data_3DVW # _entry.id 3DVW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DVW pdb_00003dvw 10.2210/pdb3dvw/pdb RCSB RCSB048554 ? ? WWPDB D_1000048554 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DVW _pdbx_database_status.recvd_initial_deposition_date 2008-07-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3DVX _pdbx_database_related.details 'Crystal structure of reduced DsbA3 from Neisseria meningitidis' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lafaye, C.' 1 'Serre, L.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Biochemical and structural study of the homologues of the thiol-disulfide oxidoreductase DsbA in Neisseria meningitidis.' J.Mol.Biol. 392 952 966 2009 JMOBAK UK 0022-2836 0070 ? 19631659 10.1016/j.jmb.2009.07.056 1 'Preliminary crystallographic data of the three homologues of the thiol-disulfide oxidoreductase DsbA in Neisseria meningitidis.' 'Acta Crystallogr.,Sect.F' 64 111 114 2008 ? DK 1744-3091 ? ? 18259062 10.1107/S1744309108000754 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lafaye, C.' 1 ? primary 'Iwema, T.' 2 ? primary 'Carpentier, P.' 3 ? primary 'Jullian-Binard, C.' 4 ? primary 'Kroll, J.S.' 5 ? primary 'Collet, J.F.' 6 ? primary 'Serre, L.' 7 ? 1 'Lafaye, C.' 8 ? 1 'Iwema, T.' 9 ? 1 'Ferrer, J.L.' 10 ? 1 'Kroll, J.S.' 11 ? 1 'Griat, M.' 12 ? 1 'Serre, L.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thiol:disulfide interchange protein DsbA' 21510.436 1 ? ? 'Truncated mature form: UNP residues 41-232' ? 2 water nat water 18.015 178 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAV DMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIV GGKYKVEFADWESGMNTIDLLADKVREEQKAAQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAV DMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIV GGKYKVEFADWESGMNTIDLLADKVREEQKAAQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ALA n 1 4 GLY n 1 5 LEU n 1 6 VAL n 1 7 GLU n 1 8 GLY n 1 9 GLN n 1 10 ASN n 1 11 TYR n 1 12 THR n 1 13 VAL n 1 14 LEU n 1 15 ALA n 1 16 ASN n 1 17 PRO n 1 18 ILE n 1 19 PRO n 1 20 GLN n 1 21 GLN n 1 22 GLN n 1 23 ALA n 1 24 GLY n 1 25 LYS n 1 26 VAL n 1 27 GLU n 1 28 VAL n 1 29 LEU n 1 30 GLU n 1 31 PHE n 1 32 PHE n 1 33 GLY n 1 34 TYR n 1 35 PHE n 1 36 CYS n 1 37 PRO n 1 38 HIS n 1 39 CYS n 1 40 ALA n 1 41 HIS n 1 42 LEU n 1 43 GLU n 1 44 PRO n 1 45 VAL n 1 46 LEU n 1 47 SER n 1 48 LYS n 1 49 HIS n 1 50 ALA n 1 51 LYS n 1 52 SER n 1 53 PHE n 1 54 LYS n 1 55 ASP n 1 56 ASP n 1 57 MET n 1 58 TYR n 1 59 LEU n 1 60 ARG n 1 61 THR n 1 62 GLU n 1 63 HIS n 1 64 VAL n 1 65 VAL n 1 66 TRP n 1 67 GLN n 1 68 LYS n 1 69 GLU n 1 70 MET n 1 71 LEU n 1 72 THR n 1 73 LEU n 1 74 ALA n 1 75 ARG n 1 76 LEU n 1 77 ALA n 1 78 ALA n 1 79 ALA n 1 80 VAL n 1 81 ASP n 1 82 MET n 1 83 ALA n 1 84 ALA n 1 85 ALA n 1 86 ASP n 1 87 SER n 1 88 LYS n 1 89 ASP n 1 90 VAL n 1 91 ALA n 1 92 ASN n 1 93 SER n 1 94 HIS n 1 95 ILE n 1 96 PHE n 1 97 ASP n 1 98 ALA n 1 99 MET n 1 100 VAL n 1 101 ASN n 1 102 GLN n 1 103 LYS n 1 104 ILE n 1 105 LYS n 1 106 LEU n 1 107 GLN n 1 108 ASN n 1 109 PRO n 1 110 GLU n 1 111 VAL n 1 112 LEU n 1 113 LYS n 1 114 LYS n 1 115 TRP n 1 116 LEU n 1 117 GLY n 1 118 GLU n 1 119 GLN n 1 120 THR n 1 121 ALA n 1 122 PHE n 1 123 ASP n 1 124 GLY n 1 125 LYS n 1 126 LYS n 1 127 VAL n 1 128 LEU n 1 129 ALA n 1 130 ALA n 1 131 TYR n 1 132 GLU n 1 133 SER n 1 134 PRO n 1 135 GLU n 1 136 SER n 1 137 GLN n 1 138 ALA n 1 139 ARG n 1 140 ALA n 1 141 ASP n 1 142 LYS n 1 143 MET n 1 144 GLN n 1 145 GLU n 1 146 LEU n 1 147 THR n 1 148 GLU n 1 149 THR n 1 150 PHE n 1 151 GLN n 1 152 ILE n 1 153 ASP n 1 154 GLY n 1 155 THR n 1 156 PRO n 1 157 THR n 1 158 VAL n 1 159 ILE n 1 160 VAL n 1 161 GLY n 1 162 GLY n 1 163 LYS n 1 164 TYR n 1 165 LYS n 1 166 VAL n 1 167 GLU n 1 168 PHE n 1 169 ALA n 1 170 ASP n 1 171 TRP n 1 172 GLU n 1 173 SER n 1 174 GLY n 1 175 MET n 1 176 ASN n 1 177 THR n 1 178 ILE n 1 179 ASP n 1 180 LEU n 1 181 LEU n 1 182 ALA n 1 183 ASP n 1 184 LYS n 1 185 VAL n 1 186 ARG n 1 187 GLU n 1 188 GLU n 1 189 GLN n 1 190 LYS n 1 191 ALA n 1 192 ALA n 1 193 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dsbA-1, NMB0278' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'MC58 / Serogroup B' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Neisseria meningitidis MC58' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 122586 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-codon plus-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pLIM01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 22 ? ? ? A . n A 1 2 PRO 2 23 23 PRO PRO A . n A 1 3 ALA 3 24 24 ALA ALA A . n A 1 4 GLY 4 25 25 GLY GLY A . n A 1 5 LEU 5 26 26 LEU LEU A . n A 1 6 VAL 6 27 27 VAL VAL A . n A 1 7 GLU 7 28 28 GLU GLU A . n A 1 8 GLY 8 29 29 GLY GLY A . n A 1 9 GLN 9 30 30 GLN GLN A . n A 1 10 ASN 10 31 31 ASN ASN A . n A 1 11 TYR 11 32 32 TYR TYR A . n A 1 12 THR 12 33 33 THR THR A . n A 1 13 VAL 13 34 34 VAL VAL A . n A 1 14 LEU 14 35 35 LEU LEU A . n A 1 15 ALA 15 36 36 ALA ALA A . n A 1 16 ASN 16 37 37 ASN ASN A . n A 1 17 PRO 17 38 38 PRO PRO A . n A 1 18 ILE 18 39 39 ILE ILE A . n A 1 19 PRO 19 40 40 PRO PRO A . n A 1 20 GLN 20 41 41 GLN GLN A . n A 1 21 GLN 21 42 42 GLN GLN A . n A 1 22 GLN 22 43 43 GLN GLN A . n A 1 23 ALA 23 44 44 ALA ALA A . n A 1 24 GLY 24 45 45 GLY GLY A . n A 1 25 LYS 25 46 46 LYS LYS A . n A 1 26 VAL 26 47 47 VAL VAL A . n A 1 27 GLU 27 48 48 GLU GLU A . n A 1 28 VAL 28 49 49 VAL VAL A . n A 1 29 LEU 29 50 50 LEU LEU A . n A 1 30 GLU 30 51 51 GLU GLU A . n A 1 31 PHE 31 52 52 PHE PHE A . n A 1 32 PHE 32 53 53 PHE PHE A . n A 1 33 GLY 33 54 54 GLY GLY A . n A 1 34 TYR 34 55 55 TYR TYR A . n A 1 35 PHE 35 56 56 PHE PHE A . n A 1 36 CYS 36 57 57 CYS CYS A . n A 1 37 PRO 37 58 58 PRO PRO A . n A 1 38 HIS 38 59 59 HIS HIS A . n A 1 39 CYS 39 60 60 CYS CYS A . n A 1 40 ALA 40 61 61 ALA ALA A . n A 1 41 HIS 41 62 62 HIS HIS A . n A 1 42 LEU 42 63 63 LEU LEU A . n A 1 43 GLU 43 64 64 GLU GLU A . n A 1 44 PRO 44 65 65 PRO PRO A . n A 1 45 VAL 45 66 66 VAL VAL A . n A 1 46 LEU 46 67 67 LEU LEU A . n A 1 47 SER 47 68 68 SER SER A . n A 1 48 LYS 48 69 69 LYS LYS A . n A 1 49 HIS 49 70 70 HIS HIS A . n A 1 50 ALA 50 71 71 ALA ALA A . n A 1 51 LYS 51 72 72 LYS LYS A . n A 1 52 SER 52 73 73 SER SER A . n A 1 53 PHE 53 74 74 PHE PHE A . n A 1 54 LYS 54 75 75 LYS LYS A . n A 1 55 ASP 55 76 76 ASP ASP A . n A 1 56 ASP 56 77 77 ASP ASP A . n A 1 57 MET 57 78 78 MET MET A . n A 1 58 TYR 58 79 79 TYR TYR A . n A 1 59 LEU 59 80 80 LEU LEU A . n A 1 60 ARG 60 81 81 ARG ARG A . n A 1 61 THR 61 82 82 THR THR A . n A 1 62 GLU 62 83 83 GLU GLU A . n A 1 63 HIS 63 84 84 HIS HIS A . n A 1 64 VAL 64 85 85 VAL VAL A . n A 1 65 VAL 65 86 86 VAL VAL A . n A 1 66 TRP 66 87 87 TRP TRP A . n A 1 67 GLN 67 88 88 GLN GLN A . n A 1 68 LYS 68 89 89 LYS LYS A . n A 1 69 GLU 69 90 90 GLU GLU A . n A 1 70 MET 70 91 91 MET MET A . n A 1 71 LEU 71 92 92 LEU LEU A . n A 1 72 THR 72 93 93 THR THR A . n A 1 73 LEU 73 94 94 LEU LEU A . n A 1 74 ALA 74 95 95 ALA ALA A . n A 1 75 ARG 75 96 96 ARG ARG A . n A 1 76 LEU 76 97 97 LEU LEU A . n A 1 77 ALA 77 98 98 ALA ALA A . n A 1 78 ALA 78 99 99 ALA ALA A . n A 1 79 ALA 79 100 100 ALA ALA A . n A 1 80 VAL 80 101 101 VAL VAL A . n A 1 81 ASP 81 102 102 ASP ASP A . n A 1 82 MET 82 103 103 MET MET A . n A 1 83 ALA 83 104 104 ALA ALA A . n A 1 84 ALA 84 105 105 ALA ALA A . n A 1 85 ALA 85 106 106 ALA ALA A . n A 1 86 ASP 86 107 107 ASP ASP A . n A 1 87 SER 87 108 108 SER SER A . n A 1 88 LYS 88 109 109 LYS LYS A . n A 1 89 ASP 89 110 110 ASP ASP A . n A 1 90 VAL 90 111 111 VAL VAL A . n A 1 91 ALA 91 112 112 ALA ALA A . n A 1 92 ASN 92 113 113 ASN ASN A . n A 1 93 SER 93 114 114 SER SER A . n A 1 94 HIS 94 115 115 HIS HIS A . n A 1 95 ILE 95 116 116 ILE ILE A . n A 1 96 PHE 96 117 117 PHE PHE A . n A 1 97 ASP 97 118 118 ASP ASP A . n A 1 98 ALA 98 119 119 ALA ALA A . n A 1 99 MET 99 120 120 MET MET A . n A 1 100 VAL 100 121 121 VAL VAL A . n A 1 101 ASN 101 122 122 ASN ASN A . n A 1 102 GLN 102 123 123 GLN GLN A . n A 1 103 LYS 103 124 124 LYS LYS A . n A 1 104 ILE 104 125 125 ILE ILE A . n A 1 105 LYS 105 126 126 LYS LYS A . n A 1 106 LEU 106 127 127 LEU LEU A . n A 1 107 GLN 107 128 128 GLN GLN A . n A 1 108 ASN 108 129 129 ASN ASN A . n A 1 109 PRO 109 130 130 PRO PRO A . n A 1 110 GLU 110 131 131 GLU GLU A . n A 1 111 VAL 111 132 132 VAL VAL A . n A 1 112 LEU 112 133 133 LEU LEU A . n A 1 113 LYS 113 134 134 LYS LYS A . n A 1 114 LYS 114 135 135 LYS LYS A . n A 1 115 TRP 115 136 136 TRP TRP A . n A 1 116 LEU 116 137 137 LEU LEU A . n A 1 117 GLY 117 138 138 GLY GLY A . n A 1 118 GLU 118 139 139 GLU GLU A . n A 1 119 GLN 119 140 140 GLN GLN A . n A 1 120 THR 120 141 141 THR THR A . n A 1 121 ALA 121 142 142 ALA ALA A . n A 1 122 PHE 122 143 143 PHE PHE A . n A 1 123 ASP 123 144 144 ASP ASP A . n A 1 124 GLY 124 145 145 GLY GLY A . n A 1 125 LYS 125 146 146 LYS LYS A . n A 1 126 LYS 126 147 147 LYS LYS A . n A 1 127 VAL 127 148 148 VAL VAL A . n A 1 128 LEU 128 149 149 LEU LEU A . n A 1 129 ALA 129 150 150 ALA ALA A . n A 1 130 ALA 130 151 151 ALA ALA A . n A 1 131 TYR 131 152 152 TYR TYR A . n A 1 132 GLU 132 153 153 GLU GLU A . n A 1 133 SER 133 154 154 SER SER A . n A 1 134 PRO 134 155 155 PRO PRO A . n A 1 135 GLU 135 156 156 GLU GLU A . n A 1 136 SER 136 157 157 SER SER A . n A 1 137 GLN 137 158 158 GLN GLN A . n A 1 138 ALA 138 159 159 ALA ALA A . n A 1 139 ARG 139 160 160 ARG ARG A . n A 1 140 ALA 140 161 161 ALA ALA A . n A 1 141 ASP 141 162 162 ASP ASP A . n A 1 142 LYS 142 163 163 LYS LYS A . n A 1 143 MET 143 164 164 MET MET A . n A 1 144 GLN 144 165 165 GLN GLN A . n A 1 145 GLU 145 166 166 GLU GLU A . n A 1 146 LEU 146 167 167 LEU LEU A . n A 1 147 THR 147 168 168 THR THR A . n A 1 148 GLU 148 169 169 GLU GLU A . n A 1 149 THR 149 170 170 THR THR A . n A 1 150 PHE 150 171 171 PHE PHE A . n A 1 151 GLN 151 172 172 GLN GLN A . n A 1 152 ILE 152 173 173 ILE ILE A . n A 1 153 ASP 153 174 174 ASP ASP A . n A 1 154 GLY 154 175 175 GLY GLY A . n A 1 155 THR 155 176 176 THR THR A . n A 1 156 PRO 156 177 177 PRO PRO A . n A 1 157 THR 157 178 178 THR THR A . n A 1 158 VAL 158 179 179 VAL VAL A . n A 1 159 ILE 159 180 180 ILE ILE A . n A 1 160 VAL 160 181 181 VAL VAL A . n A 1 161 GLY 161 182 182 GLY GLY A . n A 1 162 GLY 162 183 183 GLY GLY A . n A 1 163 LYS 163 184 184 LYS LYS A . n A 1 164 TYR 164 185 185 TYR TYR A . n A 1 165 LYS 165 186 186 LYS LYS A . n A 1 166 VAL 166 187 187 VAL VAL A . n A 1 167 GLU 167 188 188 GLU GLU A . n A 1 168 PHE 168 189 189 PHE PHE A . n A 1 169 ALA 169 190 190 ALA ALA A . n A 1 170 ASP 170 191 191 ASP ASP A . n A 1 171 TRP 171 192 192 TRP TRP A . n A 1 172 GLU 172 193 193 GLU GLU A . n A 1 173 SER 173 194 194 SER SER A . n A 1 174 GLY 174 195 195 GLY GLY A . n A 1 175 MET 175 196 196 MET MET A . n A 1 176 ASN 176 197 197 ASN ASN A . n A 1 177 THR 177 198 198 THR THR A . n A 1 178 ILE 178 199 199 ILE ILE A . n A 1 179 ASP 179 200 200 ASP ASP A . n A 1 180 LEU 180 201 201 LEU LEU A . n A 1 181 LEU 181 202 202 LEU LEU A . n A 1 182 ALA 182 203 203 ALA ALA A . n A 1 183 ASP 183 204 204 ASP ASP A . n A 1 184 LYS 184 205 205 LYS LYS A . n A 1 185 VAL 185 206 206 VAL VAL A . n A 1 186 ARG 186 207 207 ARG ARG A . n A 1 187 GLU 187 208 208 GLU GLU A . n A 1 188 GLU 188 209 209 GLU GLU A . n A 1 189 GLN 189 210 210 GLN GLN A . n A 1 190 LYS 190 211 211 LYS LYS A . n A 1 191 ALA 191 212 212 ALA ALA A . n A 1 192 ALA 192 213 213 ALA ALA A . n A 1 193 GLN 193 214 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 215 1 HOH HOH A . B 2 HOH 2 216 2 HOH HOH A . B 2 HOH 3 217 3 HOH HOH A . B 2 HOH 4 218 4 HOH HOH A . B 2 HOH 5 219 5 HOH HOH A . B 2 HOH 6 220 6 HOH HOH A . B 2 HOH 7 221 7 HOH HOH A . B 2 HOH 8 222 8 HOH HOH A . B 2 HOH 9 223 9 HOH HOH A . B 2 HOH 10 224 10 HOH HOH A . B 2 HOH 11 225 11 HOH HOH A . B 2 HOH 12 226 12 HOH HOH A . B 2 HOH 13 227 13 HOH HOH A . B 2 HOH 14 228 14 HOH HOH A . B 2 HOH 15 229 15 HOH HOH A . B 2 HOH 16 230 16 HOH HOH A . B 2 HOH 17 231 17 HOH HOH A . B 2 HOH 18 232 18 HOH HOH A . B 2 HOH 19 233 19 HOH HOH A . B 2 HOH 20 234 20 HOH HOH A . B 2 HOH 21 235 21 HOH HOH A . B 2 HOH 22 236 22 HOH HOH A . B 2 HOH 23 237 23 HOH HOH A . B 2 HOH 24 238 24 HOH HOH A . B 2 HOH 25 239 25 HOH HOH A . B 2 HOH 26 240 26 HOH HOH A . B 2 HOH 27 241 27 HOH HOH A . B 2 HOH 28 242 28 HOH HOH A . B 2 HOH 29 243 29 HOH HOH A . B 2 HOH 30 244 30 HOH HOH A . B 2 HOH 31 245 31 HOH HOH A . B 2 HOH 32 246 32 HOH HOH A . B 2 HOH 33 247 33 HOH HOH A . B 2 HOH 34 248 34 HOH HOH A . B 2 HOH 35 249 35 HOH HOH A . B 2 HOH 36 250 36 HOH HOH A . B 2 HOH 37 251 37 HOH HOH A . B 2 HOH 38 252 38 HOH HOH A . B 2 HOH 39 253 39 HOH HOH A . B 2 HOH 40 254 40 HOH HOH A . B 2 HOH 41 255 41 HOH HOH A . B 2 HOH 42 256 42 HOH HOH A . B 2 HOH 43 257 43 HOH HOH A . B 2 HOH 44 258 44 HOH HOH A . B 2 HOH 45 259 45 HOH HOH A . B 2 HOH 46 260 46 HOH HOH A . B 2 HOH 47 261 47 HOH HOH A . B 2 HOH 48 262 48 HOH HOH A . B 2 HOH 49 263 49 HOH HOH A . B 2 HOH 50 264 50 HOH HOH A . B 2 HOH 51 265 51 HOH HOH A . B 2 HOH 52 266 52 HOH HOH A . B 2 HOH 53 267 53 HOH HOH A . B 2 HOH 54 268 54 HOH HOH A . B 2 HOH 55 269 55 HOH HOH A . B 2 HOH 56 270 56 HOH HOH A . B 2 HOH 57 271 57 HOH HOH A . B 2 HOH 58 272 58 HOH HOH A . B 2 HOH 59 273 59 HOH HOH A . B 2 HOH 60 274 60 HOH HOH A . B 2 HOH 61 275 61 HOH HOH A . B 2 HOH 62 276 62 HOH HOH A . B 2 HOH 63 277 63 HOH HOH A . B 2 HOH 64 278 64 HOH HOH A . B 2 HOH 65 279 65 HOH HOH A . B 2 HOH 66 280 66 HOH HOH A . B 2 HOH 67 281 67 HOH HOH A . B 2 HOH 68 282 68 HOH HOH A . B 2 HOH 69 283 69 HOH HOH A . B 2 HOH 70 284 70 HOH HOH A . B 2 HOH 71 285 71 HOH HOH A . B 2 HOH 72 286 72 HOH HOH A . B 2 HOH 73 287 73 HOH HOH A . B 2 HOH 74 288 74 HOH HOH A . B 2 HOH 75 289 75 HOH HOH A . B 2 HOH 76 290 76 HOH HOH A . B 2 HOH 77 291 77 HOH HOH A . B 2 HOH 78 292 78 HOH HOH A . B 2 HOH 79 293 79 HOH HOH A . B 2 HOH 80 294 80 HOH HOH A . B 2 HOH 81 295 81 HOH HOH A . B 2 HOH 82 296 82 HOH HOH A . B 2 HOH 83 297 83 HOH HOH A . B 2 HOH 84 298 84 HOH HOH A . B 2 HOH 85 299 85 HOH HOH A . B 2 HOH 86 300 86 HOH HOH A . B 2 HOH 87 301 87 HOH HOH A . B 2 HOH 88 302 88 HOH HOH A . B 2 HOH 89 303 89 HOH HOH A . B 2 HOH 90 304 90 HOH HOH A . B 2 HOH 91 305 91 HOH HOH A . B 2 HOH 92 306 92 HOH HOH A . B 2 HOH 93 307 93 HOH HOH A . B 2 HOH 94 308 94 HOH HOH A . B 2 HOH 95 309 95 HOH HOH A . B 2 HOH 96 310 96 HOH HOH A . B 2 HOH 97 311 97 HOH HOH A . B 2 HOH 98 312 98 HOH HOH A . B 2 HOH 99 313 99 HOH HOH A . B 2 HOH 100 314 100 HOH HOH A . B 2 HOH 101 315 101 HOH HOH A . B 2 HOH 102 316 102 HOH HOH A . B 2 HOH 103 317 103 HOH HOH A . B 2 HOH 104 318 104 HOH HOH A . B 2 HOH 105 319 105 HOH HOH A . B 2 HOH 106 320 106 HOH HOH A . B 2 HOH 107 321 107 HOH HOH A . B 2 HOH 108 322 108 HOH HOH A . B 2 HOH 109 323 109 HOH HOH A . B 2 HOH 110 324 110 HOH HOH A . B 2 HOH 111 325 111 HOH HOH A . B 2 HOH 112 326 112 HOH HOH A . B 2 HOH 113 327 113 HOH HOH A . B 2 HOH 114 328 114 HOH HOH A . B 2 HOH 115 329 115 HOH HOH A . B 2 HOH 116 330 116 HOH HOH A . B 2 HOH 117 331 117 HOH HOH A . B 2 HOH 118 332 118 HOH HOH A . B 2 HOH 119 333 119 HOH HOH A . B 2 HOH 120 334 120 HOH HOH A . B 2 HOH 121 335 121 HOH HOH A . B 2 HOH 122 336 122 HOH HOH A . B 2 HOH 123 337 123 HOH HOH A . B 2 HOH 124 338 124 HOH HOH A . B 2 HOH 125 339 125 HOH HOH A . B 2 HOH 126 340 126 HOH HOH A . B 2 HOH 127 341 127 HOH HOH A . B 2 HOH 128 342 128 HOH HOH A . B 2 HOH 129 343 129 HOH HOH A . B 2 HOH 130 344 130 HOH HOH A . B 2 HOH 131 345 131 HOH HOH A . B 2 HOH 132 346 132 HOH HOH A . B 2 HOH 133 347 133 HOH HOH A . B 2 HOH 134 348 134 HOH HOH A . B 2 HOH 135 349 135 HOH HOH A . B 2 HOH 136 350 136 HOH HOH A . B 2 HOH 137 351 137 HOH HOH A . B 2 HOH 138 352 138 HOH HOH A . B 2 HOH 139 353 139 HOH HOH A . B 2 HOH 140 354 140 HOH HOH A . B 2 HOH 141 355 141 HOH HOH A . B 2 HOH 142 356 142 HOH HOH A . B 2 HOH 143 357 143 HOH HOH A . B 2 HOH 144 359 145 HOH HOH A . B 2 HOH 145 360 146 HOH HOH A . B 2 HOH 146 361 147 HOH HOH A . B 2 HOH 147 362 148 HOH HOH A . B 2 HOH 148 363 149 HOH HOH A . B 2 HOH 149 364 150 HOH HOH A . B 2 HOH 150 365 151 HOH HOH A . B 2 HOH 151 366 152 HOH HOH A . B 2 HOH 152 367 153 HOH HOH A . B 2 HOH 153 368 154 HOH HOH A . B 2 HOH 154 369 155 HOH HOH A . B 2 HOH 155 370 156 HOH HOH A . B 2 HOH 156 371 157 HOH HOH A . B 2 HOH 157 372 158 HOH HOH A . B 2 HOH 158 373 159 HOH HOH A . B 2 HOH 159 374 160 HOH HOH A . B 2 HOH 160 375 161 HOH HOH A . B 2 HOH 161 376 162 HOH HOH A . B 2 HOH 162 377 163 HOH HOH A . B 2 HOH 163 378 164 HOH HOH A . B 2 HOH 164 379 165 HOH HOH A . B 2 HOH 165 380 166 HOH HOH A . B 2 HOH 166 381 167 HOH HOH A . B 2 HOH 167 382 168 HOH HOH A . B 2 HOH 168 383 169 HOH HOH A . B 2 HOH 169 384 170 HOH HOH A . B 2 HOH 170 385 171 HOH HOH A . B 2 HOH 171 386 172 HOH HOH A . B 2 HOH 172 387 173 HOH HOH A . B 2 HOH 173 388 174 HOH HOH A . B 2 HOH 174 389 175 HOH HOH A . B 2 HOH 175 390 176 HOH HOH A . B 2 HOH 176 391 177 HOH HOH A . B 2 HOH 177 392 178 HOH HOH A . B 2 HOH 178 393 179 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 XNEMO 'data collection' . ? 2 MOSFLM 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 SHARP phasing . ? 5 # _cell.entry_id 3DVW _cell.length_a 44.080 _cell.length_b 46.418 _cell.length_c 79.930 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DVW _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3DVW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_percent_sol 35.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 9.0 _exptl_crystal_grow.pdbx_details '2.4 M Ammonium sulfate, 0.1 M Bicine pH 9.0 or 1.6 M Trisodium citrate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'Mirrors, horizontal focusing by sagitally curved 2nd crystal' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97900 # _reflns.entry_id 3DVW _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 46.0 _reflns.number_all ? _reflns.number_obs 26907 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.064 _reflns.pdbx_netI_over_sigmaI 6.8 _reflns.B_iso_Wilson_estimate 17.4 _reflns.pdbx_redundancy 10.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 97.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.241 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3DVW _refine.ls_number_reflns_obs 25466 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.54 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.45 _refine.ls_R_factor_obs 0.18148 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18148 _refine.ls_R_factor_R_free 0.21064 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1342 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 12.808 _refine.aniso_B[1][1] -0.07 _refine.aniso_B[2][2] 0.02 _refine.aniso_B[3][3] 0.05 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.083 _refine.pdbx_overall_ESU_R_Free 0.083 _refine.overall_SU_ML 0.048 _refine.overall_SU_B 1.247 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1532 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 1711 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 20.54 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1570 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1053 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.214 1.949 ? 2133 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.854 3.000 ? 2600 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.515 5.000 ? 202 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.808 25.890 ? 73 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.921 15.000 ? 282 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.014 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.069 0.200 ? 237 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1756 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 293 'X-RAY DIFFRACTION' ? r_nbd_refined 0.207 0.200 ? 321 'X-RAY DIFFRACTION' ? r_nbd_other 0.183 0.200 ? 1089 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.177 0.200 ? 782 'X-RAY DIFFRACTION' ? r_nbtor_other 0.086 0.200 ? 727 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.142 0.200 ? 113 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.189 0.200 ? 12 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.222 0.200 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.088 0.200 ? 26 'X-RAY DIFFRACTION' ? r_mcbond_it 0.933 1.500 ? 1272 'X-RAY DIFFRACTION' ? r_mcbond_other 0.165 1.500 ? 393 'X-RAY DIFFRACTION' ? r_mcangle_it 1.107 2.000 ? 1570 'X-RAY DIFFRACTION' ? r_scbond_it 1.990 3.000 ? 700 'X-RAY DIFFRACTION' ? r_scangle_it 2.838 4.500 ? 558 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 1762 _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.percent_reflns_obs 95.34 _refine_ls_shell.R_factor_R_free 0.258 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 100 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3DVW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3DVW _struct.title 'Crystal structure of reduced DsbA1 from Neisseria meningitidis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DVW _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'thiol-oxidoreductase, neisseria, DsbA, disulfide bond, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9K189_NEIMB _struct_ref.pdbx_db_accession Q9K189 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVD MAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVG GKYKVEFADWESGMNTIDLLADKVREEQKAAQ ; _struct_ref.pdbx_align_begin 41 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DVW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9K189 _struct_ref_seq.db_align_beg 41 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 232 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 23 _struct_ref_seq.pdbx_auth_seq_align_end 214 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3DVW _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9K189 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 22 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 36 ? LYS A 51 ? CYS A 57 LYS A 72 1 ? 16 HELX_P HELX_P2 2 GLN A 67 ? GLU A 69 ? GLN A 88 GLU A 90 5 ? 3 HELX_P HELX_P3 3 MET A 70 ? ALA A 84 ? MET A 91 ALA A 105 1 ? 15 HELX_P HELX_P4 4 SER A 87 ? ASN A 101 ? SER A 108 ASN A 122 1 ? 15 HELX_P HELX_P5 5 ASN A 108 ? GLU A 118 ? ASN A 129 GLU A 139 1 ? 11 HELX_P HELX_P6 6 ASP A 123 ? SER A 133 ? ASP A 144 SER A 154 1 ? 11 HELX_P HELX_P7 7 SER A 133 ? PHE A 150 ? SER A 154 PHE A 171 1 ? 18 HELX_P HELX_P8 8 ASP A 170 ? ALA A 192 ? ASP A 191 ALA A 213 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 155 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 176 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 156 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 177 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.64 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 11 ? VAL A 13 ? TYR A 32 VAL A 34 A 2 TYR A 164 ? VAL A 166 ? TYR A 185 VAL A 187 A 3 THR A 157 ? VAL A 160 ? THR A 178 VAL A 181 A 4 VAL A 26 ? PHE A 32 ? VAL A 47 PHE A 53 A 5 MET A 57 ? HIS A 63 ? MET A 78 HIS A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 12 ? N THR A 33 O LYS A 165 ? O LYS A 186 A 2 3 O TYR A 164 ? O TYR A 185 N VAL A 160 ? N VAL A 181 A 3 4 O ILE A 159 ? O ILE A 180 N LEU A 29 ? N LEU A 50 A 4 5 N VAL A 28 ? N VAL A 49 O ARG A 60 ? O ARG A 81 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 106 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 51.75 _pdbx_validate_torsion.psi -124.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 22 ? A GLY 1 2 1 Y 1 A GLN 214 ? A GLN 193 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3DVW _atom_sites.fract_transf_matrix[1][1] 0.022686 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021543 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012511 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_