HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JUL-08 3DTN TITLE CRYSTAL STRUCTURE OF PUTATIVE METHYLTRANSFERASE-MM_2633 FROM TITLE 2 METHANOSARCINA MAZEI . COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE METHYLTRANSFERASE MM_2633; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; SOURCE 3 ORGANISM_COMMON: METHANOSARCINA FRISIA; SOURCE 4 ORGANISM_TAXID: 2209; SOURCE 5 GENE: MM_2633; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,R.TORO,A.J.MEYER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX AUTHOR 2 RESEARCH CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 21-FEB-24 3DTN 1 REMARK REVDAT 4 10-FEB-21 3DTN 1 AUTHOR JRNL REMARK LINK REVDAT 3 25-OCT-17 3DTN 1 REMARK REVDAT 2 24-FEB-09 3DTN 1 VERSN REVDAT 1 09-SEP-08 3DTN 0 JRNL AUTH U.A.RAMAGOPAL,R.TORO,A.J.MEYER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE METHYLTRANSFERASE-MM_2633 FROM JRNL TITL 2 METHANOSARCINA MAZEI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 28838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1468 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1415 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.1720 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3511 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.66000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -1.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.94000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.217 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.186 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.211 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3586 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4821 ; 1.541 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 430 ; 5.743 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 183 ;37.071 ;24.645 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 652 ;17.186 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.383 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 512 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2721 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2150 ; 1.025 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3438 ; 1.930 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1436 ; 3.179 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1383 ; 5.058 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DTN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048473. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28850 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 21.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.12100 REMARK 200 R SYM FOR SHELL (I) : 0.12500 REMARK 200 FOR SHELL : 9.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELXD, CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M ACETATE PH 4.5, 30% PEG400, 0.2 REMARK 280 M CALCIUM ACETATE MONOHYDRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.97000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 GLU A 182 REMARK 465 ARG A 183 REMARK 465 SER A 184 REMARK 465 LYS A 185 REMARK 465 GLU A 225 REMARK 465 GLY A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 ILE B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 6 REMARK 465 LYS B 7 REMARK 465 PHE B 8 REMARK 465 ASP B 9 REMARK 465 ALA B 10 REMARK 465 VAL B 11 REMARK 465 GLU B 225 REMARK 465 GLY B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 TYR A 181 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 186 CG CD1 CD2 REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 LYS B 185 CG CD CE NZ REMARK 470 LEU B 186 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 66 CG GLU B 66 CD 0.092 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 58.39 -116.48 REMARK 500 ASN A 89 119.78 -31.32 REMARK 500 TYR A 99 -9.31 -57.23 REMARK 500 SER A 116 -43.56 -135.00 REMARK 500 ALA A 179 0.99 -58.30 REMARK 500 TYR A 214 -120.51 49.43 REMARK 500 ASP B 40 33.50 -85.60 REMARK 500 ARG B 87 123.36 -35.25 REMARK 500 SER B 116 -39.77 -138.81 REMARK 500 TYR B 214 -115.52 45.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 233 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 76 OE2 REMARK 620 2 GLU A 96 OE1 93.8 REMARK 620 3 GLU A 96 OE2 85.4 50.7 REMARK 620 4 HOH A 277 O 79.5 127.8 77.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 233 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 76 OE2 REMARK 620 2 GLU B 96 OE1 85.3 REMARK 620 3 GLU B 96 OE2 88.2 50.8 REMARK 620 4 HOH B 305 O 97.0 77.2 127.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 234 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11121C RELATED DB: TARGETDB DBREF 3DTN A 2 224 UNP Q8PTS9 Q8PTS9_METMA 1 223 DBREF 3DTN B 2 224 UNP Q8PTS9 Q8PTS9_METMA 1 223 SEQADV 3DTN MET A -1 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN SER A 0 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN LEU A 1 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN GLU A 225 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN GLY A 226 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS A 227 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS A 228 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS A 229 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS A 230 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS A 231 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS A 232 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN MET B -1 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN SER B 0 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN LEU B 1 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN GLU B 225 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN GLY B 226 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS B 227 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS B 228 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS B 229 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS B 230 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS B 231 UNP Q8PTS9 EXPRESSION TAG SEQADV 3DTN HIS B 232 UNP Q8PTS9 EXPRESSION TAG SEQRES 1 A 234 MET SER LEU SER GLU ILE LYS ARG LYS PHE ASP ALA VAL SEQRES 2 A 234 SER GLY LYS TYR ASP GLU GLN ARG ARG LYS PHE ILE PRO SEQRES 3 A 234 CYS PHE ASP ASP PHE TYR GLY VAL SER VAL SER ILE ALA SEQRES 4 A 234 SER VAL ASP THR GLU ASN PRO ASP ILE LEU ASP LEU GLY SEQRES 5 A 234 ALA GLY THR GLY LEU LEU SER ALA PHE LEU MET GLU LYS SEQRES 6 A 234 TYR PRO GLU ALA THR PHE THR LEU VAL ASP MET SER GLU SEQRES 7 A 234 LYS MET LEU GLU ILE ALA LYS ASN ARG PHE ARG GLY ASN SEQRES 8 A 234 LEU LYS VAL LYS TYR ILE GLU ALA ASP TYR SER LYS TYR SEQRES 9 A 234 ASP PHE GLU GLU LYS TYR ASP MET VAL VAL SER ALA LEU SEQRES 10 A 234 SER ILE HIS HIS LEU GLU ASP GLU ASP LYS LYS GLU LEU SEQRES 11 A 234 TYR LYS ARG SER TYR SER ILE LEU LYS GLU SER GLY ILE SEQRES 12 A 234 PHE ILE ASN ALA ASP LEU VAL HIS GLY GLU THR ALA PHE SEQRES 13 A 234 ILE GLU ASN LEU ASN LYS THR ILE TRP ARG GLN TYR VAL SEQRES 14 A 234 GLU ASN SER GLY LEU THR GLU GLU GLU ILE ALA ALA GLY SEQRES 15 A 234 TYR GLU ARG SER LYS LEU ASP LYS ASP ILE GLU MET ASN SEQRES 16 A 234 GLN GLN LEU ASN TRP LEU LYS GLU ALA GLY PHE ARG ASP SEQRES 17 A 234 VAL SER CYS ILE TYR LYS TYR TYR GLN PHE ALA VAL MET SEQRES 18 A 234 PHE GLY ARG LYS THR GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 234 MET SER LEU SER GLU ILE LYS ARG LYS PHE ASP ALA VAL SEQRES 2 B 234 SER GLY LYS TYR ASP GLU GLN ARG ARG LYS PHE ILE PRO SEQRES 3 B 234 CYS PHE ASP ASP PHE TYR GLY VAL SER VAL SER ILE ALA SEQRES 4 B 234 SER VAL ASP THR GLU ASN PRO ASP ILE LEU ASP LEU GLY SEQRES 5 B 234 ALA GLY THR GLY LEU LEU SER ALA PHE LEU MET GLU LYS SEQRES 6 B 234 TYR PRO GLU ALA THR PHE THR LEU VAL ASP MET SER GLU SEQRES 7 B 234 LYS MET LEU GLU ILE ALA LYS ASN ARG PHE ARG GLY ASN SEQRES 8 B 234 LEU LYS VAL LYS TYR ILE GLU ALA ASP TYR SER LYS TYR SEQRES 9 B 234 ASP PHE GLU GLU LYS TYR ASP MET VAL VAL SER ALA LEU SEQRES 10 B 234 SER ILE HIS HIS LEU GLU ASP GLU ASP LYS LYS GLU LEU SEQRES 11 B 234 TYR LYS ARG SER TYR SER ILE LEU LYS GLU SER GLY ILE SEQRES 12 B 234 PHE ILE ASN ALA ASP LEU VAL HIS GLY GLU THR ALA PHE SEQRES 13 B 234 ILE GLU ASN LEU ASN LYS THR ILE TRP ARG GLN TYR VAL SEQRES 14 B 234 GLU ASN SER GLY LEU THR GLU GLU GLU ILE ALA ALA GLY SEQRES 15 B 234 TYR GLU ARG SER LYS LEU ASP LYS ASP ILE GLU MET ASN SEQRES 16 B 234 GLN GLN LEU ASN TRP LEU LYS GLU ALA GLY PHE ARG ASP SEQRES 17 B 234 VAL SER CYS ILE TYR LYS TYR TYR GLN PHE ALA VAL MET SEQRES 18 B 234 PHE GLY ARG LYS THR GLU GLY HIS HIS HIS HIS HIS HIS HET CA A 233 1 HET ACT A 234 4 HET CA B 233 1 HET ACT B 234 4 HETNAM CA CALCIUM ION HETNAM ACT ACETATE ION FORMUL 3 CA 2(CA 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *135(H2 O) HELIX 1 1 ASP A 9 ILE A 23 1 15 HELIX 2 2 CYS A 25 ILE A 36 1 12 HELIX 3 3 GLY A 54 TYR A 64 1 11 HELIX 4 4 SER A 75 PHE A 86 1 12 HELIX 5 5 SER A 116 LEU A 120 5 5 HELIX 6 6 GLU A 121 ILE A 135 1 15 HELIX 7 7 THR A 152 ASN A 169 1 18 HELIX 8 8 THR A 173 ALA A 179 1 7 HELIX 9 9 GLU A 191 ALA A 202 1 12 HELIX 10 10 SER B 12 ILE B 23 1 12 HELIX 11 11 CYS B 25 ILE B 36 1 12 HELIX 12 12 GLY B 54 TYR B 64 1 11 HELIX 13 13 SER B 75 PHE B 86 1 12 HELIX 14 14 SER B 116 LEU B 120 5 5 HELIX 15 15 GLU B 121 ILE B 135 1 15 HELIX 16 16 THR B 152 ASN B 169 1 18 HELIX 17 17 THR B 173 SER B 184 1 12 HELIX 18 18 LYS B 185 ASP B 187 5 3 HELIX 19 19 GLU B 191 ALA B 202 1 12 SHEET 1 A14 VAL A 92 GLU A 96 0 SHEET 2 A14 THR A 68 ASP A 73 1 N PHE A 69 O LYS A 93 SHEET 3 A14 ASP A 45 LEU A 49 1 N ILE A 46 O THR A 68 SHEET 4 A14 TYR A 108 ALA A 114 1 O VAL A 112 N LEU A 47 SHEET 5 A14 LEU A 136 LEU A 147 1 O LYS A 137 N TYR A 108 SHEET 6 A14 PHE A 216 ARG A 222 -1 O ALA A 217 N ASP A 146 SHEET 7 A14 ARG A 205 TYR A 213 -1 N TYR A 211 O VAL A 218 SHEET 8 A14 ARG B 205 TYR B 213 -1 O LYS B 212 N LYS A 212 SHEET 9 A14 PHE B 216 LYS B 223 -1 O ARG B 222 N ARG B 205 SHEET 10 A14 LEU B 136 LEU B 147 -1 N GLY B 140 O LYS B 223 SHEET 11 A14 TYR B 108 ALA B 114 1 N TYR B 108 O LYS B 137 SHEET 12 A14 ASP B 45 LEU B 49 1 N LEU B 49 O VAL B 112 SHEET 13 A14 THR B 68 ASP B 73 1 O THR B 68 N ILE B 46 SHEET 14 A14 VAL B 92 GLU B 96 1 O LYS B 93 N PHE B 69 LINK OE2 GLU A 76 CA CA A 233 1555 1555 2.07 LINK OE1 GLU A 96 CA CA A 233 1555 1555 2.56 LINK OE2 GLU A 96 CA CA A 233 1555 1555 2.59 LINK CA CA A 233 O HOH A 277 1555 1555 2.37 LINK OE2 GLU B 76 CA CA B 233 1555 1555 2.05 LINK OE1 GLU B 96 CA CA B 233 1555 1555 2.58 LINK OE2 GLU B 96 CA CA B 233 1555 1555 2.60 LINK CA CA B 233 O HOH B 305 1555 1555 2.32 SITE 1 AC1 6 GLU A 76 GLU A 96 HOH A 277 HOH A 278 SITE 2 AC1 6 MET B 74 GLU B 96 SITE 1 AC2 4 PHE A 104 GLU A 105 GLU A 106 TYR A 108 SITE 1 AC3 6 MET A 74 GLU A 96 GLU B 76 GLU B 96 SITE 2 AC3 6 HOH B 305 HOH B 306 SITE 1 AC4 6 LYS B 93 ILE B 95 PHE B 104 GLU B 105 SITE 2 AC4 6 GLU B 106 TYR B 108 CRYST1 70.276 49.940 77.512 90.00 108.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014230 0.000000 0.004670 0.00000 SCALE2 0.000000 0.020024 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013578 0.00000