data_3EY0
# 
_entry.id   3EY0 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.389 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   3EY0         pdb_00003ey0 10.2210/pdb3ey0/pdb 
NDB   DD0102       ?            ?                   
RCSB  RCSB049908   ?            ?                   
WWPDB D_1000049908 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2009-10-27 
2 'Structure model' 1 1 2011-07-13 
3 'Structure model' 1 2 2023-12-27 
4 'Structure model' 1 3 2024-04-03 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' Advisory                    
2 2 'Structure model' 'Refinement description'    
3 2 'Structure model' 'Version format compliance' 
4 3 'Structure model' 'Data collection'           
5 3 'Structure model' 'Database references'       
6 3 'Structure model' 'Derived calculations'      
7 4 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 3 'Structure model' chem_comp_atom                
2 3 'Structure model' chem_comp_bond                
3 3 'Structure model' database_2                    
4 3 'Structure model' pdbx_struct_conn_angle        
5 3 'Structure model' struct_conn                   
6 3 'Structure model' struct_site                   
7 4 'Structure model' pdbx_initial_refinement_model 
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  3 'Structure model' '_database_2.pdbx_DOI'                        
2  3 'Structure model' '_database_2.pdbx_database_accession'         
3  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
4  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
5  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
6  3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
7  3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
8  3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
9  3 'Structure model' '_pdbx_struct_conn_angle.value'               
10 3 'Structure model' '_struct_conn.pdbx_dist_value'                
11 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
12 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
13 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
14 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
15 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
16 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
17 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
18 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
19 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
20 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
21 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
22 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
23 3 'Structure model' '_struct_site.pdbx_auth_asym_id'              
24 3 'Structure model' '_struct_site.pdbx_auth_comp_id'              
25 3 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        3EY0 
_pdbx_database_status.recvd_initial_deposition_date   2008-10-17 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Pous, J.'       1 
'Moreno, T.'     2 
'Subirana, J.A.' 3 
'Campos, J.L.'   4 
# 
_citation.id                        primary 
_citation.title                     'Coiled-coil conformation of a pentamidine-DNA complex' 
_citation.journal_abbrev            'Acta Crystallogr.,Sect.D' 
_citation.journal_volume            66 
_citation.page_first                251 
_citation.page_last                 257 
_citation.year                      2010 
_citation.journal_id_ASTM           ABCRE6 
_citation.country                   DK 
_citation.journal_id_ISSN           0907-4449 
_citation.journal_id_CSD            0766 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   20179336 
_citation.pdbx_database_id_DOI      10.1107/S0907444909055693 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Moreno, T.'     1 ? 
primary 'Pous, J.'       2 ? 
primary 'Subirana, J.A.' 3 ? 
primary 'Campos, J.L.'   4 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn "5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DAP*DTP*DAP*DT)-3'" 3042.041 2  ? ? ? ? 
2 non-polymer syn '1,5-BIS(4-AMIDINOPHENOXY)PENTANE'                 340.419  1  ? ? ? ? 
3 non-polymer syn 'MAGNESIUM ION'                                    24.305   1  ? ? ? ? 
4 water       nat water                                              18.015   51 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DT)(DA)(DT)' 
_entity_poly.pdbx_seq_one_letter_code_can   ATATATATAT 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 '1,5-BIS(4-AMIDINOPHENOXY)PENTANE' PNT 
3 'MAGNESIUM ION'                    MG  
4 water                              HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DA n 
1 2  DT n 
1 3  DA n 
1 4  DT n 
1 5  DA n 
1 6  DT n 
1 7  DA n 
1 8  DT n 
1 9  DA n 
1 10 DT n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'Synthesized by using phosphoramiditine method' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
MG  non-polymer   . 'MAGNESIUM ION'                      ? 'Mg 2'            24.305  
PNT non-polymer   . '1,5-BIS(4-AMIDINOPHENOXY)PENTANE'   ? 'C19 H24 N4 O2'   340.419 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DA 1  1  1  DA A A . n 
A 1 2  DT 2  2  2  DT T A . n 
A 1 3  DA 3  3  3  DA A A . n 
A 1 4  DT 4  4  4  DT T A . n 
A 1 5  DA 5  5  5  DA A A . n 
A 1 6  DT 6  6  6  DT T A . n 
A 1 7  DA 7  7  7  DA A A . n 
A 1 8  DT 8  8  8  DT T A . n 
A 1 9  DA 9  9  9  DA A A . n 
A 1 10 DT 10 10 10 DT T A . n 
B 1 1  DA 1  1  1  DA A B . n 
B 1 2  DT 2  2  2  DT T B . n 
B 1 3  DA 3  3  3  DA A B . n 
B 1 4  DT 4  4  4  DT T B . n 
B 1 5  DA 5  5  5  DA A B . n 
B 1 6  DT 6  6  6  DT T B . n 
B 1 7  DA 7  7  7  DA A B . n 
B 1 8  DT 8  8  8  DT T B . n 
B 1 9  DA 9  9  9  DA A B . n 
B 1 10 DT 10 10 10 DT T B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 PNT 1  11 1  PNT PNT A . 
D 3 MG  1  11 1  MG  MG  B . 
E 4 HOH 1  12 4  HOH HOH A . 
E 4 HOH 2  13 5  HOH HOH A . 
E 4 HOH 3  14 9  HOH HOH A . 
E 4 HOH 4  15 11 HOH HOH A . 
E 4 HOH 5  16 13 HOH HOH A . 
E 4 HOH 6  17 15 HOH HOH A . 
E 4 HOH 7  18 17 HOH HOH A . 
E 4 HOH 8  19 18 HOH HOH A . 
E 4 HOH 9  20 19 HOH HOH A . 
E 4 HOH 10 21 29 HOH HOH A . 
E 4 HOH 11 22 35 HOH HOH A . 
E 4 HOH 12 23 41 HOH HOH A . 
E 4 HOH 13 24 43 HOH HOH A . 
E 4 HOH 14 25 57 HOH HOH A . 
E 4 HOH 15 26 58 HOH HOH A . 
E 4 HOH 16 27 66 HOH HOH A . 
E 4 HOH 17 28 67 HOH HOH A . 
E 4 HOH 18 29 68 HOH HOH A . 
E 4 HOH 19 30 70 HOH HOH A . 
E 4 HOH 20 32 79 HOH HOH A . 
E 4 HOH 21 33 80 HOH HOH A . 
E 4 HOH 22 34 81 HOH HOH A . 
E 4 HOH 23 35 82 HOH HOH A . 
E 4 HOH 24 36 83 HOH HOH A . 
E 4 HOH 25 37 84 HOH HOH A . 
E 4 HOH 26 38 86 HOH HOH A . 
E 4 HOH 27 39 87 HOH HOH A . 
F 4 HOH 1  31 77 HOH HOH B . 
F 4 HOH 2  32 1  HOH HOH B . 
F 4 HOH 3  33 2  HOH HOH B . 
F 4 HOH 4  34 3  HOH HOH B . 
F 4 HOH 5  35 7  HOH HOH B . 
F 4 HOH 6  36 12 HOH HOH B . 
F 4 HOH 7  37 14 HOH HOH B . 
F 4 HOH 8  38 22 HOH HOH B . 
F 4 HOH 9  39 25 HOH HOH B . 
F 4 HOH 10 40 27 HOH HOH B . 
F 4 HOH 11 41 28 HOH HOH B . 
F 4 HOH 12 42 30 HOH HOH B . 
F 4 HOH 13 43 31 HOH HOH B . 
F 4 HOH 14 44 59 HOH HOH B . 
F 4 HOH 15 45 60 HOH HOH B . 
F 4 HOH 16 46 61 HOH HOH B . 
F 4 HOH 17 47 63 HOH HOH B . 
F 4 HOH 18 48 64 HOH HOH B . 
F 4 HOH 19 49 71 HOH HOH B . 
F 4 HOH 20 50 72 HOH HOH B . 
F 4 HOH 21 51 73 HOH HOH B . 
F 4 HOH 22 52 74 HOH HOH B . 
F 4 HOH 23 53 78 HOH HOH B . 
F 4 HOH 24 54 88 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
ADSC     'data collection' Quantum  ? 1 
AMoRE    phasing           .        ? 2 
REFMAC   refinement        5.4.0069 ? 3 
HKL-2000 'data reduction'  .        ? 4 
HKL-2000 'data scaling'    .        ? 5 
# 
_cell.entry_id           3EY0 
_cell.length_a           27.789 
_cell.length_b           27.789 
_cell.length_c           311.950 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        120.00 
_cell.Z_PDB              24 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         3EY0 
_symmetry.space_group_name_H-M             'P 65 2 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                179 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          3EY0 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.86 
_exptl_crystal.density_percent_sol   56.95 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            278.15 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.0 
_exptl_crystal_grow.pdbx_details    
'20 mM MgCl2, 50 mM MES, 15% Isopropanol, 3.62 mM ds-DNA, 16.86 mM PNT, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 278.15K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 MgCl2       ? ? ? 
1 2 1 MES         ? ? ? 
1 3 1 Isopropanol ? ? ? 
1 4 1 ds-DNA      ? ? ? 
1 5 1 PNT         ? ? ? 
1 6 2 MgCl2       ? ? ? 
1 7 2 MES         ? ? ? 
1 8 2 Isopropanol ? ? ? 
1 9 2 PNT         ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           104 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'ADSC QUANTUM 210' 
_diffrn_detector.pdbx_collection_date   2008-04-24 
_diffrn_detector.details                Mirrors 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    'Si(111)' 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.97950 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'ESRF BEAMLINE BM16' 
_diffrn_source.pdbx_synchrotron_site       ESRF 
_diffrn_source.pdbx_synchrotron_beamline   BM16 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        0.97950 
# 
_reflns.entry_id                     3EY0 
_reflns.observed_criterion_sigma_I   -3.0 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             50.0 
_reflns.d_resolution_high            2.52 
_reflns.number_obs                   2899 
_reflns.number_all                   2899 
_reflns.percent_possible_obs         94.7 
_reflns.pdbx_Rmerge_I_obs            0.098 
_reflns.pdbx_Rsym_value              0.098 
_reflns.pdbx_netI_over_sigmaI        37.625 
_reflns.B_iso_Wilson_estimate        56.01 
_reflns.pdbx_redundancy              15.8 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             2.52 
_reflns_shell.d_res_low              2.56 
_reflns_shell.percent_possible_all   100.0 
_reflns_shell.Rmerge_I_obs           0.212 
_reflns_shell.pdbx_Rsym_value        0.212 
_reflns_shell.meanI_over_sigI_obs    15.750 
_reflns_shell.pdbx_redundancy        18.4 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      128 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 3EY0 
_refine.ls_number_reflns_obs                     2511 
_refine.ls_number_reflns_all                     2782 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             50.0 
_refine.ls_d_res_high                            2.52 
_refine.ls_percent_reflns_obs                    93.62 
_refine.ls_R_factor_obs                          0.22193 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.21572 
_refine.ls_R_factor_R_free                       0.27715 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 9.4 
_refine.ls_number_reflns_R_free                  262 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               0.936 
_refine.correlation_coeff_Fo_to_Fc_free          0.885 
_refine.B_iso_mean                               43.499 
_refine.aniso_B[1][1]                            0.22 
_refine.aniso_B[2][2]                            0.22 
_refine.aniso_B[3][3]                            -0.34 
_refine.aniso_B[1][2]                            0.11 
_refine.aniso_B[1][3]                            0.00 
_refine.aniso_B[2][3]                            0.00 
_refine.solvent_model_details                    'BABINET MODEL WITH MASK' 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             1.20 
_refine.pdbx_solvent_ion_probe_radii             0.80 
_refine.pdbx_solvent_shrinkage_radii             0.80 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' 
_refine.pdbx_starting_model                      'standard watson-crick DNA' 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       0.520 
_refine.pdbx_overall_ESU_R_Free                  0.323 
_refine.overall_SU_ML                            0.238 
_refine.overall_SU_B                             25.145 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_TLS_residual_ADP_flag               'LIKELY RESIDUAL' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   404 
_refine_hist.pdbx_number_atoms_ligand         26 
_refine_hist.number_atoms_solvent             51 
_refine_hist.number_atoms_total               481 
_refine_hist.d_res_high                       2.52 
_refine_hist.d_res_low                        50.0 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
r_bond_refined_d     0.018 0.021 ? 480 'X-RAY DIFFRACTION' ? 
r_bond_other_d       0.003 0.020 ? 236 'X-RAY DIFFRACTION' ? 
r_angle_refined_deg  1.644 3.000 ? 727 'X-RAY DIFFRACTION' ? 
r_angle_other_deg    1.224 3.000 ? 571 'X-RAY DIFFRACTION' ? 
r_chiral_restr       0.052 0.200 ? 78  'X-RAY DIFFRACTION' ? 
r_gen_planes_refined 0.006 0.020 ? 238 'X-RAY DIFFRACTION' ? 
r_gen_planes_other   0.002 0.020 ? 58  'X-RAY DIFFRACTION' ? 
r_scbond_it          1.028 3.000 ? 200 'X-RAY DIFFRACTION' ? 
r_scangle_it         1.577 4.500 ? 311 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.d_res_high                       2.52 
_refine_ls_shell.d_res_low                        2.59 
_refine_ls_shell.number_reflns_R_work             162 
_refine_ls_shell.R_factor_R_work                  0.248 
_refine_ls_shell.percent_reflns_obs               95.19 
_refine_ls_shell.R_factor_R_free                  0.411 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             16 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
# 
_database_PDB_matrix.entry_id          3EY0 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  3EY0 
_struct.title                     'A new form of DNA-drug interaction in the minor groove of a coiled coil' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            N 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        3EY0 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'DNA drug pentamidine coiled-coil all-AT, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 3 ? 
E N N 4 ? 
F N N 4 ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    3EY0 
_struct_ref.pdbx_db_accession          3EY0 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_align_begin           1 
_struct_ref.pdbx_seq_one_letter_code   ATATATATAT 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 3EY0 A 1 ? 10 ? 3EY0 1 ? 10 ? 1 10 
2 1 3EY0 B 1 ? 10 ? 3EY0 1 ? 10 ? 1 10 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 1070 ? 
1 MORE         -8.5 ? 
1 'SSA (A^2)'  4410 ? 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   'Double stranded ATATATATAT' 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? E HOH .  O  ? ? ? 1_555 D MG  .  MG ? ? A HOH 27 B MG  11 1_555 ? ? ? ? ? ? ?            2.188 ? ? 
metalc2  metalc ? ? E HOH .  O  ? ? ? 1_555 D MG  .  MG ? ? A HOH 28 B MG  11 1_555 ? ? ? ? ? ? ?            2.712 ? ? 
metalc3  metalc ? ? E HOH .  O  ? ? ? 1_555 D MG  .  MG ? ? A HOH 29 B MG  11 1_555 ? ? ? ? ? ? ?            2.264 ? ? 
metalc4  metalc ? ? D MG  .  MG ? ? ? 1_555 F HOH .  O  ? ? B MG  11 B HOH 33 1_555 ? ? ? ? ? ? ?            1.910 ? ? 
metalc5  metalc ? ? D MG  .  MG ? ? ? 1_555 F HOH .  O  ? ? B MG  11 B HOH 53 1_555 ? ? ? ? ? ? ?            2.050 ? ? 
metalc6  metalc ? ? D MG  .  MG ? ? ? 1_555 F HOH .  O  ? ? B MG  11 B HOH 54 1_555 ? ? ? ? ? ? ?            2.472 ? ? 
hydrog1  hydrog ? ? A DA  1  N1 ? ? ? 1_555 B DT  10 N3 ? ? A DA  1  B DT  10 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ? ? A DA  1  N6 ? ? ? 1_555 B DT  10 O4 ? ? A DA  1  B DT  10 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ? ? A DT  2  N3 ? ? ? 1_555 B DA  9  N1 ? ? A DT  2  B DA  9  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ? ? A DT  2  O4 ? ? ? 1_555 B DA  9  N6 ? ? A DT  2  B DA  9  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ? ? A DA  3  N1 ? ? ? 1_555 B DT  8  N3 ? ? A DA  3  B DT  8  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ? ? A DA  3  N6 ? ? ? 1_555 B DT  8  O4 ? ? A DA  3  B DT  8  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ? ? A DT  4  N3 ? ? ? 1_555 B DA  7  N1 ? ? A DT  4  B DA  7  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ? ? A DT  4  O4 ? ? ? 1_555 B DA  7  N6 ? ? A DT  4  B DA  7  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ? ? A DA  5  N1 ? ? ? 1_555 B DT  6  N3 ? ? A DA  5  B DT  6  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ? ? A DA  5  N6 ? ? ? 1_555 B DT  6  O4 ? ? A DA  5  B DT  6  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ? ? A DT  6  N3 ? ? ? 1_555 B DA  5  N1 ? ? A DT  6  B DA  5  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ? ? A DT  6  O4 ? ? ? 1_555 B DA  5  N6 ? ? A DT  6  B DA  5  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ? ? A DA  7  N1 ? ? ? 1_555 B DT  4  N3 ? ? A DA  7  B DT  4  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ? ? A DA  7  N6 ? ? ? 1_555 B DT  4  O4 ? ? A DA  7  B DT  4  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ? ? A DT  8  N3 ? ? ? 1_555 B DA  3  N1 ? ? A DT  8  B DA  3  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ? ? A DT  8  O4 ? ? ? 1_555 B DA  3  N6 ? ? A DT  8  B DA  3  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ? ? A DA  9  N1 ? ? ? 1_555 B DT  2  N3 ? ? A DA  9  B DT  2  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ? ? A DA  9  N6 ? ? ? 1_555 B DT  2  O4 ? ? A DA  9  B DT  2  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ? ? A DT  10 N3 ? ? ? 1_555 B DA  1  N7 ? ? A DT  10 B DA  1  1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? ? 
hydrog20 hydrog ? ? A DT  10 O4 ? ? ? 1_555 B DA  1  N6 ? ? A DT  10 B DA  1  1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O ? E HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? E HOH . ? A HOH 28 ? 1_555 99.7  ? 
2  O ? E HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? E HOH . ? A HOH 29 ? 1_555 75.0  ? 
3  O ? E HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? E HOH . ? A HOH 29 ? 1_555 74.3  ? 
4  O ? E HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 33 ? 1_555 95.0  ? 
5  O ? E HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 33 ? 1_555 113.2 ? 
6  O ? E HOH . ? A HOH 29 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 33 ? 1_555 168.7 ? 
7  O ? E HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 53 ? 1_555 85.1  ? 
8  O ? E HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 53 ? 1_555 159.9 ? 
9  O ? E HOH . ? A HOH 29 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 53 ? 1_555 88.3  ? 
10 O ? F HOH . ? B HOH 33 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 53 ? 1_555 85.6  ? 
11 O ? E HOH . ? A HOH 27 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 54 ? 1_555 165.2 ? 
12 O ? E HOH . ? A HOH 28 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 54 ? 1_555 95.0  ? 
13 O ? E HOH . ? A HOH 29 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 54 ? 1_555 107.2 ? 
14 O ? F HOH . ? B HOH 33 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 54 ? 1_555 81.1  ? 
15 O ? F HOH . ? B HOH 53 ? 1_555 MG ? D MG . ? B MG 11 ? 1_555 O ? F HOH . ? B HOH 54 ? 1_555 80.4  ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A PNT 11 ? 14 'BINDING SITE FOR RESIDUE PNT A 11' 
AC2 Software B MG  11 ? 6  'BINDING SITE FOR RESIDUE MG B 11'  
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 14 DA  A 5  ? DA  A 5  . ? 1_555 ? 
2  AC1 14 DT  A 6  ? DT  A 6  . ? 1_555 ? 
3  AC1 14 DA  A 7  ? DA  A 7  . ? 1_555 ? 
4  AC1 14 DT  A 8  ? DT  A 8  . ? 1_555 ? 
5  AC1 14 DA  A 9  ? DA  A 9  . ? 1_555 ? 
6  AC1 14 DT  A 10 ? DT  A 10 . ? 1_555 ? 
7  AC1 14 HOH E .  ? HOH A 32 . ? 1_555 ? 
8  AC1 14 DA  B 5  ? DA  B 5  . ? 1_555 ? 
9  AC1 14 DT  B 6  ? DT  B 6  . ? 1_555 ? 
10 AC1 14 DA  B 7  ? DA  B 7  . ? 1_555 ? 
11 AC1 14 DT  B 8  ? DT  B 8  . ? 1_555 ? 
12 AC1 14 DT  B 10 ? DT  B 10 . ? 1_555 ? 
13 AC1 14 HOH F .  ? HOH B 32 . ? 1_555 ? 
14 AC1 14 HOH F .  ? HOH B 35 . ? 1_555 ? 
15 AC2 6  HOH E .  ? HOH A 27 . ? 1_555 ? 
16 AC2 6  HOH E .  ? HOH A 28 . ? 1_555 ? 
17 AC2 6  HOH E .  ? HOH A 29 . ? 1_555 ? 
18 AC2 6  HOH F .  ? HOH B 33 . ? 1_555 ? 
19 AC2 6  HOH F .  ? HOH B 53 . ? 1_555 ? 
20 AC2 6  HOH F .  ? HOH B 54 . ? 1_555 ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "C3'" A DT 4  ? ? "C2'" A DT 4  ? ? "C1'" A DT 4  ? ? 96.89  102.40 -5.51 0.80 N 
2 1 "O4'" B DA 1  ? ? "C1'" B DA 1  ? ? N9    B DA 1  ? ? 110.80 108.30 2.50  0.30 N 
3 1 "O4'" B DT 6  ? ? "C1'" B DT 6  ? ? N1    B DT 6  ? ? 111.25 108.30 2.95  0.30 N 
4 1 "O4'" B DT 10 ? ? "C1'" B DT 10 ? ? N1    B DT 10 ? ? 111.47 108.30 3.17  0.30 N 
# 
_pdbx_refine_tls.pdbx_refine_id   'X-RAY DIFFRACTION' 
_pdbx_refine_tls.id               1 
_pdbx_refine_tls.details          ? 
_pdbx_refine_tls.method           refined 
_pdbx_refine_tls.origin_x         16.2235 
_pdbx_refine_tls.origin_y         10.8519 
_pdbx_refine_tls.origin_z         90.3531 
_pdbx_refine_tls.T[1][1]          -0.0827 
_pdbx_refine_tls.T[2][2]          0.1452 
_pdbx_refine_tls.T[3][3]          -0.0839 
_pdbx_refine_tls.T[1][2]          0.0185 
_pdbx_refine_tls.T[1][3]          0.0070 
_pdbx_refine_tls.T[2][3]          0.0225 
_pdbx_refine_tls.L[1][1]          5.9764 
_pdbx_refine_tls.L[2][2]          1.5319 
_pdbx_refine_tls.L[3][3]          3.9536 
_pdbx_refine_tls.L[1][2]          0.6693 
_pdbx_refine_tls.L[1][3]          -3.1111 
_pdbx_refine_tls.L[2][3]          -0.8875 
_pdbx_refine_tls.S[1][1]          -0.3623 
_pdbx_refine_tls.S[2][2]          0.1994 
_pdbx_refine_tls.S[3][3]          0.1629 
_pdbx_refine_tls.S[1][2]          0.3347 
_pdbx_refine_tls.S[1][3]          0.0450 
_pdbx_refine_tls.S[2][3]          -0.1417 
_pdbx_refine_tls.S[2][1]          -0.0277 
_pdbx_refine_tls.S[3][1]          0.2706 
_pdbx_refine_tls.S[3][2]          0.0280 
# 
_pdbx_refine_tls_group.pdbx_refine_id      'X-RAY DIFFRACTION' 
_pdbx_refine_tls_group.id                  1 
_pdbx_refine_tls_group.refine_tls_id       1 
_pdbx_refine_tls_group.beg_auth_asym_id    A 
_pdbx_refine_tls_group.beg_auth_seq_id     1 
_pdbx_refine_tls_group.end_auth_asym_id    A 
_pdbx_refine_tls_group.end_auth_seq_id     10 
_pdbx_refine_tls_group.selection_details   ? 
_pdbx_refine_tls_group.beg_label_asym_id   . 
_pdbx_refine_tls_group.beg_label_seq_id    . 
_pdbx_refine_tls_group.end_label_asym_id   . 
_pdbx_refine_tls_group.end_label_seq_id    . 
_pdbx_refine_tls_group.selection           ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O  N N 1   
DA  P      P  N N 2   
DA  OP1    O  N N 3   
DA  OP2    O  N N 4   
DA  "O5'"  O  N N 5   
DA  "C5'"  C  N N 6   
DA  "C4'"  C  N R 7   
DA  "O4'"  O  N N 8   
DA  "C3'"  C  N S 9   
DA  "O3'"  O  N N 10  
DA  "C2'"  C  N N 11  
DA  "C1'"  C  N R 12  
DA  N9     N  Y N 13  
DA  C8     C  Y N 14  
DA  N7     N  Y N 15  
DA  C5     C  Y N 16  
DA  C6     C  Y N 17  
DA  N6     N  N N 18  
DA  N1     N  Y N 19  
DA  C2     C  Y N 20  
DA  N3     N  Y N 21  
DA  C4     C  Y N 22  
DA  HOP3   H  N N 23  
DA  HOP2   H  N N 24  
DA  "H5'"  H  N N 25  
DA  "H5''" H  N N 26  
DA  "H4'"  H  N N 27  
DA  "H3'"  H  N N 28  
DA  "HO3'" H  N N 29  
DA  "H2'"  H  N N 30  
DA  "H2''" H  N N 31  
DA  "H1'"  H  N N 32  
DA  H8     H  N N 33  
DA  H61    H  N N 34  
DA  H62    H  N N 35  
DA  H2     H  N N 36  
DT  OP3    O  N N 37  
DT  P      P  N N 38  
DT  OP1    O  N N 39  
DT  OP2    O  N N 40  
DT  "O5'"  O  N N 41  
DT  "C5'"  C  N N 42  
DT  "C4'"  C  N R 43  
DT  "O4'"  O  N N 44  
DT  "C3'"  C  N S 45  
DT  "O3'"  O  N N 46  
DT  "C2'"  C  N N 47  
DT  "C1'"  C  N R 48  
DT  N1     N  N N 49  
DT  C2     C  N N 50  
DT  O2     O  N N 51  
DT  N3     N  N N 52  
DT  C4     C  N N 53  
DT  O4     O  N N 54  
DT  C5     C  N N 55  
DT  C7     C  N N 56  
DT  C6     C  N N 57  
DT  HOP3   H  N N 58  
DT  HOP2   H  N N 59  
DT  "H5'"  H  N N 60  
DT  "H5''" H  N N 61  
DT  "H4'"  H  N N 62  
DT  "H3'"  H  N N 63  
DT  "HO3'" H  N N 64  
DT  "H2'"  H  N N 65  
DT  "H2''" H  N N 66  
DT  "H1'"  H  N N 67  
DT  H3     H  N N 68  
DT  H71    H  N N 69  
DT  H72    H  N N 70  
DT  H73    H  N N 71  
DT  H6     H  N N 72  
HOH O      O  N N 73  
HOH H1     H  N N 74  
HOH H2     H  N N 75  
MG  MG     MG N N 76  
PNT C1     C  Y N 77  
PNT C2     C  Y N 78  
PNT C3     C  Y N 79  
PNT C4     C  Y N 80  
PNT C5     C  Y N 81  
PNT C6     C  Y N 82  
PNT C7     C  N N 83  
PNT C8     C  N N 84  
PNT C9     C  N N 85  
PNT C10    C  N N 86  
PNT "C1'"  C  Y N 87  
PNT "C2'"  C  Y N 88  
PNT "C3'"  C  Y N 89  
PNT "C4'"  C  Y N 90  
PNT "C5'"  C  Y N 91  
PNT "C6'"  C  Y N 92  
PNT "C7'"  C  N N 93  
PNT "C8'"  C  N N 94  
PNT "C9'"  C  N N 95  
PNT O1     O  N N 96  
PNT "O1'"  O  N N 97  
PNT N1     N  N N 98  
PNT N2     N  N N 99  
PNT "N1'"  N  N N 100 
PNT "N2'"  N  N N 101 
PNT H2     H  N N 102 
PNT H3     H  N N 103 
PNT H5     H  N N 104 
PNT H6     H  N N 105 
PNT H71    H  N N 106 
PNT H72    H  N N 107 
PNT H81    H  N N 108 
PNT H82    H  N N 109 
PNT H101   H  N N 110 
PNT H102   H  N N 111 
PNT "H2'"  H  N N 112 
PNT "H3'"  H  N N 113 
PNT "H5'"  H  N N 114 
PNT "H6'"  H  N N 115 
PNT "H7'1" H  N N 116 
PNT "H7'2" H  N N 117 
PNT "H8'1" H  N N 118 
PNT "H8'2" H  N N 119 
PNT HN1    H  N N 120 
PNT HN2    H  N N 121 
PNT HN3    H  N N 122 
PNT "HN'1" H  N N 123 
PNT "HN'2" H  N N 124 
PNT "HN'3" H  N N 125 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DT  OP3   P      sing N N 39  
DT  OP3   HOP3   sing N N 40  
DT  P     OP1    doub N N 41  
DT  P     OP2    sing N N 42  
DT  P     "O5'"  sing N N 43  
DT  OP2   HOP2   sing N N 44  
DT  "O5'" "C5'"  sing N N 45  
DT  "C5'" "C4'"  sing N N 46  
DT  "C5'" "H5'"  sing N N 47  
DT  "C5'" "H5''" sing N N 48  
DT  "C4'" "O4'"  sing N N 49  
DT  "C4'" "C3'"  sing N N 50  
DT  "C4'" "H4'"  sing N N 51  
DT  "O4'" "C1'"  sing N N 52  
DT  "C3'" "O3'"  sing N N 53  
DT  "C3'" "C2'"  sing N N 54  
DT  "C3'" "H3'"  sing N N 55  
DT  "O3'" "HO3'" sing N N 56  
DT  "C2'" "C1'"  sing N N 57  
DT  "C2'" "H2'"  sing N N 58  
DT  "C2'" "H2''" sing N N 59  
DT  "C1'" N1     sing N N 60  
DT  "C1'" "H1'"  sing N N 61  
DT  N1    C2     sing N N 62  
DT  N1    C6     sing N N 63  
DT  C2    O2     doub N N 64  
DT  C2    N3     sing N N 65  
DT  N3    C4     sing N N 66  
DT  N3    H3     sing N N 67  
DT  C4    O4     doub N N 68  
DT  C4    C5     sing N N 69  
DT  C5    C7     sing N N 70  
DT  C5    C6     doub N N 71  
DT  C7    H71    sing N N 72  
DT  C7    H72    sing N N 73  
DT  C7    H73    sing N N 74  
DT  C6    H6     sing N N 75  
HOH O     H1     sing N N 76  
HOH O     H2     sing N N 77  
PNT C1    C2     doub Y N 78  
PNT C1    C6     sing Y N 79  
PNT C1    O1     sing N N 80  
PNT C2    C3     sing Y N 81  
PNT C2    H2     sing N N 82  
PNT C3    C4     doub Y N 83  
PNT C3    H3     sing N N 84  
PNT C4    C5     sing Y N 85  
PNT C4    C9     sing N N 86  
PNT C5    C6     doub Y N 87  
PNT C5    H5     sing N N 88  
PNT C6    H6     sing N N 89  
PNT C7    C8     sing N N 90  
PNT C7    O1     sing N N 91  
PNT C7    H71    sing N N 92  
PNT C7    H72    sing N N 93  
PNT C8    C10    sing N N 94  
PNT C8    H81    sing N N 95  
PNT C8    H82    sing N N 96  
PNT C9    N1     doub N N 97  
PNT C9    N2     sing N N 98  
PNT C10   "C8'"  sing N N 99  
PNT C10   H101   sing N N 100 
PNT C10   H102   sing N N 101 
PNT "C1'" "C2'"  doub Y N 102 
PNT "C1'" "C6'"  sing Y N 103 
PNT "C1'" "O1'"  sing N N 104 
PNT "C2'" "C3'"  sing Y N 105 
PNT "C2'" "H2'"  sing N N 106 
PNT "C3'" "C4'"  doub Y N 107 
PNT "C3'" "H3'"  sing N N 108 
PNT "C4'" "C5'"  sing Y N 109 
PNT "C4'" "C9'"  sing N N 110 
PNT "C5'" "C6'"  doub Y N 111 
PNT "C5'" "H5'"  sing N N 112 
PNT "C6'" "H6'"  sing N N 113 
PNT "C7'" "C8'"  sing N N 114 
PNT "C7'" "O1'"  sing N N 115 
PNT "C7'" "H7'1" sing N N 116 
PNT "C7'" "H7'2" sing N N 117 
PNT "C8'" "H8'1" sing N N 118 
PNT "C8'" "H8'2" sing N N 119 
PNT "C9'" "N1'"  doub N N 120 
PNT "C9'" "N2'"  sing N N 121 
PNT N1    HN1    sing N N 122 
PNT N2    HN2    sing N N 123 
PNT N2    HN3    sing N N 124 
PNT "N1'" "HN'1" sing N N 125 
PNT "N2'" "HN'2" sing N N 126 
PNT "N2'" "HN'3" sing N N 127 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
3EY0 'double helix'        
3EY0 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DA 1  1_555 B DT 10 1_555 -0.377 -0.038 0.063  -10.466 -15.217 3.292   1  A_DA1:DT10_B A 1  ? B 10 ? 20 1 
1 A DT 2  1_555 B DA 9  1_555 -0.016 -0.217 -0.189 3.364   -6.020  -0.908  2  A_DT2:DA9_B  A 2  ? B 9  ? 20 1 
1 A DA 3  1_555 B DT 8  1_555 -0.092 -0.148 -0.142 -3.973  -11.059 4.672   3  A_DA3:DT8_B  A 3  ? B 8  ? 20 1 
1 A DT 4  1_555 B DA 7  1_555 -0.066 -0.126 0.035  3.771   -9.902  -5.234  4  A_DT4:DA7_B  A 4  ? B 7  ? 20 1 
1 A DA 5  1_555 B DT 6  1_555 -0.130 -0.044 0.152  -2.000  -5.414  3.488   5  A_DA5:DT6_B  A 5  ? B 6  ? 20 1 
1 A DT 6  1_555 B DA 5  1_555 0.345  -0.095 -0.230 9.106   -7.511  5.843   6  A_DT6:DA5_B  A 6  ? B 5  ? 20 1 
1 A DA 7  1_555 B DT 4  1_555 0.036  0.014  0.069  -1.216  -15.791 4.267   7  A_DA7:DT4_B  A 7  ? B 4  ? 20 1 
1 A DT 8  1_555 B DA 3  1_555 -0.206 0.021  -0.063 6.140   -13.421 3.781   8  A_DT8:DA3_B  A 8  ? B 3  ? 20 1 
1 A DA 9  1_555 B DT 2  1_555 -0.150 -0.167 -0.043 0.764   -8.394  13.135  9  A_DA9:DT2_B  A 9  ? B 2  ? 20 1 
1 A DT 10 1_555 B DA 1  1_555 -0.090 3.254  0.258  -2.629  -18.658 -69.635 10 A_DT10:DA1_B A 10 ? B 1  ? 23 3 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DA 1 1_555 B DT 10 1_555 A DT 2  1_555 B DA 9 1_555 -0.706 -1.016 3.031 3.720  5.504  32.743 -2.581 1.778  2.734 9.639  -6.515 
33.392 1 AA_DA1DT2:DA9DT10_BB A 1 ? B 10 ? A 2  ? B 9 ? 
1 A DT 2 1_555 B DA 9  1_555 A DA 3  1_555 B DT 8 1_555 0.115  -0.403 3.452 0.035  7.660  35.115 -1.796 -0.181 3.295 12.512 -0.057 
35.915 2 AA_DT2DA3:DT8DA9_BB  A 2 ? B 9  ? A 3  ? B 8 ? 
1 A DA 3 1_555 B DT 8  1_555 A DT 4  1_555 B DA 7 1_555 -0.693 -0.456 3.086 -0.823 2.346  31.499 -1.248 1.130  3.061 4.313  1.513  
31.595 3 AA_DA3DT4:DA7DT8_BB  A 3 ? B 8  ? A 4  ? B 7 ? 
1 A DT 4 1_555 B DA 7  1_555 A DA 5  1_555 B DT 6 1_555 0.462  0.675  3.477 -1.219 -6.351 45.399 1.444  -0.704 3.345 -8.179 1.571  
45.833 4 AA_DT4DA5:DT6DA7_BB  A 4 ? B 7  ? A 5  ? B 6 ? 
1 A DA 5 1_555 B DT 6  1_555 A DT 6  1_555 B DA 5 1_555 0.139  -0.158 3.072 3.221  -2.033 30.419 0.079  0.335  3.074 -3.856 -6.108 
30.651 5 AA_DA5DT6:DA5DT6_BB  A 5 ? B 6  ? A 6  ? B 5 ? 
1 A DT 6 1_555 B DA 5  1_555 A DA 7  1_555 B DT 4 1_555 -0.423 0.942  3.487 -2.812 0.482  43.671 1.215  0.280  3.516 0.648  3.775  
43.760 6 AA_DT6DA7:DT4DA5_BB  A 6 ? B 5  ? A 7  ? B 4 ? 
1 A DA 7 1_555 B DT 4  1_555 A DT 8  1_555 B DA 3 1_555 0.318  -0.444 3.148 0.955  -5.303 33.496 0.068  -0.395 3.187 -9.128 -1.643 
33.915 7 AA_DA7DT8:DA3DT4_BB  A 7 ? B 4  ? A 8  ? B 3 ? 
1 A DT 8 1_555 B DA 3  1_555 A DA 9  1_555 B DT 2 1_555 0.935  0.461  3.432 2.576  1.882  39.800 0.446  -1.055 3.501 2.759  -3.777 
39.923 8 AA_DT8DA9:DT2DA3_BB  A 8 ? B 3  ? A 9  ? B 2 ? 
1 A DA 9 1_555 B DT 2  1_555 A DT 10 1_555 B DA 1 1_555 0.776  -2.110 3.165 -4.020 -1.268 73.501 -1.722 -0.772 3.156 -1.059 3.356  
73.605 9 AA_DA9DT10:DA1DT2_BB A 9 ? B 2  ? A 10 ? B 1 ? 
# 
_pdbx_initial_refinement_model.accession_code   ? 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'in silico model' 
_pdbx_initial_refinement_model.source_name      Other 
_pdbx_initial_refinement_model.details          'standard watson-crick DNA' 
# 
_atom_sites.entry_id                    3EY0 
_atom_sites.fract_transf_matrix[1][1]   0.035985 
_atom_sites.fract_transf_matrix[1][2]   0.020776 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.041552 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.003206 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
O  
P  
# 
loop_