data_3DTM # _entry.id 3DTM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DTM pdb_00003dtm 10.2210/pdb3dtm/pdb RCSB RCSB048472 ? ? WWPDB D_1000048472 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-11-10 4 'Structure model' 1 3 2023-11-01 5 'Structure model' 1 4 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DTM _pdbx_database_status.recvd_initial_deposition_date 2008-07-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kather, I.' 1 'Jakob, R.P.' 2 'Dobbek, H.' 3 'Schmid, F.X.' 4 # _citation.id primary _citation.title 'Increased folding stability of TEM-1 beta-lactamase by in vitro selection' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 383 _citation.page_first 238 _citation.page_last 251 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18706424 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.07.082 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kather, I.' 1 ? primary 'Jakob, R.P.' 2 ? primary 'Dobbek, H.' 3 ? primary 'Schmid, F.X.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beta-lactamase 28857.896 1 3.5.2.6 'P62S, V80I, E147G, M182T, L201P, I208M, A224V, I246V, L273R' 'UNP residues 24-286' ? 2 water nat water 18.015 120 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Extended spectrum beta-lactamase, TEM extended spectrum beta-lactamase, Betalactamase TEM-116, Mutant extended-spectrum beta-lactamase precursor, Beta lactamase precursor ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRSEERFPMMSTFKVLLCGAILSRIDAGQEQLGRRIHYSQNDLVEY SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKGLTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPVA MATTLRKLLTGELLTPASRQQLMDWMEADKVAGPLLRSVLPAGWFIADKSGAGERGSRGIVAALGPDGKPSRIVVIYTTG SQATMDELNRQIAEIGASLIKHW ; _entity_poly.pdbx_seq_one_letter_code_can ;HPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRSEERFPMMSTFKVLLCGAILSRIDAGQEQLGRRIHYSQNDLVEY SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKGLTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPVA MATTLRKLLTGELLTPASRQQLMDWMEADKVAGPLLRSVLPAGWFIADKSGAGERGSRGIVAALGPDGKPSRIVVIYTTG SQATMDELNRQIAEIGASLIKHW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 PRO n 1 3 GLU n 1 4 THR n 1 5 LEU n 1 6 VAL n 1 7 LYS n 1 8 VAL n 1 9 LYS n 1 10 ASP n 1 11 ALA n 1 12 GLU n 1 13 ASP n 1 14 GLN n 1 15 LEU n 1 16 GLY n 1 17 ALA n 1 18 ARG n 1 19 VAL n 1 20 GLY n 1 21 TYR n 1 22 ILE n 1 23 GLU n 1 24 LEU n 1 25 ASP n 1 26 LEU n 1 27 ASN n 1 28 SER n 1 29 GLY n 1 30 LYS n 1 31 ILE n 1 32 LEU n 1 33 GLU n 1 34 SER n 1 35 PHE n 1 36 ARG n 1 37 SER n 1 38 GLU n 1 39 GLU n 1 40 ARG n 1 41 PHE n 1 42 PRO n 1 43 MET n 1 44 MET n 1 45 SER n 1 46 THR n 1 47 PHE n 1 48 LYS n 1 49 VAL n 1 50 LEU n 1 51 LEU n 1 52 CYS n 1 53 GLY n 1 54 ALA n 1 55 ILE n 1 56 LEU n 1 57 SER n 1 58 ARG n 1 59 ILE n 1 60 ASP n 1 61 ALA n 1 62 GLY n 1 63 GLN n 1 64 GLU n 1 65 GLN n 1 66 LEU n 1 67 GLY n 1 68 ARG n 1 69 ARG n 1 70 ILE n 1 71 HIS n 1 72 TYR n 1 73 SER n 1 74 GLN n 1 75 ASN n 1 76 ASP n 1 77 LEU n 1 78 VAL n 1 79 GLU n 1 80 TYR n 1 81 SER n 1 82 PRO n 1 83 VAL n 1 84 THR n 1 85 GLU n 1 86 LYS n 1 87 HIS n 1 88 LEU n 1 89 THR n 1 90 ASP n 1 91 GLY n 1 92 MET n 1 93 THR n 1 94 VAL n 1 95 ARG n 1 96 GLU n 1 97 LEU n 1 98 CYS n 1 99 SER n 1 100 ALA n 1 101 ALA n 1 102 ILE n 1 103 THR n 1 104 MET n 1 105 SER n 1 106 ASP n 1 107 ASN n 1 108 THR n 1 109 ALA n 1 110 ALA n 1 111 ASN n 1 112 LEU n 1 113 LEU n 1 114 LEU n 1 115 THR n 1 116 THR n 1 117 ILE n 1 118 GLY n 1 119 GLY n 1 120 PRO n 1 121 LYS n 1 122 GLY n 1 123 LEU n 1 124 THR n 1 125 ALA n 1 126 PHE n 1 127 LEU n 1 128 HIS n 1 129 ASN n 1 130 MET n 1 131 GLY n 1 132 ASP n 1 133 HIS n 1 134 VAL n 1 135 THR n 1 136 ARG n 1 137 LEU n 1 138 ASP n 1 139 ARG n 1 140 TRP n 1 141 GLU n 1 142 PRO n 1 143 GLU n 1 144 LEU n 1 145 ASN n 1 146 GLU n 1 147 ALA n 1 148 ILE n 1 149 PRO n 1 150 ASN n 1 151 ASP n 1 152 GLU n 1 153 ARG n 1 154 ASP n 1 155 THR n 1 156 THR n 1 157 THR n 1 158 PRO n 1 159 VAL n 1 160 ALA n 1 161 MET n 1 162 ALA n 1 163 THR n 1 164 THR n 1 165 LEU n 1 166 ARG n 1 167 LYS n 1 168 LEU n 1 169 LEU n 1 170 THR n 1 171 GLY n 1 172 GLU n 1 173 LEU n 1 174 LEU n 1 175 THR n 1 176 PRO n 1 177 ALA n 1 178 SER n 1 179 ARG n 1 180 GLN n 1 181 GLN n 1 182 LEU n 1 183 MET n 1 184 ASP n 1 185 TRP n 1 186 MET n 1 187 GLU n 1 188 ALA n 1 189 ASP n 1 190 LYS n 1 191 VAL n 1 192 ALA n 1 193 GLY n 1 194 PRO n 1 195 LEU n 1 196 LEU n 1 197 ARG n 1 198 SER n 1 199 VAL n 1 200 LEU n 1 201 PRO n 1 202 ALA n 1 203 GLY n 1 204 TRP n 1 205 PHE n 1 206 ILE n 1 207 ALA n 1 208 ASP n 1 209 LYS n 1 210 SER n 1 211 GLY n 1 212 ALA n 1 213 GLY n 1 214 GLU n 1 215 ARG n 1 216 GLY n 1 217 SER n 1 218 ARG n 1 219 GLY n 1 220 ILE n 1 221 VAL n 1 222 ALA n 1 223 ALA n 1 224 LEU n 1 225 GLY n 1 226 PRO n 1 227 ASP n 1 228 GLY n 1 229 LYS n 1 230 PRO n 1 231 SER n 1 232 ARG n 1 233 ILE n 1 234 VAL n 1 235 VAL n 1 236 ILE n 1 237 TYR n 1 238 THR n 1 239 THR n 1 240 GLY n 1 241 SER n 1 242 GLN n 1 243 ALA n 1 244 THR n 1 245 MET n 1 246 ASP n 1 247 GLU n 1 248 LEU n 1 249 ASN n 1 250 ARG n 1 251 GLN n 1 252 ILE n 1 253 ALA n 1 254 GLU n 1 255 ILE n 1 256 GLY n 1 257 ALA n 1 258 SER n 1 259 LEU n 1 260 ILE n 1 261 LYS n 1 262 HIS n 1 263 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'BL21 DE3' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 469008 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTAC11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 26 26 HIS HIS A . n A 1 2 PRO 2 27 27 PRO PRO A . n A 1 3 GLU 3 28 28 GLU GLU A . n A 1 4 THR 4 29 29 THR THR A . n A 1 5 LEU 5 30 30 LEU LEU A . n A 1 6 VAL 6 31 31 VAL VAL A . n A 1 7 LYS 7 32 32 LYS LYS A . n A 1 8 VAL 8 33 33 VAL VAL A . n A 1 9 LYS 9 34 34 LYS LYS A . n A 1 10 ASP 10 35 35 ASP ASP A . n A 1 11 ALA 11 36 36 ALA ALA A . n A 1 12 GLU 12 37 37 GLU GLU A . n A 1 13 ASP 13 38 38 ASP ASP A . n A 1 14 GLN 14 39 39 GLN GLN A . n A 1 15 LEU 15 40 40 LEU LEU A . n A 1 16 GLY 16 41 41 GLY GLY A . n A 1 17 ALA 17 42 42 ALA ALA A . n A 1 18 ARG 18 43 43 ARG ARG A . n A 1 19 VAL 19 44 44 VAL VAL A . n A 1 20 GLY 20 45 45 GLY GLY A . n A 1 21 TYR 21 46 46 TYR TYR A . n A 1 22 ILE 22 47 47 ILE ILE A . n A 1 23 GLU 23 48 48 GLU GLU A . n A 1 24 LEU 24 49 49 LEU LEU A . n A 1 25 ASP 25 50 50 ASP ASP A . n A 1 26 LEU 26 51 51 LEU LEU A . n A 1 27 ASN 27 52 52 ASN ASN A . n A 1 28 SER 28 53 53 SER SER A . n A 1 29 GLY 29 54 54 GLY GLY A . n A 1 30 LYS 30 55 55 LYS LYS A . n A 1 31 ILE 31 56 56 ILE ILE A . n A 1 32 LEU 32 57 57 LEU LEU A . n A 1 33 GLU 33 58 58 GLU GLU A . n A 1 34 SER 34 59 59 SER SER A . n A 1 35 PHE 35 60 60 PHE PHE A . n A 1 36 ARG 36 61 61 ARG ARG A . n A 1 37 SER 37 62 62 SER SER A . n A 1 38 GLU 38 63 63 GLU GLU A . n A 1 39 GLU 39 64 64 GLU GLU A . n A 1 40 ARG 40 65 65 ARG ARG A . n A 1 41 PHE 41 66 66 PHE PHE A . n A 1 42 PRO 42 67 67 PRO PRO A . n A 1 43 MET 43 68 68 MET MET A . n A 1 44 MET 44 69 69 MET MET A . n A 1 45 SER 45 70 70 SER SER A . n A 1 46 THR 46 71 71 THR THR A . n A 1 47 PHE 47 72 72 PHE PHE A . n A 1 48 LYS 48 73 73 LYS LYS A . n A 1 49 VAL 49 74 74 VAL VAL A . n A 1 50 LEU 50 75 75 LEU LEU A . n A 1 51 LEU 51 76 76 LEU LEU A . n A 1 52 CYS 52 77 77 CYS CYS A . n A 1 53 GLY 53 78 78 GLY GLY A . n A 1 54 ALA 54 79 79 ALA ALA A . n A 1 55 ILE 55 80 80 ILE ILE A . n A 1 56 LEU 56 81 81 LEU LEU A . n A 1 57 SER 57 82 82 SER SER A . n A 1 58 ARG 58 83 83 ARG ARG A . n A 1 59 ILE 59 84 84 ILE ILE A . n A 1 60 ASP 60 85 85 ASP ASP A . n A 1 61 ALA 61 86 86 ALA ALA A . n A 1 62 GLY 62 87 87 GLY GLY A . n A 1 63 GLN 63 88 88 GLN GLN A . n A 1 64 GLU 64 89 89 GLU GLU A . n A 1 65 GLN 65 90 90 GLN GLN A . n A 1 66 LEU 66 91 91 LEU LEU A . n A 1 67 GLY 67 92 92 GLY GLY A . n A 1 68 ARG 68 93 93 ARG ARG A . n A 1 69 ARG 69 94 94 ARG ARG A . n A 1 70 ILE 70 95 95 ILE ILE A . n A 1 71 HIS 71 96 96 HIS HIS A . n A 1 72 TYR 72 97 97 TYR TYR A . n A 1 73 SER 73 98 98 SER SER A . n A 1 74 GLN 74 99 99 GLN GLN A . n A 1 75 ASN 75 100 100 ASN ASN A . n A 1 76 ASP 76 101 101 ASP ASP A . n A 1 77 LEU 77 102 102 LEU LEU A . n A 1 78 VAL 78 103 103 VAL VAL A . n A 1 79 GLU 79 104 104 GLU GLU A . n A 1 80 TYR 80 105 105 TYR TYR A . n A 1 81 SER 81 106 106 SER SER A . n A 1 82 PRO 82 107 107 PRO PRO A . n A 1 83 VAL 83 108 108 VAL VAL A . n A 1 84 THR 84 109 109 THR THR A . n A 1 85 GLU 85 110 110 GLU GLU A . n A 1 86 LYS 86 111 111 LYS LYS A . n A 1 87 HIS 87 112 112 HIS HIS A . n A 1 88 LEU 88 113 113 LEU LEU A . n A 1 89 THR 89 114 114 THR THR A . n A 1 90 ASP 90 115 115 ASP ASP A . n A 1 91 GLY 91 116 116 GLY GLY A . n A 1 92 MET 92 117 117 MET MET A . n A 1 93 THR 93 118 118 THR THR A . n A 1 94 VAL 94 119 119 VAL VAL A . n A 1 95 ARG 95 120 120 ARG ARG A . n A 1 96 GLU 96 121 121 GLU GLU A . n A 1 97 LEU 97 122 122 LEU LEU A . n A 1 98 CYS 98 123 123 CYS CYS A . n A 1 99 SER 99 124 124 SER SER A . n A 1 100 ALA 100 125 125 ALA ALA A . n A 1 101 ALA 101 126 126 ALA ALA A . n A 1 102 ILE 102 127 127 ILE ILE A . n A 1 103 THR 103 128 128 THR THR A . n A 1 104 MET 104 129 129 MET MET A . n A 1 105 SER 105 130 130 SER SER A . n A 1 106 ASP 106 131 131 ASP ASP A . n A 1 107 ASN 107 132 132 ASN ASN A . n A 1 108 THR 108 133 133 THR THR A . n A 1 109 ALA 109 134 134 ALA ALA A . n A 1 110 ALA 110 135 135 ALA ALA A . n A 1 111 ASN 111 136 136 ASN ASN A . n A 1 112 LEU 112 137 137 LEU LEU A . n A 1 113 LEU 113 138 138 LEU LEU A . n A 1 114 LEU 114 139 139 LEU LEU A . n A 1 115 THR 115 140 140 THR THR A . n A 1 116 THR 116 141 141 THR THR A . n A 1 117 ILE 117 142 142 ILE ILE A . n A 1 118 GLY 118 143 143 GLY GLY A . n A 1 119 GLY 119 144 144 GLY GLY A . n A 1 120 PRO 120 145 145 PRO PRO A . n A 1 121 LYS 121 146 146 LYS LYS A . n A 1 122 GLY 122 147 147 GLY GLY A . n A 1 123 LEU 123 148 148 LEU LEU A . n A 1 124 THR 124 149 149 THR THR A . n A 1 125 ALA 125 150 150 ALA ALA A . n A 1 126 PHE 126 151 151 PHE PHE A . n A 1 127 LEU 127 152 152 LEU LEU A . n A 1 128 HIS 128 153 153 HIS HIS A . n A 1 129 ASN 129 154 154 ASN ASN A . n A 1 130 MET 130 155 155 MET MET A . n A 1 131 GLY 131 156 156 GLY GLY A . n A 1 132 ASP 132 157 157 ASP ASP A . n A 1 133 HIS 133 158 158 HIS HIS A . n A 1 134 VAL 134 159 159 VAL VAL A . n A 1 135 THR 135 160 160 THR THR A . n A 1 136 ARG 136 161 161 ARG ARG A . n A 1 137 LEU 137 162 162 LEU LEU A . n A 1 138 ASP 138 163 163 ASP ASP A . n A 1 139 ARG 139 164 164 ARG ARG A . n A 1 140 TRP 140 165 165 TRP TRP A . n A 1 141 GLU 141 166 166 GLU GLU A . n A 1 142 PRO 142 167 167 PRO PRO A . n A 1 143 GLU 143 168 168 GLU GLU A . n A 1 144 LEU 144 169 169 LEU LEU A . n A 1 145 ASN 145 170 170 ASN ASN A . n A 1 146 GLU 146 171 171 GLU GLU A . n A 1 147 ALA 147 172 172 ALA ALA A . n A 1 148 ILE 148 173 173 ILE ILE A . n A 1 149 PRO 149 174 174 PRO PRO A . n A 1 150 ASN 150 175 175 ASN ASN A . n A 1 151 ASP 151 176 176 ASP ASP A . n A 1 152 GLU 152 177 177 GLU GLU A . n A 1 153 ARG 153 178 178 ARG ARG A . n A 1 154 ASP 154 179 179 ASP ASP A . n A 1 155 THR 155 180 180 THR THR A . n A 1 156 THR 156 181 181 THR THR A . n A 1 157 THR 157 182 182 THR THR A . n A 1 158 PRO 158 183 183 PRO PRO A . n A 1 159 VAL 159 184 184 VAL VAL A . n A 1 160 ALA 160 185 185 ALA ALA A . n A 1 161 MET 161 186 186 MET MET A . n A 1 162 ALA 162 187 187 ALA ALA A . n A 1 163 THR 163 188 188 THR THR A . n A 1 164 THR 164 189 189 THR THR A . n A 1 165 LEU 165 190 190 LEU LEU A . n A 1 166 ARG 166 191 191 ARG ARG A . n A 1 167 LYS 167 192 192 LYS LYS A . n A 1 168 LEU 168 193 193 LEU LEU A . n A 1 169 LEU 169 194 194 LEU LEU A . n A 1 170 THR 170 195 195 THR THR A . n A 1 171 GLY 171 196 196 GLY GLY A . n A 1 172 GLU 172 197 197 GLU GLU A . n A 1 173 LEU 173 198 198 LEU LEU A . n A 1 174 LEU 174 199 199 LEU LEU A . n A 1 175 THR 175 200 200 THR THR A . n A 1 176 PRO 176 201 201 PRO PRO A . n A 1 177 ALA 177 202 202 ALA ALA A . n A 1 178 SER 178 203 203 SER SER A . n A 1 179 ARG 179 204 204 ARG ARG A . n A 1 180 GLN 180 205 205 GLN GLN A . n A 1 181 GLN 181 206 206 GLN GLN A . n A 1 182 LEU 182 207 207 LEU LEU A . n A 1 183 MET 183 208 208 MET MET A . n A 1 184 ASP 184 209 209 ASP ASP A . n A 1 185 TRP 185 210 210 TRP TRP A . n A 1 186 MET 186 211 211 MET MET A . n A 1 187 GLU 187 212 212 GLU GLU A . n A 1 188 ALA 188 213 213 ALA ALA A . n A 1 189 ASP 189 214 214 ASP ASP A . n A 1 190 LYS 190 215 215 LYS LYS A . n A 1 191 VAL 191 216 216 VAL VAL A . n A 1 192 ALA 192 217 217 ALA ALA A . n A 1 193 GLY 193 218 218 GLY GLY A . n A 1 194 PRO 194 219 219 PRO PRO A . n A 1 195 LEU 195 220 220 LEU LEU A . n A 1 196 LEU 196 221 221 LEU LEU A . n A 1 197 ARG 197 222 222 ARG ARG A . n A 1 198 SER 198 223 223 SER SER A . n A 1 199 VAL 199 224 224 VAL VAL A . n A 1 200 LEU 200 225 225 LEU LEU A . n A 1 201 PRO 201 226 226 PRO PRO A . n A 1 202 ALA 202 227 227 ALA ALA A . n A 1 203 GLY 203 228 228 GLY GLY A . n A 1 204 TRP 204 229 229 TRP TRP A . n A 1 205 PHE 205 230 230 PHE PHE A . n A 1 206 ILE 206 231 231 ILE ILE A . n A 1 207 ALA 207 232 232 ALA ALA A . n A 1 208 ASP 208 233 233 ASP ASP A . n A 1 209 LYS 209 234 234 LYS LYS A . n A 1 210 SER 210 235 235 SER SER A . n A 1 211 GLY 211 236 236 GLY GLY A . n A 1 212 ALA 212 237 237 ALA ALA A . n A 1 213 GLY 213 238 238 GLY GLY A . n A 1 214 GLU 214 239 239 GLU GLU A . n A 1 215 ARG 215 240 240 ARG ARG A . n A 1 216 GLY 216 241 241 GLY GLY A . n A 1 217 SER 217 242 242 SER SER A . n A 1 218 ARG 218 243 243 ARG ARG A . n A 1 219 GLY 219 244 244 GLY GLY A . n A 1 220 ILE 220 245 245 ILE ILE A . n A 1 221 VAL 221 246 246 VAL VAL A . n A 1 222 ALA 222 247 247 ALA ALA A . n A 1 223 ALA 223 248 248 ALA ALA A . n A 1 224 LEU 224 249 249 LEU LEU A . n A 1 225 GLY 225 250 250 GLY GLY A . n A 1 226 PRO 226 251 251 PRO PRO A . n A 1 227 ASP 227 252 252 ASP ASP A . n A 1 228 GLY 228 253 253 GLY GLY A . n A 1 229 LYS 229 254 254 LYS LYS A . n A 1 230 PRO 230 255 255 PRO PRO A . n A 1 231 SER 231 256 256 SER SER A . n A 1 232 ARG 232 257 257 ARG ARG A . n A 1 233 ILE 233 258 258 ILE ILE A . n A 1 234 VAL 234 259 259 VAL VAL A . n A 1 235 VAL 235 260 260 VAL VAL A . n A 1 236 ILE 236 261 261 ILE ILE A . n A 1 237 TYR 237 262 262 TYR TYR A . n A 1 238 THR 238 263 263 THR THR A . n A 1 239 THR 239 264 264 THR THR A . n A 1 240 GLY 240 265 265 GLY GLY A . n A 1 241 SER 241 266 266 SER SER A . n A 1 242 GLN 242 267 267 GLN GLN A . n A 1 243 ALA 243 268 268 ALA ALA A . n A 1 244 THR 244 269 269 THR THR A . n A 1 245 MET 245 270 270 MET MET A . n A 1 246 ASP 246 271 271 ASP ASP A . n A 1 247 GLU 247 272 272 GLU GLU A . n A 1 248 LEU 248 273 273 LEU LEU A . n A 1 249 ASN 249 274 274 ASN ASN A . n A 1 250 ARG 250 275 275 ARG ARG A . n A 1 251 GLN 251 276 276 GLN GLN A . n A 1 252 ILE 252 277 277 ILE ILE A . n A 1 253 ALA 253 278 278 ALA ALA A . n A 1 254 GLU 254 279 279 GLU GLU A . n A 1 255 ILE 255 280 280 ILE ILE A . n A 1 256 GLY 256 281 281 GLY GLY A . n A 1 257 ALA 257 282 282 ALA ALA A . n A 1 258 SER 258 283 283 SER SER A . n A 1 259 LEU 259 284 284 LEU LEU A . n A 1 260 ILE 260 285 285 ILE ILE A . n A 1 261 LYS 261 286 286 LYS LYS A . n A 1 262 HIS 262 287 287 HIS HIS A . n A 1 263 TRP 263 288 288 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 289 1 HOH HOH A . B 2 HOH 2 290 2 HOH HOH A . B 2 HOH 3 291 3 HOH HOH A . B 2 HOH 4 292 4 HOH HOH A . B 2 HOH 5 293 5 HOH HOH A . B 2 HOH 6 294 6 HOH HOH A . B 2 HOH 7 295 7 HOH HOH A . B 2 HOH 8 296 8 HOH HOH A . B 2 HOH 9 297 9 HOH HOH A . B 2 HOH 10 298 11 HOH HOH A . B 2 HOH 11 299 12 HOH HOH A . B 2 HOH 12 300 13 HOH HOH A . B 2 HOH 13 301 14 HOH HOH A . B 2 HOH 14 302 15 HOH HOH A . B 2 HOH 15 303 16 HOH HOH A . B 2 HOH 16 304 17 HOH HOH A . B 2 HOH 17 305 18 HOH HOH A . B 2 HOH 18 306 19 HOH HOH A . B 2 HOH 19 307 20 HOH HOH A . B 2 HOH 20 308 21 HOH HOH A . B 2 HOH 21 309 22 HOH HOH A . B 2 HOH 22 310 23 HOH HOH A . B 2 HOH 23 311 24 HOH HOH A . B 2 HOH 24 312 25 HOH HOH A . B 2 HOH 25 313 26 HOH HOH A . B 2 HOH 26 314 27 HOH HOH A . B 2 HOH 27 315 28 HOH HOH A . B 2 HOH 28 316 29 HOH HOH A . B 2 HOH 29 317 30 HOH HOH A . B 2 HOH 30 318 31 HOH HOH A . B 2 HOH 31 319 32 HOH HOH A . B 2 HOH 32 320 33 HOH HOH A . B 2 HOH 33 321 34 HOH HOH A . B 2 HOH 34 322 35 HOH HOH A . B 2 HOH 35 323 36 HOH HOH A . B 2 HOH 36 324 37 HOH HOH A . B 2 HOH 37 325 38 HOH HOH A . B 2 HOH 38 326 39 HOH HOH A . B 2 HOH 39 327 40 HOH HOH A . B 2 HOH 40 328 41 HOH HOH A . B 2 HOH 41 329 42 HOH HOH A . B 2 HOH 42 330 43 HOH HOH A . B 2 HOH 43 331 45 HOH HOH A . B 2 HOH 44 332 46 HOH HOH A . B 2 HOH 45 333 47 HOH HOH A . B 2 HOH 46 334 48 HOH HOH A . B 2 HOH 47 335 49 HOH HOH A . B 2 HOH 48 336 50 HOH HOH A . B 2 HOH 49 337 51 HOH HOH A . B 2 HOH 50 338 52 HOH HOH A . B 2 HOH 51 339 53 HOH HOH A . B 2 HOH 52 340 54 HOH HOH A . B 2 HOH 53 341 55 HOH HOH A . B 2 HOH 54 342 56 HOH HOH A . B 2 HOH 55 343 57 HOH HOH A . B 2 HOH 56 344 58 HOH HOH A . B 2 HOH 57 345 59 HOH HOH A . B 2 HOH 58 346 60 HOH HOH A . B 2 HOH 59 347 61 HOH HOH A . B 2 HOH 60 348 62 HOH HOH A . B 2 HOH 61 349 63 HOH HOH A . B 2 HOH 62 350 64 HOH HOH A . B 2 HOH 63 351 65 HOH HOH A . B 2 HOH 64 352 66 HOH HOH A . B 2 HOH 65 353 67 HOH HOH A . B 2 HOH 66 354 68 HOH HOH A . B 2 HOH 67 355 69 HOH HOH A . B 2 HOH 68 356 70 HOH HOH A . B 2 HOH 69 357 71 HOH HOH A . B 2 HOH 70 358 72 HOH HOH A . B 2 HOH 71 359 73 HOH HOH A . B 2 HOH 72 360 74 HOH HOH A . B 2 HOH 73 361 75 HOH HOH A . B 2 HOH 74 362 76 HOH HOH A . B 2 HOH 75 363 77 HOH HOH A . B 2 HOH 76 364 78 HOH HOH A . B 2 HOH 77 365 79 HOH HOH A . B 2 HOH 78 366 80 HOH HOH A . B 2 HOH 79 367 82 HOH HOH A . B 2 HOH 80 368 83 HOH HOH A . B 2 HOH 81 369 84 HOH HOH A . B 2 HOH 82 370 1 HOH HOH A . B 2 HOH 83 371 2 HOH HOH A . B 2 HOH 84 372 3 HOH HOH A . B 2 HOH 85 373 4 HOH HOH A . B 2 HOH 86 374 5 HOH HOH A . B 2 HOH 87 375 6 HOH HOH A . B 2 HOH 88 376 7 HOH HOH A . B 2 HOH 89 377 9 HOH HOH A . B 2 HOH 90 378 10 HOH HOH A . B 2 HOH 91 379 12 HOH HOH A . B 2 HOH 92 380 13 HOH HOH A . B 2 HOH 93 381 14 HOH HOH A . B 2 HOH 94 382 15 HOH HOH A . B 2 HOH 95 383 16 HOH HOH A . B 2 HOH 96 384 17 HOH HOH A . B 2 HOH 97 385 18 HOH HOH A . B 2 HOH 98 386 19 HOH HOH A . B 2 HOH 99 387 20 HOH HOH A . B 2 HOH 100 388 23 HOH HOH A . B 2 HOH 101 389 24 HOH HOH A . B 2 HOH 102 390 25 HOH HOH A . B 2 HOH 103 391 26 HOH HOH A . B 2 HOH 104 392 27 HOH HOH A . B 2 HOH 105 393 28 HOH HOH A . B 2 HOH 106 394 29 HOH HOH A . B 2 HOH 107 395 30 HOH HOH A . B 2 HOH 108 396 31 HOH HOH A . B 2 HOH 109 397 32 HOH HOH A . B 2 HOH 110 398 33 HOH HOH A . B 2 HOH 111 399 34 HOH HOH A . B 2 HOH 112 400 35 HOH HOH A . B 2 HOH 113 401 36 HOH HOH A . B 2 HOH 114 402 37 HOH HOH A . B 2 HOH 115 403 38 HOH HOH A . B 2 HOH 116 404 39 HOH HOH A . B 2 HOH 117 405 40 HOH HOH A . B 2 HOH 118 406 42 HOH HOH A . B 2 HOH 119 407 44 HOH HOH A . B 2 HOH 120 408 45 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MAR345dtb 'data collection' . ? 2 XDS 'data reduction' . ? 3 ADDREF 'data scaling' . ? 4 AMoRE phasing . ? 5 # _cell.entry_id 3DTM _cell.length_a 39.820 _cell.length_b 79.680 _cell.length_c 87.070 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DTM _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3DTM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '1.6-1.8 M Ammonium citrate, 5% PEG 400, 0.1M Tris buffer, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2006-12-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3DTM _reflns.observed_criterion_sigma_F 5 _reflns.observed_criterion_sigma_I 8.3 _reflns.d_resolution_high 1.86 _reflns.d_resolution_low 19.59 _reflns.number_all 23406 _reflns.number_obs 23406 _reflns.percent_possible_obs 99.75 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.86 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_all 97.6 _reflns_shell.Rmerge_I_obs 0.348 _reflns_shell.pdbx_Rsym_value 0.348 _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs 1056 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3DTM _refine.ls_number_reflns_obs 18342 _refine.ls_number_reflns_all 18342 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.41 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.75 _refine.ls_R_factor_obs 0.21785 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.27163 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 991 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.892 _refine.correlation_coeff_Fo_to_Fc_free 0.830 _refine.B_iso_mean 6.495 _refine.aniso_B[1][1] 0.03 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.04 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1BTL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.206 _refine.pdbx_overall_ESU_R_Free 0.189 _refine.overall_SU_ML 0.139 _refine.overall_SU_B 5.063 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2021 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 120 _refine_hist.number_atoms_total 2141 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 19.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 2056 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.361 1.976 ? 2787 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.757 5.000 ? 262 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.340 23.908 ? 87 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.645 15.000 ? 364 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.544 15.000 ? 17 'X-RAY DIFFRACTION' ? r_chiral_restr 0.088 0.200 ? 322 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1532 'X-RAY DIFFRACTION' ? r_nbd_refined 0.208 0.200 ? 1060 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.299 0.200 ? 1448 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.169 0.200 ? 143 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.194 0.200 ? 25 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.231 0.200 ? 12 'X-RAY DIFFRACTION' ? r_mcbond_it 0.606 1.500 ? 1336 'X-RAY DIFFRACTION' ? r_mcangle_it 1.006 2.000 ? 2100 'X-RAY DIFFRACTION' ? r_scbond_it 1.670 3.000 ? 799 'X-RAY DIFFRACTION' ? r_scangle_it 2.773 4.500 ? 687 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.051 _refine_ls_shell.number_reflns_R_work 1283 _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.percent_reflns_obs 99.85 _refine_ls_shell.R_factor_R_free 0.296 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3DTM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3DTM _struct.title 'Increased folding stability of TEM-1 beta-lactamase by in-vitro selection' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DTM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'TEM-1 Beta-Lactamase, Hydrolase, Antibiotic resistance, Plasmid' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q79DR3_ECOLX _struct_ref.pdbx_db_accession Q79DR3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVA MATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTG SQATMDERNRQIAEIGASLIKHW ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DTM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 263 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q79DR3 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 286 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 288 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DTM SER A 37 ? UNP Q79DR3 PRO 60 'engineered mutation' 62 1 1 3DTM ILE A 55 ? UNP Q79DR3 VAL 78 'engineered mutation' 80 2 1 3DTM GLY A 122 ? UNP Q79DR3 GLU 145 'engineered mutation' 147 3 1 3DTM THR A 157 ? UNP Q79DR3 MET 180 'engineered mutation' 182 4 1 3DTM PRO A 176 ? UNP Q79DR3 LEU 199 'engineered mutation' 201 5 1 3DTM MET A 183 ? UNP Q79DR3 ILE 206 'engineered mutation' 208 6 1 3DTM VAL A 199 ? UNP Q79DR3 ALA 222 'engineered mutation' 224 7 1 3DTM VAL A 221 ? UNP Q79DR3 ILE 244 'engineered mutation' 246 8 1 3DTM LEU A 248 ? UNP Q79DR3 ARG 271 'engineered mutation' 273 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 1 ? GLY A 16 ? HIS A 26 GLY A 41 1 ? 16 HELX_P HELX_P2 2 THR A 46 ? ALA A 61 ? THR A 71 ALA A 86 1 ? 16 HELX_P HELX_P3 3 SER A 73 ? LEU A 77 ? SER A 98 LEU A 102 5 ? 5 HELX_P HELX_P4 4 VAL A 83 ? HIS A 87 ? VAL A 108 HIS A 112 5 ? 5 HELX_P HELX_P5 5 VAL A 94 ? MET A 104 ? VAL A 119 MET A 129 1 ? 11 HELX_P HELX_P6 6 ASP A 106 ? ILE A 117 ? ASP A 131 ILE A 142 1 ? 12 HELX_P HELX_P7 7 GLY A 118 ? MET A 130 ? GLY A 143 MET A 155 1 ? 13 HELX_P HELX_P8 8 PRO A 142 ? GLU A 146 ? PRO A 167 GLU A 171 5 ? 5 HELX_P HELX_P9 9 THR A 157 ? GLY A 171 ? THR A 182 GLY A 196 1 ? 15 HELX_P HELX_P10 10 THR A 175 ? ALA A 188 ? THR A 200 ALA A 213 1 ? 14 HELX_P HELX_P11 11 LEU A 195 ? LEU A 200 ? LEU A 220 LEU A 225 5 ? 6 HELX_P HELX_P12 12 THR A 244 ? HIS A 262 ? THR A 269 HIS A 287 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 52 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 98 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 77 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 123 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 52 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 98 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 77 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 123 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 141 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 166 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 142 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 167 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.33 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 31 ? PHE A 35 ? ILE A 56 PHE A 60 A 2 ARG A 18 ? ASP A 25 ? ARG A 43 ASP A 50 A 3 ARG A 232 ? THR A 239 ? ARG A 257 THR A 264 A 4 ARG A 218 ? GLY A 225 ? ARG A 243 GLY A 250 A 5 PHE A 205 ? ALA A 212 ? PHE A 230 ALA A 237 B 1 PHE A 41 ? PRO A 42 ? PHE A 66 PRO A 67 B 2 THR A 155 ? THR A 156 ? THR A 180 THR A 181 C 1 ARG A 69 ? ILE A 70 ? ARG A 94 ILE A 95 C 2 MET A 92 ? THR A 93 ? MET A 117 THR A 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 35 ? O PHE A 60 N TYR A 21 ? N TYR A 46 A 2 3 N LEU A 24 ? N LEU A 49 O ILE A 233 ? O ILE A 258 A 3 4 O ILE A 236 ? O ILE A 261 N ILE A 220 ? N ILE A 245 A 4 5 O GLY A 225 ? O GLY A 250 N PHE A 205 ? N PHE A 230 B 1 2 N PHE A 41 ? N PHE A 66 O THR A 156 ? O THR A 181 C 1 2 N ILE A 70 ? N ILE A 95 O MET A 92 ? O MET A 117 # _pdbx_entry_details.entry_id 3DTM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 120 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 120 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 120 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.13 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.17 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 69 ? ? 62.79 -134.06 2 1 TYR A 105 ? ? 56.77 71.18 3 1 ASP A 163 ? ? -133.40 -32.81 4 1 LEU A 220 ? ? -93.54 -120.41 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BTL _pdbx_initial_refinement_model.details 'PDB ENTRY 1BTL' # _atom_sites.entry_id 3DTM _atom_sites.fract_transf_matrix[1][1] 0.025113 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012550 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011485 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_