HEADER IMMUNE SYSTEM 26-SEP-08 3EO0 TITLE STRUCTURE OF THE TRANSFORMING GROWTH FACTOR-BETA NEUTRALIZING ANTIBODY TITLE 2 GC-1008 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GC-1008 FAB LIGHT CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GC-1008 FAB HEAVY CHAIN; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: NS0; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_TAXID: 10090; SOURCE 10 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: NS0 KEYWDS CYTOKINE NEUTRALIZING ANTIBODY, FAB FRAGMENT, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR C.GRUETTER,M.G.GRUETTER REVDAT 5 01-NOV-23 3EO0 1 REMARK REVDAT 4 25-OCT-17 3EO0 1 REMARK REVDAT 3 13-JUL-11 3EO0 1 VERSN REVDAT 2 06-JAN-09 3EO0 1 JRNL REVDAT 1 02-DEC-08 3EO0 0 JRNL AUTH T.WILKINSON,R.TURNER,S.PODICHETTY,D.FINCH,M.MCCOURT, JRNL AUTH 2 S.LONING,L.JERMUTUS JRNL TITL A CYTOKINE-NEUTRALIZING ANTIBODY AS A STRUCTURAL MIMETIC OF JRNL TITL 2 2 RECEPTOR INTERACTIONS JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 20251 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 19073914 JRNL DOI 10.1073/PNAS.0807200106 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 130868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1286 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7953 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6564 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 767 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -0.94000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.998 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6845 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9368 ; 1.524 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 926 ; 7.351 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 251 ;33.806 ;24.263 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1092 ;12.371 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;17.037 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1076 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5152 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2980 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4717 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 658 ; 0.141 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.179 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 52 ; 0.165 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4531 ; 1.414 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7191 ; 2.174 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2654 ; 2.914 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2147 ; 4.122 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7185 ; 1.984 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 770 ; 6.899 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6667 ; 5.685 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3EO0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000049559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97640 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : BENT MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 130926 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.30600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2V7N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG4000, 0.1M MOPS, PH7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.50450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 221 REMARK 465 TYR B 222 REMARK 465 GLY B 223 REMARK 465 PRO B 224 REMARK 465 PRO B 225 REMARK 465 LYS D 221 REMARK 465 TYR D 222 REMARK 465 GLY D 223 REMARK 465 PRO D 224 REMARK 465 PRO D 225 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 124 CD OE1 OE2 REMARK 480 GLU A 214 CD OE1 OE2 REMARK 480 GLN B 1 CD OE1 NE2 REMARK 480 ARG B 136 CG CD NE CZ NH1 NH2 REMARK 480 THR B 138 CB OG1 CG2 REMARK 480 SER B 139 CB OG REMARK 480 PRO B 220 CB CG REMARK 480 GLU C 214 CD OE1 OE2 REMARK 480 GLN D 1 OE1 NE2 REMARK 480 ARG D 136 CG CD NE CZ NH1 NH2 REMARK 480 THR D 138 CB OG1 CG2 REMARK 480 SER D 139 CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 96 CA - CB - SG ANGL. DEV. = 9.4 DEGREES REMARK 500 CYS B 147 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 LEU D 185 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 32 -55.60 -120.78 REMARK 500 SER A 32 -53.03 -122.24 REMARK 500 TYR A 33 49.12 -78.99 REMARK 500 ALA A 52 -35.68 70.86 REMARK 500 ALA A 85 -178.85 -174.27 REMARK 500 ASN A 153 -2.78 64.99 REMARK 500 PHE B 153 137.00 -170.12 REMARK 500 SER C 32 -153.05 -136.37 REMARK 500 SER C 32 -155.98 -133.81 REMARK 500 ALA C 52 -35.01 65.86 REMARK 500 ALA C 85 -177.76 -173.95 REMARK 500 ASN C 153 -1.56 64.33 REMARK 500 ARG D 136 109.40 -160.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 226 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 227 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 226 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 227 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EO1 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN REMARK 999 DOES NOT CURRENTLY EXIST. DBREF 3EO0 A 1 215 PDB 3EO0 3EO0 1 215 DBREF 3EO0 B 1 225 PDB 3EO0 3EO0 1 225 DBREF 3EO0 C 1 215 PDB 3EO0 3EO0 1 215 DBREF 3EO0 D 1 225 PDB 3EO0 3EO0 1 225 SEQRES 1 A 215 GLU THR VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 A 215 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 A 215 GLN SER LEU GLY SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 A 215 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 A 215 SER SER ARG ALA PRO GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 A 215 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 A 215 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 A 215 TYR ALA ASP SER PRO ILE THR PHE GLY GLN GLY THR ARG SEQRES 9 A 215 LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 A 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 A 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 A 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 A 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 A 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 A 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 A 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 A 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 B 225 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 B 225 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 B 225 TYR THR PHE SER SER ASN VAL ILE SER TRP VAL ARG GLN SEQRES 4 B 225 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY VAL ILE SEQRES 5 B 225 PRO ILE VAL ASP ILE ALA ASN TYR ALA GLN ARG PHE LYS SEQRES 6 B 225 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 B 225 THR TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 B 225 ALA VAL TYR TYR CYS ALA SER THR LEU GLY LEU VAL LEU SEQRES 9 B 225 ASP ALA MET ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 B 225 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 B 225 LEU ALA PRO CYS SER ARG SER THR SER GLU SER THR ALA SEQRES 12 B 225 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 B 225 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 B 225 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 B 225 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 B 225 LEU GLY THR LYS THR TYR THR CYS ASN VAL ASP HIS LYS SEQRES 17 B 225 PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SEQRES 18 B 225 TYR GLY PRO PRO SEQRES 1 C 215 GLU THR VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 C 215 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 C 215 GLN SER LEU GLY SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 C 215 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 C 215 SER SER ARG ALA PRO GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 C 215 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 C 215 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 C 215 TYR ALA ASP SER PRO ILE THR PHE GLY GLN GLY THR ARG SEQRES 9 C 215 LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 C 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 C 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 C 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 C 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 C 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 C 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 C 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 C 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 D 225 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 D 225 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 D 225 TYR THR PHE SER SER ASN VAL ILE SER TRP VAL ARG GLN SEQRES 4 D 225 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY VAL ILE SEQRES 5 D 225 PRO ILE VAL ASP ILE ALA ASN TYR ALA GLN ARG PHE LYS SEQRES 6 D 225 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 D 225 THR TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 D 225 ALA VAL TYR TYR CYS ALA SER THR LEU GLY LEU VAL LEU SEQRES 9 D 225 ASP ALA MET ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 D 225 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 D 225 LEU ALA PRO CYS SER ARG SER THR SER GLU SER THR ALA SEQRES 12 D 225 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 D 225 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 D 225 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 D 225 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 D 225 LEU GLY THR LYS THR TYR THR CYS ASN VAL ASP HIS LYS SEQRES 17 D 225 PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SEQRES 18 D 225 TYR GLY PRO PRO HET GOL A 216 6 HET GOL B 226 6 HET GOL B 227 6 HET GOL C 216 6 HET GOL D 226 6 HET GOL D 227 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 6(C3 H8 O3) FORMUL 11 HOH *767(H2 O) HELIX 1 1 GLU A 80 PHE A 84 5 5 HELIX 2 2 SER A 122 SER A 128 1 7 HELIX 3 3 LYS A 184 HIS A 190 1 7 HELIX 4 4 GLU B 74 THR B 76 5 3 HELIX 5 5 ARG B 87 THR B 91 5 5 HELIX 6 6 SER B 163 ALA B 165 5 3 HELIX 7 7 SER B 194 LEU B 196 5 3 HELIX 8 8 LYS B 208 ASN B 211 5 4 HELIX 9 9 GLU C 80 PHE C 84 5 5 HELIX 10 10 SER C 122 LYS C 127 1 6 HELIX 11 11 LYS C 184 HIS C 190 1 7 HELIX 12 12 GLU D 74 THR D 76 5 3 HELIX 13 13 ARG D 87 THR D 91 5 5 HELIX 14 14 SER D 163 ALA D 165 5 3 HELIX 15 15 SER D 194 LEU D 196 5 3 HELIX 16 16 LYS D 208 ASN D 211 5 4 SHEET 1 A 4 LEU A 4 SER A 7 0 SHEET 2 A 4 ALA A 19 ALA A 25 -1 O SER A 22 N SER A 7 SHEET 3 A 4 ASP A 71 ILE A 76 -1 O LEU A 74 N LEU A 21 SHEET 4 A 4 PHE A 63 SER A 68 -1 N SER A 64 O THR A 75 SHEET 1 B 6 THR A 10 LEU A 13 0 SHEET 2 B 6 THR A 103 ILE A 107 1 O ARG A 104 N LEU A 11 SHEET 3 B 6 ALA A 85 GLN A 91 -1 N ALA A 85 O LEU A 105 SHEET 4 B 6 LEU A 34 GLN A 39 -1 N GLN A 39 O VAL A 86 SHEET 5 B 6 ARG A 46 TYR A 50 -1 O LEU A 48 N TRP A 36 SHEET 6 B 6 SER A 54 ARG A 55 -1 O SER A 54 N TYR A 50 SHEET 1 C 4 THR A 10 LEU A 13 0 SHEET 2 C 4 THR A 103 ILE A 107 1 O ARG A 104 N LEU A 11 SHEET 3 C 4 ALA A 85 GLN A 91 -1 N ALA A 85 O LEU A 105 SHEET 4 C 4 THR A 98 PHE A 99 -1 O THR A 98 N GLN A 91 SHEET 1 D 4 SER A 115 PHE A 119 0 SHEET 2 D 4 THR A 130 PHE A 140 -1 O ASN A 138 N SER A 115 SHEET 3 D 4 TYR A 174 SER A 183 -1 O LEU A 180 N VAL A 133 SHEET 4 D 4 SER A 160 VAL A 164 -1 N GLN A 161 O THR A 179 SHEET 1 E 4 ALA A 154 LEU A 155 0 SHEET 2 E 4 LYS A 146 VAL A 151 -1 N VAL A 151 O ALA A 154 SHEET 3 E 4 VAL A 192 THR A 198 -1 O GLU A 196 N GLN A 148 SHEET 4 E 4 VAL A 206 ASN A 211 -1 O VAL A 206 N VAL A 197 SHEET 1 F 4 GLN B 3 GLN B 6 0 SHEET 2 F 4 VAL B 18 SER B 25 -1 O LYS B 23 N VAL B 5 SHEET 3 F 4 THR B 78 LEU B 83 -1 O MET B 81 N VAL B 20 SHEET 4 F 4 VAL B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 G 6 GLU B 10 LYS B 12 0 SHEET 2 G 6 THR B 114 VAL B 118 1 O THR B 117 N GLU B 10 SHEET 3 G 6 ALA B 92 THR B 99 -1 N TYR B 94 O THR B 114 SHEET 4 G 6 ILE B 34 GLN B 39 -1 N SER B 35 O ALA B 97 SHEET 5 G 6 GLU B 46 ILE B 52 -1 O MET B 48 N TRP B 36 SHEET 6 G 6 ILE B 57 TYR B 60 -1 O ASN B 59 N GLY B 50 SHEET 1 H 4 GLU B 10 LYS B 12 0 SHEET 2 H 4 THR B 114 VAL B 118 1 O THR B 117 N GLU B 10 SHEET 3 H 4 ALA B 92 THR B 99 -1 N TYR B 94 O THR B 114 SHEET 4 H 4 MET B 107 TRP B 110 -1 O TYR B 109 N SER B 98 SHEET 1 I 4 SER B 127 LEU B 131 0 SHEET 2 I 4 THR B 142 TYR B 152 -1 O LEU B 148 N PHE B 129 SHEET 3 I 4 TYR B 183 PRO B 192 -1 O LEU B 185 N VAL B 149 SHEET 4 I 4 VAL B 170 THR B 172 -1 N HIS B 171 O VAL B 188 SHEET 1 J 4 SER B 127 LEU B 131 0 SHEET 2 J 4 THR B 142 TYR B 152 -1 O LEU B 148 N PHE B 129 SHEET 3 J 4 TYR B 183 PRO B 192 -1 O LEU B 185 N VAL B 149 SHEET 4 J 4 VAL B 176 LEU B 177 -1 N VAL B 176 O SER B 184 SHEET 1 K 3 THR B 158 TRP B 161 0 SHEET 2 K 3 THR B 202 HIS B 207 -1 O ASN B 204 N SER B 160 SHEET 3 K 3 THR B 212 ARG B 217 -1 O VAL B 214 N VAL B 205 SHEET 1 L 4 LEU C 4 SER C 7 0 SHEET 2 L 4 ALA C 19 ALA C 25 -1 O ARG C 24 N THR C 5 SHEET 3 L 4 ASP C 71 ILE C 76 -1 O LEU C 74 N LEU C 21 SHEET 4 L 4 PHE C 63 SER C 68 -1 N SER C 64 O THR C 75 SHEET 1 M 6 THR C 10 LEU C 13 0 SHEET 2 M 6 THR C 103 ILE C 107 1 O ARG C 104 N LEU C 11 SHEET 3 M 6 ALA C 85 GLN C 91 -1 N ALA C 85 O LEU C 105 SHEET 4 M 6 LEU C 34 GLN C 39 -1 N GLN C 39 O VAL C 86 SHEET 5 M 6 ARG C 46 TYR C 50 -1 O LEU C 48 N TRP C 36 SHEET 6 M 6 SER C 54 ARG C 55 -1 O SER C 54 N TYR C 50 SHEET 1 N 4 THR C 10 LEU C 13 0 SHEET 2 N 4 THR C 103 ILE C 107 1 O ARG C 104 N LEU C 11 SHEET 3 N 4 ALA C 85 GLN C 91 -1 N ALA C 85 O LEU C 105 SHEET 4 N 4 THR C 98 PHE C 99 -1 O THR C 98 N GLN C 91 SHEET 1 O 4 SER C 115 PHE C 119 0 SHEET 2 O 4 THR C 130 PHE C 140 -1 O ASN C 138 N SER C 115 SHEET 3 O 4 TYR C 174 SER C 183 -1 O LEU C 182 N ALA C 131 SHEET 4 O 4 SER C 160 VAL C 164 -1 N GLN C 161 O THR C 179 SHEET 1 P 4 ALA C 154 LEU C 155 0 SHEET 2 P 4 LYS C 146 VAL C 151 -1 N VAL C 151 O ALA C 154 SHEET 3 P 4 VAL C 192 THR C 198 -1 O GLU C 196 N GLN C 148 SHEET 4 P 4 VAL C 206 ASN C 211 -1 O VAL C 206 N VAL C 197 SHEET 1 Q 4 GLN D 3 GLN D 6 0 SHEET 2 Q 4 VAL D 18 SER D 25 -1 O LYS D 23 N VAL D 5 SHEET 3 Q 4 THR D 78 LEU D 83 -1 O MET D 81 N VAL D 20 SHEET 4 Q 4 VAL D 68 ASP D 73 -1 N ASP D 73 O THR D 78 SHEET 1 R 6 GLU D 10 LYS D 12 0 SHEET 2 R 6 THR D 114 VAL D 118 1 O THR D 117 N GLU D 10 SHEET 3 R 6 ALA D 92 THR D 99 -1 N TYR D 94 O THR D 114 SHEET 4 R 6 ILE D 34 GLN D 39 -1 N SER D 35 O ALA D 97 SHEET 5 R 6 GLU D 46 ILE D 52 -1 O MET D 48 N TRP D 36 SHEET 6 R 6 ILE D 57 TYR D 60 -1 O ASN D 59 N GLY D 50 SHEET 1 S 4 GLU D 10 LYS D 12 0 SHEET 2 S 4 THR D 114 VAL D 118 1 O THR D 117 N GLU D 10 SHEET 3 S 4 ALA D 92 THR D 99 -1 N TYR D 94 O THR D 114 SHEET 4 S 4 MET D 107 TRP D 110 -1 O TYR D 109 N SER D 98 SHEET 1 T 4 SER D 127 LEU D 131 0 SHEET 2 T 4 THR D 142 TYR D 152 -1 O LEU D 148 N PHE D 129 SHEET 3 T 4 TYR D 183 PRO D 192 -1 O LEU D 185 N VAL D 149 SHEET 4 T 4 VAL D 170 THR D 172 -1 N HIS D 171 O VAL D 188 SHEET 1 U 4 SER D 127 LEU D 131 0 SHEET 2 U 4 THR D 142 TYR D 152 -1 O LEU D 148 N PHE D 129 SHEET 3 U 4 TYR D 183 PRO D 192 -1 O LEU D 185 N VAL D 149 SHEET 4 U 4 VAL D 176 LEU D 177 -1 N VAL D 176 O SER D 184 SHEET 1 V 3 THR D 158 TRP D 161 0 SHEET 2 V 3 THR D 202 HIS D 207 -1 O ASN D 204 N SER D 160 SHEET 3 V 3 THR D 212 ARG D 217 -1 O VAL D 214 N VAL D 205 SSBOND 1 CYS A 23 CYS A 89 1555 1555 2.63 SSBOND 2 CYS A 135 CYS A 195 1555 1555 2.08 SSBOND 3 CYS A 215 CYS B 134 1555 1555 2.06 SSBOND 4 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 5 CYS B 147 CYS B 203 1555 1555 2.11 SSBOND 6 CYS C 23 CYS C 89 1555 1555 2.59 SSBOND 7 CYS C 135 CYS C 195 1555 1555 2.08 SSBOND 8 CYS C 215 CYS D 134 1555 1555 2.50 SSBOND 9 CYS D 22 CYS D 96 1555 1555 2.07 SSBOND 10 CYS D 147 CYS D 203 1555 1555 2.03 CISPEP 1 SER A 7 PRO A 8 0 -8.81 CISPEP 2 SER A 7 PRO A 8 0 -5.64 CISPEP 3 SER A 95 PRO A 96 0 4.27 CISPEP 4 TYR A 141 PRO A 142 0 2.38 CISPEP 5 PHE B 153 PRO B 154 0 -3.88 CISPEP 6 GLU B 155 PRO B 156 0 -3.33 CISPEP 7 SER C 7 PRO C 8 0 -5.57 CISPEP 8 SER C 7 PRO C 8 0 -8.51 CISPEP 9 SER C 95 PRO C 96 0 3.57 CISPEP 10 TYR C 141 PRO C 142 0 3.05 CISPEP 11 PHE D 153 PRO D 154 0 -3.91 CISPEP 12 GLU D 155 PRO D 156 0 -2.24 SITE 1 AC1 8 THR A 165 GLU A 166 GLN A 167 ASP A 168 SITE 2 AC1 8 HOH A 335 HOH A 336 HOH A 356 HIS B 171 SITE 1 AC2 10 SER A 163 SER A 177 SER A 178 THR A 179 SITE 2 AC2 10 PHE B 173 PRO B 174 SER B 184 LEU B 185 SITE 3 AC2 10 SER B 186 HOH B 347 SITE 1 AC3 3 VAL B 2 THR B 28 PHE B 29 SITE 1 AC4 7 GLU C 166 GLN C 167 ASP C 168 HOH C 235 SITE 2 AC4 7 HOH C 274 HOH C 317 HIS D 171 SITE 1 AC5 10 SER C 163 SER C 177 SER C 178 THR C 179 SITE 2 AC5 10 PHE D 173 PRO D 174 SER D 184 LEU D 185 SITE 3 AC5 10 SER D 186 HOH D 429 SITE 1 AC6 3 VAL D 2 THR D 28 PHE D 29 CRYST1 91.561 83.009 91.824 90.00 103.38 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010922 0.000000 0.002598 0.00000 SCALE2 0.000000 0.012047 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011194 0.00000