HEADER UNKNOWN FUNCTION 11-JUL-08 3DRZ TITLE X-RAY CRYSTAL STRUCTURE OF THE N-TERMINAL BTB DOMAIN OF HUMAN KCTD5 TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD5; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, UNP RESIDUES 40-145; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KCTD5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28A; SOURCE 10 OTHER_DETAILS: MODIFIED VECTOR, TEV PROTEASE CLEAVAGE SITE REPLACING SOURCE 11 THROMBIN SITE KEYWDS KCTD5, BTB/POZ, POTASSIUM CHANNEL DOMAIN T1, PENTAMER, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR V.TERESHKO,I.DEMENTIEVA,S.A.N.GOLDSTEIN REVDAT 4 30-AUG-23 3DRZ 1 SEQADV REVDAT 3 13-JUL-11 3DRZ 1 VERSN REVDAT 2 05-MAY-09 3DRZ 1 JRNL REVDAT 1 17-FEB-09 3DRZ 0 JRNL AUTH I.S.DEMENTIEVA,V.TERESHKO,Z.A.MCCROSSAN,E.SOLOMAHA,D.ARAKI, JRNL AUTH 2 C.XU,N.GRIGORIEFF,S.A.GOLDSTEIN JRNL TITL PENTAMERIC ASSEMBLY OF POTASSIUM CHANNEL TETRAMERIZATION JRNL TITL 2 DOMAIN-CONTAINING PROTEIN 5. JRNL REF J.MOL.BIOL. V. 387 175 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19361449 JRNL DOI 10.1016/J.JMB.2009.01.030 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 44550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2374 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3090 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 202 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4066 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 359 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46000 REMARK 3 B22 (A**2) : -2.62000 REMARK 3 B33 (A**2) : 3.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.421 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4176 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5644 ; 1.196 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 496 ; 4.672 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;28.715 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 771 ;13.856 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;21.825 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 626 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3132 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2464 ; 0.938 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3992 ; 1.677 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1712 ; 2.396 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1647 ; 3.814 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 95 REMARK 3 RESIDUE RANGE : A 96 A 145 REMARK 3 RESIDUE RANGE : A 1001 A 1074 REMARK 3 ORIGIN FOR THE GROUP (A): -14.2065 -10.4971 18.5026 REMARK 3 T TENSOR REMARK 3 T11: -0.0401 T22: -0.0425 REMARK 3 T33: -0.0148 T12: -0.0456 REMARK 3 T13: 0.0192 T23: 0.0563 REMARK 3 L TENSOR REMARK 3 L11: 1.7121 L22: 2.5660 REMARK 3 L33: 2.1987 L12: -0.8625 REMARK 3 L13: 0.4768 L23: -0.3026 REMARK 3 S TENSOR REMARK 3 S11: -0.0093 S12: -0.2490 S13: -0.1785 REMARK 3 S21: 0.2632 S22: -0.0264 S23: 0.3710 REMARK 3 S31: 0.1995 S32: -0.1113 S33: 0.0358 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 43 B 95 REMARK 3 RESIDUE RANGE : B 96 B 145 REMARK 3 RESIDUE RANGE : B 1000 B 1089 REMARK 3 ORIGIN FOR THE GROUP (A): -14.3966 7.3347 5.9032 REMARK 3 T TENSOR REMARK 3 T11: -0.0699 T22: -0.0518 REMARK 3 T33: -0.0512 T12: 0.0164 REMARK 3 T13: -0.0265 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 1.6374 L22: 2.1979 REMARK 3 L33: 1.7467 L12: -0.0956 REMARK 3 L13: -0.1152 L23: 0.2224 REMARK 3 S TENSOR REMARK 3 S11: 0.0285 S12: 0.0864 S13: 0.0770 REMARK 3 S21: -0.0855 S22: 0.0034 S23: 0.0974 REMARK 3 S31: -0.0490 S32: -0.1260 S33: -0.0318 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 44 C 95 REMARK 3 RESIDUE RANGE : C 96 C 145 REMARK 3 RESIDUE RANGE : C 1008 C 1085 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4510 10.9891 0.3067 REMARK 3 T TENSOR REMARK 3 T11: -0.0228 T22: -0.0493 REMARK 3 T33: -0.0745 T12: -0.0187 REMARK 3 T13: 0.0153 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 2.1975 L22: 2.2525 REMARK 3 L33: 1.2097 L12: 0.0155 REMARK 3 L13: -0.1435 L23: 0.2279 REMARK 3 S TENSOR REMARK 3 S11: 0.0665 S12: 0.1041 S13: 0.1074 REMARK 3 S21: -0.1690 S22: 0.0194 S23: -0.0652 REMARK 3 S31: -0.1090 S32: 0.1124 S33: -0.0859 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 43 D 95 REMARK 3 RESIDUE RANGE : D 96 D 145 REMARK 3 RESIDUE RANGE : D 1009 D 1078 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8062 -3.7539 9.6490 REMARK 3 T TENSOR REMARK 3 T11: -0.0494 T22: -0.0411 REMARK 3 T33: -0.0290 T12: -0.0100 REMARK 3 T13: -0.0176 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.3194 L22: 1.5414 REMARK 3 L33: 2.1643 L12: 0.1766 REMARK 3 L13: 0.5801 L23: -0.5813 REMARK 3 S TENSOR REMARK 3 S11: 0.1291 S12: -0.1981 S13: -0.2865 REMARK 3 S21: 0.0726 S22: -0.0016 S23: -0.1425 REMARK 3 S31: 0.1917 S32: 0.0679 S33: -0.1275 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 43 E 95 REMARK 3 RESIDUE RANGE : E 96 E 145 REMARK 3 RESIDUE RANGE : E 1001 E 1095 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9812 -17.0818 21.3861 REMARK 3 T TENSOR REMARK 3 T11: -0.0553 T22: 0.0139 REMARK 3 T33: -0.1423 T12: 0.0508 REMARK 3 T13: -0.0293 T23: 0.1417 REMARK 3 L TENSOR REMARK 3 L11: 3.6367 L22: 2.0812 REMARK 3 L33: 2.2613 L12: 0.0446 REMARK 3 L13: 0.4015 L23: 0.3682 REMARK 3 S TENSOR REMARK 3 S11: 0.0616 S12: 0.1898 S13: -0.0499 REMARK 3 S21: 0.1175 S22: -0.1228 S23: -0.1812 REMARK 3 S31: 0.0758 S32: 0.2849 S33: 0.0612 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3DRZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048413. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI (111) REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS K-B REMARK 200 GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46924 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.41200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3DRX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% (W/V) PEG 3350, 100 MM MGCL2, 100 REMARK 280 M HEPES, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.51950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.07900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.35900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.07900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.51950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.35900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 39 REMARK 465 GLY A 40 REMARK 465 SER A 41 REMARK 465 VAL A 42 REMARK 465 SER B 39 REMARK 465 GLY B 40 REMARK 465 SER B 41 REMARK 465 VAL B 42 REMARK 465 SER C 39 REMARK 465 GLY C 40 REMARK 465 SER C 41 REMARK 465 VAL C 42 REMARK 465 SER C 43 REMARK 465 ALA C 76 REMARK 465 ASP C 77 REMARK 465 PRO C 78 REMARK 465 ASP C 79 REMARK 465 LEU C 80 REMARK 465 ASP C 81 REMARK 465 SER D 39 REMARK 465 GLY D 40 REMARK 465 SER D 41 REMARK 465 VAL D 42 REMARK 465 GLN D 75 REMARK 465 ALA D 76 REMARK 465 ASP D 77 REMARK 465 PRO D 78 REMARK 465 ASP D 79 REMARK 465 LEU D 80 REMARK 465 ASP D 81 REMARK 465 SER D 82 REMARK 465 SER E 39 REMARK 465 GLY E 40 REMARK 465 SER E 41 REMARK 465 VAL E 42 REMARK 465 GLN E 75 REMARK 465 ALA E 76 REMARK 465 ASP E 77 REMARK 465 PRO E 78 REMARK 465 ASP E 79 REMARK 465 LEU E 80 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 66 -6.28 -59.62 REMARK 500 ASP A 79 37.54 -78.61 REMARK 500 ASP B 83 51.19 -95.33 REMARK 500 ARG D 72 8.35 -59.73 REMARK 500 LEU D 73 57.19 -150.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DRX RELATED DB: PDB REMARK 900 KCTD5 PROTEIN CRYSTALLIZED IN HIGH-SALT BUFFER REMARK 900 RELATED ID: 3DRY RELATED DB: PDB REMARK 900 KCTD5 PROTEIN CRYSTALLIZED IN LOW-SALT BUFFER DBREF 3DRZ A 40 145 UNP Q9NXV2 KCTD5_HUMAN 40 145 DBREF 3DRZ B 40 145 UNP Q9NXV2 KCTD5_HUMAN 40 145 DBREF 3DRZ C 40 145 UNP Q9NXV2 KCTD5_HUMAN 40 145 DBREF 3DRZ D 40 145 UNP Q9NXV2 KCTD5_HUMAN 40 145 DBREF 3DRZ E 40 145 UNP Q9NXV2 KCTD5_HUMAN 40 145 SEQADV 3DRZ SER A 39 UNP Q9NXV2 EXPRESSION TAG SEQADV 3DRZ SER B 39 UNP Q9NXV2 EXPRESSION TAG SEQADV 3DRZ SER C 39 UNP Q9NXV2 EXPRESSION TAG SEQADV 3DRZ SER D 39 UNP Q9NXV2 EXPRESSION TAG SEQADV 3DRZ SER E 39 UNP Q9NXV2 EXPRESSION TAG SEQRES 1 A 107 SER GLY SER VAL SER LYS TRP VAL ARG LEU ASN VAL GLY SEQRES 2 A 107 GLY THR TYR PHE LEU THR THR ARG GLN THR LEU CYS ARG SEQRES 3 A 107 ASP PRO LYS SER PHE LEU TYR ARG LEU CYS GLN ALA ASP SEQRES 4 A 107 PRO ASP LEU ASP SER ASP LYS ASP GLU THR GLY ALA TYR SEQRES 5 A 107 LEU ILE ASP ARG ASP PRO THR TYR PHE GLY PRO VAL LEU SEQRES 6 A 107 ASN TYR LEU ARG HIS GLY LYS LEU VAL ILE ASN LYS ASP SEQRES 7 A 107 LEU ALA GLU GLU GLY VAL LEU GLU GLU ALA GLU PHE TYR SEQRES 8 A 107 ASN ILE THR SER LEU ILE LYS LEU VAL LYS ASP LYS ILE SEQRES 9 A 107 ARG GLU ARG SEQRES 1 B 107 SER GLY SER VAL SER LYS TRP VAL ARG LEU ASN VAL GLY SEQRES 2 B 107 GLY THR TYR PHE LEU THR THR ARG GLN THR LEU CYS ARG SEQRES 3 B 107 ASP PRO LYS SER PHE LEU TYR ARG LEU CYS GLN ALA ASP SEQRES 4 B 107 PRO ASP LEU ASP SER ASP LYS ASP GLU THR GLY ALA TYR SEQRES 5 B 107 LEU ILE ASP ARG ASP PRO THR TYR PHE GLY PRO VAL LEU SEQRES 6 B 107 ASN TYR LEU ARG HIS GLY LYS LEU VAL ILE ASN LYS ASP SEQRES 7 B 107 LEU ALA GLU GLU GLY VAL LEU GLU GLU ALA GLU PHE TYR SEQRES 8 B 107 ASN ILE THR SER LEU ILE LYS LEU VAL LYS ASP LYS ILE SEQRES 9 B 107 ARG GLU ARG SEQRES 1 C 107 SER GLY SER VAL SER LYS TRP VAL ARG LEU ASN VAL GLY SEQRES 2 C 107 GLY THR TYR PHE LEU THR THR ARG GLN THR LEU CYS ARG SEQRES 3 C 107 ASP PRO LYS SER PHE LEU TYR ARG LEU CYS GLN ALA ASP SEQRES 4 C 107 PRO ASP LEU ASP SER ASP LYS ASP GLU THR GLY ALA TYR SEQRES 5 C 107 LEU ILE ASP ARG ASP PRO THR TYR PHE GLY PRO VAL LEU SEQRES 6 C 107 ASN TYR LEU ARG HIS GLY LYS LEU VAL ILE ASN LYS ASP SEQRES 7 C 107 LEU ALA GLU GLU GLY VAL LEU GLU GLU ALA GLU PHE TYR SEQRES 8 C 107 ASN ILE THR SER LEU ILE LYS LEU VAL LYS ASP LYS ILE SEQRES 9 C 107 ARG GLU ARG SEQRES 1 D 107 SER GLY SER VAL SER LYS TRP VAL ARG LEU ASN VAL GLY SEQRES 2 D 107 GLY THR TYR PHE LEU THR THR ARG GLN THR LEU CYS ARG SEQRES 3 D 107 ASP PRO LYS SER PHE LEU TYR ARG LEU CYS GLN ALA ASP SEQRES 4 D 107 PRO ASP LEU ASP SER ASP LYS ASP GLU THR GLY ALA TYR SEQRES 5 D 107 LEU ILE ASP ARG ASP PRO THR TYR PHE GLY PRO VAL LEU SEQRES 6 D 107 ASN TYR LEU ARG HIS GLY LYS LEU VAL ILE ASN LYS ASP SEQRES 7 D 107 LEU ALA GLU GLU GLY VAL LEU GLU GLU ALA GLU PHE TYR SEQRES 8 D 107 ASN ILE THR SER LEU ILE LYS LEU VAL LYS ASP LYS ILE SEQRES 9 D 107 ARG GLU ARG SEQRES 1 E 107 SER GLY SER VAL SER LYS TRP VAL ARG LEU ASN VAL GLY SEQRES 2 E 107 GLY THR TYR PHE LEU THR THR ARG GLN THR LEU CYS ARG SEQRES 3 E 107 ASP PRO LYS SER PHE LEU TYR ARG LEU CYS GLN ALA ASP SEQRES 4 E 107 PRO ASP LEU ASP SER ASP LYS ASP GLU THR GLY ALA TYR SEQRES 5 E 107 LEU ILE ASP ARG ASP PRO THR TYR PHE GLY PRO VAL LEU SEQRES 6 E 107 ASN TYR LEU ARG HIS GLY LYS LEU VAL ILE ASN LYS ASP SEQRES 7 E 107 LEU ALA GLU GLU GLY VAL LEU GLU GLU ALA GLU PHE TYR SEQRES 8 E 107 ASN ILE THR SER LEU ILE LYS LEU VAL LYS ASP LYS ILE SEQRES 9 E 107 ARG GLU ARG FORMUL 6 HOH *359(H2 O) HELIX 1 1 ARG A 59 CYS A 63 1 5 HELIX 2 2 SER A 68 GLN A 75 1 8 HELIX 3 3 ASP A 77 LYS A 84 5 8 HELIX 4 4 ASP A 95 GLY A 109 1 15 HELIX 5 5 ALA A 118 ASN A 130 1 13 HELIX 6 6 ILE A 131 ARG A 145 1 15 HELIX 7 7 ARG B 59 CYS B 63 1 5 HELIX 8 8 PHE B 69 GLN B 75 1 7 HELIX 9 9 ASP B 77 ASP B 81 5 5 HELIX 10 10 ASP B 95 GLY B 109 1 15 HELIX 11 11 ALA B 118 ASN B 130 1 13 HELIX 12 12 ILE B 131 ARG B 145 1 15 HELIX 13 13 ARG C 59 CYS C 63 1 5 HELIX 14 14 SER C 68 CYS C 74 5 7 HELIX 15 15 ASP C 95 GLY C 109 1 15 HELIX 16 16 ALA C 118 TYR C 129 1 12 HELIX 17 17 ILE C 131 GLU C 144 1 14 HELIX 18 18 ARG D 59 CYS D 63 1 5 HELIX 19 19 LEU D 70 CYS D 74 5 5 HELIX 20 20 ASP D 95 THR D 97 5 3 HELIX 21 21 TYR D 98 GLY D 109 1 12 HELIX 22 22 ALA D 118 TYR D 129 1 12 HELIX 23 23 ILE D 131 GLU D 144 1 14 HELIX 24 24 ARG E 59 CYS E 63 1 5 HELIX 25 25 SER E 68 CYS E 74 5 7 HELIX 26 26 ASP E 95 GLY E 109 1 15 HELIX 27 27 ALA E 118 ASN E 130 1 13 HELIX 28 28 ILE E 131 ARG E 145 1 15 SHEET 1 A 3 THR A 53 THR A 58 0 SHEET 2 A 3 TRP A 45 VAL A 50 -1 N VAL A 46 O THR A 57 SHEET 3 A 3 TYR A 90 ILE A 92 1 O TYR A 90 N ASN A 49 SHEET 1 B 3 THR B 53 THR B 58 0 SHEET 2 B 3 TRP B 45 VAL B 50 -1 N LEU B 48 O PHE B 55 SHEET 3 B 3 TYR B 90 ILE B 92 1 O TYR B 90 N ASN B 49 SHEET 1 C 3 THR C 53 THR C 58 0 SHEET 2 C 3 TRP C 45 VAL C 50 -1 N VAL C 46 O THR C 57 SHEET 3 C 3 TYR C 90 ILE C 92 1 O TYR C 90 N ASN C 49 SHEET 1 D 3 THR D 53 THR D 58 0 SHEET 2 D 3 TRP D 45 VAL D 50 -1 N VAL D 46 O THR D 57 SHEET 3 D 3 TYR D 90 ILE D 92 1 O TYR D 90 N ASN D 49 SHEET 1 E 3 THR E 53 THR E 58 0 SHEET 2 E 3 TRP E 45 VAL E 50 -1 N VAL E 46 O THR E 57 SHEET 3 E 3 TYR E 90 ILE E 92 1 O TYR E 90 N ASN E 49 SSBOND 1 CYS A 63 CYS A 74 1555 1555 2.05 SSBOND 2 CYS B 63 CYS B 74 1555 1555 2.02 SSBOND 3 CYS C 63 CYS C 74 1555 1555 2.04 SSBOND 4 CYS D 63 CYS D 74 1555 1555 2.04 SSBOND 5 CYS E 63 CYS E 74 1555 1555 2.02 CRYST1 59.039 90.718 110.158 90.00 90.00 90.00 P 21 21 21 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016938 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011023 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009078 0.00000