HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 14-JUL-08 3DT5 TITLE C_TERMINAL DOMAIN OF PROTEIN OF UNKNOWN FUNCTION AF_0924 FROM TITLE 2 ARCHAEOGLOBUS FULGIDUS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN AF_0924; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: AF_0924; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B MODIFIED KEYWDS STRUCTURAL GENOMICS, APC7732, UNKNOWN FUNCTION, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 MEMBRANE, TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,E.EVDOKIMOVA,M.KUDRITSKA,A.SAVCHENKO,A.M.EDWARDS, AUTHOR 2 A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 25-OCT-17 3DT5 1 REMARK REVDAT 3 13-JUL-11 3DT5 1 VERSN REVDAT 2 24-FEB-09 3DT5 1 VERSN REVDAT 1 29-JUL-08 3DT5 0 JRNL AUTH J.OSIPIUK,E.EVDOKIMOVA,M.KUDRITSKA,A.SAVCHENKO,A.M.EDWARDS, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF C_TERMINAL DOMAIN OF PROTEIN OF JRNL TITL 2 UNKNOWN FUNCTION AF_0924 FROM ARCHAEOGLOBUS FULGIDUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 626 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 888 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1003 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 46.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.37000 REMARK 3 B22 (A**2) : -0.37000 REMARK 3 B33 (A**2) : 0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.352 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1080 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1469 ; 1.631 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 132 ; 5.372 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 55 ;29.592 ;24.182 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 201 ;17.244 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;21.669 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 156 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 821 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 466 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 744 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 73 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.079 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.223 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.078 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.193 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 636 ; 1.055 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1002 ; 1.719 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 525 ; 2.654 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 460 ; 4.210 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 77 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): 29.9447 17.7368 12.9412 REMARK 3 T TENSOR REMARK 3 T11: -0.0319 T22: 0.0533 REMARK 3 T33: 0.1562 T12: 0.0136 REMARK 3 T13: -0.0710 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 6.5778 L22: 29.7750 REMARK 3 L33: 13.0781 L12: 10.5485 REMARK 3 L13: -0.4238 L23: -1.8641 REMARK 3 S TENSOR REMARK 3 S11: -0.0646 S12: 0.0505 S13: -0.6663 REMARK 3 S21: 0.4176 S22: -0.0185 S23: -3.1862 REMARK 3 S31: 1.1081 S32: 1.1544 S33: 0.0831 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 88 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 20.1522 31.3033 15.7684 REMARK 3 T TENSOR REMARK 3 T11: -0.0539 T22: -0.1115 REMARK 3 T33: -0.0718 T12: -0.0043 REMARK 3 T13: -0.0385 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.6030 L22: 6.3126 REMARK 3 L33: 0.1311 L12: -1.8104 REMARK 3 L13: -0.1635 L23: 0.2153 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: 0.0443 S13: 0.0437 REMARK 3 S21: 0.3640 S22: 0.0680 S23: -0.3234 REMARK 3 S31: 0.0491 S32: -0.0028 S33: -0.0700 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 110 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5517 36.8174 7.2711 REMARK 3 T TENSOR REMARK 3 T11: -0.0904 T22: -0.1261 REMARK 3 T33: -0.0595 T12: -0.0096 REMARK 3 T13: 0.0090 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.8495 L22: 9.2471 REMARK 3 L33: 4.6235 L12: -2.7999 REMARK 3 L13: -1.5361 L23: 5.2489 REMARK 3 S TENSOR REMARK 3 S11: -0.0280 S12: 0.0033 S13: -0.0039 REMARK 3 S21: -0.1168 S22: 0.1061 S23: -0.4298 REMARK 3 S31: 0.0031 S32: 0.0785 S33: -0.0782 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6973 26.7169 3.8653 REMARK 3 T TENSOR REMARK 3 T11: -0.0590 T22: -0.0885 REMARK 3 T33: -0.1027 T12: 0.0163 REMARK 3 T13: 0.0156 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.2826 L22: 5.4700 REMARK 3 L33: 0.3851 L12: 2.0604 REMARK 3 L13: 0.9709 L23: -0.0302 REMARK 3 S TENSOR REMARK 3 S11: 0.3225 S12: 0.0996 S13: 0.0217 REMARK 3 S21: -0.0673 S22: -0.1521 S23: -0.2038 REMARK 3 S31: -0.0122 S32: -0.0766 S33: -0.1704 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 118 A 123 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9210 17.4175 5.8623 REMARK 3 T TENSOR REMARK 3 T11: -0.0835 T22: -0.0814 REMARK 3 T33: -0.0721 T12: -0.0156 REMARK 3 T13: 0.0064 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.5756 L22: 5.1094 REMARK 3 L33: 0.6948 L12: 4.2653 REMARK 3 L13: -0.1973 L23: -0.1146 REMARK 3 S TENSOR REMARK 3 S11: 0.2771 S12: 0.0990 S13: 0.1643 REMARK 3 S21: 0.1057 S22: -0.0766 S23: 0.0051 REMARK 3 S31: 0.2044 S32: 0.0249 S33: -0.2004 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 124 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3689 19.8085 5.3423 REMARK 3 T TENSOR REMARK 3 T11: -0.1067 T22: -0.0968 REMARK 3 T33: -0.0516 T12: -0.0328 REMARK 3 T13: -0.0051 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 3.0982 L22: 1.1262 REMARK 3 L33: 9.7030 L12: -1.8678 REMARK 3 L13: 1.5633 L23: -0.9155 REMARK 3 S TENSOR REMARK 3 S11: 0.1722 S12: -0.0333 S13: -0.1070 REMARK 3 S21: 0.2806 S22: -0.1289 S23: 0.0988 REMARK 3 S31: 0.0922 S32: 0.0130 S33: -0.0433 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 137 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9200 35.3617 3.6346 REMARK 3 T TENSOR REMARK 3 T11: 0.0171 T22: -0.0643 REMARK 3 T33: -0.0851 T12: -0.0173 REMARK 3 T13: -0.0448 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 7.9257 L22: 14.6210 REMARK 3 L33: 1.1202 L12: -0.8270 REMARK 3 L13: 1.7190 L23: -3.4753 REMARK 3 S TENSOR REMARK 3 S11: 0.2884 S12: 0.3374 S13: -0.5637 REMARK 3 S21: -0.9045 S22: -0.2071 S23: -0.4349 REMARK 3 S31: 0.3590 S32: -0.0039 S33: -0.0812 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 138 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4712 40.8008 13.2055 REMARK 3 T TENSOR REMARK 3 T11: -0.1057 T22: -0.1111 REMARK 3 T33: -0.0594 T12: 0.0271 REMARK 3 T13: -0.0003 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 0.7238 L22: 2.4456 REMARK 3 L33: 2.3534 L12: 1.2962 REMARK 3 L13: 0.7985 L23: 1.0017 REMARK 3 S TENSOR REMARK 3 S11: -0.0629 S12: -0.0567 S13: 0.1280 REMARK 3 S21: 0.1291 S22: 0.0434 S23: 0.2208 REMARK 3 S31: 0.0621 S32: -0.0446 S33: 0.0195 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 160 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6986 29.2320 9.8484 REMARK 3 T TENSOR REMARK 3 T11: -0.1307 T22: -0.0284 REMARK 3 T33: -0.0714 T12: -0.0550 REMARK 3 T13: 0.0013 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 4.1020 L22: 11.6950 REMARK 3 L33: 0.9080 L12: -3.4790 REMARK 3 L13: 0.8533 L23: -3.2512 REMARK 3 S TENSOR REMARK 3 S11: -0.1883 S12: 0.0937 S13: -0.2994 REMARK 3 S21: -0.2587 S22: 0.3229 S23: 0.3376 REMARK 3 S31: 0.3275 S32: -0.4896 S33: -0.1346 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 161 A 168 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9094 19.7288 16.8227 REMARK 3 T TENSOR REMARK 3 T11: -0.0085 T22: -0.1296 REMARK 3 T33: -0.1060 T12: -0.0395 REMARK 3 T13: 0.0059 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.2523 L22: 2.6173 REMARK 3 L33: 3.0407 L12: 0.0168 REMARK 3 L13: -0.1346 L23: 0.8439 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: -0.0790 S13: 0.1323 REMARK 3 S21: 0.2502 S22: -0.0891 S23: 0.0411 REMARK 3 S31: 0.3595 S32: -0.2564 S33: 0.0439 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 169 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2522 12.0541 19.5328 REMARK 3 T TENSOR REMARK 3 T11: 0.0051 T22: -0.1097 REMARK 3 T33: -0.1158 T12: -0.0316 REMARK 3 T13: -0.1001 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 8.8714 L22: 6.9996 REMARK 3 L33: 1.7681 L12: 0.8013 REMARK 3 L13: -0.5306 L23: 0.0578 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: -0.3388 S13: 0.1329 REMARK 3 S21: 0.6758 S22: 0.1320 S23: -0.4057 REMARK 3 S31: -0.1164 S32: -0.0498 S33: -0.1854 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 178 A 183 REMARK 3 ORIGIN FOR THE GROUP (A): 27.1850 12.0465 27.0384 REMARK 3 T TENSOR REMARK 3 T11: 1.1173 T22: 0.9633 REMARK 3 T33: 0.5481 T12: 0.0263 REMARK 3 T13: -0.1012 T23: 0.1425 REMARK 3 L TENSOR REMARK 3 L11: 56.4949 L22: 23.2512 REMARK 3 L33: 29.8910 L12: -10.6591 REMARK 3 L13: 41.0921 L23: -7.9768 REMARK 3 S TENSOR REMARK 3 S11: -1.5257 S12: -6.5822 S13: 1.7101 REMARK 3 S21: 4.9564 S22: 2.5395 S23: -0.7901 REMARK 3 S31: 0.0610 S32: -3.1740 S33: -1.0138 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 184 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): 10.3891 29.3802 20.3273 REMARK 3 T TENSOR REMARK 3 T11: -0.0124 T22: -0.0838 REMARK 3 T33: -0.1165 T12: -0.1094 REMARK 3 T13: 0.0901 T23: -0.0523 REMARK 3 L TENSOR REMARK 3 L11: 6.2131 L22: 14.5244 REMARK 3 L33: 14.1291 L12: -0.6679 REMARK 3 L13: 2.1731 L23: -5.5048 REMARK 3 S TENSOR REMARK 3 S11: -0.2596 S12: -0.2501 S13: -0.1703 REMARK 3 S21: 0.4685 S22: 0.2155 S23: 0.5934 REMARK 3 S31: 0.1171 S32: -0.4978 S33: 0.0441 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DT5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12898 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 27.60 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 23.30 REMARK 200 R MERGE FOR SHELL (I) : 0.88100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE, RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM CHLORIDE, 25% PEG 5500 REMARK 280 MME, 0.1 M BIS-TRIS BUFFER, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.29100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.70650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.70650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.14550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.70650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.70650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.43650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.70650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.70650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 19.14550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.70650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.70650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.43650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 38.29100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT PUTATIVE BIOLOGICAL UNIT IS THE SAME AS REMARK 300 ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 318 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 63 REMARK 465 HIS A 64 REMARK 465 SER A 65 REMARK 465 ASN A 66 REMARK 465 ARG A 67 REMARK 465 GLN A 68 REMARK 465 VAL A 69 REMARK 465 GLN A 70 REMARK 465 LEU A 71 REMARK 465 MSE A 72 REMARK 465 ALA A 73 REMARK 465 ARG A 74 REMARK 465 GLN A 75 REMARK 465 GLN A 76 REMARK 465 GLY A 196 REMARK 465 SER A 197 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 88 -66.80 -126.79 REMARK 500 SER A 97 -18.40 -140.95 REMARK 500 THR A 114 -74.81 -119.73 REMARK 500 PHE A 132 -45.84 -145.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 106 OE1 REMARK 620 2 GLU A 106 OE2 51.6 REMARK 620 3 LYS A 133 O 75.6 117.9 REMARK 620 4 ALA A 136 O 112.1 84.5 88.1 REMARK 620 5 ASP A 137 OD1 125.2 79.6 159.0 81.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC7732 RELATED DB: TARGETDB DBREF 3DT5 A 65 195 UNP O29338 Y924_ARCFU 65 195 SEQADV 3DT5 GLY A 63 UNP O29338 EXPRESSION TAG SEQADV 3DT5 HIS A 64 UNP O29338 EXPRESSION TAG SEQADV 3DT5 GLY A 196 UNP O29338 EXPRESSION TAG SEQADV 3DT5 SER A 197 UNP O29338 EXPRESSION TAG SEQRES 1 A 135 GLY HIS SER ASN ARG GLN VAL GLN LEU MSE ALA ARG GLN SEQRES 2 A 135 GLN ARG LEU LYS ALA ILE GLU ASP ARG LEU GLU LYS PHE SEQRES 3 A 135 TYR ILE PRO LEU ILE LYS ALA PHE SER SER TYR VAL TYR SEQRES 4 A 135 THR ALA GLN THR GLU ASP GLU ILE GLU THR ILE ILE THR SEQRES 5 A 135 CYS ARG ARG TYR LEU ALA GLY ASN ASN LEU LEU ARG VAL SEQRES 6 A 135 LEU PRO MSE HIS PHE LYS PHE LYS ALA ASP LYS ILE ALA SEQRES 7 A 135 GLY SER ALA ASN TRP THR PHE TYR ALA LYS GLU ASP PHE SEQRES 8 A 135 GLU GLN TRP LYS GLU ALA LEU ASP VAL LEU TRP GLU GLU SEQRES 9 A 135 PHE LEU GLU VAL LEU LYS GLU TYR TYR THR LEU SER GLY SEQRES 10 A 135 THR GLU ILE SER LEU PRO GLU LYS PRO ASP TRP LEU ILE SEQRES 11 A 135 GLY TYR LYS GLY SER MODRES 3DT5 MSE A 130 MET SELENOMETHIONINE HET MSE A 130 13 HET CA A 301 1 HET EDO A 302 4 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 CA CA 2+ FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *89(H2 O) HELIX 1 1 ARG A 77 PHE A 88 1 12 HELIX 2 2 PHE A 88 SER A 98 1 11 HELIX 3 3 GLN A 104 THR A 114 1 11 HELIX 4 4 ARG A 116 ALA A 120 5 5 HELIX 5 5 GLY A 121 LEU A 128 1 8 HELIX 6 6 PHE A 132 PHE A 134 5 3 HELIX 7 7 ALA A 149 GLY A 179 1 31 SHEET 1 A 3 ALA A 136 ASP A 137 0 SHEET 2 A 3 TRP A 145 PHE A 147 -1 O THR A 146 N ASP A 137 SHEET 3 A 3 ILE A 192 GLY A 193 1 O GLY A 193 N PHE A 147 SSBOND 1 CYS A 115 CYS A 115 1555 7555 2.99 LINK C PRO A 129 N MSE A 130 1555 1555 1.33 LINK C MSE A 130 N HIS A 131 1555 1555 1.32 LINK OE1 GLU A 106 CA CA A 301 1555 1555 2.52 LINK OE2 GLU A 106 CA CA A 301 1555 1555 2.51 LINK O LYS A 133 CA CA A 301 1555 1555 2.36 LINK O ALA A 136 CA CA A 301 1555 1555 2.30 LINK OD1 ASP A 137 CA CA A 301 1555 1555 2.39 SITE 1 AC1 6 GLU A 106 LYS A 133 ALA A 136 ASP A 137 SITE 2 AC1 6 GLU A 169 GLU A 173 SITE 1 AC2 8 ARG A 84 TYR A 89 GLY A 121 ASP A 137 SITE 2 AC2 8 GLU A 166 GLU A 169 HOH A 303 HOH A 349 CRYST1 65.413 65.413 76.582 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015287 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015287 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013058 0.00000