HEADER LIGASE 10-SEP-08 3EFS TITLE BIOTIN PROTEIN LIGASE FROM AQUIFEX AEOLICUS IN COMPLEX WITH BIOTIN AND TITLE 2 ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIOTIN [ACETYL-COA-CARBOXYLASE] LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BIOTIN PROTEIN LIGASE; COMPND 5 EC: 6.3.4.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 63363; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS BPL ATP BIOTIN COMPLEX, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR C.M.TRON,I.W.MCNAE,M.D.WALKINSHAW,R.L.BAXTER,D.J.CAMPOPIANO REVDAT 3 01-NOV-23 3EFS 1 REMARK REVDAT 2 06-NOV-19 3EFS 1 JRNL SEQADV REVDAT 1 09-JUN-09 3EFS 0 JRNL AUTH C.M.TRON,I.W.MCNAE,M.NUTLEY,D.J.CLARKE,A.COOPER, JRNL AUTH 2 M.D.WALKINSHAW,R.L.BAXTER,D.J.CAMPOPIANO JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF THE BIOTIN PROTEIN JRNL TITL 2 LIGASE FROM AQUIFEX AEOLICUS REVEAL A CRITICAL ROLE FOR A JRNL TITL 3 CONSERVED RESIDUE IN TARGET SPECIFICITY. JRNL REF J.MOL.BIOL. V. 387 129 2009 JRNL REFN ESSN 1089-8638 JRNL PMID 19385043 JRNL DOI 10.1016/J.JMB.2008.12.086 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 21993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6240 - 4.5980 1.00 2821 132 0.2140 0.2470 REMARK 3 2 4.5980 - 3.6510 1.00 2659 163 0.1960 0.2180 REMARK 3 3 3.6510 - 3.1890 1.00 2630 140 0.2020 0.2290 REMARK 3 4 3.1890 - 2.8980 0.99 2600 157 0.2520 0.2740 REMARK 3 5 2.8980 - 2.6900 0.99 2600 137 0.2610 0.3100 REMARK 3 6 2.6900 - 2.5320 0.99 2567 141 0.2780 0.3150 REMARK 3 7 2.5320 - 2.4050 0.99 2566 139 0.2640 0.3370 REMARK 3 8 2.4050 - 2.3000 0.99 2585 126 0.2420 0.2930 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 50.62 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.62000 REMARK 3 B22 (A**2) : 0.04600 REMARK 3 B33 (A**2) : 0.57400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3924 REMARK 3 ANGLE : 0.688 5272 REMARK 3 CHIRALITY : 0.037 582 REMARK 3 PLANARITY : 0.003 642 REMARK 3 DIHEDRAL : 13.414 1530 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:18) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4395 -5.9131 30.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.4381 T22: 0.2067 REMARK 3 T33: 0.1755 T12: -0.0103 REMARK 3 T13: 0.0328 T23: -0.0751 REMARK 3 L TENSOR REMARK 3 L11: 0.8948 L22: 1.2075 REMARK 3 L33: 2.4574 L12: 0.8579 REMARK 3 L13: -0.6366 L23: -0.7555 REMARK 3 S TENSOR REMARK 3 S11: 0.3005 S12: -0.3558 S13: 0.2393 REMARK 3 S21: 1.0392 S22: -0.3431 S23: 0.1868 REMARK 3 S31: 0.4244 S32: 0.2904 S33: 0.1745 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 19:51) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0567 -2.2331 24.3709 REMARK 3 T TENSOR REMARK 3 T11: 0.3298 T22: 0.2327 REMARK 3 T33: 0.1993 T12: 0.0969 REMARK 3 T13: -0.0974 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 2.2245 L22: 1.6582 REMARK 3 L33: 2.8881 L12: 0.5624 REMARK 3 L13: -0.1266 L23: -0.2698 REMARK 3 S TENSOR REMARK 3 S11: 0.3585 S12: -0.2936 S13: 0.3139 REMARK 3 S21: -0.1020 S22: -0.3181 S23: 0.5574 REMARK 3 S31: -0.5338 S32: 0.1250 S33: 0.1857 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 52:67) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0052 -12.3429 21.1090 REMARK 3 T TENSOR REMARK 3 T11: 0.0944 T22: 0.0651 REMARK 3 T33: 0.1443 T12: 0.0319 REMARK 3 T13: -0.0318 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.9653 L22: 1.2800 REMARK 3 L33: 1.9910 L12: -0.7937 REMARK 3 L13: -1.9392 L23: 1.7492 REMARK 3 S TENSOR REMARK 3 S11: 0.0533 S12: -0.2837 S13: 0.1421 REMARK 3 S21: -0.1279 S22: 0.1663 S23: -0.0027 REMARK 3 S31: -0.2868 S32: 0.0650 S33: 0.3938 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 68:81) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3457 -17.4946 13.9857 REMARK 3 T TENSOR REMARK 3 T11: 0.1443 T22: 0.0979 REMARK 3 T33: 0.1709 T12: 0.0138 REMARK 3 T13: -0.0053 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 8.1696 L22: 1.8366 REMARK 3 L33: 1.8544 L12: 2.5935 REMARK 3 L13: -3.3514 L23: -1.0145 REMARK 3 S TENSOR REMARK 3 S11: -0.2619 S12: 0.2375 S13: -0.5836 REMARK 3 S21: -0.1947 S22: -0.0172 S23: -0.2564 REMARK 3 S31: 0.3001 S32: -0.2250 S33: -0.1815 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 82:112) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2673 -11.9277 10.9860 REMARK 3 T TENSOR REMARK 3 T11: 0.1406 T22: 0.1655 REMARK 3 T33: 0.0911 T12: 0.0349 REMARK 3 T13: 0.0215 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 1.0915 L22: 0.6494 REMARK 3 L33: 0.7103 L12: -0.5530 REMARK 3 L13: -0.3807 L23: -0.4446 REMARK 3 S TENSOR REMARK 3 S11: 0.1572 S12: 0.1193 S13: -0.2812 REMARK 3 S21: -0.0590 S22: -0.0808 S23: -0.0114 REMARK 3 S31: 0.2046 S32: 0.1162 S33: -0.0519 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 113:125) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0731 -7.6371 22.0202 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.0723 REMARK 3 T33: 0.1008 T12: -0.0011 REMARK 3 T13: 0.0571 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 9.0901 L22: 0.8999 REMARK 3 L33: 1.3504 L12: -1.4523 REMARK 3 L13: 0.2124 L23: 0.1759 REMARK 3 S TENSOR REMARK 3 S11: 0.3374 S12: -0.0541 S13: 1.2291 REMARK 3 S21: 0.0425 S22: -0.1101 S23: -0.1250 REMARK 3 S31: -0.3135 S32: 0.1524 S33: -0.0974 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 126:157) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7033 -8.2518 16.6852 REMARK 3 T TENSOR REMARK 3 T11: 0.1337 T22: 0.2206 REMARK 3 T33: 0.2727 T12: 0.0650 REMARK 3 T13: 0.0417 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 2.2573 L22: 0.6762 REMARK 3 L33: 3.4303 L12: 0.1417 REMARK 3 L13: 0.5896 L23: 1.8390 REMARK 3 S TENSOR REMARK 3 S11: -0.1663 S12: -0.1779 S13: 0.4117 REMARK 3 S21: 0.0814 S22: 0.0563 S23: 0.0173 REMARK 3 S31: -0.3661 S32: -0.6003 S33: -0.0672 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 158:202) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7207 -17.3783 7.2518 REMARK 3 T TENSOR REMARK 3 T11: 0.3966 T22: 0.1167 REMARK 3 T33: 0.1556 T12: 0.0744 REMARK 3 T13: 0.0297 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 1.1635 L22: 0.3219 REMARK 3 L33: 3.4701 L12: 0.0256 REMARK 3 L13: -0.2297 L23: 1.1415 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: -0.0136 S13: -0.1244 REMARK 3 S21: -0.1424 S22: 0.2058 S23: -0.0512 REMARK 3 S31: 0.3422 S32: -0.0537 S33: -0.0097 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 203:218) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5745 -14.7058 -3.9191 REMARK 3 T TENSOR REMARK 3 T11: 0.3419 T22: 0.0974 REMARK 3 T33: 0.1372 T12: 0.1171 REMARK 3 T13: 0.0647 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 0.5985 L22: 3.0894 REMARK 3 L33: 9.7010 L12: -0.7045 REMARK 3 L13: -0.4530 L23: -4.7169 REMARK 3 S TENSOR REMARK 3 S11: -0.3087 S12: -0.1992 S13: 0.0978 REMARK 3 S21: -0.1580 S22: -0.2033 S23: -0.4388 REMARK 3 S31: 0.5322 S32: 0.8110 S33: -0.3680 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 219:233) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5406 -7.8502 -0.4380 REMARK 3 T TENSOR REMARK 3 T11: 0.3201 T22: 0.0406 REMARK 3 T33: 0.1814 T12: -0.0227 REMARK 3 T13: -0.0146 T23: 0.0795 REMARK 3 L TENSOR REMARK 3 L11: 0.8724 L22: 4.4175 REMARK 3 L33: 3.4267 L12: -1.8070 REMARK 3 L13: 1.1241 L23: 2.5611 REMARK 3 S TENSOR REMARK 3 S11: 0.0542 S12: 0.6166 S13: 0.9417 REMARK 3 S21: 0.0686 S22: 0.3777 S23: -0.7964 REMARK 3 S31: 0.1976 S32: 0.5061 S33: 0.2620 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 2:18) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8684 5.4803 -29.3830 REMARK 3 T TENSOR REMARK 3 T11: 0.3734 T22: 0.2375 REMARK 3 T33: 0.1397 T12: 0.0795 REMARK 3 T13: -0.0425 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 1.6744 L22: 0.4272 REMARK 3 L33: 2.7846 L12: -0.4369 REMARK 3 L13: 0.8284 L23: -0.1885 REMARK 3 S TENSOR REMARK 3 S11: -0.2542 S12: 0.2751 S13: -0.2748 REMARK 3 S21: -0.2625 S22: -0.0441 S23: 0.3572 REMARK 3 S31: -0.4215 S32: 0.0621 S33: 0.1450 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 19:50) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5450 2.2842 -23.3806 REMARK 3 T TENSOR REMARK 3 T11: 0.1782 T22: 0.2934 REMARK 3 T33: 0.1018 T12: 0.0564 REMARK 3 T13: 0.0514 T23: 0.0674 REMARK 3 L TENSOR REMARK 3 L11: 2.2566 L22: 1.8577 REMARK 3 L33: 3.3734 L12: -0.5708 REMARK 3 L13: 0.4056 L23: 0.7877 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: -0.0587 S13: -0.1474 REMARK 3 S21: -0.3927 S22: -0.4912 S23: 0.1217 REMARK 3 S31: 0.3918 S32: 0.5365 S33: 0.1618 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 51:66) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8107 14.5048 -21.0905 REMARK 3 T TENSOR REMARK 3 T11: 0.1188 T22: 0.2011 REMARK 3 T33: 0.1731 T12: -0.0341 REMARK 3 T13: 0.0976 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.2826 L22: 1.1957 REMARK 3 L33: 6.5337 L12: -0.8183 REMARK 3 L13: -3.0429 L23: -0.6417 REMARK 3 S TENSOR REMARK 3 S11: 0.2291 S12: -0.4880 S13: 0.2861 REMARK 3 S21: -0.3061 S22: -0.0729 S23: 0.0279 REMARK 3 S31: -0.8593 S32: 1.1659 S33: -0.8088 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 67:81) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4531 17.4578 -13.2278 REMARK 3 T TENSOR REMARK 3 T11: 0.1799 T22: 0.1818 REMARK 3 T33: 0.1249 T12: -0.0844 REMARK 3 T13: 0.0425 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 3.4896 L22: 1.7312 REMARK 3 L33: 0.9977 L12: 0.1540 REMARK 3 L13: 1.9433 L23: 0.9527 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: -0.6180 S13: -0.0156 REMARK 3 S21: -0.3841 S22: 0.1119 S23: 0.0481 REMARK 3 S31: -0.3848 S32: 0.0932 S33: -0.1879 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 82:123) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8779 10.6587 -13.0735 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1119 REMARK 3 T33: 0.0984 T12: -0.0366 REMARK 3 T13: -0.0437 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.4594 L22: 1.8406 REMARK 3 L33: 1.7744 L12: 0.6888 REMARK 3 L13: 0.3026 L23: 0.0505 REMARK 3 S TENSOR REMARK 3 S11: 0.2917 S12: -0.2858 S13: 0.1577 REMARK 3 S21: 0.3412 S22: -0.1095 S23: -0.1230 REMARK 3 S31: -0.0997 S32: 0.1792 S33: -0.0817 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 124:160) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3241 5.6349 -17.1431 REMARK 3 T TENSOR REMARK 3 T11: 0.1806 T22: 0.2153 REMARK 3 T33: 0.1981 T12: -0.0394 REMARK 3 T13: -0.0172 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.4220 L22: 1.2352 REMARK 3 L33: 4.2046 L12: 0.5902 REMARK 3 L13: 0.4780 L23: 2.1185 REMARK 3 S TENSOR REMARK 3 S11: 0.2131 S12: 0.0415 S13: -0.0687 REMARK 3 S21: -0.2405 S22: -0.1748 S23: 0.1609 REMARK 3 S31: 0.7258 S32: -0.5434 S33: -0.0505 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN B AND RESID 161:186) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8646 23.7964 -11.2298 REMARK 3 T TENSOR REMARK 3 T11: 0.3668 T22: 0.2095 REMARK 3 T33: 0.2871 T12: -0.0572 REMARK 3 T13: 0.0426 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 2.1680 L22: -1.3569 REMARK 3 L33: 2.9903 L12: -1.2859 REMARK 3 L13: 0.2028 L23: 2.1392 REMARK 3 S TENSOR REMARK 3 S11: 0.2531 S12: 0.0533 S13: 0.8731 REMARK 3 S21: -0.3053 S22: 0.2634 S23: -0.2059 REMARK 3 S31: -0.7761 S32: -0.0087 S33: -0.0338 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN B AND RESID 187:202) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3911 8.8302 5.6589 REMARK 3 T TENSOR REMARK 3 T11: 0.4989 T22: 0.1101 REMARK 3 T33: 0.3590 T12: 0.0560 REMARK 3 T13: 0.0569 T23: 0.0457 REMARK 3 L TENSOR REMARK 3 L11: 0.7971 L22: -0.2173 REMARK 3 L33: 1.3675 L12: -0.2896 REMARK 3 L13: -0.2924 L23: -0.0187 REMARK 3 S TENSOR REMARK 3 S11: -0.2589 S12: 0.5614 S13: -0.3106 REMARK 3 S21: -0.1555 S22: -0.0688 S23: 0.3046 REMARK 3 S31: 1.0926 S32: -0.4680 S33: -0.0089 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN B AND RESID 203:218) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5084 18.1453 4.9732 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.1186 REMARK 3 T33: 0.1826 T12: -0.0363 REMARK 3 T13: -0.0385 T23: -0.0612 REMARK 3 L TENSOR REMARK 3 L11: 0.8201 L22: 1.2931 REMARK 3 L33: 1.4328 L12: 1.0463 REMARK 3 L13: 0.4727 L23: 0.1977 REMARK 3 S TENSOR REMARK 3 S11: 0.1127 S12: -0.1015 S13: -0.3388 REMARK 3 S21: 0.4491 S22: -0.0204 S23: -0.5486 REMARK 3 S31: -0.5199 S32: 0.3900 S33: -0.0259 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN B AND RESID 219:233) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1784 10.9244 1.7369 REMARK 3 T TENSOR REMARK 3 T11: 0.1366 T22: 0.0200 REMARK 3 T33: 0.3386 T12: 0.0701 REMARK 3 T13: -0.0407 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: -1.6624 L22: 2.8589 REMARK 3 L33: 6.3641 L12: -0.1544 REMARK 3 L13: 0.6958 L23: 1.8370 REMARK 3 S TENSOR REMARK 3 S11: 0.4288 S12: 0.1157 S13: -0.2105 REMARK 3 S21: -0.2763 S22: 0.5276 S23: -0.4063 REMARK 3 S31: 0.2909 S32: 0.8527 S33: 0.3677 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TLS WAS USED IN REFINEMENT REMARK 4 REMARK 4 3EFS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049268. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28400 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22163 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 39.618 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09700 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42300 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1WPY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 0.2M AMMONIUM SULPHATE, 15% REMARK 280 MPEG 5000, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.61250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.63900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.84750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.63900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.61250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.84750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 3 -36.41 -145.23 REMARK 500 SER A 13 124.93 -174.07 REMARK 500 LEU A 41 43.45 -144.90 REMARK 500 ASN A 65 34.34 -97.41 REMARK 500 LEU A 66 -71.56 -74.76 REMARK 500 ASN A 95 72.47 -155.08 REMARK 500 GLN A 100 -97.93 68.22 REMARK 500 LYS A 113 92.38 60.44 REMARK 500 LYS A 171 -140.13 -114.50 REMARK 500 LYS B 44 94.63 -68.09 REMARK 500 ASN B 95 41.64 -161.46 REMARK 500 GLN B 100 -114.16 63.69 REMARK 500 LYS B 113 -86.92 56.83 REMARK 500 VAL B 124 -70.26 -112.06 REMARK 500 LYS B 171 -128.22 -98.52 REMARK 500 THR B 216 -165.71 -106.74 REMARK 500 GLU B 218 56.87 -109.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BTN B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WPY RELATED DB: PDB REMARK 900 RELATED ID: 2DTO RELATED DB: PDB REMARK 900 RELATED ID: 2EAY RELATED DB: PDB REMARK 900 RELATED ID: 3EFR RELATED DB: PDB DBREF 3EFS A 1 233 UNP O66837 O66837_AQUAE 1 233 DBREF 3EFS B 1 233 UNP O66837 O66837_AQUAE 1 233 SEQADV 3EFS ARG A 109 UNP O66837 CYS 109 CONFLICT SEQADV 3EFS ARG B 109 UNP O66837 CYS 109 CONFLICT SEQRES 1 A 233 MET PHE LYS ASN LEU ILE TRP LEU LYS GLU VAL ASP SER SEQRES 2 A 233 THR GLN GLU ARG LEU LYS GLU TRP ASN VAL SER TYR GLY SEQRES 3 A 233 THR ALA LEU VAL ALA ASP ARG GLN THR LYS GLY ARG GLY SEQRES 4 A 233 ARG LEU GLY ARG LYS TRP LEU SER GLN GLU GLY GLY LEU SEQRES 5 A 233 TYR PHE SER PHE LEU LEU ASN PRO LYS GLU PHE GLU ASN SEQRES 6 A 233 LEU LEU GLN LEU PRO LEU VAL LEU GLY LEU SER VAL SER SEQRES 7 A 233 GLU ALA LEU GLU GLU ILE THR GLU ILE PRO PHE SER LEU SEQRES 8 A 233 LYS TRP PRO ASN ASP VAL TYR PHE GLN GLU LYS LYS VAL SEQRES 9 A 233 SER GLY VAL LEU ARG GLU LEU SER LYS ASP LYS LEU ILE SEQRES 10 A 233 VAL GLY ILE GLY ILE ASN VAL ASN GLN ARG GLU ILE PRO SEQRES 11 A 233 GLU GLU ILE LYS ASP ARG ALA THR THR LEU TYR GLU ILE SEQRES 12 A 233 THR GLY LYS ASP TRP ASP ARG LYS GLU VAL LEU LEU LYS SEQRES 13 A 233 VAL LEU LYS ARG ILE SER GLU ASN LEU LYS LYS PHE LYS SEQRES 14 A 233 GLU LYS SER PHE LYS GLU PHE LYS GLY LYS ILE GLU SER SEQRES 15 A 233 LYS MET LEU TYR LEU GLY GLU GLU VAL LYS LEU LEU GLY SEQRES 16 A 233 GLU GLY LYS ILE THR GLY LYS LEU VAL GLY LEU SER GLU SEQRES 17 A 233 LYS GLY GLY ALA LEU ILE LEU THR GLU GLU GLY ILE LYS SEQRES 18 A 233 GLU ILE LEU SER GLY GLU PHE SER LEU ARG ARG SER SEQRES 1 B 233 MET PHE LYS ASN LEU ILE TRP LEU LYS GLU VAL ASP SER SEQRES 2 B 233 THR GLN GLU ARG LEU LYS GLU TRP ASN VAL SER TYR GLY SEQRES 3 B 233 THR ALA LEU VAL ALA ASP ARG GLN THR LYS GLY ARG GLY SEQRES 4 B 233 ARG LEU GLY ARG LYS TRP LEU SER GLN GLU GLY GLY LEU SEQRES 5 B 233 TYR PHE SER PHE LEU LEU ASN PRO LYS GLU PHE GLU ASN SEQRES 6 B 233 LEU LEU GLN LEU PRO LEU VAL LEU GLY LEU SER VAL SER SEQRES 7 B 233 GLU ALA LEU GLU GLU ILE THR GLU ILE PRO PHE SER LEU SEQRES 8 B 233 LYS TRP PRO ASN ASP VAL TYR PHE GLN GLU LYS LYS VAL SEQRES 9 B 233 SER GLY VAL LEU ARG GLU LEU SER LYS ASP LYS LEU ILE SEQRES 10 B 233 VAL GLY ILE GLY ILE ASN VAL ASN GLN ARG GLU ILE PRO SEQRES 11 B 233 GLU GLU ILE LYS ASP ARG ALA THR THR LEU TYR GLU ILE SEQRES 12 B 233 THR GLY LYS ASP TRP ASP ARG LYS GLU VAL LEU LEU LYS SEQRES 13 B 233 VAL LEU LYS ARG ILE SER GLU ASN LEU LYS LYS PHE LYS SEQRES 14 B 233 GLU LYS SER PHE LYS GLU PHE LYS GLY LYS ILE GLU SER SEQRES 15 B 233 LYS MET LEU TYR LEU GLY GLU GLU VAL LYS LEU LEU GLY SEQRES 16 B 233 GLU GLY LYS ILE THR GLY LYS LEU VAL GLY LEU SER GLU SEQRES 17 B 233 LYS GLY GLY ALA LEU ILE LEU THR GLU GLU GLY ILE LYS SEQRES 18 B 233 GLU ILE LEU SER GLY GLU PHE SER LEU ARG ARG SER HET ATP A1001 31 HET BTN A2001 16 HET SO4 A2002 5 HET SO4 A2003 5 HET ATP B1001 31 HET BTN B2001 16 HET SO4 B2002 5 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM BTN BIOTIN HETNAM SO4 SULFATE ION FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 BTN 2(C10 H16 N2 O3 S) FORMUL 5 SO4 3(O4 S 2-) FORMUL 10 HOH *187(H2 O) HELIX 1 1 SER A 13 TRP A 21 1 9 HELIX 2 2 LEU A 67 GLU A 86 1 20 HELIX 3 3 PRO A 130 ASP A 135 1 6 HELIX 4 4 THR A 139 GLY A 145 1 7 HELIX 5 5 ASP A 149 GLU A 170 1 22 HELIX 6 6 PHE A 173 MET A 184 1 12 HELIX 7 7 SER B 13 TRP B 21 1 9 HELIX 8 8 LEU B 67 GLU B 86 1 20 HELIX 9 9 THR B 139 GLY B 145 1 7 HELIX 10 10 ASP B 149 LYS B 171 1 23 HELIX 11 11 PHE B 173 LYS B 183 1 11 SHEET 1 A 7 ASN A 4 VAL A 11 0 SHEET 2 A 7 THR A 27 GLN A 34 1 O VAL A 30 N ILE A 6 SHEET 3 A 7 LEU A 52 LEU A 58 -1 O SER A 55 N LEU A 29 SHEET 4 A 7 LEU A 116 ILE A 122 -1 O ILE A 122 N LEU A 52 SHEET 5 A 7 LYS A 102 LEU A 111 -1 N LEU A 108 O GLY A 119 SHEET 6 A 7 ASP A 96 PHE A 99 -1 N PHE A 99 O LYS A 102 SHEET 7 A 7 SER A 90 LYS A 92 -1 N SER A 90 O TYR A 98 SHEET 1 B 5 GLY A 219 ILE A 223 0 SHEET 2 B 5 ALA A 212 THR A 216 -1 N ILE A 214 O LYS A 221 SHEET 3 B 5 LYS A 198 LEU A 206 -1 N LYS A 202 O LEU A 215 SHEET 4 B 5 GLU A 190 LEU A 194 -1 N VAL A 191 O GLY A 201 SHEET 5 B 5 SER A 229 ARG A 232 -1 O SER A 229 N LEU A 194 SHEET 1 C 7 ASN B 4 LEU B 8 0 SHEET 2 C 7 THR B 27 ALA B 31 1 O VAL B 30 N LEU B 8 SHEET 3 C 7 LEU B 52 LEU B 58 -1 O SER B 55 N LEU B 29 SHEET 4 C 7 LYS B 115 ILE B 122 -1 O ILE B 120 N PHE B 54 SHEET 5 C 7 LYS B 102 SER B 112 -1 N GLU B 110 O ILE B 117 SHEET 6 C 7 ASP B 96 PHE B 99 -1 N PHE B 99 O LYS B 102 SHEET 7 C 7 SER B 90 LYS B 92 -1 N SER B 90 O TYR B 98 SHEET 1 D 5 GLY B 219 ILE B 223 0 SHEET 2 D 5 ALA B 212 THR B 216 -1 N ILE B 214 O LYS B 221 SHEET 3 D 5 LYS B 198 LEU B 206 -1 N LYS B 202 O LEU B 215 SHEET 4 D 5 GLU B 190 LEU B 194 -1 N VAL B 191 O GLY B 201 SHEET 5 D 5 SER B 229 ARG B 232 -1 O ARG B 231 N LYS B 192 CISPEP 1 TRP A 93 PRO A 94 0 1.42 CISPEP 2 TRP B 93 PRO B 94 0 2.16 SITE 1 AC1 18 ARG A 40 ARG A 43 LYS A 44 TRP A 45 SITE 2 AC1 18 LEU A 46 LYS A 92 TYR A 98 LYS A 103 SITE 3 AC1 18 ASN A 123 ILE A 133 ALA A 137 SER A 229 SITE 4 AC1 18 LEU A 230 ARG A 231 BTN A2001 HOH A2022 SITE 5 AC1 18 LYS B 192 SER B 233 SITE 1 AC2 14 SER A 13 THR A 14 GLN A 15 GLN A 34 SITE 2 AC2 14 GLY A 37 ARG A 38 GLY A 39 ARG A 40 SITE 3 AC2 14 TRP A 45 SER A 55 LYS A 103 ILE A 120 SITE 4 AC2 14 GLY A 121 ATP A1001 SITE 1 AC3 3 ARG A 33 GLN A 48 GLU A 49 SITE 1 AC4 5 LYS A 61 ASN A 125 ARG A 150 HOH A2069 SITE 2 AC4 5 HOH A2079 SITE 1 AC5 14 LYS A 192 SER A 233 ARG B 40 ARG B 43 SITE 2 AC5 14 TRP B 45 LEU B 46 ASP B 96 TYR B 98 SITE 3 AC5 14 LYS B 103 ASN B 123 ALA B 137 SER B 229 SITE 4 AC5 14 BTN B2001 HOH B2057 SITE 1 AC6 16 SER B 13 THR B 14 GLN B 15 GLN B 34 SITE 2 AC6 16 GLY B 37 ARG B 38 GLY B 39 ARG B 40 SITE 3 AC6 16 TRP B 45 PHE B 54 SER B 55 LYS B 103 SITE 4 AC6 16 GLY B 106 ILE B 120 GLY B 121 ATP B1001 SITE 1 AC7 3 ARG B 33 GLN B 48 GLU B 49 CRYST1 41.225 81.695 143.278 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024257 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006979 0.00000