HEADER LIGASE 22-AUG-08 3E9H TITLE LYSYL-TRNA SYNTHETASE FROM BACILLUS STEAROTHERMOPHILUS COMPLEXED WITH TITLE 2 L-LYSYLSULFAMOYL ADENOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: LYSINE--TRNA LIGASE, LYSRS; COMPND 5 EC: 6.1.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS AMINOACYL TRNA SYNTHETASE, LIGASE, PROTEIN BIOSYNTHESIS, AMINOACYL- KEYWDS 2 TRNA SYNTHETASE, ATP-BINDING, CYTOPLASM, MAGNESIUM, METAL-BINDING, KEYWDS 3 NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR H.SAKURAMA,T.TAKITA,B.MIKAMI,T.ITOH,K.YASUKAWA,K.INOUYE REVDAT 2 01-NOV-23 3E9H 1 REMARK REVDAT 1 14-JUL-09 3E9H 0 JRNL AUTH H.SAKURAMA,T.TAKITA,B.MIKAMI,T.ITOH,K.YASUKAWA,K.INOUYE JRNL TITL TWO CRYSTAL STRUCTURES OF LYSYL-TRNA SYNTHETASE FROM JRNL TITL 2 BACILLUS STEAROTHERMOPHILUS IN COMPLEX WITH JRNL TITL 3 LYSYLADENYLATE-LIKE COMPOUNDS: INSIGHTS INTO THE JRNL TITL 4 IRREVERSIBLE FORMATION OF THE ENZYME-BOUND ADENYLATE OF JRNL TITL 5 L-LYSINE HYDROXAMATE JRNL REF J.BIOCHEM. V. 145 555 2009 JRNL REFN ISSN 0021-924X JRNL PMID 19174549 JRNL DOI 10.1093/JB/MVP014 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3069815.870 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 102192 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 10207 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.002 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 14300 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1594 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.007 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15824 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 132 REMARK 3 SOLVENT ATOMS : 464 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.49000 REMARK 3 B22 (A**2) : -2.88000 REMARK 3 B33 (A**2) : -1.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.25 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.021 REMARK 3 BOND ANGLES (DEGREES) : 2.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.350 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 42.03 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : CIS_PEPTIDE.PARAM REMARK 3 PARAMETER FILE 5 : 051111_LYSSA.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : 051111_LYSSA.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3E9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000049043. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111633 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1BBU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG4000, 0.2M PIPES, 1.0M LICL, PH REMARK 280 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.60450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 HIS A 2 REMARK 465 GLU A 3 REMARK 465 TYR A 147 REMARK 465 HIS A 148 REMARK 465 GLY A 149 REMARK 465 LEU A 150 REMARK 465 LYS A 151 REMARK 465 LYS A 493 REMARK 465 SER B 1 REMARK 465 HIS B 2 REMARK 465 GLU B 3 REMARK 465 TYR B 147 REMARK 465 HIS B 148 REMARK 465 GLY B 149 REMARK 465 LEU B 150 REMARK 465 LYS B 151 REMARK 465 LYS B 493 REMARK 465 SER C 1 REMARK 465 HIS C 2 REMARK 465 GLU C 3 REMARK 465 TYR C 147 REMARK 465 HIS C 148 REMARK 465 GLY C 149 REMARK 465 LEU C 150 REMARK 465 LYS C 151 REMARK 465 LYS C 493 REMARK 465 SER D 1 REMARK 465 HIS D 2 REMARK 465 GLU D 3 REMARK 465 TYR D 147 REMARK 465 HIS D 148 REMARK 465 GLY D 149 REMARK 465 LEU D 150 REMARK 465 LYS D 151 REMARK 465 LYS D 493 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 157 OD2 ASP B 483 2.08 REMARK 500 OH TYR D 157 OD2 ASP D 483 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 10 CD - NE - CZ ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG A 10 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 10 NE - CZ - NH2 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG A 13 CD - NE - CZ ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG A 13 NE - CZ - NH1 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG A 13 NE - CZ - NH2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG A 69 CD - NE - CZ ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 69 NE - CZ - NH1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG A 69 NE - CZ - NH2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ARG A 91 CD - NE - CZ ANGL. DEV. = 8.8 DEGREES REMARK 500 ARG A 91 NE - CZ - NH1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 91 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 333 CD - NE - CZ ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG A 333 NE - CZ - NH1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG A 333 NE - CZ - NH2 ANGL. DEV. = -8.7 DEGREES REMARK 500 ARG A 410 CD - NE - CZ ANGL. DEV. = 11.3 DEGREES REMARK 500 ARG A 410 NE - CZ - NH1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG A 410 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 436 NE - CZ - NH1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 436 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 470 NE - CZ - NH1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 470 NE - CZ - NH2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 491 CD - NE - CZ ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG A 491 NE - CZ - NH1 ANGL. DEV. = -7.5 DEGREES REMARK 500 ARG A 491 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG B 69 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 ARG B 69 NE - CZ - NH1 ANGL. DEV. = -8.2 DEGREES REMARK 500 ARG B 69 NE - CZ - NH2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG B 91 CD - NE - CZ ANGL. DEV. = 12.5 DEGREES REMARK 500 ARG B 91 NE - CZ - NH1 ANGL. DEV. = -9.2 DEGREES REMARK 500 ARG B 91 NE - CZ - NH2 ANGL. DEV. = 8.8 DEGREES REMARK 500 ASP B 93 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG B 156 CD - NE - CZ ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG B 156 NE - CZ - NH1 ANGL. DEV. = -7.4 DEGREES REMARK 500 ARG B 156 NE - CZ - NH2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ARG B 158 CD - NE - CZ ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG B 158 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 158 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG B 186 CD - NE - CZ ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG B 186 NE - CZ - NH1 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG B 186 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B 227 NE - CZ - NH1 ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG B 227 NE - CZ - NH2 ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG B 236 CD - NE - CZ ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG B 236 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG B 236 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 LEU B 270 CA - CB - CG ANGL. DEV. = 18.3 DEGREES REMARK 500 THR B 417 N - CA - C ANGL. DEV. = -17.5 DEGREES REMARK 500 ARG B 428 CG - CD - NE ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG B 428 CD - NE - CZ ANGL. DEV. = 12.5 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 119 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 5 -63.79 100.75 REMARK 500 GLN A 56 57.45 38.07 REMARK 500 MET A 71 129.95 70.69 REMARK 500 PRO A 144 172.50 -54.10 REMARK 500 GLU A 243 -49.39 61.19 REMARK 500 PRO A 397 5.84 -64.42 REMARK 500 PRO B 26 -6.31 -57.59 REMARK 500 MET B 71 44.15 133.97 REMARK 500 GLU B 145 -134.21 -52.75 REMARK 500 GLU B 243 -45.35 66.90 REMARK 500 THR B 356 -169.51 -118.65 REMARK 500 PRO B 388 -9.86 -59.36 REMARK 500 PRO B 397 -0.18 -59.56 REMARK 500 LEU C 5 -63.37 101.75 REMARK 500 ASN C 6 0.53 -65.41 REMARK 500 GLN C 56 58.40 39.09 REMARK 500 MET C 71 130.24 71.02 REMARK 500 PRO C 144 171.24 -53.73 REMARK 500 GLU C 243 -49.11 59.64 REMARK 500 VAL C 327 -35.41 -130.41 REMARK 500 PRO C 397 6.19 -64.47 REMARK 500 PRO D 26 -6.36 -55.14 REMARK 500 MET D 71 45.92 133.46 REMARK 500 GLU D 145 -133.92 -51.31 REMARK 500 GLU D 243 -48.19 69.45 REMARK 500 PRO D 397 1.32 -60.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 271 0.07 SIDE CHAIN REMARK 500 TYR A 456 0.07 SIDE CHAIN REMARK 500 TYR B 271 0.07 SIDE CHAIN REMARK 500 TYR B 326 0.07 SIDE CHAIN REMARK 500 TYR C 271 0.07 SIDE CHAIN REMARK 500 TYR D 271 0.07 SIDE CHAIN REMARK 500 TYR D 326 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KAA A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KAA B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KAA C 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KAA D 2005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3E9I RELATED DB: PDB DBREF 3E9H A 1 493 UNP Q9RHV9 SYK_BACST 2 494 DBREF 3E9H B 1 493 UNP Q9RHV9 SYK_BACST 2 494 DBREF 3E9H C 1 493 UNP Q9RHV9 SYK_BACST 2 494 DBREF 3E9H D 1 493 UNP Q9RHV9 SYK_BACST 2 494 SEQRES 1 A 493 SER HIS GLU GLU LEU ASN ASP GLN LEU ARG VAL ARG ARG SEQRES 2 A 493 GLU LYS LEU LYS LYS ILE GLU GLU LEU GLY VAL ASP PRO SEQRES 3 A 493 PHE GLY LYS ARG PHE GLU ARG THR HIS LYS ALA GLU GLU SEQRES 4 A 493 LEU PHE GLU LEU TYR GLY ASP LEU SER LYS GLU GLU LEU SEQRES 5 A 493 GLU GLU GLN GLN ILE GLU VAL ALA VAL ALA GLY ARG ILE SEQRES 6 A 493 MET THR LYS ARG GLY MET GLY LYS ALA GLY PHE ALA HIS SEQRES 7 A 493 ILE GLN ASP VAL THR GLY GLN ILE GLN ILE TYR VAL ARG SEQRES 8 A 493 GLN ASP ASP VAL GLY GLU GLN GLN TYR GLU LEU PHE LYS SEQRES 9 A 493 ILE SER ASP LEU GLY ASP ILE VAL GLY VAL ARG GLY THR SEQRES 10 A 493 MET PHE LYS THR LYS VAL GLY GLU LEU SER ILE LYS VAL SEQRES 11 A 493 SER SER TYR GLU PHE LEU THR LYS ALA LEU ARG PRO LEU SEQRES 12 A 493 PRO GLU LYS TYR HIS GLY LEU LYS ASP ILE GLU GLN ARG SEQRES 13 A 493 TYR ARG GLN ARG TYR LEU ASP LEU ILE MET ASN PRO GLU SEQRES 14 A 493 SER LYS LYS THR PHE ILE THR ARG SER LEU ILE ILE GLN SEQRES 15 A 493 SER MET ARG ARG TYR LEU ASP SER HIS GLY TYR LEU GLU SEQRES 16 A 493 VAL GLU THR PRO MET MET HIS ALA VAL ALA GLY GLY ALA SEQRES 17 A 493 ALA ALA ARG PRO PHE ILE THR HIS HIS ASN ALA LEU ASP SEQRES 18 A 493 MET THR LEU TYR MET ARG ILE ALA ILE GLU LEU HIS LEU SEQRES 19 A 493 LYS ARG LEU ILE VAL GLY GLY LEU GLU LYS VAL TYR GLU SEQRES 20 A 493 ILE GLY ARG VAL PHE ARG ASN GLU GLY ILE SER THR ARG SEQRES 21 A 493 HIS ASN PRO GLU PHE THR MET LEU GLU LEU TYR GLU ALA SEQRES 22 A 493 TYR ALA ASP PHE ARG ASP ILE MET LYS LEU THR GLU ASN SEQRES 23 A 493 LEU ILE ALA HIS ILE ALA THR GLU VAL LEU GLY THR THR SEQRES 24 A 493 LYS ILE GLN TYR GLY GLU HIS LEU VAL ASP LEU THR PRO SEQRES 25 A 493 GLU TRP ARG ARG LEU HIS MET VAL ASP ALA ILE LYS GLU SEQRES 26 A 493 TYR VAL GLY VAL ASP PHE TRP ARG GLN MET SER ASP GLU SEQRES 27 A 493 GLU ALA ARG GLU LEU ALA LYS GLU HIS GLY VAL GLU VAL SEQRES 28 A 493 ALA PRO HIS MET THR PHE GLY HIS ILE VAL ASN GLU PHE SEQRES 29 A 493 PHE GLU GLN LYS VAL GLU ASP LYS LEU ILE GLN PRO THR SEQRES 30 A 493 PHE ILE TYR GLY HIS PRO VAL GLU ILE SER PRO LEU ALA SEQRES 31 A 493 LYS LYS ASN PRO ASP ASP PRO ARG PHE THR ASP ARG PHE SEQRES 32 A 493 GLU LEU PHE ILE VAL GLY ARG GLU HIS ALA ASN ALA PHE SEQRES 33 A 493 THR GLU LEU ASN ASP PRO ILE ASP GLN ARG GLN ARG PHE SEQRES 34 A 493 GLU GLU GLN LEU LYS GLU ARG GLU GLN GLY ASN ASP GLU SEQRES 35 A 493 ALA HIS GLU MET ASP GLU ASP PHE LEU GLU ALA LEU GLU SEQRES 36 A 493 TYR GLY MET PRO PRO THR GLY GLY LEU GLY ILE GLY VAL SEQRES 37 A 493 ASP ARG LEU VAL MET LEU LEU THR ASN SER PRO SER ILE SEQRES 38 A 493 ARG ASP VAL LEU LEU PHE PRO GLN MET ARG HIS LYS SEQRES 1 B 493 SER HIS GLU GLU LEU ASN ASP GLN LEU ARG VAL ARG ARG SEQRES 2 B 493 GLU LYS LEU LYS LYS ILE GLU GLU LEU GLY VAL ASP PRO SEQRES 3 B 493 PHE GLY LYS ARG PHE GLU ARG THR HIS LYS ALA GLU GLU SEQRES 4 B 493 LEU PHE GLU LEU TYR GLY ASP LEU SER LYS GLU GLU LEU SEQRES 5 B 493 GLU GLU GLN GLN ILE GLU VAL ALA VAL ALA GLY ARG ILE SEQRES 6 B 493 MET THR LYS ARG GLY MET GLY LYS ALA GLY PHE ALA HIS SEQRES 7 B 493 ILE GLN ASP VAL THR GLY GLN ILE GLN ILE TYR VAL ARG SEQRES 8 B 493 GLN ASP ASP VAL GLY GLU GLN GLN TYR GLU LEU PHE LYS SEQRES 9 B 493 ILE SER ASP LEU GLY ASP ILE VAL GLY VAL ARG GLY THR SEQRES 10 B 493 MET PHE LYS THR LYS VAL GLY GLU LEU SER ILE LYS VAL SEQRES 11 B 493 SER SER TYR GLU PHE LEU THR LYS ALA LEU ARG PRO LEU SEQRES 12 B 493 PRO GLU LYS TYR HIS GLY LEU LYS ASP ILE GLU GLN ARG SEQRES 13 B 493 TYR ARG GLN ARG TYR LEU ASP LEU ILE MET ASN PRO GLU SEQRES 14 B 493 SER LYS LYS THR PHE ILE THR ARG SER LEU ILE ILE GLN SEQRES 15 B 493 SER MET ARG ARG TYR LEU ASP SER HIS GLY TYR LEU GLU SEQRES 16 B 493 VAL GLU THR PRO MET MET HIS ALA VAL ALA GLY GLY ALA SEQRES 17 B 493 ALA ALA ARG PRO PHE ILE THR HIS HIS ASN ALA LEU ASP SEQRES 18 B 493 MET THR LEU TYR MET ARG ILE ALA ILE GLU LEU HIS LEU SEQRES 19 B 493 LYS ARG LEU ILE VAL GLY GLY LEU GLU LYS VAL TYR GLU SEQRES 20 B 493 ILE GLY ARG VAL PHE ARG ASN GLU GLY ILE SER THR ARG SEQRES 21 B 493 HIS ASN PRO GLU PHE THR MET LEU GLU LEU TYR GLU ALA SEQRES 22 B 493 TYR ALA ASP PHE ARG ASP ILE MET LYS LEU THR GLU ASN SEQRES 23 B 493 LEU ILE ALA HIS ILE ALA THR GLU VAL LEU GLY THR THR SEQRES 24 B 493 LYS ILE GLN TYR GLY GLU HIS LEU VAL ASP LEU THR PRO SEQRES 25 B 493 GLU TRP ARG ARG LEU HIS MET VAL ASP ALA ILE LYS GLU SEQRES 26 B 493 TYR VAL GLY VAL ASP PHE TRP ARG GLN MET SER ASP GLU SEQRES 27 B 493 GLU ALA ARG GLU LEU ALA LYS GLU HIS GLY VAL GLU VAL SEQRES 28 B 493 ALA PRO HIS MET THR PHE GLY HIS ILE VAL ASN GLU PHE SEQRES 29 B 493 PHE GLU GLN LYS VAL GLU ASP LYS LEU ILE GLN PRO THR SEQRES 30 B 493 PHE ILE TYR GLY HIS PRO VAL GLU ILE SER PRO LEU ALA SEQRES 31 B 493 LYS LYS ASN PRO ASP ASP PRO ARG PHE THR ASP ARG PHE SEQRES 32 B 493 GLU LEU PHE ILE VAL GLY ARG GLU HIS ALA ASN ALA PHE SEQRES 33 B 493 THR GLU LEU ASN ASP PRO ILE ASP GLN ARG GLN ARG PHE SEQRES 34 B 493 GLU GLU GLN LEU LYS GLU ARG GLU GLN GLY ASN ASP GLU SEQRES 35 B 493 ALA HIS GLU MET ASP GLU ASP PHE LEU GLU ALA LEU GLU SEQRES 36 B 493 TYR GLY MET PRO PRO THR GLY GLY LEU GLY ILE GLY VAL SEQRES 37 B 493 ASP ARG LEU VAL MET LEU LEU THR ASN SER PRO SER ILE SEQRES 38 B 493 ARG ASP VAL LEU LEU PHE PRO GLN MET ARG HIS LYS SEQRES 1 C 493 SER HIS GLU GLU LEU ASN ASP GLN LEU ARG VAL ARG ARG SEQRES 2 C 493 GLU LYS LEU LYS LYS ILE GLU GLU LEU GLY VAL ASP PRO SEQRES 3 C 493 PHE GLY LYS ARG PHE GLU ARG THR HIS LYS ALA GLU GLU SEQRES 4 C 493 LEU PHE GLU LEU TYR GLY ASP LEU SER LYS GLU GLU LEU SEQRES 5 C 493 GLU GLU GLN GLN ILE GLU VAL ALA VAL ALA GLY ARG ILE SEQRES 6 C 493 MET THR LYS ARG GLY MET GLY LYS ALA GLY PHE ALA HIS SEQRES 7 C 493 ILE GLN ASP VAL THR GLY GLN ILE GLN ILE TYR VAL ARG SEQRES 8 C 493 GLN ASP ASP VAL GLY GLU GLN GLN TYR GLU LEU PHE LYS SEQRES 9 C 493 ILE SER ASP LEU GLY ASP ILE VAL GLY VAL ARG GLY THR SEQRES 10 C 493 MET PHE LYS THR LYS VAL GLY GLU LEU SER ILE LYS VAL SEQRES 11 C 493 SER SER TYR GLU PHE LEU THR LYS ALA LEU ARG PRO LEU SEQRES 12 C 493 PRO GLU LYS TYR HIS GLY LEU LYS ASP ILE GLU GLN ARG SEQRES 13 C 493 TYR ARG GLN ARG TYR LEU ASP LEU ILE MET ASN PRO GLU SEQRES 14 C 493 SER LYS LYS THR PHE ILE THR ARG SER LEU ILE ILE GLN SEQRES 15 C 493 SER MET ARG ARG TYR LEU ASP SER HIS GLY TYR LEU GLU SEQRES 16 C 493 VAL GLU THR PRO MET MET HIS ALA VAL ALA GLY GLY ALA SEQRES 17 C 493 ALA ALA ARG PRO PHE ILE THR HIS HIS ASN ALA LEU ASP SEQRES 18 C 493 MET THR LEU TYR MET ARG ILE ALA ILE GLU LEU HIS LEU SEQRES 19 C 493 LYS ARG LEU ILE VAL GLY GLY LEU GLU LYS VAL TYR GLU SEQRES 20 C 493 ILE GLY ARG VAL PHE ARG ASN GLU GLY ILE SER THR ARG SEQRES 21 C 493 HIS ASN PRO GLU PHE THR MET LEU GLU LEU TYR GLU ALA SEQRES 22 C 493 TYR ALA ASP PHE ARG ASP ILE MET LYS LEU THR GLU ASN SEQRES 23 C 493 LEU ILE ALA HIS ILE ALA THR GLU VAL LEU GLY THR THR SEQRES 24 C 493 LYS ILE GLN TYR GLY GLU HIS LEU VAL ASP LEU THR PRO SEQRES 25 C 493 GLU TRP ARG ARG LEU HIS MET VAL ASP ALA ILE LYS GLU SEQRES 26 C 493 TYR VAL GLY VAL ASP PHE TRP ARG GLN MET SER ASP GLU SEQRES 27 C 493 GLU ALA ARG GLU LEU ALA LYS GLU HIS GLY VAL GLU VAL SEQRES 28 C 493 ALA PRO HIS MET THR PHE GLY HIS ILE VAL ASN GLU PHE SEQRES 29 C 493 PHE GLU GLN LYS VAL GLU ASP LYS LEU ILE GLN PRO THR SEQRES 30 C 493 PHE ILE TYR GLY HIS PRO VAL GLU ILE SER PRO LEU ALA SEQRES 31 C 493 LYS LYS ASN PRO ASP ASP PRO ARG PHE THR ASP ARG PHE SEQRES 32 C 493 GLU LEU PHE ILE VAL GLY ARG GLU HIS ALA ASN ALA PHE SEQRES 33 C 493 THR GLU LEU ASN ASP PRO ILE ASP GLN ARG GLN ARG PHE SEQRES 34 C 493 GLU GLU GLN LEU LYS GLU ARG GLU GLN GLY ASN ASP GLU SEQRES 35 C 493 ALA HIS GLU MET ASP GLU ASP PHE LEU GLU ALA LEU GLU SEQRES 36 C 493 TYR GLY MET PRO PRO THR GLY GLY LEU GLY ILE GLY VAL SEQRES 37 C 493 ASP ARG LEU VAL MET LEU LEU THR ASN SER PRO SER ILE SEQRES 38 C 493 ARG ASP VAL LEU LEU PHE PRO GLN MET ARG HIS LYS SEQRES 1 D 493 SER HIS GLU GLU LEU ASN ASP GLN LEU ARG VAL ARG ARG SEQRES 2 D 493 GLU LYS LEU LYS LYS ILE GLU GLU LEU GLY VAL ASP PRO SEQRES 3 D 493 PHE GLY LYS ARG PHE GLU ARG THR HIS LYS ALA GLU GLU SEQRES 4 D 493 LEU PHE GLU LEU TYR GLY ASP LEU SER LYS GLU GLU LEU SEQRES 5 D 493 GLU GLU GLN GLN ILE GLU VAL ALA VAL ALA GLY ARG ILE SEQRES 6 D 493 MET THR LYS ARG GLY MET GLY LYS ALA GLY PHE ALA HIS SEQRES 7 D 493 ILE GLN ASP VAL THR GLY GLN ILE GLN ILE TYR VAL ARG SEQRES 8 D 493 GLN ASP ASP VAL GLY GLU GLN GLN TYR GLU LEU PHE LYS SEQRES 9 D 493 ILE SER ASP LEU GLY ASP ILE VAL GLY VAL ARG GLY THR SEQRES 10 D 493 MET PHE LYS THR LYS VAL GLY GLU LEU SER ILE LYS VAL SEQRES 11 D 493 SER SER TYR GLU PHE LEU THR LYS ALA LEU ARG PRO LEU SEQRES 12 D 493 PRO GLU LYS TYR HIS GLY LEU LYS ASP ILE GLU GLN ARG SEQRES 13 D 493 TYR ARG GLN ARG TYR LEU ASP LEU ILE MET ASN PRO GLU SEQRES 14 D 493 SER LYS LYS THR PHE ILE THR ARG SER LEU ILE ILE GLN SEQRES 15 D 493 SER MET ARG ARG TYR LEU ASP SER HIS GLY TYR LEU GLU SEQRES 16 D 493 VAL GLU THR PRO MET MET HIS ALA VAL ALA GLY GLY ALA SEQRES 17 D 493 ALA ALA ARG PRO PHE ILE THR HIS HIS ASN ALA LEU ASP SEQRES 18 D 493 MET THR LEU TYR MET ARG ILE ALA ILE GLU LEU HIS LEU SEQRES 19 D 493 LYS ARG LEU ILE VAL GLY GLY LEU GLU LYS VAL TYR GLU SEQRES 20 D 493 ILE GLY ARG VAL PHE ARG ASN GLU GLY ILE SER THR ARG SEQRES 21 D 493 HIS ASN PRO GLU PHE THR MET LEU GLU LEU TYR GLU ALA SEQRES 22 D 493 TYR ALA ASP PHE ARG ASP ILE MET LYS LEU THR GLU ASN SEQRES 23 D 493 LEU ILE ALA HIS ILE ALA THR GLU VAL LEU GLY THR THR SEQRES 24 D 493 LYS ILE GLN TYR GLY GLU HIS LEU VAL ASP LEU THR PRO SEQRES 25 D 493 GLU TRP ARG ARG LEU HIS MET VAL ASP ALA ILE LYS GLU SEQRES 26 D 493 TYR VAL GLY VAL ASP PHE TRP ARG GLN MET SER ASP GLU SEQRES 27 D 493 GLU ALA ARG GLU LEU ALA LYS GLU HIS GLY VAL GLU VAL SEQRES 28 D 493 ALA PRO HIS MET THR PHE GLY HIS ILE VAL ASN GLU PHE SEQRES 29 D 493 PHE GLU GLN LYS VAL GLU ASP LYS LEU ILE GLN PRO THR SEQRES 30 D 493 PHE ILE TYR GLY HIS PRO VAL GLU ILE SER PRO LEU ALA SEQRES 31 D 493 LYS LYS ASN PRO ASP ASP PRO ARG PHE THR ASP ARG PHE SEQRES 32 D 493 GLU LEU PHE ILE VAL GLY ARG GLU HIS ALA ASN ALA PHE SEQRES 33 D 493 THR GLU LEU ASN ASP PRO ILE ASP GLN ARG GLN ARG PHE SEQRES 34 D 493 GLU GLU GLN LEU LYS GLU ARG GLU GLN GLY ASN ASP GLU SEQRES 35 D 493 ALA HIS GLU MET ASP GLU ASP PHE LEU GLU ALA LEU GLU SEQRES 36 D 493 TYR GLY MET PRO PRO THR GLY GLY LEU GLY ILE GLY VAL SEQRES 37 D 493 ASP ARG LEU VAL MET LEU LEU THR ASN SER PRO SER ILE SEQRES 38 D 493 ARG ASP VAL LEU LEU PHE PRO GLN MET ARG HIS LYS HET MG A2001 1 HET KAA A2002 32 HET MG B2002 1 HET KAA B2003 32 HET MG C2003 1 HET KAA C2004 32 HET MG D2004 1 HET KAA D2005 32 HETNAM MG MAGNESIUM ION HETNAM KAA 5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINE HETSYN KAA 5'-O-[N-(L-LYSYL)SULFAMOYL]ADENOSINE FORMUL 5 MG 4(MG 2+) FORMUL 6 KAA 4(C16 H26 N8 O7 S) FORMUL 13 HOH *464(H2 O) HELIX 1 1 ASP A 7 LEU A 22 1 16 HELIX 2 2 LYS A 36 GLY A 45 1 10 HELIX 3 3 SER A 48 GLN A 56 1 9 HELIX 4 4 GLN A 92 SER A 106 1 15 HELIX 5 5 ASP A 152 GLN A 159 1 8 HELIX 6 6 GLN A 159 ASN A 167 1 9 HELIX 7 7 ASN A 167 HIS A 191 1 25 HELIX 8 8 ILE A 230 GLY A 240 1 11 HELIX 9 9 ASP A 276 GLY A 297 1 22 HELIX 10 10 MET A 319 VAL A 327 1 9 HELIX 11 11 SER A 336 HIS A 347 1 12 HELIX 12 12 THR A 356 VAL A 369 1 14 HELIX 13 13 GLU A 370 LEU A 373 5 4 HELIX 14 14 PRO A 383 SER A 387 5 5 HELIX 15 15 ASP A 421 GLN A 438 1 18 HELIX 16 16 ASP A 447 TYR A 456 1 10 HELIX 17 17 VAL A 468 THR A 476 1 9 HELIX 18 18 SER A 480 VAL A 484 5 5 HELIX 19 19 ASN B 6 GLU B 21 1 16 HELIX 20 20 LYS B 36 GLY B 45 1 10 HELIX 21 21 SER B 48 GLN B 56 1 9 HELIX 22 22 GLN B 92 GLY B 96 1 5 HELIX 23 23 GLY B 96 SER B 106 1 11 HELIX 24 24 GLU B 154 GLN B 159 1 6 HELIX 25 25 GLN B 159 ASN B 167 1 9 HELIX 26 26 ASN B 167 HIS B 191 1 25 HELIX 27 27 ILE B 230 GLY B 240 1 11 HELIX 28 28 ASP B 276 GLY B 297 1 22 HELIX 29 29 MET B 319 GLY B 328 1 10 HELIX 30 30 SER B 336 GLY B 348 1 13 HELIX 31 31 THR B 356 VAL B 369 1 14 HELIX 32 32 GLU B 370 LEU B 373 5 4 HELIX 33 33 PRO B 383 SER B 387 5 5 HELIX 34 34 ASP B 421 GLN B 438 1 18 HELIX 35 35 ASP B 447 TYR B 456 1 10 HELIX 36 36 VAL B 468 LEU B 475 1 8 HELIX 37 37 SER B 480 VAL B 484 5 5 HELIX 38 38 ASP C 7 LEU C 22 1 16 HELIX 39 39 LYS C 36 GLY C 45 1 10 HELIX 40 40 SER C 48 GLN C 56 1 9 HELIX 41 41 GLN C 92 SER C 106 1 15 HELIX 42 42 ASP C 152 GLN C 159 1 8 HELIX 43 43 GLN C 159 ASN C 167 1 9 HELIX 44 44 ASN C 167 HIS C 191 1 25 HELIX 45 45 ILE C 230 GLY C 240 1 11 HELIX 46 46 ASP C 276 GLY C 297 1 22 HELIX 47 47 MET C 319 VAL C 327 1 9 HELIX 48 48 SER C 336 HIS C 347 1 12 HELIX 49 49 THR C 356 VAL C 369 1 14 HELIX 50 50 GLU C 370 LEU C 373 5 4 HELIX 51 51 PRO C 383 SER C 387 5 5 HELIX 52 52 ASP C 421 GLN C 438 1 18 HELIX 53 53 ASP C 447 TYR C 456 1 10 HELIX 54 54 VAL C 468 THR C 476 1 9 HELIX 55 55 SER C 480 VAL C 484 5 5 HELIX 56 56 ASN D 6 GLU D 21 1 16 HELIX 57 57 LYS D 36 GLY D 45 1 10 HELIX 58 58 SER D 48 GLN D 56 1 9 HELIX 59 59 GLN D 92 SER D 106 1 15 HELIX 60 60 GLU D 154 GLN D 159 1 6 HELIX 61 61 GLN D 159 ASN D 167 1 9 HELIX 62 62 ASN D 167 HIS D 191 1 25 HELIX 63 63 ILE D 230 GLY D 240 1 11 HELIX 64 64 ASP D 276 GLY D 297 1 22 HELIX 65 65 MET D 319 GLY D 328 1 10 HELIX 66 66 SER D 336 GLY D 348 1 13 HELIX 67 67 THR D 356 VAL D 369 1 14 HELIX 68 68 GLU D 370 LEU D 373 5 4 HELIX 69 69 PRO D 383 SER D 387 5 5 HELIX 70 70 ASP D 421 GLN D 438 1 18 HELIX 71 71 ASP D 447 TYR D 456 1 10 HELIX 72 72 VAL D 468 THR D 476 1 9 HELIX 73 73 SER D 480 VAL D 484 5 5 SHEET 1 A 6 GLU A 58 ARG A 69 0 SHEET 2 A 6 ALA A 74 ASP A 81 -1 O HIS A 78 N MET A 66 SHEET 3 A 6 GLY A 84 ARG A 91 -1 O ILE A 88 N ALA A 77 SHEET 4 A 6 LEU A 126 THR A 137 1 O ILE A 128 N TYR A 89 SHEET 5 A 6 ILE A 111 LYS A 120 -1 N PHE A 119 O SER A 127 SHEET 6 A 6 GLU A 58 ARG A 69 -1 N VAL A 61 O VAL A 114 SHEET 1 B 8 LEU A 194 GLU A 195 0 SHEET 2 B 8 LYS A 244 PHE A 252 1 O LYS A 244 N LEU A 194 SHEET 3 B 8 GLU A 264 ALA A 273 -1 O MET A 267 N GLY A 249 SHEET 4 B 8 THR A 461 GLY A 467 -1 O GLY A 462 N GLU A 272 SHEET 5 B 8 ARG A 410 THR A 417 -1 N PHE A 416 O GLY A 463 SHEET 6 B 8 ARG A 402 ILE A 407 -1 N LEU A 405 O HIS A 412 SHEET 7 B 8 THR A 377 TYR A 380 -1 N THR A 377 O PHE A 406 SHEET 8 B 8 ARG A 315 HIS A 318 1 N LEU A 317 O PHE A 378 SHEET 1 C 3 MET A 201 HIS A 202 0 SHEET 2 C 3 MET A 222 MET A 226 -1 O TYR A 225 N HIS A 202 SHEET 3 C 3 ILE A 214 HIS A 217 -1 N HIS A 217 O MET A 222 SHEET 1 D 2 LYS A 300 TYR A 303 0 SHEET 2 D 2 HIS A 306 ASP A 309 -1 O HIS A 306 N TYR A 303 SHEET 1 E 6 GLU B 58 ARG B 69 0 SHEET 2 E 6 ALA B 74 ASP B 81 -1 O GLN B 80 N ARG B 64 SHEET 3 E 6 GLY B 84 ARG B 91 -1 O ILE B 88 N ALA B 77 SHEET 4 E 6 LEU B 126 THR B 137 1 O ILE B 128 N TYR B 89 SHEET 5 E 6 ILE B 111 LYS B 120 -1 N THR B 117 O LYS B 129 SHEET 6 E 6 GLU B 58 ARG B 69 -1 N VAL B 61 O VAL B 114 SHEET 1 F 8 LEU B 194 GLU B 195 0 SHEET 2 F 8 LYS B 244 PHE B 252 1 O TYR B 246 N LEU B 194 SHEET 3 F 8 GLU B 264 ALA B 273 -1 O PHE B 265 N VAL B 251 SHEET 4 F 8 THR B 461 GLY B 467 -1 O GLY B 462 N GLU B 272 SHEET 5 F 8 ARG B 410 THR B 417 -1 N HIS B 412 O GLY B 467 SHEET 6 F 8 ARG B 402 ILE B 407 -1 N LEU B 405 O HIS B 412 SHEET 7 F 8 THR B 377 TYR B 380 -1 N THR B 377 O PHE B 406 SHEET 8 F 8 ARG B 315 HIS B 318 1 N ARG B 315 O PHE B 378 SHEET 1 G 3 MET B 201 HIS B 202 0 SHEET 2 G 3 MET B 222 MET B 226 -1 O TYR B 225 N HIS B 202 SHEET 3 G 3 ILE B 214 HIS B 217 -1 N THR B 215 O LEU B 224 SHEET 1 H 2 LYS B 300 TYR B 303 0 SHEET 2 H 2 HIS B 306 ASP B 309 -1 O VAL B 308 N ILE B 301 SHEET 1 I 6 GLU C 58 ARG C 69 0 SHEET 2 I 6 ALA C 74 ASP C 81 -1 O HIS C 78 N MET C 66 SHEET 3 I 6 GLY C 84 ARG C 91 -1 O ILE C 88 N ALA C 77 SHEET 4 I 6 LEU C 126 THR C 137 1 O ILE C 128 N TYR C 89 SHEET 5 I 6 ILE C 111 LYS C 120 -1 N PHE C 119 O SER C 127 SHEET 6 I 6 GLU C 58 ARG C 69 -1 N VAL C 61 O VAL C 114 SHEET 1 J 8 LEU C 194 GLU C 195 0 SHEET 2 J 8 LYS C 244 PHE C 252 1 O LYS C 244 N LEU C 194 SHEET 3 J 8 GLU C 264 ALA C 273 -1 O TYR C 271 N VAL C 245 SHEET 4 J 8 THR C 461 GLY C 467 -1 O GLY C 462 N GLU C 272 SHEET 5 J 8 ARG C 410 THR C 417 -1 N PHE C 416 O GLY C 463 SHEET 6 J 8 ARG C 402 ILE C 407 -1 N LEU C 405 O HIS C 412 SHEET 7 J 8 THR C 377 TYR C 380 -1 N THR C 377 O PHE C 406 SHEET 8 J 8 ARG C 315 HIS C 318 1 N LEU C 317 O PHE C 378 SHEET 1 K 3 MET C 201 HIS C 202 0 SHEET 2 K 3 MET C 222 MET C 226 -1 O TYR C 225 N HIS C 202 SHEET 3 K 3 ILE C 214 HIS C 217 -1 N THR C 215 O LEU C 224 SHEET 1 L 2 LYS C 300 TYR C 303 0 SHEET 2 L 2 HIS C 306 ASP C 309 -1 O HIS C 306 N TYR C 303 SHEET 1 M 6 GLU D 58 ARG D 69 0 SHEET 2 M 6 ALA D 74 ASP D 81 -1 O GLN D 80 N ARG D 64 SHEET 3 M 6 GLY D 84 ARG D 91 -1 O ILE D 88 N ALA D 77 SHEET 4 M 6 LEU D 126 THR D 137 1 O ILE D 128 N GLN D 87 SHEET 5 M 6 ILE D 111 LYS D 120 -1 N THR D 117 O LYS D 129 SHEET 6 M 6 GLU D 58 ARG D 69 -1 N VAL D 61 O VAL D 114 SHEET 1 N 8 LEU D 194 GLU D 195 0 SHEET 2 N 8 LYS D 244 PHE D 252 1 O LYS D 244 N LEU D 194 SHEET 3 N 8 GLU D 264 ALA D 273 -1 O PHE D 265 N VAL D 251 SHEET 4 N 8 THR D 461 GLY D 467 -1 O GLY D 462 N GLU D 272 SHEET 5 N 8 ARG D 410 THR D 417 -1 N HIS D 412 O GLY D 467 SHEET 6 N 8 ARG D 402 ILE D 407 -1 N LEU D 405 O HIS D 412 SHEET 7 N 8 THR D 377 TYR D 380 -1 N THR D 377 O PHE D 406 SHEET 8 N 8 ARG D 315 HIS D 318 1 N ARG D 315 O PHE D 378 SHEET 1 O 3 MET D 201 HIS D 202 0 SHEET 2 O 3 MET D 222 MET D 226 -1 O TYR D 225 N HIS D 202 SHEET 3 O 3 ILE D 214 HIS D 217 -1 N THR D 215 O LEU D 224 SHEET 1 P 2 LYS D 300 TYR D 303 0 SHEET 2 P 2 HIS D 306 ASP D 309 -1 O VAL D 308 N ILE D 301 LINK OE2 GLU B 404 MG MG B2002 1555 1555 2.41 LINK OE2 GLU D 404 MG MG D2004 1555 1555 2.48 CISPEP 1 PRO A 312 GLU A 313 0 -0.31 CISPEP 2 PRO B 312 GLU B 313 0 -1.61 CISPEP 3 PRO C 312 GLU C 313 0 0.09 CISPEP 4 PRO D 312 GLU D 313 0 -1.60 SITE 1 AC1 5 ARG A 402 GLU A 404 GLU A 411 ASN A 414 SITE 2 AC1 5 KAA A2002 SITE 1 AC2 25 GLY A 207 GLU A 231 ARG A 253 GLU A 255 SITE 2 AC2 25 ARG A 260 HIS A 261 ASN A 262 PHE A 265 SITE 3 AC2 25 MET A 267 GLU A 269 TYR A 271 GLU A 411 SITE 4 AC2 25 HIS A 412 ALA A 413 ASN A 414 PHE A 416 SITE 5 AC2 25 GLU A 418 GLY A 463 GLY A 467 ARG A 470 SITE 6 AC2 25 ILE A 481 HOH A 509 HOH A 730 HOH A 846 SITE 7 AC2 25 MG A2001 SITE 1 AC3 5 ARG B 402 GLU B 404 GLU B 411 ASN B 414 SITE 2 AC3 5 KAA B2003 SITE 1 AC4 23 GLY B 207 GLU B 231 ARG B 253 GLU B 255 SITE 2 AC4 23 ARG B 260 HIS B 261 ASN B 262 PHE B 265 SITE 3 AC4 23 MET B 267 GLU B 269 TYR B 271 GLU B 411 SITE 4 AC4 23 HIS B 412 ALA B 413 ASN B 414 PHE B 416 SITE 5 AC4 23 GLU B 418 GLY B 467 ARG B 470 ILE B 481 SITE 6 AC4 23 HOH B 503 HOH B 963 MG B2002 SITE 1 AC5 5 ARG C 402 GLU C 404 GLU C 411 ASN C 414 SITE 2 AC5 5 KAA C2004 SITE 1 AC6 25 GLY C 207 GLU C 231 ARG C 253 GLU C 255 SITE 2 AC6 25 ARG C 260 HIS C 261 ASN C 262 PHE C 265 SITE 3 AC6 25 MET C 267 GLU C 269 TYR C 271 GLU C 411 SITE 4 AC6 25 HIS C 412 ALA C 413 ASN C 414 PHE C 416 SITE 5 AC6 25 GLU C 418 GLY C 463 GLY C 467 ARG C 470 SITE 6 AC6 25 ILE C 481 HOH C 559 HOH C 677 HOH C 738 SITE 7 AC6 25 MG C2003 SITE 1 AC7 5 ARG D 402 GLU D 404 GLU D 411 ASN D 414 SITE 2 AC7 5 KAA D2005 SITE 1 AC8 23 GLY D 207 GLU D 231 ARG D 253 GLU D 255 SITE 2 AC8 23 ARG D 260 HIS D 261 ASN D 262 PHE D 265 SITE 3 AC8 23 MET D 267 GLU D 269 TYR D 271 GLU D 411 SITE 4 AC8 23 HIS D 412 ALA D 413 ASN D 414 PHE D 416 SITE 5 AC8 23 GLU D 418 GLY D 467 ARG D 470 ILE D 481 SITE 6 AC8 23 HOH D 779 HOH D 780 MG D2004 CRYST1 79.636 83.209 150.815 90.00 89.95 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012557 0.000000 -0.000010 0.00000 SCALE2 0.000000 0.012018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006631 0.00000