HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 11-JUL-08 3DS8 TITLE THE CRYSTAL STRUCTURE OF THE GENE LIN2722 PRODUCTS FROM LISTERIA TITLE 2 INNOCUA COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIN2722 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; SOURCE 3 ORGANISM_TAXID: 1642; SOURCE 4 STRAIN: CLIP11262; SOURCE 5 GENE: LIN2722; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS UNKONWN FUNCTION, LIN2722, STRUCTURAL GENOMICS, PSI, MCSG, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,R.WU,L.FREEMAN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 6 06-NOV-24 3DS8 1 REMARK REVDAT 5 22-JUN-22 3DS8 1 TITLE REMARK LINK REVDAT 4 25-OCT-17 3DS8 1 REMARK REVDAT 3 13-JUL-11 3DS8 1 VERSN REVDAT 2 24-FEB-09 3DS8 1 VERSN REVDAT 1 16-SEP-08 3DS8 0 JRNL AUTH R.ZHANG,R.WU,L.FREEMAN,A.JOACHIMIAK JRNL TITL THE CRYSATL STRUCTURE OF THE GENE LIN2722 PRODUCTS FROM JRNL TITL 2 LISTERIA INNOCUA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 29792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1591 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2057 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 106 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1982 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 321 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 15.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.532 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2057 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1372 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2789 ; 1.656 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3382 ; 1.008 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 6.056 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;37.294 ;26.022 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ;12.282 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;19.504 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2264 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 374 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 441 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1481 ; 0.200 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1005 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 997 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 285 ; 0.205 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.326 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 36 ; 0.298 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 24 ; 0.299 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1534 ; 1.721 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 512 ; 0.317 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2046 ; 1.693 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 904 ; 3.558 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 743 ; 4.769 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 50 REMARK 3 RESIDUE RANGE : A 51 A 100 REMARK 3 RESIDUE RANGE : A 101 A 150 REMARK 3 RESIDUE RANGE : A 151 A 200 REMARK 3 RESIDUE RANGE : A 201 A 254 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4573 2.6299 55.6975 REMARK 3 T TENSOR REMARK 3 T11: -0.0296 T22: -0.0524 REMARK 3 T33: -0.0380 T12: -0.0053 REMARK 3 T13: -0.0111 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.7002 L22: 0.9344 REMARK 3 L33: 0.9524 L12: -0.1230 REMARK 3 L13: 0.2140 L23: 0.0704 REMARK 3 S TENSOR REMARK 3 S11: -0.0297 S12: 0.0183 S13: 0.0053 REMARK 3 S21: 0.0184 S22: 0.0090 S23: -0.0261 REMARK 3 S31: -0.0394 S32: 0.0694 S33: 0.0207 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DS8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048422. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29792 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 49.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 17.00 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% GLYCEROL, 20.5% PEK4000, 0.065M REMARK 280 TRIS_NA CITRATE, 0.1M NH4 ACETATE, PH 5.6, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.53750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.60550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.60550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 122.30625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.60550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.60550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.76875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.60550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.60550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 122.30625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.60550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.60550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.76875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.53750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE PROTEIN DOES NOT COMPLEXATE IN REMARK 300 SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 183 OE1 GLU A 183 8555 1.99 REMARK 500 OD1 ASP A 86 OH TYR A 253 4555 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 213 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 102 -116.24 53.89 REMARK 500 ARG A 125 -71.20 -104.44 REMARK 500 ASP A 136 -154.13 57.66 REMARK 500 PHE A 202 -19.24 -143.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 259 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC60765.2 RELATED DB: TARGETDB DBREF 3DS8 A 1 254 UNP Q927R6 Q927R6_LISIN 38 291 SEQRES 1 A 254 LYS ASP GLN ILE PRO ILE ILE LEU ILE HIS GLY SER GLY SEQRES 2 A 254 GLY ASN ALA SER SER LEU ASP LYS MSE ALA ASP GLN LEU SEQRES 3 A 254 MSE ASN GLU TYR ARG SER SER ASN GLU ALA LEU THR MSE SEQRES 4 A 254 THR VAL ASN SER GLU GLY LYS ILE LYS PHE GLU GLY LYS SEQRES 5 A 254 LEU THR LYS ASP ALA LYS ARG PRO ILE ILE LYS PHE GLY SEQRES 6 A 254 PHE GLU GLN ASN GLN ALA THR PRO ASP ASP TRP SER LYS SEQRES 7 A 254 TRP LEU LYS ILE ALA MSE GLU ASP LEU LYS SER ARG TYR SEQRES 8 A 254 GLY PHE THR GLN MSE ASP GLY VAL GLY HIS SER ASN GLY SEQRES 9 A 254 GLY LEU ALA LEU THR TYR TYR ALA GLU ASP TYR ALA GLY SEQRES 10 A 254 ASP LYS THR VAL PRO THR LEU ARG LYS LEU VAL ALA ILE SEQRES 11 A 254 GLY SER PRO PHE ASN ASP LEU ASP PRO ASN ASP ASN GLY SEQRES 12 A 254 MSE ASP LEU SER PHE LYS LYS LEU PRO ASN SER THR PRO SEQRES 13 A 254 GLN MSE ASP TYR PHE ILE LYS ASN GLN THR GLU VAL SER SEQRES 14 A 254 PRO ASP LEU GLU VAL LEU ALA ILE ALA GLY GLU LEU SER SEQRES 15 A 254 GLU ASP ASN PRO THR ASP GLY ILE VAL PRO THR ILE SER SEQRES 16 A 254 SER LEU ALA THR ARG LEU PHE MSE PRO GLY SER ALA LYS SEQRES 17 A 254 ALA TYR ILE GLU ASP ILE GLN VAL GLY GLU ASP ALA VAL SEQRES 18 A 254 HIS GLN THR LEU HIS GLU THR PRO LYS SER ILE GLU LYS SEQRES 19 A 254 THR TYR TRP PHE LEU GLU LYS PHE LYS THR ASP GLU THR SEQRES 20 A 254 VAL ILE GLN LEU ASP TYR LYS MODRES 3DS8 MSE A 22 MET SELENOMETHIONINE MODRES 3DS8 MSE A 27 MET SELENOMETHIONINE MODRES 3DS8 MSE A 39 MET SELENOMETHIONINE MODRES 3DS8 MSE A 84 MET SELENOMETHIONINE MODRES 3DS8 MSE A 96 MET SELENOMETHIONINE MODRES 3DS8 MSE A 144 MET SELENOMETHIONINE MODRES 3DS8 MSE A 158 MET SELENOMETHIONINE MODRES 3DS8 MSE A 203 MET SELENOMETHIONINE HET MSE A 22 8 HET MSE A 27 8 HET MSE A 39 8 HET MSE A 84 8 HET MSE A 96 8 HET MSE A 144 8 HET MSE A 158 8 HET MSE A 203 8 HET SO4 A 255 5 HET SO4 A 256 5 HET SO4 A 257 5 HET SO4 A 258 5 HET SO4 A 259 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 HOH *321(H2 O) HELIX 1 1 LEU A 19 GLU A 29 1 11 HELIX 2 2 THR A 72 GLY A 92 1 21 HELIX 3 3 SER A 102 TYR A 115 1 14 HELIX 4 4 ASP A 138 GLY A 143 1 6 HELIX 5 5 THR A 155 ASN A 164 1 10 HELIX 6 6 GLN A 165 VAL A 168 5 4 HELIX 7 7 PRO A 192 LEU A 197 1 6 HELIX 8 8 ALA A 198 PHE A 202 5 5 HELIX 9 9 GLU A 218 GLU A 227 5 10 HELIX 10 10 THR A 228 LYS A 241 1 14 SHEET 1 A 9 LYS A 46 GLU A 50 0 SHEET 2 A 9 ALA A 36 ASN A 42 -1 N THR A 38 O GLU A 50 SHEET 3 A 9 ILE A 61 PHE A 66 1 O LYS A 63 N LEU A 37 SHEET 4 A 9 ILE A 6 ILE A 9 1 N LEU A 8 O ILE A 62 SHEET 5 A 9 GLN A 95 HIS A 101 1 O ASP A 97 N ILE A 7 SHEET 6 A 9 THR A 123 ILE A 130 1 O VAL A 128 N GLY A 100 SHEET 7 A 9 GLU A 173 GLU A 180 1 O GLU A 173 N LEU A 127 SHEET 8 A 9 ALA A 209 VAL A 216 1 O GLN A 215 N ALA A 178 SHEET 9 A 9 VAL A 248 GLN A 250 1 O GLN A 250 N TYR A 210 LINK C LYS A 21 N MSE A 22 1555 1555 1.32 LINK C MSE A 22 N ALA A 23 1555 1555 1.33 LINK C LEU A 26 N MSE A 27 1555 1555 1.35 LINK C MSE A 27 N ASN A 28 1555 1555 1.33 LINK C THR A 38 N MSE A 39 1555 1555 1.33 LINK C MSE A 39 N THR A 40 1555 1555 1.33 LINK C ALA A 83 N MSE A 84 1555 1555 1.32 LINK C MSE A 84 N GLU A 85 1555 1555 1.34 LINK C GLN A 95 N MSE A 96 1555 1555 1.34 LINK C MSE A 96 N ASP A 97 1555 1555 1.31 LINK C GLY A 143 N MSE A 144 1555 1555 1.34 LINK C MSE A 144 N ASP A 145 1555 1555 1.33 LINK C GLN A 157 N MSE A 158 1555 1555 1.34 LINK C MSE A 158 N ASP A 159 1555 1555 1.34 LINK C PHE A 202 N MSE A 203 1555 1555 1.34 LINK C MSE A 203 N PRO A 204 1555 1555 1.34 CISPEP 1 TYR A 253 LYS A 254 0 -3.00 CISPEP 2 TYR A 253 LYS A 254 0 -23.79 SITE 1 AC1 9 GLY A 11 SER A 12 ASN A 28 ARG A 31 SITE 2 AC1 9 SER A 102 ASN A 103 HIS A 222 HOH A 318 SITE 3 AC1 9 HOH A 426 SITE 1 AC2 10 GLY A 11 SER A 12 GLY A 14 SER A 18 SITE 2 AC2 10 HIS A 101 GLN A 223 HIS A 226 HOH A 307 SITE 3 AC2 10 HOH A 371 HOH A 537 SITE 1 AC3 3 ASN A 34 LYS A 58 HOH A 365 SITE 1 AC4 7 ARG A 31 ILE A 190 GLN A 223 HOH A 328 SITE 2 AC4 7 HOH A 359 HOH A 365 HOH A 405 SITE 1 AC5 8 ARG A 125 LYS A 126 GLU A 173 PHE A 242 SITE 2 AC5 8 LYS A 243 THR A 244 HOH A 275 HOH A 546 CRYST1 63.211 63.211 163.075 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015820 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015820 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006132 0.00000