HEADER TRANSFERASE 10-SEP-08 3EG4 TITLE CRYSTAL STRUCTURE OF 2,3,4,5-TETRAHYDROPYRIDINE-2-CARBOXYLATE N- TITLE 2 SUCCINYLTRANSFERASE FROM BRUCELLA MELITENSIS BIOVAR ABORTUS 2308 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N- COMPND 3 SUCCINYLTRANSFERASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE, THP COMPND 6 SUCCINYLTRANSFERASE, TETRAHYDROPICOLINATE SUCCINYLASE; COMPND 7 EC: 2.3.1.117; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA SUIS; SOURCE 3 ORGANISM_TAXID: 29461; SOURCE 4 STRAIN: BIOVAR ABORTUS 2308; SOURCE 5 GENE: DAPD, BRA1028; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, TRANSFERASE, N-SUCCINYL-TRANSFERASE, BETA HELIX, KEYWDS 2 ACYLTRANSFERASE, AMINO-ACID BIOSYNTHESIS, CYTOPLASM, DIAMINOPIMELATE KEYWDS 3 BIOSYNTHESIS, LYSINE BIOSYNTHESIS, STRUCTURAL GENOMICS, SEATTLE KEYWDS 4 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 30-AUG-23 3EG4 1 SEQADV REVDAT 2 24-FEB-09 3EG4 1 VERSN REVDAT 1 23-SEP-08 3EG4 0 JRNL AUTH SSGCID JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 2,3,4,5-TETRAHYDROPYRIDINE-2-CARBOXYLATE JRNL TITL 3 N-SUCCINYLTRANSFERASE FROM BRUCELLA MELITENSIS BIOVAR JRNL TITL 4 ABORTUS 2308 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0046 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 21642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.132 REMARK 3 R VALUE (WORKING SET) : 0.130 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1113 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1355 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2102 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.83000 REMARK 3 B22 (A**2) : 0.83000 REMARK 3 B33 (A**2) : -1.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.024 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.023 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.581 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2159 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1461 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2932 ; 1.683 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3566 ; 1.015 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 282 ; 7.096 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;37.168 ;24.157 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 356 ;14.841 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;10.226 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2438 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 429 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1382 ; 0.954 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 577 ; 0.290 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2219 ; 1.573 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 777 ; 2.735 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 711 ; 4.191 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 4 REMARK 4 3EG4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21653 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 25.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : 0.09700 REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44200 REMARK 200 R SYM FOR SHELL (I) : 0.44200 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR, MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BXY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HAMPTON INDEX B11: 2.1M DL MALIC ACID, REMARK 280 PH 7.0, VAPOR DIFFUSION, TEMPERATURE 298K, PH 7.00, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.90400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.57448 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.61000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 33.90400 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 19.57448 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 51.61000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 33.90400 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 19.57448 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.61000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.14897 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 103.22000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 39.14897 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 103.22000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 39.14897 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 103.22000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 33.90400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -58.72345 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 67.80800 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 ALA A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 LEU A -8 REMARK 465 GLU A -7 REMARK 465 ALA A -6 REMARK 465 GLN A -5 REMARK 465 THR A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 37 CG CD OE1 NE2 REMARK 470 GLN A 179 CG CD OE1 NE2 REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 ASP A 284 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 322 O HOH A 444 1.98 REMARK 500 OE1 GLU A 33 O HOH A 338 2.03 REMARK 500 NZ LYS A 220 O HOH A 525 2.05 REMARK 500 O HOH A 303 O HOH A 407 2.11 REMARK 500 OE1 GLN A 53 O HOH A 422 2.14 REMARK 500 O HOH A 449 O HOH A 467 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 28 -138.54 -132.34 REMARK 500 ASP A 55 -20.09 110.41 REMARK 500 ASN A 115 57.92 -118.77 REMARK 500 SER A 121 -4.87 97.77 REMARK 500 LEU A 175 -61.95 -102.61 REMARK 500 ALA A 268 -148.46 -103.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BRABA.00002.A RELATED DB: TARGETDB DBREF 3EG4 A 1 284 UNP Q8FV25 DAPD_BRUSU 1 284 SEQADV 3EG4 MET A -19 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 ALA A -18 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 HIS A -17 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 HIS A -16 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 HIS A -15 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 HIS A -14 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 HIS A -13 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 HIS A -12 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 MET A -11 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 GLY A -10 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 THR A -9 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 LEU A -8 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 GLU A -7 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 ALA A -6 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 GLN A -5 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 THR A -4 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 GLN A -3 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 GLY A -2 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 PRO A -1 UNP Q8FV25 EXPRESSION TAG SEQADV 3EG4 SER A 0 UNP Q8FV25 EXPRESSION TAG SEQRES 1 A 304 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 304 ALA GLN THR GLN GLY PRO SER MET THR LYS PRO ASP LEU SEQRES 3 A 304 ALA SER LEU GLU LYS THR ILE GLU LYS ALA PHE ASP GLU SEQRES 4 A 304 ARG ASP GLY ILE ASN THR ALA THR ARG GLY GLU VAL ARG SEQRES 5 A 304 GLU ALA VAL GLU GLN SER LEU ILE LEU LEU ASP ARG GLY SEQRES 6 A 304 GLU VAL ARG VAL ALA GLU LYS GLN ALA ASP GLY ASN TRP SEQRES 7 A 304 HIS VAL ASN GLN TRP LEU LYS LYS ALA VAL LEU LEU SER SEQRES 8 A 304 PHE ARG LEU ASN PRO MET GLU VAL ILE LYS GLY GLY PRO SEQRES 9 A 304 GLY GLN SER SER TRP TRP ASP LYS VAL PRO SER LYS PHE SEQRES 10 A 304 ASP GLY TRP THR ALA ASN GLU PHE GLU LYS ALA GLY PHE SEQRES 11 A 304 ARG ALA VAL PRO ASN CYS ILE VAL ARG HIS SER ALA TYR SEQRES 12 A 304 ILE ALA PRO ASN ALA ILE LEU MET PRO SER PHE VAL ASN SEQRES 13 A 304 LEU GLY ALA TYR VAL ASP LYS GLY ALA MET ILE ASP THR SEQRES 14 A 304 TRP ALA THR VAL GLY SER CYS ALA GLN ILE GLY LYS ASN SEQRES 15 A 304 VAL HIS LEU SER GLY GLY VAL GLY ILE GLY GLY VAL LEU SEQRES 16 A 304 GLU PRO MET GLN ALA GLY PRO THR ILE ILE GLU ASP ASN SEQRES 17 A 304 CYS PHE ILE GLY ALA ARG SER GLU VAL VAL GLU GLY CYS SEQRES 18 A 304 ILE VAL ARG GLU GLY SER VAL LEU GLY MET GLY VAL PHE SEQRES 19 A 304 ILE GLY LYS SER THR LYS ILE VAL ASP ARG ALA THR GLY SEQRES 20 A 304 GLU VAL PHE TYR GLY GLU VAL PRO PRO TYR SER VAL VAL SEQRES 21 A 304 VAL ALA GLY THR MET PRO GLY LYS ASN VAL PRO GLY GLU SEQRES 22 A 304 ASN TRP GLY PRO SER LEU TYR CYS ALA VAL ILE VAL LYS SEQRES 23 A 304 ARG ALA ASP GLU LYS THR ARG SER LYS THR SER ILE ASN SEQRES 24 A 304 GLU LEU LEU ARG ASP FORMUL 2 HOH *250(H2 O) HELIX 1 1 LEU A 6 GLU A 19 1 14 HELIX 2 2 ARG A 20 ILE A 23 5 4 HELIX 3 3 ARG A 28 ARG A 44 1 17 HELIX 4 4 ASN A 61 ASN A 75 1 15 HELIX 5 5 GLY A 83 GLN A 86 5 4 HELIX 6 6 THR A 101 GLY A 109 1 9 HELIX 7 7 ASP A 269 THR A 276 1 8 HELIX 8 8 SER A 277 ASP A 284 1 8 SHEET 1 A 2 ALA A 50 LYS A 52 0 SHEET 2 A 2 TRP A 58 VAL A 60 -1 O HIS A 59 N GLU A 51 SHEET 1 B 2 GLU A 78 LYS A 81 0 SHEET 2 B 2 SER A 88 ASP A 91 -1 O TRP A 89 N ILE A 80 SHEET 1 C10 ARG A 111 ALA A 112 0 SHEET 2 C10 ILE A 129 LEU A 130 1 O LEU A 130 N ARG A 111 SHEET 3 C10 MET A 146 ILE A 147 1 O ILE A 147 N ILE A 129 SHEET 4 C10 HIS A 164 LEU A 165 1 O LEU A 165 N MET A 146 SHEET 5 C10 PHE A 190 ILE A 191 1 O ILE A 191 N HIS A 164 SHEET 6 C10 VAL A 208 LEU A 209 1 O LEU A 209 N PHE A 190 SHEET 7 C10 SER A 238 PRO A 246 1 O SER A 238 N VAL A 208 SHEET 8 C10 SER A 258 ARG A 267 -1 O VAL A 263 N VAL A 241 SHEET 9 C10 ILE A 221 ASP A 223 1 N VAL A 222 O ALA A 262 SHEET 10 C10 VAL A 229 PHE A 230 -1 O PHE A 230 N ILE A 221 SHEET 1 D 6 ILE A 117 VAL A 118 0 SHEET 2 D 6 SER A 133 VAL A 135 1 O SER A 133 N ILE A 117 SHEET 3 D 6 ALA A 151 VAL A 153 1 O VAL A 153 N PHE A 134 SHEET 4 D 6 GLY A 170 ILE A 171 1 O ILE A 171 N THR A 152 SHEET 5 D 6 GLU A 196 VAL A 197 1 O VAL A 197 N GLY A 170 SHEET 6 D 6 PHE A 214 ILE A 215 1 O ILE A 215 N GLU A 196 SHEET 1 E 6 TYR A 123 ILE A 124 0 SHEET 2 E 6 TYR A 140 VAL A 141 1 O VAL A 141 N TYR A 123 SHEET 3 E 6 GLN A 158 ILE A 159 1 O ILE A 159 N TYR A 140 SHEET 4 E 6 ILE A 184 ILE A 185 1 O ILE A 185 N GLN A 158 SHEET 5 E 6 ILE A 202 VAL A 203 1 O VAL A 203 N ILE A 184 SHEET 6 E 6 GLU A 233 VAL A 234 1 O VAL A 234 N ILE A 202 CISPEP 1 PRO A 114 ASN A 115 0 6.78 CISPEP 2 GLU A 176 PRO A 177 0 3.77 CRYST1 67.808 67.808 154.830 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014748 0.008515 0.000000 0.00000 SCALE2 0.000000 0.017029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006459 0.00000