N 275
MET HB3 H N N 276
MET HG2 H N N 277
MET HG3 H N N 278
MET HE1 H N N 279
MET HE2 H N N 280
MET HE3 H N N 281
MET HXT H N N 282
PHE N N N N 283
PHE CA C N S 284
PHE C C N N 285
PHE O O N N 286
PHE CB C N N 287
PHE CG C Y N 288
PHE CD1 C Y N 289
PHE CD2 C Y N 290
PHE CE1 C Y N 291
PHE CE2 C Y N 292
PHE CZ C Y N 293
PHE OXT O N N 294
PHE H H N N 295
PHE H2 H N N 296
PHE HA H N N 297
PHE HB2 H N N 298
PHE HB3 H N N 299
PHE HD1 H N N 300
PHE HD2 H N N 301
PHE HE1 H N N 302
PHE HE2 H N N 303
PHE HZ H N N 304
PHE HXT H N N 305
PRO N N N N 306
PRO CA C N S 307
PRO C C N N 308
PRO O O N N 309
PRO CB C N N 310
PRO CG C N N 311
PRO CD C N N 312
PRO OXT O N N 313
PRO H H N N 314
PRO HA H N N 315
PRO HB2 H N N 316
PRO HB3 H N N 317
PRO HG2 H N N 318
PRO HG3 H N N 319
PRO HD2 H N N 320
PRO HD3 H N N 321
PRO HXT H N N 322
SER N N N N 323
SER CA C N S 324
SER C C N N 325
SER O O N N 326
SER CB C N N 327
SER OG O N N 328
SER OXT O N N 329
SER H H N N 330
SER H2 H N N 331
SER HA H N N 332
SER HB2 H N N 333
SER HB3 H N N 334
SER HG H N N 335
SER HXT H N N 336
THR N N N N 337
THR CA C N S 338
THR C C N N 339
THR O O N N 340
THR CB C N R 341
THR OG1 O N N 342
THR CG2 C N N 343
THR OXT O N N 344
THR H H N N 345
THR H2 H N N 346
THR HA H N N 347
THR HB H N N 348
THR HG1 H N N 349
THR HG21 H N N 350
THR HG22 H N N 351
THR HG23 H N N 352
THR HXT H N N 353
TRP N N N N 354
TRP CA C N S 355
TRP C C N N 356
TRP O O N N 357
TRP CB C N N 358
TRP CG C Y N 359
TRP CD1 C Y N 360
TRP CD2 C Y N 361
TRP NE1 N Y N 362
TRP CE2 C Y N 363
TRP CE3 C Y N 364
TRP CZ2 C Y N 365
TRP CZ3 C Y N 366
TRP CH2 C Y N 367
TRP OXT O N N 368
TRP H H N N 369
TRP H2 H N N 370
TRP HA H N N 371
TRP HB2 H N N 372
TRP HB3 H N N 373
TRP HD1 H N N 374
TRP HE1 H N N 375
TRP HE3 H N N 376
TRP HZ2 H N N 377
TRP HZ3 H N N 378
TRP HH2 H N N 379
TRP HXT H N N 380
TYR N N N N 381
TYR CA C N S 382
TYR C C N N 383
TYR O O N N 384
TYR CB C N N 385
TYR CG C Y N 386
TYR CD1 C Y N 387
TYR CD2 C Y N 388
TYR CE1 C Y N 389
TYR CE2 C Y N 390
TYR CZ C Y N 391
TYR OH O N N 392
TYR OXT O N N 393
TYR H H N N 394
TYR H2 H N N 395
TYR HA H N N 396
TYR HB2 H N N 397
TYR HB3 H N N 398
TYR HD1 H N N 399
TYR HD2 H N N 400
TYR HE1 H N N 401
TYR HE2 H N N 402
TYR HH H N N 403
TYR HXT H N N 404
VAL N N N N 405
VAL CA C N S 406
VAL C C N N 407
VAL O O N N 408
VAL CB C N N 409
VAL CG1 C N N 410
VAL CG2 C N N 411
VAL OXT O N N 412
VAL H H N N 413
VAL H2 H N N 414
VAL HA H N N 415
VAL HB H N N 416
VAL HG11 H N N 417
VAL HG12 H N N 418
VAL HG13 H N N 419
VAL HG21 H N N 420
VAL HG22 H N N 421
VAL HG23 H N N 422
VAL HXT H N N 423
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CR2 O3 C3 doub N N 70
CR2 CA3 C3 sing N N 71
CR2 CA3 N3 sing N N 72
CR2 C3 OXT sing N N 73
CR2 N1 CA1 sing N N 74
CR2 O2 C2 doub N N 75
CR2 N3 C2 sing N N 76
CR2 N3 C1 sing N N 77
CR2 C2 CA2 sing N N 78
CR2 CA1 C1 sing N N 79
CR2 C1 N2 doub N N 80
CR2 CA2 N2 sing N N 81
CR2 CA2 CB2 doub N Z 82
CR2 CB2 CG2 sing N N 83
CR2 CG2 CD2 doub Y N 84
CR2 CG2 CD1 sing Y N 85
CR2 CD2 CE2 sing Y N 86
CR2 CD1 CE1 doub Y N 87
CR2 CE2 CZ doub Y N 88
CR2 CE1 CZ sing Y N 89
CR2 CZ OH sing N N 90
CR2 N1 H sing N N 91
CR2 N1 H2 sing N N 92
CR2 CA1 HA1 sing N N 93
CR2 CA1 HA12 sing N N 94
CR2 CA3 HA31 sing N N 95
CR2 CA3 HA32 sing N N 96
CR2 CB2 HB2 sing N N 97
CR2 CD1 HD1 sing N N 98
CR2 CD2 HD2 sing N N 99
CR2 CE1 HE1 sing N N 100
CR2 CE2 HE2 sing N N 101
CR2 OH HOH sing N N 102
CR2 OXT HXT sing N N 103
CYS N CA sing N N 104
CYS N H sing N N 105
CYS N H2 sing N N 106
CYS CA C sing N N 107
CYS CA CB sing N N 108
CYS CA HA sing N N 109
CYS C O doub N N 110
CYS C OXT sing N N 111
CYS CB SG sing N N 112
CYS CB HB2 sing N N 113
CYS CB HB3 sing N N 114
CYS SG HG sing N N 115
CYS OXT HXT sing N N 116
GLN N CA sing N N 117
GLN N H sing N N 118
GLN N H2 sing N N 119
GLN CA C sing N N 120
GLN CA CB sing N N 121
GLN CA HA sing N N 122
GLN C O doub N N 123
GLN C OXT sing N N 124
GLN CB CG sing N N 125
GLN CB HB2 sing N N 126
GLN CB HB3 sing N N 127
GLN CG CD sing N N 128
GLN CG HG2 sing N N 129
GLN CG HG3 sing N N 130
GLN CD OE1 doub N N 131
GLN CD NE2 sing N N 132
GLN NE2 HE21 sing N N 133
GLN NE2 HE22 sing N N 134
GLN OXT HXT sing N N 135
GLU N CA sing N N 136
GLU N H sing N N 137
GLU N H2 sing N N 138
GLU CA C sing N N 139
GLU CA CB sing N N 140
GLU CA HA sing N N 141
GLU C O doub N N 142
GLU C OXT sing N N 143
GLU CB CG sing N N 144
GLU CB HB2 sing N N 145
GLU CB HB3 sing N N 146
GLU CG CD sing N N 147
GLU CG HG2 sing N N 148
GLU CG HG3 sing N N 149
GLU CD OE1 doub N N 150
GLU CD OE2 sing N N 151
GLU OE2 HE2 sing N N 152
GLU OXT HXT sing N N 153
GLY N CA sing N N 154
GLY N H sing N N 155
GLY N H2 sing N N 156
GLY CA C sing N N 157
GLY CA HA2 sing N N 158
GLY CA HA3 sing N N 159
GLY C O doub N N 160
GLY C OXT sing N N 161
GLY OXT HXT sing N N 162
HIS N CA sing N N 163
HIS N H sing N N 164
HIS N H2 sing N N 165
HIS CA C sing N N 166
HIS CA CB sing N N 167
HIS CA HA sing N N 168
HIS C O doub N N 169
HIS C OXT sing N N 170
HIS CB CG sing N N 171
HIS CB HB2 sing N N 172
HIS CB HB3 sing N N 173
HIS CG ND1 sing Y N 174
HIS CG CD2 doub Y N 175
HIS ND1 CE1 doub Y N 176
HIS ND1 HD1 sing N N 177
HIS CD2 NE2 sing Y N 178
HIS CD2 HD2 sing N N 179
HIS CE1 NE2 sing Y N 180
HIS CE1 HE1 sing N N 181
HIS NE2 HE2 sing N N 182
HIS OXT HXT sing N N 183
HOH O H1 sing N N 184
HOH O H2 sing N N 185
ILE N CA sing N N 186
ILE N H sing N N 187
ILE N H2 sing N N 188
ILE CA C sing N N 189
ILE CA CB sing N N 190
ILE CA HA sing N N 191
ILE C O doub N N 192
ILE C OXT sing N N 193
ILE CB CG1 sing N N 194
ILE CB CG2 sing N N 195
ILE CB HB sing N N 196
ILE CG1 CD1 sing N N 197
ILE CG1 HG12 sing N N 198
ILE CG1 HG13 sing N N 199
ILE CG2 HG21 sing N N 200
ILE CG2 HG22 sing N N 201
ILE CG2 HG23 sing N N 202
ILE CD1 HD11 sing N N 203
ILE CD1 HD12 sing N N 204
ILE CD1 HD13 sing N N 205
ILE OXT HXT sing N N 206
LEU N CA sing N N 207
LEU N H sing N N 208
LEU N H2 sing N N 209
LEU CA C sing N N 210
LEU CA CB sing N N 211
LEU CA HA sing N N 212
LEU C O doub N N 213
LEU C OXT sing N N 214
LEU CB CG sing N N 215
LEU CB HB2 sing N N 216
LEU CB HB3 sing N N 217
LEU CG CD1 sing N N 218
LEU CG CD2 sing N N 219
LEU CG HG sing N N 220
LEU CD1 HD11 sing N N 221
LEU CD1 HD12 sing N N 222
LEU CD1 HD13 sing N N 223
LEU CD2 HD21 sing N N 224
LEU CD2 HD22 sing N N 225
LEU CD2 HD23 sing N N 226
LEU OXT HXT sing N N 227
LYS N CA sing N N 228
LYS N H sing N N 229
LYS N H2 sing N N 230
LYS CA C sing N N 231
LYS CA CB sing N N 232
LYS CA HA sing N N 233
LYS C O doub N N 234
LYS C OXT sing N N 235
LYS CB CG sing N N 236
LYS CB HB2 sing N N 237
LYS CB HB3 sing N N 238
LYS CG CD sing N N 239
LYS CG HG2 sing N N 240
LYS CG HG3 sing N N 241
LYS CD CE sing N N 242
LYS CD HD2 sing N N 243
LYS CD HD3 sing N N 244
LYS CE NZ sing N N 245
LYS CE HE2 sing N N 246
LYS CE HE3 sing N N 247
LYS NZ HZ1 sing N N 248
LYS NZ HZ2 sing N N 249
LYS NZ HZ3 sing N N 250
LYS OXT HXT sing N N 251
MET N CA sing N N 252
MET N H sing N N 253
MET N H2 sing N N 254
MET CA C sing N N 255
MET CA CB sing N N 256
MET CA HA sing N N 257
MET C O doub N N 258
MET C OXT sing N N 259
MET CB CG sing N N 260
MET CB HB2 sing N N 261
MET CB HB3 sing N N 262
MET CG SD sing N N 263
MET CG HG2 sing N N 264
MET CG HG3 sing N N 265
MET SD CE sing N N 266
MET CE HE1 sing N N 267
MET CE HE2 sing N N 268
MET CE HE3 sing N N 269
MET OXT HXT sing N N 270
PHE N CA sing N N 271
PHE N H sing N N 272
PHE N H2 sing N N 273
PHE CA C sing N N 274
PHE CA CB sing N N 275
PHE CA HA sing N N 276
PHE C O doub N N 277
PHE C OXT sing N N 278
PHE CB CG sing N N 279
PHE CB HB2 sing N N 280
PHE CB HB3 sing N N 281
PHE CG CD1 doub Y N 282
PHE CG CD2 sing Y N 283
PHE CD1 CE1 sing Y N 284
PHE CD1 HD1 sing N N 285
PHE CD2 CE2 doub Y N 286
PHE CD2 HD2 sing N N 287
PHE CE1 CZ doub Y N 288
PHE CE1 HE1 sing N N 289
PHE CE2 CZ sing Y N 290
PHE CE2 HE2 sing N N 291
PHE CZ HZ sing N N 292
PHE OXT HXT sing N N 293
PRO N CA sing N N 294
PRO N CD sing N N 295
PRO N H sing N N 296
PRO CA C sing N N 297
PRO CA CB sing N N 298
PRO CA HA sing N N 299
PRO C O doub N N 300
PRO C OXT sing N N 301
PRO CB CG sing N N 302
PRO CB HB2 sing N N 303
PRO CB HB3 sing N N 304
PRO CG CD sing N N 305
PRO CG HG2 sing N N 306
PRO CG HG3 sing N N 307
PRO CD HD2 sing N N 308
PRO CD HD3 sing N N 309
PRO OXT HXT sing N N 310
SER N CA sing N N 311
SER N H sing N N 312
SER N H2 sing N N 313
SER CA C sing N N 314
SER CA CB sing N N 315
SER CA HA sing N N 316
SER C O doub N N 317
SER C OXT sing N N 318
SER CB OG sing N N 319
SER CB HB2 sing N N 320
SER CB HB3 sing N N 321
SER OG HG sing N N 322
SER OXT HXT sing N N 323
THR N CA sing N N 324
THR N H sing N N 325
THR N H2 sing N N 326
THR CA C sing N N 327
THR CA CB sing N N 328
THR CA HA sing N N 329
THR C O doub N N 330
THR C OXT sing N N 331
THR CB OG1 sing N N 332
THR CB CG2 sing N N 333
THR CB HB sing N N 334
THR OG1 HG1 sing N N 335
THR CG2 HG21 sing N N 336
THR CG2 HG22 sing N N 337
THR CG2 HG23 sing N N 338
THR OXT HXT sing N N 339
TRP N CA sing N N 340
TRP N H sing N N 341
TRP N H2 sing N N 342
TRP CA C sing N N 343
TRP CA CB sing N N 344
TRP CA HA sing N N 345
TRP C O doub N N 346
TRP C OXT sing N N 347
TRP CB CG sing N N 348
TRP CB HB2 sing N N 349
TRP CB HB3 sing N N 350
TRP CG CD1 doub Y N 351
TRP CG CD2 sing Y N 352
TRP CD1 NE1 sing Y N 353
TRP CD1 HD1 sing N N 354
TRP CD2 CE2 doub Y N 355
TRP CD2 CE3 sing Y N 356
TRP NE1 CE2 sing Y N 357
TRP NE1 HE1 sing N N 358
TRP CE2 CZ2 sing Y N 359
TRP CE3 CZ3 doub Y N 360
TRP CE3 HE3 sing N N 361
TRP CZ2 CH2 doub Y N 362
TRP CZ2 HZ2 sing N N 363
TRP CZ3 CH2 sing Y N 364
TRP CZ3 HZ3 sing N N 365
TRP CH2 HH2 sing N N 366
TRP OXT HXT sing N N 367
TYR N CA sing N N 368
TYR N H sing N N 369
TYR N H2 sing N N 370
TYR CA C sing N N 371
TYR CA CB sing N N 372
TYR CA HA sing N N 373
TYR C O doub N N 374
TYR C OXT sing N N 375
TYR CB CG sing N N 376
TYR CB HB2 sing N N 377
TYR CB HB3 sing N N 378
TYR CG CD1 doub Y N 379
TYR CG CD2 sing Y N 380
TYR CD1 CE1 sing Y N 381
TYR CD1 HD1 sing N N 382
TYR CD2 CE2 doub Y N 383
TYR CD2 HD2 sing N N 384
TYR CE1 CZ doub Y N 385
TYR CE1 HE1 sing N N 386
TYR CE2 CZ sing Y N 387
TYR CE2 HE2 sing N N 388
TYR CZ OH sing N N 389
TYR OH HH sing N N 390
TYR OXT HXT sing N N 391
VAL N CA sing N N 392
VAL N H sing N N 393
VAL N H2 sing N N 394
VAL CA C sing N N 395
VAL CA CB sing N N 396
VAL CA HA sing N N 397
VAL C O doub N N 398
VAL C OXT sing N N 399
VAL CB CG1 sing N N 400
VAL CB CG2 sing N N 401
VAL CB HB sing N N 402
VAL CG1 HG11 sing N N 403
VAL CG1 HG12 sing N N 404
VAL CG1 HG13 sing N N 405
VAL CG2 HG21 sing N N 406
VAL CG2 HG22 sing N N 407
VAL CG2 HG23 sing N N 408
VAL OXT HXT sing N N 409
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1HUY
_pdbx_initial_refinement_model.details 'PDB ENTRY 1HUY WITH RESIDUE 80 MUTATED TO GLUTAMINE'
#
_atom_sites.entry_id 3DQD
_atom_sites.fract_transf_matrix[1][1] 0.019534
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.015879
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.014059
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_