HEADER HYDROLASE 22-SEP-08 3ELO TITLE CRYSTAL STRUCTURE OF HUMAN PANCREATIC PROPHOSPHOLIPASE A2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPASE A2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOSPHATIDYLCHOLINE 2-ACYLHYDROLASE, GROUP IB PHOSPHOLIPASE COMPND 5 A2; COMPND 6 EC: 3.1.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLA2G1B; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPIC9K KEYWDS HUMAN PANCREATIC PROPHOSPHOLIPASE A2, TRIMERIC, HYDROLASE, LIPID KEYWDS 2 DEGRADATION, METAL-BINDING, SECRETED EXPDTA X-RAY DIFFRACTION AUTHOR W.XU,L.YI,Y.FENG,L.CHEN,J.LIU REVDAT 4 05-FEB-14 3ELO 1 JRNL REVDAT 3 13-JUL-11 3ELO 1 VERSN REVDAT 2 21-APR-09 3ELO 1 JRNL REVDAT 1 14-APR-09 3ELO 0 JRNL AUTH W.XU,L.YI,Y.FENG,L.CHEN,J.LIU JRNL TITL STRUCTURAL INSIGHT INTO THE ACTIVATION MECHANISM OF HUMAN JRNL TITL 2 PANCREATIC PROPHOSPHOLIPASE A2 JRNL REF J.BIOL.CHEM. V. 284 16659 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19297324 JRNL DOI 10.1074/JBC.M808029200 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 810 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1111 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1033 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.326 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1093 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 756 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1486 ; 1.365 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1835 ; 0.936 ; 3.015 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 140 ; 5.789 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;40.676 ;25.200 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 185 ;11.998 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 9.309 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 151 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1235 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 215 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 678 ; 0.524 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 272 ; 0.151 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1093 ; 0.915 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 415 ; 1.611 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 390 ; 2.571 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -6 A 0 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7451 -28.8047 -6.1866 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.2091 REMARK 3 T33: 0.0889 T12: 0.0101 REMARK 3 T13: 0.0533 T23: -0.0765 REMARK 3 L TENSOR REMARK 3 L11: 6.9297 L22: 7.1980 REMARK 3 L33: 5.3118 L12: 0.0801 REMARK 3 L13: 1.9794 L23: -5.1975 REMARK 3 S TENSOR REMARK 3 S11: -0.0948 S12: 1.1781 S13: -0.4957 REMARK 3 S21: -0.6798 S22: -0.1368 S23: -0.6038 REMARK 3 S31: 0.6216 S32: 0.5193 S33: 0.2315 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 10 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1289 -25.2248 5.8264 REMARK 3 T TENSOR REMARK 3 T11: 0.0413 T22: 0.0603 REMARK 3 T33: 0.0479 T12: -0.0040 REMARK 3 T13: -0.0007 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.6998 L22: 1.2357 REMARK 3 L33: 2.3938 L12: -0.5508 REMARK 3 L13: -1.2868 L23: 0.8899 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: -0.0765 S13: 0.0154 REMARK 3 S21: 0.0687 S22: 0.0183 S23: -0.0912 REMARK 3 S31: 0.0203 S32: 0.1337 S33: -0.0112 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 22 REMARK 3 ORIGIN FOR THE GROUP (A): -13.3385 -31.1879 8.1476 REMARK 3 T TENSOR REMARK 3 T11: 0.0494 T22: 0.0406 REMARK 3 T33: 0.0477 T12: 0.0172 REMARK 3 T13: 0.0218 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.6096 L22: 1.6519 REMARK 3 L33: 5.0320 L12: 0.8233 REMARK 3 L13: 0.0214 L23: 2.4793 REMARK 3 S TENSOR REMARK 3 S11: -0.0352 S12: -0.1563 S13: -0.1636 REMARK 3 S21: 0.1973 S22: -0.0500 S23: -0.0173 REMARK 3 S31: 0.4102 S32: 0.0563 S33: 0.0852 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): -18.4974 -30.7260 -6.9702 REMARK 3 T TENSOR REMARK 3 T11: 0.0320 T22: 0.0475 REMARK 3 T33: 0.0477 T12: -0.0064 REMARK 3 T13: 0.0064 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.6379 L22: 1.0738 REMARK 3 L33: 3.9264 L12: -0.2426 REMARK 3 L13: 1.1853 L23: -0.4842 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: 0.0835 S13: -0.0196 REMARK 3 S21: -0.0091 S22: 0.0036 S23: -0.0114 REMARK 3 S31: -0.0371 S32: 0.0470 S33: 0.0042 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 54 REMARK 3 ORIGIN FOR THE GROUP (A): -19.5381 -23.3700 -4.5840 REMARK 3 T TENSOR REMARK 3 T11: 0.0384 T22: 0.0692 REMARK 3 T33: 0.0482 T12: 0.0132 REMARK 3 T13: -0.0066 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.6069 L22: 1.5001 REMARK 3 L33: 0.7535 L12: 0.8899 REMARK 3 L13: -0.1964 L23: 0.3324 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: 0.1193 S13: 0.0765 REMARK 3 S21: -0.0653 S22: 0.0248 S23: 0.0607 REMARK 3 S31: -0.0381 S32: -0.0706 S33: -0.0024 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 55 A 60 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9748 -12.7195 -10.1360 REMARK 3 T TENSOR REMARK 3 T11: 0.0811 T22: 0.0650 REMARK 3 T33: 0.0682 T12: -0.0055 REMARK 3 T13: 0.0120 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 11.1237 L22: 3.0880 REMARK 3 L33: 4.6658 L12: -1.0881 REMARK 3 L13: -0.9397 L23: 0.1906 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: 0.6268 S13: 0.2746 REMARK 3 S21: -0.3428 S22: 0.1343 S23: 0.0877 REMARK 3 S31: -0.2595 S32: -0.1192 S33: -0.0904 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 61 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): -0.9074 -21.8424 -5.9617 REMARK 3 T TENSOR REMARK 3 T11: 0.0207 T22: 0.0436 REMARK 3 T33: 0.0604 T12: 0.0135 REMARK 3 T13: 0.0234 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.2376 L22: 4.1104 REMARK 3 L33: 2.2133 L12: 0.6356 REMARK 3 L13: 0.1853 L23: -1.7357 REMARK 3 S TENSOR REMARK 3 S11: -0.0270 S12: 0.0112 S13: -0.0244 REMARK 3 S21: -0.0995 S22: -0.0099 S23: -0.1327 REMARK 3 S31: -0.0079 S32: 0.0389 S33: 0.0370 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): -8.4008 -14.4080 9.8012 REMARK 3 T TENSOR REMARK 3 T11: 0.0601 T22: 0.0362 REMARK 3 T33: 0.0267 T12: 0.0053 REMARK 3 T13: -0.0112 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.9690 L22: 1.9497 REMARK 3 L33: 5.0889 L12: 0.2947 REMARK 3 L13: -1.9550 L23: -0.4043 REMARK 3 S TENSOR REMARK 3 S11: 0.0309 S12: -0.0036 S13: 0.0829 REMARK 3 S21: 0.0107 S22: -0.0643 S23: -0.0908 REMARK 3 S31: -0.4321 S32: 0.0902 S33: 0.0334 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 88 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): -11.7229 -15.8648 2.1135 REMARK 3 T TENSOR REMARK 3 T11: 0.0494 T22: 0.0521 REMARK 3 T33: 0.0561 T12: 0.0179 REMARK 3 T13: -0.0004 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.5327 L22: 2.2199 REMARK 3 L33: 1.2942 L12: 1.4304 REMARK 3 L13: -0.5277 L23: -0.4444 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: -0.0012 S13: 0.1115 REMARK 3 S21: 0.0131 S22: -0.0381 S23: -0.0232 REMARK 3 S31: -0.0753 S32: 0.0230 S33: 0.0022 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): -22.8784 -34.6483 1.7245 REMARK 3 T TENSOR REMARK 3 T11: 0.0374 T22: 0.0489 REMARK 3 T33: 0.0530 T12: -0.0153 REMARK 3 T13: 0.0140 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 3.3220 L22: 2.3671 REMARK 3 L33: 3.0406 L12: -1.7970 REMARK 3 L13: -1.3007 L23: 2.3224 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: -0.0690 S13: -0.0510 REMARK 3 S21: 0.0232 S22: -0.0086 S23: -0.0241 REMARK 3 S31: 0.0814 S32: -0.0794 S33: -0.0086 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): -23.9169 -37.1271 -13.5962 REMARK 3 T TENSOR REMARK 3 T11: 0.0483 T22: 0.0548 REMARK 3 T33: 0.0470 T12: 0.0020 REMARK 3 T13: -0.0042 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.9358 L22: 7.9472 REMARK 3 L33: 8.7661 L12: -1.6425 REMARK 3 L13: 2.1650 L23: -5.5485 REMARK 3 S TENSOR REMARK 3 S11: 0.1565 S12: 0.0400 S13: -0.2640 REMARK 3 S21: -0.1998 S22: -0.0983 S23: 0.1431 REMARK 3 S31: 0.4825 S32: 0.0670 S33: -0.0582 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS, U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3ELO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-SEP-08. REMARK 100 THE RCSB ID CODE IS RCSB049478. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OXFORD DIFFRACTION ENHANCED ULTRA REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : OXFORD RUBY CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16060 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 18.683 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 7.8790 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.51300 REMARK 200 R SYM FOR SHELL (I) : 0.51300 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, 0.2M LITHIUM SULFATE, 33% REMARK 280 PEG 4000, PH 8.4, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.31550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.31550 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.31550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -28.27450 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -48.97287 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 28.27450 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -48.97287 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 127 LIES ON A SPECIAL POSITION. REMARK 375 O3 SO4 A 127 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 158 O HOH A 279 1.89 REMARK 500 O HOH A 165 O HOH A 212 1.94 REMARK 500 OG SER A 60 O HOH A 170 2.07 REMARK 500 O HOH A 165 O HOH A 241 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 63 -7.30 81.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 127 DBREF 3ELO A -6 126 UNP P04054 PA21B_HUMAN 16 148 SEQRES 1 A 133 ASP SER GLY ILE SER PRO ARG ALA VAL TRP GLN PHE ARG SEQRES 2 A 133 LYS MET ILE LYS CYS VAL ILE PRO GLY SER ASP PRO PHE SEQRES 3 A 133 LEU GLU TYR ASN ASN TYR GLY CYS TYR CYS GLY LEU GLY SEQRES 4 A 133 GLY SER GLY THR PRO VAL ASP GLU LEU ASP LYS CYS CYS SEQRES 5 A 133 GLN THR HIS ASP ASN CYS TYR ASP GLN ALA LYS LYS LEU SEQRES 6 A 133 ASP SER CYS LYS PHE LEU LEU ASP ASN PRO TYR THR HIS SEQRES 7 A 133 THR TYR SER TYR SER CYS SER GLY SER ALA ILE THR CYS SEQRES 8 A 133 SER SER LYS ASN LYS GLU CYS GLU ALA PHE ILE CYS ASN SEQRES 9 A 133 CYS ASP ARG ASN ALA ALA ILE CYS PHE SER LYS ALA PRO SEQRES 10 A 133 TYR ASN LYS ALA HIS LYS ASN LEU ASP THR LYS LYS TYR SEQRES 11 A 133 CYS GLN SER HET SO4 A 127 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *164(H2 O) HELIX 1 1 SER A -2 ALA A 1 5 4 HELIX 2 2 VAL A 2 ILE A 9 1 8 HELIX 3 3 LYS A 10 VAL A 12 5 3 HELIX 4 4 ASP A 17 ASN A 23 5 7 HELIX 5 5 ASP A 39 LYS A 56 1 18 HELIX 6 6 LYS A 57 LYS A 62 5 6 HELIX 7 7 LYS A 89 ALA A 109 1 21 HELIX 8 8 ASN A 112 LYS A 116 5 5 HELIX 9 9 ASP A 119 CYS A 124 1 6 SHEET 1 A 2 TYR A 75 SER A 78 0 SHEET 2 A 2 ALA A 81 CYS A 84 -1 O THR A 83 N SER A 76 SSBOND 1 CYS A 11 CYS A 77 1555 1555 2.05 SSBOND 2 CYS A 27 CYS A 124 1555 1555 2.01 SSBOND 3 CYS A 29 CYS A 45 1555 1555 2.02 SSBOND 4 CYS A 44 CYS A 105 1555 1555 2.01 SSBOND 5 CYS A 51 CYS A 98 1555 1555 2.03 SSBOND 6 CYS A 61 CYS A 91 1555 1555 2.00 SSBOND 7 CYS A 84 CYS A 96 1555 1555 2.03 SITE 1 AC1 4 TRP A 3 ARG A 6 TYR A 69 HOH A 174 CRYST1 56.549 56.549 60.631 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017684 0.010210 0.000000 0.00000 SCALE2 0.000000 0.020419 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016493 0.00000