HEADER SIGNALING PROTEIN 17-AUG-08 3E6Y TITLE STRUCTURE OF 14-3-3 IN COMPLEX WITH THE DIFFERENTIATION-INDUCING AGENT TITLE 2 COTYLENIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3-LIKE PROTEIN C; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 14-3-3-LIKE PROTEIN B; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: H+-ATPASE PHOSPHOPEPTIDE QSYPTV; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: AMERICAN TOBACCO,TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. IT IS FOUND SOURCE 10 NATURALLY IN ARABIDOPSIS THALIANA KEYWDS ADAPTER PROTEIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.OTTMANN,M.WEYAND,A.WITTINGHOFER,C.OECKING REVDAT 5 30-AUG-23 3E6Y 1 REMARK LINK REVDAT 4 25-OCT-17 3E6Y 1 REMARK REVDAT 3 13-JUL-11 3E6Y 1 VERSN REVDAT 2 17-MAR-09 3E6Y 1 JRNL REVDAT 1 10-MAR-09 3E6Y 0 JRNL AUTH C.OTTMANN,M.WEYAND,T.SASSA,T.INOUE,N.KATO,A.WITTINGHOFER, JRNL AUTH 2 C.OECKING JRNL TITL A STRUCTURAL RATIONALE FOR SELECTIVE STABILIZATION OF JRNL TITL 2 ANTI-TUMOR INTERACTIONS OF 14-3-3 PROTEINS BY COTYLENIN A JRNL REF J.MOL.BIOL. V. 386 913 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19244612 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0035 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 930 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1285 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3733 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 100 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 49.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : -0.25000 REMARK 3 B33 (A**2) : 0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.31000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.705 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.342 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.298 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.977 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.873 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3891 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5287 ; 2.074 ; 2.011 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 471 ; 6.041 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;39.928 ;24.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 662 ;20.718 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;18.600 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 608 ; 0.170 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2869 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2371 ; 0.612 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3784 ; 1.154 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1520 ; 2.071 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1503 ; 3.203 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 238 REMARK 3 ORIGIN FOR THE GROUP (A): -8.6761 -12.8679 -12.8394 REMARK 3 T TENSOR REMARK 3 T11: 0.0463 T22: 0.1304 REMARK 3 T33: 0.1679 T12: -0.0659 REMARK 3 T13: 0.0262 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 2.3401 L22: 2.5359 REMARK 3 L33: 2.4507 L12: -0.4086 REMARK 3 L13: 0.4617 L23: -0.8110 REMARK 3 S TENSOR REMARK 3 S11: -0.0810 S12: 0.2444 S13: 0.5181 REMARK 3 S21: 0.0667 S22: 0.0339 S23: 0.0546 REMARK 3 S31: -0.1435 S32: 0.1708 S33: 0.0471 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 240 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7418 -49.2434 -10.0365 REMARK 3 T TENSOR REMARK 3 T11: 0.1561 T22: 0.1464 REMARK 3 T33: 0.3151 T12: 0.1036 REMARK 3 T13: -0.0733 T23: -0.0952 REMARK 3 L TENSOR REMARK 3 L11: 2.6049 L22: 2.6354 REMARK 3 L33: 2.4953 L12: 0.3746 REMARK 3 L13: 0.2195 L23: -0.8657 REMARK 3 S TENSOR REMARK 3 S11: 0.1708 S12: 0.0858 S13: -0.8006 REMARK 3 S21: -0.0647 S22: -0.0150 S23: 0.1192 REMARK 3 S31: 0.3483 S32: 0.1039 S33: -0.1558 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 5 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9255 -14.9443 -9.4340 REMARK 3 T TENSOR REMARK 3 T11: 0.1641 T22: 0.2850 REMARK 3 T33: 0.3864 T12: -0.0015 REMARK 3 T13: 0.0980 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 15.1146 L22: 11.1104 REMARK 3 L33: 15.1899 L12: 2.1936 REMARK 3 L13: 14.1128 L23: 6.7082 REMARK 3 S TENSOR REMARK 3 S11: 0.3584 S12: -1.0261 S13: -0.3970 REMARK 3 S21: 0.6049 S22: -0.5078 S23: 1.2058 REMARK 3 S31: 0.5908 S32: -1.1027 S33: 0.1494 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 5 REMARK 3 ORIGIN FOR THE GROUP (A): -16.5687 -47.7669 -13.9489 REMARK 3 T TENSOR REMARK 3 T11: 0.3836 T22: 0.2332 REMARK 3 T33: 0.4556 T12: 0.0146 REMARK 3 T13: -0.0783 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 12.4669 L22: 5.6395 REMARK 3 L33: 5.9565 L12: 4.1957 REMARK 3 L13: -5.5112 L23: 1.9935 REMARK 3 S TENSOR REMARK 3 S11: -0.0469 S12: 0.8726 S13: 0.9043 REMARK 3 S21: -0.6128 S22: 0.3695 S23: 0.4809 REMARK 3 S31: -0.4992 S32: -0.2817 S33: -0.3227 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3E6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000048952. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18639 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.720 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.03800 REMARK 200 FOR THE DATA SET : 28.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.21400 REMARK 200 R SYM FOR SHELL (I) : 0.23300 REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1O9C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA CITRATE, 24% PEG 4000, 6% REMARK 280 ISOPROPANOL, 5 MM MGCL2, 2 MM DTT, PH 6.1, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 70.95000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 ALA A 4 REMARK 465 SER A 239 REMARK 465 ASP A 240 REMARK 465 MET A 241 REMARK 465 GLN A 242 REMARK 465 ASP A 243 REMARK 465 ASP A 244 REMARK 465 GLY A 245 REMARK 465 ALA A 246 REMARK 465 ASP A 247 REMARK 465 GLU A 248 REMARK 465 ILE A 249 REMARK 465 LYS A 250 REMARK 465 GLU A 251 REMARK 465 ASP A 252 REMARK 465 PRO A 253 REMARK 465 LYS A 254 REMARK 465 PRO A 255 REMARK 465 ASP A 256 REMARK 465 GLU A 257 REMARK 465 ALA A 258 REMARK 465 LYS A 259 REMARK 465 ASN A 260 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 VAL B 3 REMARK 465 LEU B 212 REMARK 465 ASP B 213 REMARK 465 THR B 214 REMARK 465 LEU B 215 REMARK 465 GLY B 216 REMARK 465 MET B 241 REMARK 465 GLN B 242 REMARK 465 ASP B 243 REMARK 465 ASP B 244 REMARK 465 GLY B 245 REMARK 465 ALA B 246 REMARK 465 ASP B 247 REMARK 465 GLU B 248 REMARK 465 ILE B 249 REMARK 465 LYS B 250 REMARK 465 GLU B 251 REMARK 465 ASP B 252 REMARK 465 PRO B 253 REMARK 465 LYS B 254 REMARK 465 PRO B 255 REMARK 465 ASP B 256 REMARK 465 GLU B 257 REMARK 465 ALA B 258 REMARK 465 LYS B 259 REMARK 465 ASN B 260 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 101 CD CE NZ REMARK 470 LYS A 108 CE NZ REMARK 470 LYS A 113 CE NZ REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 LYS A 159 CE NZ REMARK 470 LYS A 202 CE NZ REMARK 470 ASP A 213 CG OD1 OD2 REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 LYS B 33 NZ REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 ARG B 79 CD NE CZ NH1 NH2 REMARK 470 GLU B 83 CG CD OE1 OE2 REMARK 470 LYS B 101 NZ REMARK 470 LYS B 108 NZ REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 GLU B 152 CG CD OE1 OE2 REMARK 470 ASN B 199 CG OD1 ND2 REMARK 470 LEU B 200 CG CD1 CD2 REMARK 470 LYS B 202 CG CD CE NZ REMARK 470 GLN B 203 CG CD OE1 NE2 REMARK 470 GLU B 211 CG CD OE1 OE2 REMARK 470 LYS B 221 CG CD CE NZ REMARK 470 LEU B 236 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 52 O HOH B 275 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 38 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 LEU A 110 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 LEU B 110 CA - CB - CG ANGL. DEV. = 13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 6 160.20 92.55 REMARK 500 SER A 37 39.06 -92.95 REMARK 500 LEU A 38 -61.63 -103.26 REMARK 500 THR B 6 -176.82 -60.79 REMARK 500 ASN B 36 38.22 -89.01 REMARK 500 LEU B 38 -161.40 -74.79 REMARK 500 ASP B 122 -70.37 -57.17 REMARK 500 ASN B 192 17.66 56.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CW1 A 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CW1 B 261 DBREF 3E6Y A 1 260 UNP P93343 1433C_TOBAC 1 260 DBREF 3E6Y B 1 260 UNP P93343 1433C_TOBAC 1 260 DBREF 3E6Y C 1 5 PDB 3E6Y 3E6Y 1 5 DBREF 3E6Y D 1 5 PDB 3E6Y 3E6Y 1 5 SEQRES 1 A 260 MET ALA VAL ALA PRO THR ALA ARG GLU GLU ASN VAL TYR SEQRES 2 A 260 MET ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU GLU SEQRES 3 A 260 MET VAL GLU PHE MET GLU LYS VAL SER ASN SER LEU GLY SEQRES 4 A 260 SER GLU GLU LEU THR VAL GLU GLU ARG ASN LEU LEU SER SEQRES 5 A 260 VAL ALA TYR LYS ASN VAL ILE GLY ALA ARG ARG ALA SER SEQRES 6 A 260 TRP ARG ILE ILE SER SER ILE GLU GLN LYS GLU GLU SER SEQRES 7 A 260 ARG GLY ASN GLU GLU HIS VAL ASN SER ILE ARG GLU TYR SEQRES 8 A 260 ARG SER LYS ILE GLU ASN GLU LEU SER LYS ILE CYS ASP SEQRES 9 A 260 GLY ILE LEU LYS LEU LEU ASP ALA LYS LEU ILE PRO SER SEQRES 10 A 260 ALA ALA SER GLY ASP SER LYS VAL PHE TYR LEU LYS MET SEQRES 11 A 260 LYS GLY ASP TYR HIS ARG TYR LEU ALA GLU PHE LYS THR SEQRES 12 A 260 GLY ALA GLU ARG LYS GLU ALA ALA GLU SER THR LEU THR SEQRES 13 A 260 ALA TYR LYS ALA ALA GLN ASP ILE ALA THR THR GLU LEU SEQRES 14 A 260 ALA PRO THR HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN SEQRES 15 A 260 PHE SER VAL PHE TYR TYR GLU ILE LEU ASN SER PRO ASP SEQRES 16 A 260 ARG ALA CYS ASN LEU ALA LYS GLN ALA PHE ASP GLU ALA SEQRES 17 A 260 ILE ALA GLU LEU ASP THR LEU GLY GLU GLU SER TYR LYS SEQRES 18 A 260 ASP SER THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU SEQRES 19 A 260 THR LEU TRP THR SER ASP MET GLN ASP ASP GLY ALA ASP SEQRES 20 A 260 GLU ILE LYS GLU ASP PRO LYS PRO ASP GLU ALA LYS ASN SEQRES 1 B 260 MET ALA VAL ALA PRO THR ALA ARG GLU GLU ASN VAL TYR SEQRES 2 B 260 MET ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR GLU GLU SEQRES 3 B 260 MET VAL GLU PHE MET GLU LYS VAL SER ASN SER LEU GLY SEQRES 4 B 260 SER GLU GLU LEU THR VAL GLU GLU ARG ASN LEU LEU SER SEQRES 5 B 260 VAL ALA TYR LYS ASN VAL ILE GLY ALA ARG ARG ALA SER SEQRES 6 B 260 TRP ARG ILE ILE SER SER ILE GLU GLN LYS GLU GLU SER SEQRES 7 B 260 ARG GLY ASN GLU GLU HIS VAL ASN SER ILE ARG GLU TYR SEQRES 8 B 260 ARG SER LYS ILE GLU ASN GLU LEU SER LYS ILE CYS ASP SEQRES 9 B 260 GLY ILE LEU LYS LEU LEU ASP ALA LYS LEU ILE PRO SER SEQRES 10 B 260 ALA ALA SER GLY ASP SER LYS VAL PHE TYR LEU LYS MET SEQRES 11 B 260 LYS GLY ASP TYR HIS ARG TYR LEU ALA GLU PHE LYS THR SEQRES 12 B 260 GLY ALA GLU ARG LYS GLU ALA ALA GLU SER THR LEU THR SEQRES 13 B 260 ALA TYR LYS ALA ALA GLN ASP ILE ALA THR THR GLU LEU SEQRES 14 B 260 ALA PRO THR HIS PRO ILE ARG LEU GLY LEU ALA LEU ASN SEQRES 15 B 260 PHE SER VAL PHE TYR TYR GLU ILE LEU ASN SER PRO ASP SEQRES 16 B 260 ARG ALA CYS ASN LEU ALA LYS GLN ALA PHE ASP GLU ALA SEQRES 17 B 260 ILE ALA GLU LEU ASP THR LEU GLY GLU GLU SER TYR LYS SEQRES 18 B 260 ASP SER THR LEU ILE MET GLN LEU LEU ARG ASP ASN LEU SEQRES 19 B 260 THR LEU TRP THR SER ASP MET GLN ASP ASP GLY ALA ASP SEQRES 20 B 260 GLU ILE LYS GLU ASP PRO LYS PRO ASP GLU ALA LYS ASN SEQRES 1 C 5 GLN SER TYR TPO VAL SEQRES 1 D 5 GLN SER TYR TPO VAL MODRES 3E6Y TPO C 4 THR PHOSPHOTHREONINE MODRES 3E6Y TPO D 4 THR PHOSPHOTHREONINE HET TPO C 4 11 HET TPO D 4 11 HET CW1 A 261 46 HET CL A 262 1 HET CW1 B 261 46 HETNAM TPO PHOSPHOTHREONINE HETNAM CW1 COTYLENIN A HETNAM CL CHLORIDE ION HETSYN TPO PHOSPHONOTHREONINE FORMUL 3 TPO 2(C4 H10 N O6 P) FORMUL 5 CW1 2(C34 H52 O12) FORMUL 6 CL CL 1- FORMUL 8 HOH *100(H2 O) HELIX 1 1 THR A 6 ALA A 21 1 16 HELIX 2 2 ARG A 23 SER A 37 1 15 HELIX 3 3 THR A 44 ARG A 79 1 36 HELIX 4 4 ASN A 81 LYS A 113 1 33 HELIX 5 5 LYS A 113 ALA A 118 1 6 HELIX 6 6 SER A 120 GLU A 140 1 21 HELIX 7 7 THR A 143 LEU A 169 1 27 HELIX 8 8 HIS A 173 ILE A 190 1 18 HELIX 9 9 SER A 193 ALA A 210 1 18 HELIX 10 10 GLU A 211 LEU A 215 5 5 HELIX 11 11 SER A 219 THR A 238 1 20 HELIX 12 12 THR B 6 GLU B 22 1 17 HELIX 13 13 ARG B 23 ASN B 36 1 14 HELIX 14 14 THR B 44 ARG B 79 1 36 HELIX 15 15 ASN B 81 LYS B 113 1 33 HELIX 16 16 SER B 120 GLU B 140 1 21 HELIX 17 17 THR B 143 LEU B 169 1 27 HELIX 18 18 HIS B 173 ILE B 190 1 18 HELIX 19 19 SER B 193 ILE B 209 1 17 HELIX 20 20 SER B 219 ASP B 240 1 22 LINK C TYR C 3 N TPO C 4 1555 1555 1.33 LINK C TPO C 4 N VAL C 5 1555 1555 1.34 LINK C TYR D 3 N TPO D 4 1555 1555 1.33 LINK C TPO D 4 N VAL D 5 1555 1555 1.33 SITE 1 AC1 11 ASN A 49 VAL A 53 PHE A 126 LYS A 129 SITE 2 AC1 11 PRO A 174 ASP A 222 HOH A 266 HOH A 281 SITE 3 AC1 11 HOH A 282 HOH A 315 VAL C 5 SITE 1 AC2 3 ARG A 63 GLU A 140 HOH A 270 SITE 1 AC3 8 ASN B 49 PHE B 126 LYS B 129 ASP B 222 SITE 2 AC3 8 HOH B 264 HOH B 278 HOH B 299 VAL D 5 CRYST1 41.800 141.900 51.400 90.00 114.10 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023923 0.000000 0.010701 0.00000 SCALE2 0.000000 0.007047 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021313 0.00000