HEADER GENE REGULATION 15-JUL-08 3DTK TITLE CRYSTAL STRUCTURE OF THE IRRE PROTEIN, A CENTRAL REGULATOR OF DNA TITLE 2 DAMAGE REPAIR IN DEINOCOCCACEAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRRE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS DESERTI; SOURCE 3 ORGANISM_TAXID: 310783; SOURCE 4 GENE: IRRE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-TEV KEYWDS IRRE, DEINOCOCCUS, RADIOTOLERANCE, GENE REGULATION, METALLOPEPTIDASE EXPDTA X-RAY DIFFRACTION AUTHOR A.VUJICIC-ZAGAR,R.DULERMO,M.LE GORREC,F.VANNIER,P.SERVANT,S.SOMMER, AUTHOR 2 A.DE GROOT,L.SERRE REVDAT 3 01-NOV-23 3DTK 1 REMARK SEQADV REVDAT 2 24-MAR-09 3DTK 1 JRNL REVDAT 1 17-FEB-09 3DTK 0 JRNL AUTH A.VUJICIC-ZAGAR,R.DULERMO,M.LE GORREC,F.VANNIER,P.SERVANT, JRNL AUTH 2 S.SOMMER,A.DE GROOT,L.SERRE JRNL TITL CRYSTAL STRUCTURE OF THE IRRE PROTEIN, A CENTRAL REGULATOR JRNL TITL 2 OF DNA DAMAGE REPAIR IN DEINOCOCCACEAE JRNL REF J.MOL.BIOL. V. 386 704 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19150362 JRNL DOI 10.1016/J.JMB.2008.12.062 REMARK 2 REMARK 2 RESOLUTION. 3.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 4581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 222 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.24 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 336 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.3680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1873 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 89.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.590 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.424 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.883 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1917 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1299 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2602 ; 0.867 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3146 ; 0.673 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ; 4.469 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;34.009 ;22.195 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 300 ;17.240 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;14.230 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 301 ; 0.048 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2150 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 392 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 571 ; 0.257 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1479 ; 0.219 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 931 ; 0.190 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 1056 ; 0.093 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 95 ; 0.197 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 4 ; 0.082 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.165 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 32 ; 0.265 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.213 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1599 ; 0.732 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 493 ; 0.058 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1975 ; 0.801 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 754 ; 0.314 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 627 ; 0.399 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DTK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048470. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4827 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.240 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3DTE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M POTASSIUM FLUORIDE, REMARK 280 PH 7.5, VAPOR DIFFUSION, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.63000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.33600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.63000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.33600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASP A 3 REMARK 465 PRO A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 PRO A 7 REMARK 465 GLN A 180 REMARK 465 GLU A 181 REMARK 465 ASP A 182 REMARK 465 GLU A 183 REMARK 465 GLY A 184 REMARK 465 GLU A 185 REMARK 465 GLY A 186 REMARK 465 GLY A 187 REMARK 465 GLY A 188 REMARK 465 ALA A 264 REMARK 465 GLY A 265 REMARK 465 ARG A 266 REMARK 465 SER A 267 REMARK 465 GLU A 268 REMARK 465 PRO A 269 REMARK 465 ASP A 270 REMARK 465 ALA A 271 REMARK 465 ASP A 272 REMARK 465 LYS A 273 REMARK 465 PRO A 274 REMARK 465 GLU A 275 REMARK 465 ALA A 276 REMARK 465 PRO A 277 REMARK 465 GLY A 278 REMARK 465 ASP A 279 REMARK 465 GLN A 280 REMARK 465 SER A 281 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 24 -72.93 -63.18 REMARK 500 ASP A 42 73.85 -63.38 REMARK 500 GLN A 53 62.14 -114.28 REMARK 500 GLU A 74 -70.17 -46.07 REMARK 500 ASP A 101 62.25 -119.07 REMARK 500 GLU A 102 -29.55 179.83 REMARK 500 GLU A 128 -72.23 -41.10 REMARK 500 ALA A 173 137.38 -171.64 REMARK 500 THR A 225 5.95 -67.15 REMARK 500 ARG A 226 45.01 39.56 REMARK 500 PRO A 228 163.35 -49.27 REMARK 500 ALA A 230 115.39 160.41 REMARK 500 SER A 233 -140.58 -165.18 REMARK 500 ARG A 238 -55.06 -24.29 REMARK 500 SER A 239 -71.30 -35.91 REMARK 500 ALA A 245 153.49 175.88 REMARK 500 GLU A 252 -129.61 -167.96 REMARK 500 ARG A 253 48.74 -65.12 REMARK 500 ALA A 261 91.72 -65.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 ZINC HAS BEEN INTRODUCED BY SOAKING THE NATIVE CRYSTALS INTO 10MM REMARK 600 ZNSO4 FOR 2 MINUTES. ONE CHLORIDE ION HAS BEEN MODELED BUT THIS REMARK 600 POSITION MAY CORRESPOND TO A MIXTURE OF CHLORIDE ION AND WATER REMARK 600 MOLECULE. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 283 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 82 NE2 REMARK 620 2 GLU A 113 OE1 133.9 REMARK 620 3 GLU A 113 OE2 72.1 66.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 284 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DTE RELATED DB: PDB REMARK 900 APO FORM, SELENIO-PROTEIN REMARK 900 RELATED ID: 3DTI RELATED DB: PDB REMARK 900 ONE ZINC BOUND FORM DBREF 3DTK A 1 281 UNP B5B9W8 B5B9W8_9DEIO 1 281 SEQADV 3DTK MET A -19 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK GLY A -18 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK SER A -17 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK SER A -16 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK HIS A -15 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK HIS A -14 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK HIS A -13 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK HIS A -12 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK HIS A -11 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK HIS A -10 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK SER A -9 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK SER A -8 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK GLY A -7 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK GLU A -6 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK ASN A -5 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK LEU A -4 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK TYR A -3 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK PHE A -2 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK GLN A -1 UNP B5B9W8 EXPRESSION TAG SEQADV 3DTK GLY A 0 UNP B5B9W8 EXPRESSION TAG SEQRES 1 A 301 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 301 GLU ASN LEU TYR PHE GLN GLY MET THR ASP PRO ALA PRO SEQRES 3 A 301 PRO PRO THR ALA LEU ALA ALA ALA LYS ALA ARG MET ARG SEQRES 4 A 301 GLU LEU ALA ALA SER TYR GLY ALA GLY LEU PRO GLY ARG SEQRES 5 A 301 ASP THR HIS SER LEU MET HIS GLY LEU ASP GLY ILE THR SEQRES 6 A 301 LEU THR PHE MET PRO MET GLY GLN ARG ASP GLY ALA TYR SEQRES 7 A 301 ASP PRO GLU HIS HIS VAL ILE LEU ILE ASN SER GLN VAL SEQRES 8 A 301 ARG PRO GLU ARG GLN ARG PHE THR LEU ALA HIS GLU ILE SEQRES 9 A 301 SER HIS ALA LEU LEU LEU GLY ASP ASP ASP LEU LEU SER SEQRES 10 A 301 ASP LEU HIS ASP GLU TYR GLU GLY ASP ARG LEU GLU GLN SEQRES 11 A 301 VAL ILE GLU THR LEU CYS ASN VAL GLY ALA ALA ALA LEU SEQRES 12 A 301 LEU MET PRO ALA GLU LEU ILE ASP ASP LEU LEU THR ARG SEQRES 13 A 301 PHE GLY PRO THR GLY ARG ALA LEU ALA GLU LEU ALA ARG SEQRES 14 A 301 ARG ALA ASP VAL SER ALA THR SER ALA LEU TYR ALA LEU SEQRES 15 A 301 ALA GLU ARG THR ALA PRO PRO VAL ILE TYR ALA VAL CYS SEQRES 16 A 301 ALA LEU SER ARG GLN GLU ASP GLU GLY GLU GLY GLY GLY SEQRES 17 A 301 ALA LYS GLU LEU THR VAL ARG ALA SER SER ALA SER ALA SEQRES 18 A 301 GLY VAL LYS TYR SER LEU SER ALA GLY THR PRO VAL PRO SEQRES 19 A 301 ASP ASP HIS PRO ALA ALA LEU ALA LEU ASP THR ARG LEU SEQRES 20 A 301 PRO LEU ALA GLN ASP SER TYR VAL PRO PHE ARG SER GLY SEQRES 21 A 301 ARG ARG MET PRO ALA TYR VAL ASP ALA PHE PRO GLU ARG SEQRES 22 A 301 GLN ARG VAL LEU VAL SER PHE ALA LEU PRO ALA GLY ARG SEQRES 23 A 301 SER GLU PRO ASP ALA ASP LYS PRO GLU ALA PRO GLY ASP SEQRES 24 A 301 GLN SER HET CL A 282 1 HET ZN A 283 1 HET ZN A 284 1 HETNAM CL CHLORIDE ION HETNAM ZN ZINC ION FORMUL 2 CL CL 1- FORMUL 3 ZN 2(ZN 2+) HELIX 1 1 THR A 9 GLY A 28 1 20 HELIX 2 2 ASP A 33 GLY A 40 1 8 HELIX 3 3 ARG A 72 ASP A 92 1 21 HELIX 4 4 ASP A 92 ASP A 101 1 10 HELIX 5 5 GLY A 105 MET A 125 1 21 HELIX 6 6 PRO A 126 PHE A 137 1 12 HELIX 7 7 THR A 140 ASP A 152 1 13 HELIX 8 8 SER A 154 GLU A 164 1 11 HELIX 9 9 HIS A 217 THR A 225 1 9 SHEET 1 A 3 THR A 45 MET A 49 0 SHEET 2 A 3 VAL A 64 ASN A 68 1 O ILE A 65 N THR A 47 SHEET 3 A 3 GLY A 56 ASP A 59 -1 N ALA A 57 O LEU A 66 SHEET 1 B 6 PRO A 212 VAL A 213 0 SHEET 2 B 6 LEU A 192 ALA A 199 -1 N LEU A 192 O VAL A 213 SHEET 3 B 6 ILE A 171 LEU A 177 -1 N ALA A 176 O THR A 193 SHEET 4 B 6 VAL A 256 ALA A 261 -1 O VAL A 258 N ALA A 173 SHEET 5 B 6 ARG A 242 PRO A 251 -1 N PHE A 250 O LEU A 257 SHEET 6 B 6 GLN A 231 PRO A 236 -1 N VAL A 235 O MET A 243 LINK NE2 HIS A 82 ZN ZN A 283 1555 1555 2.07 LINK OE1 GLU A 113 ZN ZN A 283 1555 1555 2.00 LINK OE2 GLU A 113 ZN ZN A 283 1555 1555 2.00 SITE 1 AC1 2 GLU A 83 GLU A 113 SITE 1 AC2 2 HIS A 82 GLU A 113 SITE 1 AC3 2 GLU A 83 HIS A 86 CRYST1 87.260 52.672 63.221 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011460 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015818 0.00000