HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-SEP-08 3EEQ TITLE CRYSTAL STRUCTURE OF A PUTATIVE COBALAMIN BIOSYNTHESIS PROTEIN G TITLE 2 HOMOLOG FROM SULFOLOBUS SOLFATARICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE COBALAMIN BIOSYNTHESIS PROTEIN G HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 GENE: CBIG-LIKE, SSO2297; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,M.GILMORE,K.T.BAIN,S.CHANG,R.ROMERO,S.WASSERMAN, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 10-FEB-21 3EEQ 1 AUTHOR JRNL REMARK REVDAT 4 14-NOV-18 3EEQ 1 AUTHOR REVDAT 3 25-OCT-17 3EEQ 1 REMARK REVDAT 2 24-FEB-09 3EEQ 1 VERSN REVDAT 1 30-SEP-08 3EEQ 0 JRNL AUTH J.B.BONANNO,M.GILMORE,K.T.BAIN,S.CHANG,R.ROMERO,S.WASSERMAN, JRNL AUTH 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE COBALAMIN BIOSYNTHESIS JRNL TITL 2 PROTEIN G HOMOLOG FROM SULFOLOBUS SOLFATARICUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 31347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1532 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2130 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.4330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4640 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.23000 REMARK 3 B22 (A**2) : -2.96000 REMARK 3 B33 (A**2) : 1.73000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.365 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.264 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.237 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.506 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4752 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6461 ; 1.734 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 610 ; 6.755 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 175 ;34.387 ;24.229 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 810 ;18.394 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;24.827 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 788 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3416 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3069 ; 1.060 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4933 ; 1.949 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1683 ; 2.655 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1527 ; 4.272 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EEQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049230. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31415 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.737 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.50 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 25.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 14.80 REMARK 200 R MERGE FOR SHELL (I) : 0.59300 REMARK 200 R SYM FOR SHELL (I) : 0.59300 REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 4.5, 19% PEG REMARK 280 4K, 200MM AMMONIUM SULFATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.00750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.66100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.75000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.66100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.00750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.75000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 7 REMARK 465 THR A 129 REMARK 465 ALA A 130 REMARK 465 ALA A 131 REMARK 465 GLU A 132 REMARK 465 ILE A 133 REMARK 465 LYS A 134 REMARK 465 GLY A 135 REMARK 465 ASN A 187 REMARK 465 SER A 188 REMARK 465 GLU A 189 REMARK 465 GLU A 190 REMARK 465 LEU A 293 REMARK 465 ILE A 294 REMARK 465 GLU A 295 REMARK 465 VAL A 296 REMARK 465 GLY A 297 REMARK 465 LEU A 298 REMARK 465 GLY A 336 REMARK 465 HIS A 337 REMARK 465 HIS A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 MET B 7 REMARK 465 SER B 83 REMARK 465 LYS B 84 REMARK 465 THR B 85 REMARK 465 THR B 129 REMARK 465 ALA B 130 REMARK 465 ALA B 131 REMARK 465 GLU B 132 REMARK 465 ILE B 133 REMARK 465 LYS B 134 REMARK 465 GLY B 135 REMARK 465 ASP B 175 REMARK 465 VAL B 176 REMARK 465 ASN B 187 REMARK 465 SER B 188 REMARK 465 GLU B 189 REMARK 465 GLU B 190 REMARK 465 GLY B 199 REMARK 465 SER B 290 REMARK 465 LYS B 291 REMARK 465 THR B 292 REMARK 465 LEU B 293 REMARK 465 ILE B 294 REMARK 465 GLU B 295 REMARK 465 VAL B 296 REMARK 465 GLY B 297 REMARK 465 LEU B 298 REMARK 465 HIS B 338 REMARK 465 HIS B 339 REMARK 465 HIS B 340 REMARK 465 HIS B 341 REMARK 465 HIS B 342 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 136 CG CD CE NZ REMARK 470 ARG A 165 CG CD NE CZ NH1 NH2 REMARK 470 SER A 168 OG REMARK 470 ASP A 175 CG OD1 OD2 REMARK 470 VAL A 176 CG1 CG2 REMARK 470 ASN A 177 CG OD1 ND2 REMARK 470 VAL A 178 CG1 CG2 REMARK 470 ASN A 179 CG OD1 ND2 REMARK 470 GLU A 182 CG CD OE1 OE2 REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 VAL A 186 CG1 CG2 REMARK 470 ASP A 200 CG OD1 OD2 REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 GLU A 202 CG CD OE1 OE2 REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 GLU A 247 CG CD OE1 OE2 REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 LYS A 299 CG CD CE NZ REMARK 470 ARG A 312 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 315 CG CD CE NZ REMARK 470 SER A 324 OG REMARK 470 ARG A 325 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 326 CG OD1 ND2 REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 ASP B 166 CG OD1 OD2 REMARK 470 ASN B 177 CG OD1 ND2 REMARK 470 VAL B 178 CG1 CG2 REMARK 470 ASN B 179 CG OD1 ND2 REMARK 470 GLU B 182 CG CD OE1 OE2 REMARK 470 LYS B 185 CG CD CE NZ REMARK 470 VAL B 186 CG1 CG2 REMARK 470 ASP B 200 CG OD1 OD2 REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 GLU B 202 CG CD OE1 OE2 REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 LYS B 227 CG CD CE NZ REMARK 470 LYS B 245 CG CD CE NZ REMARK 470 LYS B 261 CG CD CE NZ REMARK 470 ARG B 269 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 275 CG CD OE1 OE2 REMARK 470 LYS B 299 CG CD CE NZ REMARK 470 ARG B 312 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 315 CG CD CE NZ REMARK 470 ARG B 325 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 326 CG OD1 ND2 REMARK 470 SER B 327 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE LYS A 227 OE1 GLU A 229 2.16 REMARK 500 OH TYR A 236 NH2 ARG A 246 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 280 O LYS B 206 3645 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 15 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 123 -168.75 -119.50 REMARK 500 ARG A 165 14.08 -68.76 REMARK 500 PRO A 181 167.96 -49.24 REMARK 500 ASP A 200 43.30 -105.07 REMARK 500 ASN A 313 -2.08 77.32 REMARK 500 SER A 324 -173.73 -179.69 REMARK 500 GLU B 53 77.40 -101.24 REMARK 500 MET B 68 -174.02 177.28 REMARK 500 ALA B 81 81.69 -66.20 REMARK 500 HIS B 107 -82.78 -54.05 REMARK 500 TRP B 108 27.59 -75.06 REMARK 500 ILE B 147 77.75 57.56 REMARK 500 ARG B 165 4.66 -69.17 REMARK 500 ASN B 179 95.40 -59.24 REMARK 500 PRO B 181 -171.86 -27.06 REMARK 500 GLU B 247 -20.33 -38.52 REMARK 500 ILE B 251 146.19 -177.86 REMARK 500 SER B 324 -172.44 -175.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10037Q RELATED DB: TARGETDB DBREF 3EEQ A 7 336 UNP Q97WD0 Q97WD0_SULSO 12 336 DBREF 3EEQ B 7 336 UNP Q97WD0 Q97WD0_SULSO 12 336 SEQADV 3EEQ SER A 8 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ LEU A 9 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ ILE A 127 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ THR A 128 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ THR A 129 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS A 337 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS A 338 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS A 339 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS A 340 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS A 341 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS A 342 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ SER B 8 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ LEU B 9 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ ILE B 127 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ THR B 128 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ THR B 129 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS B 337 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS B 338 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS B 339 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS B 340 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS B 341 UNP Q97WD0 EXPRESSION TAG SEQADV 3EEQ HIS B 342 UNP Q97WD0 EXPRESSION TAG SEQRES 1 A 336 MET SER LEU ILE GLU ASN LEU TRP ARG GLY ILE CYS ILE SEQRES 2 A 336 ILE SER ALA SER GLU ASP ALA PHE SER ALA GLY GLU THR SEQRES 3 A 336 ILE LYS GLU LYS LEU LYS SER PHE GLU ILE PRO VAL VAL SEQRES 4 A 336 HIS TYR ARG TYR LYS ASP ALA GLU ILE GLU THR ILE TRP SEQRES 5 A 336 LYS CYS TYR ASP ALA ILE VAL PHE VAL MET ALA LEU GLU SEQRES 6 A 336 GLY ALA THR ARG ILE VAL CYS LYS TYR ALA LYS SER LYS SEQRES 7 A 336 THR GLU ASP PRO ALA ILE VAL CYS ILE ASP ASP LYS ILE SEQRES 8 A 336 ASN TYR VAL ILE PRO LEU LEU GLY GLY HIS TRP GLY ALA SEQRES 9 A 336 ASN ASP ILE ALA ARG GLU LEU SER VAL ILE LEU ASN SER SEQRES 10 A 336 THR PRO ILE ILE THR THR ALA ALA GLU ILE LYS GLY LYS SEQRES 11 A 336 LEU SER ILE GLU ARG ILE ALA ASN ILE LEU ILE ALA LYS SEQRES 12 A 336 ILE ILE ASN PRO GLU ASN ILE VAL LYS ILE ASN ALA ALA SEQRES 13 A 336 LEU LEU ARG ASP GLU SER ILE CYS ILE ASP GLY ILE ASP SEQRES 14 A 336 VAL ASN VAL ASN PHE PRO GLU ASN ILE LYS VAL ASN SER SEQRES 15 A 336 GLU GLU CYS SER TYR ILE ILE SER LEU ARG GLY ASP LYS SEQRES 16 A 336 GLU TYR LYS ASP LYS ILE VAL VAL TRP LEU LYS PRO LEU SEQRES 17 A 336 LYS ILE SER ILE GLY ILE GLY SER LYS LYS ASP VAL LYS SEQRES 18 A 336 MET GLU GLU ILE ARG ASP GLY ILE TYR LYS VAL LEU GLU SEQRES 19 A 336 ARG LEU ASN LEU LYS ARG GLU ARG ILE GLY ILE ILE ALA SEQRES 20 A 336 SER ILE ARG GLU GLU VAL LYS LYS ILE ALA ASP GLU PHE SEQRES 21 A 336 ASN VAL ARG PHE ARG LEU VAL ASN GLU GLU GLU ILE ASN SEQRES 22 A 336 ASN PHE MET ASN PRO CYS LEU THR PRO PRO SER LYS THR SEQRES 23 A 336 LEU ILE GLU VAL GLY LEU LYS GLY VAL ALA GLU ILE SER SEQRES 24 A 336 ALA LEU ILE ALA GLY GLY ARG ASN SER LYS LEU ILE LEU SEQRES 25 A 336 ARG LYS ILE ALA ILE SER ARG ASN SER THR ILE ALA VAL SEQRES 26 A 336 ALA THR TYR GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 336 MET SER LEU ILE GLU ASN LEU TRP ARG GLY ILE CYS ILE SEQRES 2 B 336 ILE SER ALA SER GLU ASP ALA PHE SER ALA GLY GLU THR SEQRES 3 B 336 ILE LYS GLU LYS LEU LYS SER PHE GLU ILE PRO VAL VAL SEQRES 4 B 336 HIS TYR ARG TYR LYS ASP ALA GLU ILE GLU THR ILE TRP SEQRES 5 B 336 LYS CYS TYR ASP ALA ILE VAL PHE VAL MET ALA LEU GLU SEQRES 6 B 336 GLY ALA THR ARG ILE VAL CYS LYS TYR ALA LYS SER LYS SEQRES 7 B 336 THR GLU ASP PRO ALA ILE VAL CYS ILE ASP ASP LYS ILE SEQRES 8 B 336 ASN TYR VAL ILE PRO LEU LEU GLY GLY HIS TRP GLY ALA SEQRES 9 B 336 ASN ASP ILE ALA ARG GLU LEU SER VAL ILE LEU ASN SER SEQRES 10 B 336 THR PRO ILE ILE THR THR ALA ALA GLU ILE LYS GLY LYS SEQRES 11 B 336 LEU SER ILE GLU ARG ILE ALA ASN ILE LEU ILE ALA LYS SEQRES 12 B 336 ILE ILE ASN PRO GLU ASN ILE VAL LYS ILE ASN ALA ALA SEQRES 13 B 336 LEU LEU ARG ASP GLU SER ILE CYS ILE ASP GLY ILE ASP SEQRES 14 B 336 VAL ASN VAL ASN PHE PRO GLU ASN ILE LYS VAL ASN SER SEQRES 15 B 336 GLU GLU CYS SER TYR ILE ILE SER LEU ARG GLY ASP LYS SEQRES 16 B 336 GLU TYR LYS ASP LYS ILE VAL VAL TRP LEU LYS PRO LEU SEQRES 17 B 336 LYS ILE SER ILE GLY ILE GLY SER LYS LYS ASP VAL LYS SEQRES 18 B 336 MET GLU GLU ILE ARG ASP GLY ILE TYR LYS VAL LEU GLU SEQRES 19 B 336 ARG LEU ASN LEU LYS ARG GLU ARG ILE GLY ILE ILE ALA SEQRES 20 B 336 SER ILE ARG GLU GLU VAL LYS LYS ILE ALA ASP GLU PHE SEQRES 21 B 336 ASN VAL ARG PHE ARG LEU VAL ASN GLU GLU GLU ILE ASN SEQRES 22 B 336 ASN PHE MET ASN PRO CYS LEU THR PRO PRO SER LYS THR SEQRES 23 B 336 LEU ILE GLU VAL GLY LEU LYS GLY VAL ALA GLU ILE SER SEQRES 24 B 336 ALA LEU ILE ALA GLY GLY ARG ASN SER LYS LEU ILE LEU SEQRES 25 B 336 ARG LYS ILE ALA ILE SER ARG ASN SER THR ILE ALA VAL SEQRES 26 B 336 ALA THR TYR GLU GLY HIS HIS HIS HIS HIS HIS HET SO4 A 1 5 HET SO4 A 2 5 HET SO4 A 3 5 HET SO4 A 5 5 HET SO4 B 4 5 HET SO4 B 6 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 HOH *34(H2 O) HELIX 1 1 SER A 8 LEU A 13 5 6 HELIX 2 2 SER A 23 PHE A 40 1 18 HELIX 3 3 LYS A 50 ALA A 52 5 3 HELIX 4 4 GLU A 53 TRP A 58 1 6 HELIX 5 5 ALA A 69 ALA A 81 1 13 HELIX 6 6 GLY A 109 LEU A 121 1 13 HELIX 7 7 SER A 138 LEU A 146 1 9 HELIX 8 8 ASN A 152 GLU A 154 5 3 HELIX 9 9 ASN A 155 ARG A 165 1 11 HELIX 10 10 LYS A 227 ASN A 243 1 17 HELIX 11 11 LYS A 245 GLU A 247 5 3 HELIX 12 12 GLU A 258 ASN A 267 1 10 HELIX 13 13 ASN A 274 ASN A 280 1 7 HELIX 14 14 GLY A 300 GLY A 311 1 12 HELIX 15 15 LEU B 9 LEU B 13 5 5 HELIX 16 16 SER B 23 SER B 39 1 17 HELIX 17 17 GLU B 53 TYR B 61 1 9 HELIX 18 18 ALA B 69 ALA B 81 1 13 HELIX 19 19 GLY B 109 LEU B 121 1 13 HELIX 20 20 SER B 138 ILE B 147 1 10 HELIX 21 21 ASN B 152 GLU B 154 5 3 HELIX 22 22 ASN B 155 ARG B 165 1 11 HELIX 23 23 LYS B 227 LEU B 242 1 16 HELIX 24 24 LYS B 245 GLU B 247 5 3 HELIX 25 25 ARG B 256 GLU B 258 5 3 HELIX 26 26 VAL B 259 PHE B 266 1 8 HELIX 27 27 ASN B 274 PHE B 281 1 8 HELIX 28 28 GLY B 300 GLY B 311 1 12 SHEET 1 A 6 VAL A 44 ARG A 48 0 SHEET 2 A 6 ILE A 17 SER A 21 1 N ILE A 19 O TYR A 47 SHEET 3 A 6 ALA A 63 VAL A 67 1 O VAL A 65 N CYS A 18 SHEET 4 A 6 ALA A 89 ILE A 93 1 O VAL A 91 N PHE A 66 SHEET 5 A 6 TYR A 99 LEU A 104 -1 O LEU A 103 N ILE A 90 SHEET 6 A 6 THR A 124 PRO A 125 1 O THR A 124 N VAL A 100 SHEET 1 B 4 ALA A 148 ILE A 150 0 SHEET 2 B 4 ILE A 207 PRO A 213 -1 O LYS A 212 N LYS A 149 SHEET 3 B 4 TYR A 193 SER A 196 1 N ILE A 194 O ILE A 207 SHEET 4 B 4 ILE A 169 ASP A 172 1 N CYS A 170 O ILE A 195 SHEET 1 C 5 ARG A 269 LEU A 272 0 SHEET 2 C 5 ILE A 249 SER A 254 1 N ILE A 252 O ARG A 271 SHEET 3 C 5 LYS A 215 SER A 222 1 N ILE A 216 O GLY A 250 SHEET 4 C 5 SER A 327 TYR A 334 -1 O ALA A 332 N SER A 217 SHEET 5 C 5 LEU A 316 SER A 324 -1 N ILE A 317 O VAL A 331 SHEET 1 D 6 VAL B 44 ARG B 48 0 SHEET 2 D 6 ILE B 17 SER B 21 1 N ILE B 19 O VAL B 45 SHEET 3 D 6 ALA B 63 VAL B 67 1 O VAL B 65 N ILE B 20 SHEET 4 D 6 ALA B 89 ILE B 93 1 O ILE B 93 N PHE B 66 SHEET 5 D 6 TYR B 99 LEU B 104 -1 O ILE B 101 N CYS B 92 SHEET 6 D 6 THR B 124 PRO B 125 1 O THR B 124 N VAL B 100 SHEET 1 E 4 ALA B 148 ILE B 150 0 SHEET 2 E 4 ILE B 207 PRO B 213 -1 O LYS B 212 N LYS B 149 SHEET 3 E 4 TYR B 193 SER B 196 1 N SER B 196 O LEU B 211 SHEET 4 E 4 ILE B 169 ASP B 172 1 N ASP B 172 O ILE B 195 SHEET 1 F 5 PHE B 270 LEU B 272 0 SHEET 2 F 5 ILE B 249 SER B 254 1 N ILE B 252 O ARG B 271 SHEET 3 F 5 LYS B 215 SER B 222 1 N ILE B 218 O ALA B 253 SHEET 4 F 5 SER B 327 TYR B 334 -1 O ALA B 332 N SER B 217 SHEET 5 F 5 LEU B 316 SER B 324 -1 N ILE B 317 O VAL B 331 SSBOND 1 CYS A 60 CYS A 285 1555 1555 2.05 SSBOND 2 CYS A 78 CYS B 78 1555 1555 2.00 SSBOND 3 CYS A 170 CYS A 191 1555 1555 2.02 SSBOND 4 CYS B 60 CYS B 285 1555 1555 2.07 SSBOND 5 CYS B 170 CYS B 191 1555 1555 2.08 SITE 1 AC1 6 ALA A 52 GLU A 53 ILE A 54 GLU A 55 SITE 2 AC1 6 TYR A 80 HIS B 337 SITE 1 AC2 3 ASN A 111 ARG A 115 LYS B 237 SITE 1 AC3 7 LYS A 299 GLY A 300 VAL A 301 ALA A 302 SITE 2 AC3 7 LYS A 320 THR A 328 HOH A 343 SITE 1 AC4 5 ALA A 22 ARG A 48 TYR A 49 LYS A 50 SITE 2 AC4 5 HOH A 352 SITE 1 AC5 4 LYS B 299 GLY B 300 LYS B 320 HOH B 344 SITE 1 AC6 3 ASN B 111 ASP B 112 ARG B 115 CRYST1 66.015 97.500 107.322 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015148 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010256 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009318 0.00000