data_3EYD # _entry.id 3EYD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3EYD pdb_00003eyd 10.2210/pdb3eyd/pdb RCSB RCSB049921 ? ? WWPDB D_1000049921 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-12-27 5 'Structure model' 1 4 2024-04-03 6 'Structure model' 1 5 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_conn_type 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.conn_type_id' 4 3 'Structure model' '_struct_conn.id' 5 3 'Structure model' '_struct_conn.pdbx_dist_value' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 3 'Structure model' '_struct_conn_type.id' 21 3 'Structure model' '_struct_ref_seq_dif.details' 22 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3EYD _pdbx_database_status.recvd_initial_deposition_date 2008-10-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Venkatraman, S.' 1 'Wu, W.' 2 'Prongay, A.J.' 3 'Girijavallabhan, V.' 4 'Njoroge, F.G.' 5 # _citation.id primary _citation.title 'Potent inhibitors of HCV-NS3 protease derived from boronic acids.' _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 19 _citation.page_first 180 _citation.page_last 183 _citation.year 2009 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19022670 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2008.10.124 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Venkatraman, S.' 1 ? primary 'Wu, W.' 2 ? primary 'Prongay, A.' 3 ? primary 'Girijavallabhan, V.' 4 ? primary 'George Njoroge, F.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HCV NS3' 21233.225 2 ? ? 'Protease domain, UNP residues 1027-1207' ? 2 polymer syn 'HCV NS4a peptide' 2394.039 2 ? C22S 'UNP residues 1678-1696' ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 non-polymer syn ;[(1R)-2-cyclobutyl-1-({[(1R,2S,5S)-3-(N-{[(1S)-2,2-dimethyl-1-{[methyl(methylsulfonyl)amino]methyl}propyl]carbamoyl}-3-methyl-L-valyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hex-2-yl]carbonyl}amino)ethyl]boronic acid ; 627.644 1 ? ? ? ? 5 water nat water 18.015 257 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKG PVIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGH AVGLFRAAVCTRGVAKAVDFIPVENLETTMRSGSHHHHHH ; ;MASMTGGQQMGAPITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKG PVIQMYTNVDQDLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGH AVGLFRAAVCTRGVAKAVDFIPVENLETTMRSGSHHHHHH ; A,C ? 2 'polypeptide(L)' no no KKGSVVIVGRIVLSGKPAIIPKK KKGSVVIVGRIVLSGKPAIIPKK B,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 ;[(1R)-2-cyclobutyl-1-({[(1R,2S,5S)-3-(N-{[(1S)-2,2-dimethyl-1-{[methyl(methylsulfonyl)amino]methyl}propyl]carbamoyl}-3-methyl-L-valyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hex-2-yl]carbonyl}amino)ethyl]boronic acid ; BE8 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 MET n 1 5 THR n 1 6 GLY n 1 7 GLY n 1 8 GLN n 1 9 GLN n 1 10 MET n 1 11 GLY n 1 12 ALA n 1 13 PRO n 1 14 ILE n 1 15 THR n 1 16 ALA n 1 17 TYR n 1 18 ALA n 1 19 GLN n 1 20 GLN n 1 21 THR n 1 22 ARG n 1 23 GLY n 1 24 LEU n 1 25 LEU n 1 26 GLY n 1 27 CYS n 1 28 ILE n 1 29 ILE n 1 30 THR n 1 31 SER n 1 32 LEU n 1 33 THR n 1 34 GLY n 1 35 ARG n 1 36 ASP n 1 37 LYS n 1 38 ASN n 1 39 GLN n 1 40 VAL n 1 41 GLU n 1 42 GLY n 1 43 GLU n 1 44 VAL n 1 45 GLN n 1 46 ILE n 1 47 VAL n 1 48 SER n 1 49 THR n 1 50 ALA n 1 51 THR n 1 52 GLN n 1 53 THR n 1 54 PHE n 1 55 LEU n 1 56 ALA n 1 57 THR n 1 58 CYS n 1 59 ILE n 1 60 ASN n 1 61 GLY n 1 62 VAL n 1 63 CYS n 1 64 TRP n 1 65 THR n 1 66 VAL n 1 67 TYR n 1 68 HIS n 1 69 GLY n 1 70 ALA n 1 71 GLY n 1 72 THR n 1 73 ARG n 1 74 THR n 1 75 ILE n 1 76 ALA n 1 77 SER n 1 78 PRO n 1 79 LYS n 1 80 GLY n 1 81 PRO n 1 82 VAL n 1 83 ILE n 1 84 GLN n 1 85 MET n 1 86 TYR n 1 87 THR n 1 88 ASN n 1 89 VAL n 1 90 ASP n 1 91 GLN n 1 92 ASP n 1 93 LEU n 1 94 VAL n 1 95 GLY n 1 96 TRP n 1 97 PRO n 1 98 ALA n 1 99 PRO n 1 100 GLN n 1 101 GLY n 1 102 SER n 1 103 ARG n 1 104 SER n 1 105 LEU n 1 106 THR n 1 107 PRO n 1 108 CYS n 1 109 THR n 1 110 CYS n 1 111 GLY n 1 112 SER n 1 113 SER n 1 114 ASP n 1 115 LEU n 1 116 TYR n 1 117 LEU n 1 118 VAL n 1 119 THR n 1 120 ARG n 1 121 HIS n 1 122 ALA n 1 123 ASP n 1 124 VAL n 1 125 ILE n 1 126 PRO n 1 127 VAL n 1 128 ARG n 1 129 ARG n 1 130 ARG n 1 131 GLY n 1 132 ASP n 1 133 SER n 1 134 ARG n 1 135 GLY n 1 136 SER n 1 137 LEU n 1 138 LEU n 1 139 SER n 1 140 PRO n 1 141 ARG n 1 142 PRO n 1 143 ILE n 1 144 SER n 1 145 TYR n 1 146 LEU n 1 147 LYS n 1 148 GLY n 1 149 SER n 1 150 SER n 1 151 GLY n 1 152 GLY n 1 153 PRO n 1 154 LEU n 1 155 LEU n 1 156 CYS n 1 157 PRO n 1 158 ALA n 1 159 GLY n 1 160 HIS n 1 161 ALA n 1 162 VAL n 1 163 GLY n 1 164 LEU n 1 165 PHE n 1 166 ARG n 1 167 ALA n 1 168 ALA n 1 169 VAL n 1 170 CYS n 1 171 THR n 1 172 ARG n 1 173 GLY n 1 174 VAL n 1 175 ALA n 1 176 LYS n 1 177 ALA n 1 178 VAL n 1 179 ASP n 1 180 PHE n 1 181 ILE n 1 182 PRO n 1 183 VAL n 1 184 GLU n 1 185 ASN n 1 186 LEU n 1 187 GLU n 1 188 THR n 1 189 THR n 1 190 MET n 1 191 ARG n 1 192 SER n 1 193 GLY n 1 194 SER n 1 195 HIS n 1 196 HIS n 1 197 HIS n 1 198 HIS n 1 199 HIS n 1 200 HIS n 2 1 LYS n 2 2 LYS n 2 3 GLY n 2 4 SER n 2 5 VAL n 2 6 VAL n 2 7 ILE n 2 8 VAL n 2 9 GLY n 2 10 ARG n 2 11 ILE n 2 12 VAL n 2 13 LEU n 2 14 SER n 2 15 GLY n 2 16 LYS n 2 17 PRO n 2 18 ALA n 2 19 ILE n 2 20 ILE n 2 21 PRO n 2 22 LYS n 2 23 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ns3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'H77 Strain of genotype 1a' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'T7 epitope (MASMTGGQQMG) followed by HCV NS3 residues 1-181 the SGHHHHHH' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Hepatitis C virus subtype 1a' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 31646 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'bl21(de3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET-3a (Novagen)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;Peptides were synthesized using Fmoc solid-phase chemistry on an ABI 431 synthesizer (Foster City, CA). Preloaded 2-chlorotrityl chloride resin or Wang resin was used for the solid phase assembly of NS4A activator peptide. The sequence of the peptide was Lys-Lys-Gly-Ser-Val-Val-Ile-Val-Gly-Arg-Ile-Ile-Leu-Ser-Gly-Arg-Pro-Ala-Ile-Val-Pro-Lys-Lys-OH. Trifunctional residue sidechain protecting groups included tert-butyl for Ser, tert-butoxycarbonyl for Lys, and 2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl for Arg. Cleavage and sidechain deprotection was accomplished using 92.5% trifluoroacetic acid, with 2.5% each of water, ethanedithiol and triisopropylsilane for 2 hours. The peptide was purified by reversed phase HPLC. The peptide molecular weight was confirmed by electrospray ionization mass spectrometry. ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BE8 non-polymer . ;[(1R)-2-cyclobutyl-1-({[(1R,2S,5S)-3-(N-{[(1S)-2,2-dimethyl-1-{[methyl(methylsulfonyl)amino]methyl}propyl]carbamoyl}-3-methyl-L-valyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hex-2-yl]carbonyl}amino)ethyl]boronic acid ; ? 'C29 H54 B N5 O7 S' 627.644 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -10 ? ? ? A . n A 1 2 ALA 2 -9 ? ? ? A . n A 1 3 SER 3 -8 ? ? ? A . n A 1 4 MET 4 -7 ? ? ? A . n A 1 5 THR 5 -6 ? ? ? A . n A 1 6 GLY 6 -5 ? ? ? A . n A 1 7 GLY 7 -4 ? ? ? A . n A 1 8 GLN 8 -3 ? ? ? A . n A 1 9 GLN 9 -2 ? ? ? A . n A 1 10 MET 10 -1 ? ? ? A . n A 1 11 GLY 11 0 ? ? ? A . n A 1 12 ALA 12 1 1 ALA ALA A . n A 1 13 PRO 13 2 2 PRO PRO A . n A 1 14 ILE 14 3 3 ILE ILE A . n A 1 15 THR 15 4 4 THR THR A . n A 1 16 ALA 16 5 5 ALA ALA A . n A 1 17 TYR 17 6 6 TYR TYR A . n A 1 18 ALA 18 7 7 ALA ALA A . n A 1 19 GLN 19 8 8 GLN GLN A . n A 1 20 GLN 20 9 9 GLN GLN A . n A 1 21 THR 21 10 10 THR THR A . n A 1 22 ARG 22 11 11 ARG ARG A . n A 1 23 GLY 23 12 12 GLY GLY A . n A 1 24 LEU 24 13 13 LEU LEU A . n A 1 25 LEU 25 14 14 LEU LEU A . n A 1 26 GLY 26 15 15 GLY GLY A . n A 1 27 CYS 27 16 16 CYS CYS A . n A 1 28 ILE 28 17 17 ILE ILE A . n A 1 29 ILE 29 18 18 ILE ILE A . n A 1 30 THR 30 19 19 THR THR A . n A 1 31 SER 31 20 20 SER SER A . n A 1 32 LEU 32 21 21 LEU LEU A . n A 1 33 THR 33 22 22 THR THR A . n A 1 34 GLY 34 23 23 GLY GLY A . n A 1 35 ARG 35 24 24 ARG ARG A . n A 1 36 ASP 36 25 25 ASP ASP A . n A 1 37 LYS 37 26 26 LYS LYS A . n A 1 38 ASN 38 27 27 ASN ASN A . n A 1 39 GLN 39 28 28 GLN GLN A . n A 1 40 VAL 40 29 29 VAL VAL A . n A 1 41 GLU 41 30 30 GLU GLU A . n A 1 42 GLY 42 31 31 GLY GLY A . n A 1 43 GLU 43 32 32 GLU GLU A . n A 1 44 VAL 44 33 33 VAL VAL A . n A 1 45 GLN 45 34 34 GLN GLN A . n A 1 46 ILE 46 35 35 ILE ILE A . n A 1 47 VAL 47 36 36 VAL VAL A . n A 1 48 SER 48 37 37 SER SER A . n A 1 49 THR 49 38 38 THR THR A . n A 1 50 ALA 50 39 39 ALA ALA A . n A 1 51 THR 51 40 40 THR THR A . n A 1 52 GLN 52 41 41 GLN GLN A . n A 1 53 THR 53 42 42 THR THR A . n A 1 54 PHE 54 43 43 PHE PHE A . n A 1 55 LEU 55 44 44 LEU LEU A . n A 1 56 ALA 56 45 45 ALA ALA A . n A 1 57 THR 57 46 46 THR THR A . n A 1 58 CYS 58 47 47 CYS CYS A . n A 1 59 ILE 59 48 48 ILE ILE A . n A 1 60 ASN 60 49 49 ASN ASN A . n A 1 61 GLY 61 50 50 GLY GLY A . n A 1 62 VAL 62 51 51 VAL VAL A . n A 1 63 CYS 63 52 52 CYS CYS A . n A 1 64 TRP 64 53 53 TRP TRP A . n A 1 65 THR 65 54 54 THR THR A . n A 1 66 VAL 66 55 55 VAL VAL A . n A 1 67 TYR 67 56 56 TYR TYR A . n A 1 68 HIS 68 57 57 HIS HIS A . n A 1 69 GLY 69 58 58 GLY GLY A . n A 1 70 ALA 70 59 59 ALA ALA A . n A 1 71 GLY 71 60 60 GLY GLY A . n A 1 72 THR 72 61 61 THR THR A . n A 1 73 ARG 73 62 62 ARG ARG A . n A 1 74 THR 74 63 63 THR THR A . n A 1 75 ILE 75 64 64 ILE ILE A . n A 1 76 ALA 76 65 65 ALA ALA A . n A 1 77 SER 77 66 66 SER SER A . n A 1 78 PRO 78 67 67 PRO PRO A . n A 1 79 LYS 79 68 68 LYS LYS A . n A 1 80 GLY 80 69 69 GLY GLY A . n A 1 81 PRO 81 70 70 PRO PRO A . n A 1 82 VAL 82 71 71 VAL VAL A . n A 1 83 ILE 83 72 72 ILE ILE A . n A 1 84 GLN 84 73 73 GLN GLN A . n A 1 85 MET 85 74 74 MET MET A . n A 1 86 TYR 86 75 75 TYR TYR A . n A 1 87 THR 87 76 76 THR THR A . n A 1 88 ASN 88 77 77 ASN ASN A . n A 1 89 VAL 89 78 78 VAL VAL A . n A 1 90 ASP 90 79 79 ASP ASP A . n A 1 91 GLN 91 80 80 GLN GLN A . n A 1 92 ASP 92 81 81 ASP ASP A . n A 1 93 LEU 93 82 82 LEU LEU A . n A 1 94 VAL 94 83 83 VAL VAL A . n A 1 95 GLY 95 84 84 GLY GLY A . n A 1 96 TRP 96 85 85 TRP TRP A . n A 1 97 PRO 97 86 86 PRO PRO A . n A 1 98 ALA 98 87 87 ALA ALA A . n A 1 99 PRO 99 88 88 PRO PRO A . n A 1 100 GLN 100 89 89 GLN GLN A . n A 1 101 GLY 101 90 90 GLY GLY A . n A 1 102 SER 102 91 91 SER SER A . n A 1 103 ARG 103 92 92 ARG ARG A . n A 1 104 SER 104 93 93 SER SER A . n A 1 105 LEU 105 94 94 LEU LEU A . n A 1 106 THR 106 95 95 THR THR A . n A 1 107 PRO 107 96 96 PRO PRO A . n A 1 108 CYS 108 97 97 CYS CYS A . n A 1 109 THR 109 98 98 THR THR A . n A 1 110 CYS 110 99 99 CYS CYS A . n A 1 111 GLY 111 100 100 GLY GLY A . n A 1 112 SER 112 101 101 SER SER A . n A 1 113 SER 113 102 102 SER SER A . n A 1 114 ASP 114 103 103 ASP ASP A . n A 1 115 LEU 115 104 104 LEU LEU A . n A 1 116 TYR 116 105 105 TYR TYR A . n A 1 117 LEU 117 106 106 LEU LEU A . n A 1 118 VAL 118 107 107 VAL VAL A . n A 1 119 THR 119 108 108 THR THR A . n A 1 120 ARG 120 109 109 ARG ARG A . n A 1 121 HIS 121 110 110 HIS HIS A . n A 1 122 ALA 122 111 111 ALA ALA A . n A 1 123 ASP 123 112 112 ASP ASP A . n A 1 124 VAL 124 113 113 VAL VAL A . n A 1 125 ILE 125 114 114 ILE ILE A . n A 1 126 PRO 126 115 115 PRO PRO A . n A 1 127 VAL 127 116 116 VAL VAL A . n A 1 128 ARG 128 117 117 ARG ARG A . n A 1 129 ARG 129 118 118 ARG ARG A . n A 1 130 ARG 130 119 119 ARG ARG A . n A 1 131 GLY 131 120 120 GLY GLY A . n A 1 132 ASP 132 121 121 ASP ASP A . n A 1 133 SER 133 122 122 SER SER A . n A 1 134 ARG 134 123 123 ARG ARG A . n A 1 135 GLY 135 124 124 GLY GLY A . n A 1 136 SER 136 125 125 SER SER A . n A 1 137 LEU 137 126 126 LEU LEU A . n A 1 138 LEU 138 127 127 LEU LEU A . n A 1 139 SER 139 128 128 SER SER A . n A 1 140 PRO 140 129 129 PRO PRO A . n A 1 141 ARG 141 130 130 ARG ARG A . n A 1 142 PRO 142 131 131 PRO PRO A . n A 1 143 ILE 143 132 132 ILE ILE A . n A 1 144 SER 144 133 133 SER SER A . n A 1 145 TYR 145 134 134 TYR TYR A . n A 1 146 LEU 146 135 135 LEU LEU A . n A 1 147 LYS 147 136 136 LYS LYS A . n A 1 148 GLY 148 137 137 GLY GLY A . n A 1 149 SER 149 138 138 SER SER A . n A 1 150 SER 150 139 139 SER SER A . n A 1 151 GLY 151 140 140 GLY GLY A . n A 1 152 GLY 152 141 141 GLY GLY A . n A 1 153 PRO 153 142 142 PRO PRO A . n A 1 154 LEU 154 143 143 LEU LEU A . n A 1 155 LEU 155 144 144 LEU LEU A . n A 1 156 CYS 156 145 145 CYS CYS A . n A 1 157 PRO 157 146 146 PRO PRO A . n A 1 158 ALA 158 147 147 ALA ALA A . n A 1 159 GLY 159 148 148 GLY GLY A . n A 1 160 HIS 160 149 149 HIS HIS A . n A 1 161 ALA 161 150 150 ALA ALA A . n A 1 162 VAL 162 151 151 VAL VAL A . n A 1 163 GLY 163 152 152 GLY GLY A . n A 1 164 LEU 164 153 153 LEU LEU A . n A 1 165 PHE 165 154 154 PHE PHE A . n A 1 166 ARG 166 155 155 ARG ARG A . n A 1 167 ALA 167 156 156 ALA ALA A . n A 1 168 ALA 168 157 157 ALA ALA A . n A 1 169 VAL 169 158 158 VAL VAL A . n A 1 170 CYS 170 159 159 CYS CYS A . n A 1 171 THR 171 160 160 THR THR A . n A 1 172 ARG 172 161 161 ARG ARG A . n A 1 173 GLY 173 162 162 GLY GLY A . n A 1 174 VAL 174 163 163 VAL VAL A . n A 1 175 ALA 175 164 164 ALA ALA A . n A 1 176 LYS 176 165 165 LYS LYS A . n A 1 177 ALA 177 166 166 ALA ALA A . n A 1 178 VAL 178 167 167 VAL VAL A . n A 1 179 ASP 179 168 168 ASP ASP A . n A 1 180 PHE 180 169 169 PHE PHE A . n A 1 181 ILE 181 170 170 ILE ILE A . n A 1 182 PRO 182 171 171 PRO PRO A . n A 1 183 VAL 183 172 172 VAL VAL A . n A 1 184 GLU 184 173 173 GLU GLU A . n A 1 185 ASN 185 174 174 ASN ASN A . n A 1 186 LEU 186 175 175 LEU LEU A . n A 1 187 GLU 187 176 176 GLU GLU A . n A 1 188 THR 188 177 177 THR THR A . n A 1 189 THR 189 178 178 THR THR A . n A 1 190 MET 190 179 179 MET MET A . n A 1 191 ARG 191 180 180 ARG ARG A . n A 1 192 SER 192 181 181 SER SER A . n A 1 193 GLY 193 182 ? ? ? A . n A 1 194 SER 194 183 ? ? ? A . n A 1 195 HIS 195 184 ? ? ? A . n A 1 196 HIS 196 185 ? ? ? A . n A 1 197 HIS 197 186 ? ? ? A . n A 1 198 HIS 198 187 ? ? ? A . n A 1 199 HIS 199 188 ? ? ? A . n A 1 200 HIS 200 189 ? ? ? A . n B 2 1 LYS 1 19 ? ? ? B . n B 2 2 LYS 2 20 20 LYS LYS B . n B 2 3 GLY 3 21 21 GLY GLY B . n B 2 4 SER 4 22 22 SER SER B . n B 2 5 VAL 5 23 23 VAL VAL B . n B 2 6 VAL 6 24 24 VAL VAL B . n B 2 7 ILE 7 25 25 ILE ILE B . n B 2 8 VAL 8 26 26 VAL VAL B . n B 2 9 GLY 9 27 27 GLY GLY B . n B 2 10 ARG 10 28 28 ARG ARG B . n B 2 11 ILE 11 29 29 ILE ILE B . n B 2 12 VAL 12 30 30 VAL VAL B . n B 2 13 LEU 13 31 31 LEU LEU B . n B 2 14 SER 14 32 32 SER SER B . n B 2 15 GLY 15 33 33 GLY GLY B . n B 2 16 LYS 16 34 34 LYS LYS B . n B 2 17 PRO 17 35 35 PRO PRO B . n B 2 18 ALA 18 36 36 ALA ALA B . n B 2 19 ILE 19 37 37 ILE ILE B . n B 2 20 ILE 20 38 38 ILE ILE B . n B 2 21 PRO 21 39 39 PRO PRO B . n B 2 22 LYS 22 40 40 LYS LYS B . n B 2 23 LYS 23 41 41 LYS LYS B . n C 1 1 MET 1 -10 ? ? ? C . n C 1 2 ALA 2 -9 ? ? ? C . n C 1 3 SER 3 -8 ? ? ? C . n C 1 4 MET 4 -7 ? ? ? C . n C 1 5 THR 5 -6 ? ? ? C . n C 1 6 GLY 6 -5 ? ? ? C . n C 1 7 GLY 7 -4 ? ? ? C . n C 1 8 GLN 8 -3 ? ? ? C . n C 1 9 GLN 9 -2 ? ? ? C . n C 1 10 MET 10 -1 ? ? ? C . n C 1 11 GLY 11 0 ? ? ? C . n C 1 12 ALA 12 1 ? ? ? C . n C 1 13 PRO 13 2 ? ? ? C . n C 1 14 ILE 14 3 ? ? ? C . n C 1 15 THR 15 4 ? ? ? C . n C 1 16 ALA 16 5 ? ? ? C . n C 1 17 TYR 17 6 ? ? ? C . n C 1 18 ALA 18 7 ? ? ? C . n C 1 19 GLN 19 8 ? ? ? C . n C 1 20 GLN 20 9 ? ? ? C . n C 1 21 THR 21 10 ? ? ? C . n C 1 22 ARG 22 11 ? ? ? C . n C 1 23 GLY 23 12 ? ? ? C . n C 1 24 LEU 24 13 ? ? ? C . n C 1 25 LEU 25 14 ? ? ? C . n C 1 26 GLY 26 15 ? ? ? C . n C 1 27 CYS 27 16 ? ? ? C . n C 1 28 ILE 28 17 ? ? ? C . n C 1 29 ILE 29 18 ? ? ? C . n C 1 30 THR 30 19 ? ? ? C . n C 1 31 SER 31 20 ? ? ? C . n C 1 32 LEU 32 21 ? ? ? C . n C 1 33 THR 33 22 ? ? ? C . n C 1 34 GLY 34 23 ? ? ? C . n C 1 35 ARG 35 24 ? ? ? C . n C 1 36 ASP 36 25 ? ? ? C . n C 1 37 LYS 37 26 ? ? ? C . n C 1 38 ASN 38 27 ? ? ? C . n C 1 39 GLN 39 28 ? ? ? C . n C 1 40 VAL 40 29 29 VAL VAL C . n C 1 41 GLU 41 30 30 GLU GLU C . n C 1 42 GLY 42 31 31 GLY GLY C . n C 1 43 GLU 43 32 32 GLU GLU C . n C 1 44 VAL 44 33 33 VAL VAL C . n C 1 45 GLN 45 34 34 GLN GLN C . n C 1 46 ILE 46 35 35 ILE ILE C . n C 1 47 VAL 47 36 36 VAL VAL C . n C 1 48 SER 48 37 37 SER SER C . n C 1 49 THR 49 38 38 THR THR C . n C 1 50 ALA 50 39 39 ALA ALA C . n C 1 51 THR 51 40 40 THR THR C . n C 1 52 GLN 52 41 41 GLN GLN C . n C 1 53 THR 53 42 42 THR THR C . n C 1 54 PHE 54 43 43 PHE PHE C . n C 1 55 LEU 55 44 44 LEU LEU C . n C 1 56 ALA 56 45 45 ALA ALA C . n C 1 57 THR 57 46 46 THR THR C . n C 1 58 CYS 58 47 47 CYS CYS C . n C 1 59 ILE 59 48 48 ILE ILE C . n C 1 60 ASN 60 49 49 ASN ASN C . n C 1 61 GLY 61 50 50 GLY GLY C . n C 1 62 VAL 62 51 51 VAL VAL C . n C 1 63 CYS 63 52 52 CYS CYS C . n C 1 64 TRP 64 53 53 TRP TRP C . n C 1 65 THR 65 54 54 THR THR C . n C 1 66 VAL 66 55 55 VAL VAL C . n C 1 67 TYR 67 56 56 TYR TYR C . n C 1 68 HIS 68 57 57 HIS HIS C . n C 1 69 GLY 69 58 58 GLY GLY C . n C 1 70 ALA 70 59 59 ALA ALA C . n C 1 71 GLY 71 60 60 GLY GLY C . n C 1 72 THR 72 61 61 THR THR C . n C 1 73 ARG 73 62 62 ARG ARG C . n C 1 74 THR 74 63 63 THR THR C . n C 1 75 ILE 75 64 64 ILE ILE C . n C 1 76 ALA 76 65 65 ALA ALA C . n C 1 77 SER 77 66 66 SER SER C . n C 1 78 PRO 78 67 67 PRO PRO C . n C 1 79 LYS 79 68 68 LYS LYS C . n C 1 80 GLY 80 69 69 GLY GLY C . n C 1 81 PRO 81 70 70 PRO PRO C . n C 1 82 VAL 82 71 71 VAL VAL C . n C 1 83 ILE 83 72 72 ILE ILE C . n C 1 84 GLN 84 73 73 GLN GLN C . n C 1 85 MET 85 74 74 MET MET C . n C 1 86 TYR 86 75 75 TYR TYR C . n C 1 87 THR 87 76 76 THR THR C . n C 1 88 ASN 88 77 77 ASN ASN C . n C 1 89 VAL 89 78 78 VAL VAL C . n C 1 90 ASP 90 79 79 ASP ASP C . n C 1 91 GLN 91 80 80 GLN GLN C . n C 1 92 ASP 92 81 81 ASP ASP C . n C 1 93 LEU 93 82 82 LEU LEU C . n C 1 94 VAL 94 83 83 VAL VAL C . n C 1 95 GLY 95 84 84 GLY GLY C . n C 1 96 TRP 96 85 85 TRP TRP C . n C 1 97 PRO 97 86 86 PRO PRO C . n C 1 98 ALA 98 87 87 ALA ALA C . n C 1 99 PRO 99 88 88 PRO PRO C . n C 1 100 GLN 100 89 89 GLN GLN C . n C 1 101 GLY 101 90 90 GLY GLY C . n C 1 102 SER 102 91 91 SER SER C . n C 1 103 ARG 103 92 92 ARG ARG C . n C 1 104 SER 104 93 93 SER SER C . n C 1 105 LEU 105 94 94 LEU LEU C . n C 1 106 THR 106 95 95 THR THR C . n C 1 107 PRO 107 96 96 PRO PRO C . n C 1 108 CYS 108 97 97 CYS CYS C . n C 1 109 THR 109 98 98 THR THR C . n C 1 110 CYS 110 99 99 CYS CYS C . n C 1 111 GLY 111 100 100 GLY GLY C . n C 1 112 SER 112 101 101 SER SER C . n C 1 113 SER 113 102 102 SER SER C . n C 1 114 ASP 114 103 103 ASP ASP C . n C 1 115 LEU 115 104 104 LEU LEU C . n C 1 116 TYR 116 105 105 TYR TYR C . n C 1 117 LEU 117 106 106 LEU LEU C . n C 1 118 VAL 118 107 107 VAL VAL C . n C 1 119 THR 119 108 108 THR THR C . n C 1 120 ARG 120 109 109 ARG ARG C . n C 1 121 HIS 121 110 110 HIS HIS C . n C 1 122 ALA 122 111 111 ALA ALA C . n C 1 123 ASP 123 112 112 ASP ASP C . n C 1 124 VAL 124 113 113 VAL VAL C . n C 1 125 ILE 125 114 114 ILE ILE C . n C 1 126 PRO 126 115 115 PRO PRO C . n C 1 127 VAL 127 116 116 VAL VAL C . n C 1 128 ARG 128 117 117 ARG ARG C . n C 1 129 ARG 129 118 118 ARG ARG C . n C 1 130 ARG 130 119 119 ARG ARG C . n C 1 131 GLY 131 120 120 GLY GLY C . n C 1 132 ASP 132 121 121 ASP ASP C . n C 1 133 SER 133 122 122 SER SER C . n C 1 134 ARG 134 123 123 ARG ARG C . n C 1 135 GLY 135 124 124 GLY GLY C . n C 1 136 SER 136 125 125 SER SER C . n C 1 137 LEU 137 126 126 LEU LEU C . n C 1 138 LEU 138 127 127 LEU LEU C . n C 1 139 SER 139 128 128 SER SER C . n C 1 140 PRO 140 129 129 PRO PRO C . n C 1 141 ARG 141 130 130 ARG ARG C . n C 1 142 PRO 142 131 131 PRO PRO C . n C 1 143 ILE 143 132 132 ILE ILE C . n C 1 144 SER 144 133 133 SER SER C . n C 1 145 TYR 145 134 134 TYR TYR C . n C 1 146 LEU 146 135 135 LEU LEU C . n C 1 147 LYS 147 136 136 LYS LYS C . n C 1 148 GLY 148 137 137 GLY GLY C . n C 1 149 SER 149 138 138 SER SER C . n C 1 150 SER 150 139 139 SER SER C . n C 1 151 GLY 151 140 140 GLY GLY C . n C 1 152 GLY 152 141 141 GLY GLY C . n C 1 153 PRO 153 142 142 PRO PRO C . n C 1 154 LEU 154 143 143 LEU LEU C . n C 1 155 LEU 155 144 144 LEU LEU C . n C 1 156 CYS 156 145 145 CYS CYS C . n C 1 157 PRO 157 146 146 PRO PRO C . n C 1 158 ALA 158 147 147 ALA ALA C . n C 1 159 GLY 159 148 148 GLY GLY C . n C 1 160 HIS 160 149 149 HIS HIS C . n C 1 161 ALA 161 150 150 ALA ALA C . n C 1 162 VAL 162 151 151 VAL VAL C . n C 1 163 GLY 163 152 152 GLY GLY C . n C 1 164 LEU 164 153 153 LEU LEU C . n C 1 165 PHE 165 154 154 PHE PHE C . n C 1 166 ARG 166 155 155 ARG ARG C . n C 1 167 ALA 167 156 156 ALA ALA C . n C 1 168 ALA 168 157 157 ALA ALA C . n C 1 169 VAL 169 158 158 VAL VAL C . n C 1 170 CYS 170 159 159 CYS CYS C . n C 1 171 THR 171 160 160 THR THR C . n C 1 172 ARG 172 161 161 ARG ARG C . n C 1 173 GLY 173 162 162 GLY GLY C . n C 1 174 VAL 174 163 163 VAL VAL C . n C 1 175 ALA 175 164 164 ALA ALA C . n C 1 176 LYS 176 165 165 LYS LYS C . n C 1 177 ALA 177 166 166 ALA ALA C . n C 1 178 VAL 178 167 167 VAL VAL C . n C 1 179 ASP 179 168 168 ASP ASP C . n C 1 180 PHE 180 169 169 PHE PHE C . n C 1 181 ILE 181 170 170 ILE ILE C . n C 1 182 PRO 182 171 171 PRO PRO C . n C 1 183 VAL 183 172 172 VAL VAL C . n C 1 184 GLU 184 173 173 GLU GLU C . n C 1 185 ASN 185 174 174 ASN ASN C . n C 1 186 LEU 186 175 175 LEU LEU C . n C 1 187 GLU 187 176 176 GLU GLU C . n C 1 188 THR 188 177 177 THR THR C . n C 1 189 THR 189 178 178 THR THR C . n C 1 190 MET 190 179 179 MET MET C . n C 1 191 ARG 191 180 ? ? ? C . n C 1 192 SER 192 181 ? ? ? C . n C 1 193 GLY 193 182 ? ? ? C . n C 1 194 SER 194 183 ? ? ? C . n C 1 195 HIS 195 184 ? ? ? C . n C 1 196 HIS 196 185 ? ? ? C . n C 1 197 HIS 197 186 ? ? ? C . n C 1 198 HIS 198 187 ? ? ? C . n C 1 199 HIS 199 188 ? ? ? C . n C 1 200 HIS 200 189 ? ? ? C . n D 2 1 LYS 1 19 ? ? ? D . n D 2 2 LYS 2 20 ? ? ? D . n D 2 3 GLY 3 21 21 GLY GLY D . n D 2 4 SER 4 22 22 SER SER D . n D 2 5 VAL 5 23 23 VAL VAL D . n D 2 6 VAL 6 24 24 VAL VAL D . n D 2 7 ILE 7 25 25 ILE ILE D . n D 2 8 VAL 8 26 26 VAL VAL D . n D 2 9 GLY 9 27 27 GLY GLY D . n D 2 10 ARG 10 28 28 ARG ARG D . n D 2 11 ILE 11 29 29 ILE ILE D . n D 2 12 VAL 12 30 30 VAL VAL D . n D 2 13 LEU 13 31 31 LEU LEU D . n D 2 14 SER 14 32 32 SER SER D . n D 2 15 GLY 15 33 33 GLY GLY D . n D 2 16 LYS 16 34 34 LYS LYS D . n D 2 17 PRO 17 35 35 PRO PRO D . n D 2 18 ALA 18 36 36 ALA ALA D . n D 2 19 ILE 19 37 ? ? ? D . n D 2 20 ILE 20 38 ? ? ? D . n D 2 21 PRO 21 39 ? ? ? D . n D 2 22 LYS 22 40 ? ? ? D . n D 2 23 LYS 23 41 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN 1 901 901 ZN ZN A . F 4 BE8 1 401 401 BE8 BE8 A . G 3 ZN 1 901 901 ZN ZN C . H 5 HOH 1 190 190 HOH HOH A . H 5 HOH 2 191 4 HOH HOH A . H 5 HOH 3 192 192 HOH HOH A . H 5 HOH 4 193 6 HOH HOH A . H 5 HOH 5 194 194 HOH HOH A . H 5 HOH 6 195 195 HOH HOH A . H 5 HOH 7 196 196 HOH HOH A . H 5 HOH 8 197 7 HOH HOH A . H 5 HOH 9 198 198 HOH HOH A . H 5 HOH 10 199 10 HOH HOH A . H 5 HOH 11 200 12 HOH HOH A . H 5 HOH 12 201 13 HOH HOH A . H 5 HOH 13 202 14 HOH HOH A . H 5 HOH 14 203 203 HOH HOH A . H 5 HOH 15 204 204 HOH HOH A . H 5 HOH 16 205 205 HOH HOH A . H 5 HOH 17 206 206 HOH HOH A . H 5 HOH 18 207 15 HOH HOH A . H 5 HOH 19 208 208 HOH HOH A . H 5 HOH 20 209 16 HOH HOH A . H 5 HOH 21 210 210 HOH HOH A . H 5 HOH 22 211 21 HOH HOH A . H 5 HOH 23 212 212 HOH HOH A . H 5 HOH 24 213 22 HOH HOH A . H 5 HOH 25 214 214 HOH HOH A . H 5 HOH 26 215 215 HOH HOH A . H 5 HOH 27 216 216 HOH HOH A . H 5 HOH 28 217 23 HOH HOH A . H 5 HOH 29 218 24 HOH HOH A . H 5 HOH 30 219 25 HOH HOH A . H 5 HOH 31 220 28 HOH HOH A . H 5 HOH 32 221 29 HOH HOH A . H 5 HOH 33 222 222 HOH HOH A . H 5 HOH 34 223 30 HOH HOH A . H 5 HOH 35 224 224 HOH HOH A . H 5 HOH 36 225 225 HOH HOH A . H 5 HOH 37 226 34 HOH HOH A . H 5 HOH 38 227 36 HOH HOH A . H 5 HOH 39 228 228 HOH HOH A . H 5 HOH 40 229 38 HOH HOH A . H 5 HOH 41 230 39 HOH HOH A . H 5 HOH 42 231 231 HOH HOH A . H 5 HOH 43 232 232 HOH HOH A . H 5 HOH 44 233 40 HOH HOH A . H 5 HOH 45 234 41 HOH HOH A . H 5 HOH 46 235 42 HOH HOH A . H 5 HOH 47 236 43 HOH HOH A . H 5 HOH 48 237 237 HOH HOH A . H 5 HOH 49 238 238 HOH HOH A . H 5 HOH 50 239 50 HOH HOH A . H 5 HOH 51 240 240 HOH HOH A . H 5 HOH 52 241 57 HOH HOH A . H 5 HOH 53 242 59 HOH HOH A . H 5 HOH 54 243 243 HOH HOH A . H 5 HOH 55 244 61 HOH HOH A . H 5 HOH 56 245 245 HOH HOH A . H 5 HOH 57 246 246 HOH HOH A . H 5 HOH 58 247 63 HOH HOH A . H 5 HOH 59 248 66 HOH HOH A . H 5 HOH 60 249 249 HOH HOH A . H 5 HOH 61 250 250 HOH HOH A . H 5 HOH 62 251 69 HOH HOH A . H 5 HOH 63 252 70 HOH HOH A . H 5 HOH 64 253 71 HOH HOH A . H 5 HOH 65 254 254 HOH HOH A . H 5 HOH 66 255 255 HOH HOH A . H 5 HOH 67 256 256 HOH HOH A . H 5 HOH 68 257 72 HOH HOH A . H 5 HOH 69 258 74 HOH HOH A . H 5 HOH 70 259 77 HOH HOH A . H 5 HOH 71 260 81 HOH HOH A . H 5 HOH 72 261 82 HOH HOH A . H 5 HOH 73 262 83 HOH HOH A . H 5 HOH 74 263 84 HOH HOH A . H 5 HOH 75 264 85 HOH HOH A . H 5 HOH 76 265 86 HOH HOH A . H 5 HOH 77 266 87 HOH HOH A . H 5 HOH 78 267 88 HOH HOH A . H 5 HOH 79 268 90 HOH HOH A . H 5 HOH 80 269 91 HOH HOH A . H 5 HOH 81 270 93 HOH HOH A . H 5 HOH 82 271 95 HOH HOH A . H 5 HOH 83 272 96 HOH HOH A . H 5 HOH 84 273 100 HOH HOH A . H 5 HOH 85 274 102 HOH HOH A . H 5 HOH 86 275 103 HOH HOH A . H 5 HOH 87 276 104 HOH HOH A . H 5 HOH 88 277 105 HOH HOH A . H 5 HOH 89 278 106 HOH HOH A . H 5 HOH 90 279 107 HOH HOH A . H 5 HOH 91 280 109 HOH HOH A . H 5 HOH 92 281 112 HOH HOH A . H 5 HOH 93 282 114 HOH HOH A . H 5 HOH 94 283 115 HOH HOH A . H 5 HOH 95 284 119 HOH HOH A . H 5 HOH 96 285 121 HOH HOH A . H 5 HOH 97 286 122 HOH HOH A . H 5 HOH 98 287 124 HOH HOH A . H 5 HOH 99 288 125 HOH HOH A . H 5 HOH 100 289 126 HOH HOH A . H 5 HOH 101 290 127 HOH HOH A . H 5 HOH 102 291 131 HOH HOH A . H 5 HOH 103 292 134 HOH HOH A . H 5 HOH 104 293 135 HOH HOH A . H 5 HOH 105 294 136 HOH HOH A . H 5 HOH 106 295 137 HOH HOH A . H 5 HOH 107 296 138 HOH HOH A . H 5 HOH 108 297 144 HOH HOH A . H 5 HOH 109 298 147 HOH HOH A . H 5 HOH 110 299 148 HOH HOH A . H 5 HOH 111 300 149 HOH HOH A . H 5 HOH 112 301 150 HOH HOH A . H 5 HOH 113 302 152 HOH HOH A . H 5 HOH 114 303 154 HOH HOH A . H 5 HOH 115 304 156 HOH HOH A . H 5 HOH 116 305 157 HOH HOH A . H 5 HOH 117 306 159 HOH HOH A . H 5 HOH 118 307 161 HOH HOH A . H 5 HOH 119 308 163 HOH HOH A . H 5 HOH 120 309 164 HOH HOH A . H 5 HOH 121 310 167 HOH HOH A . H 5 HOH 122 311 172 HOH HOH A . H 5 HOH 123 312 173 HOH HOH A . H 5 HOH 124 313 175 HOH HOH A . H 5 HOH 125 314 177 HOH HOH A . H 5 HOH 126 315 178 HOH HOH A . H 5 HOH 127 316 180 HOH HOH A . H 5 HOH 128 317 181 HOH HOH A . H 5 HOH 129 318 182 HOH HOH A . H 5 HOH 130 319 184 HOH HOH A . H 5 HOH 131 320 187 HOH HOH A . H 5 HOH 132 321 188 HOH HOH A . H 5 HOH 133 322 189 HOH HOH A . H 5 HOH 134 323 49 HOH HOH A . H 5 HOH 135 324 54 HOH HOH A . H 5 HOH 136 325 236 HOH HOH A . I 5 HOH 1 3 3 HOH HOH B . I 5 HOH 2 17 17 HOH HOH B . I 5 HOH 3 18 18 HOH HOH B . I 5 HOH 4 53 53 HOH HOH B . I 5 HOH 5 55 55 HOH HOH B . I 5 HOH 6 97 97 HOH HOH B . I 5 HOH 7 128 128 HOH HOH B . I 5 HOH 8 139 139 HOH HOH B . I 5 HOH 9 179 179 HOH HOH B . I 5 HOH 10 218 218 HOH HOH B . I 5 HOH 11 229 229 HOH HOH B . I 5 HOH 12 234 234 HOH HOH B . J 5 HOH 1 190 1 HOH HOH C . J 5 HOH 2 191 191 HOH HOH C . J 5 HOH 3 192 2 HOH HOH C . J 5 HOH 4 193 193 HOH HOH C . J 5 HOH 5 194 5 HOH HOH C . J 5 HOH 6 195 8 HOH HOH C . J 5 HOH 7 196 11 HOH HOH C . J 5 HOH 8 197 197 HOH HOH C . J 5 HOH 9 198 19 HOH HOH C . J 5 HOH 10 199 26 HOH HOH C . J 5 HOH 11 200 200 HOH HOH C . J 5 HOH 12 201 201 HOH HOH C . J 5 HOH 13 202 202 HOH HOH C . J 5 HOH 14 203 27 HOH HOH C . J 5 HOH 15 204 31 HOH HOH C . J 5 HOH 16 205 32 HOH HOH C . J 5 HOH 17 206 35 HOH HOH C . J 5 HOH 18 207 207 HOH HOH C . J 5 HOH 19 208 37 HOH HOH C . J 5 HOH 20 209 209 HOH HOH C . J 5 HOH 21 210 44 HOH HOH C . J 5 HOH 22 211 211 HOH HOH C . J 5 HOH 23 212 45 HOH HOH C . J 5 HOH 24 213 46 HOH HOH C . J 5 HOH 25 214 47 HOH HOH C . J 5 HOH 26 215 48 HOH HOH C . J 5 HOH 27 216 51 HOH HOH C . J 5 HOH 28 217 217 HOH HOH C . J 5 HOH 29 218 52 HOH HOH C . J 5 HOH 30 219 219 HOH HOH C . J 5 HOH 31 220 220 HOH HOH C . J 5 HOH 32 221 56 HOH HOH C . J 5 HOH 33 222 58 HOH HOH C . J 5 HOH 34 223 60 HOH HOH C . J 5 HOH 35 224 67 HOH HOH C . J 5 HOH 36 225 68 HOH HOH C . J 5 HOH 37 226 226 HOH HOH C . J 5 HOH 38 227 227 HOH HOH C . J 5 HOH 39 228 73 HOH HOH C . J 5 HOH 40 229 75 HOH HOH C . J 5 HOH 41 230 230 HOH HOH C . J 5 HOH 42 231 76 HOH HOH C . J 5 HOH 43 232 78 HOH HOH C . J 5 HOH 44 233 233 HOH HOH C . J 5 HOH 45 234 79 HOH HOH C . J 5 HOH 46 235 235 HOH HOH C . J 5 HOH 47 236 89 HOH HOH C . J 5 HOH 48 237 94 HOH HOH C . J 5 HOH 49 238 98 HOH HOH C . J 5 HOH 50 239 239 HOH HOH C . J 5 HOH 51 240 99 HOH HOH C . J 5 HOH 52 241 241 HOH HOH C . J 5 HOH 53 242 242 HOH HOH C . J 5 HOH 54 243 101 HOH HOH C . J 5 HOH 55 244 244 HOH HOH C . J 5 HOH 56 245 108 HOH HOH C . J 5 HOH 57 246 110 HOH HOH C . J 5 HOH 58 247 247 HOH HOH C . J 5 HOH 59 248 248 HOH HOH C . J 5 HOH 60 249 111 HOH HOH C . J 5 HOH 61 250 113 HOH HOH C . J 5 HOH 62 251 251 HOH HOH C . J 5 HOH 63 252 252 HOH HOH C . J 5 HOH 64 253 253 HOH HOH C . J 5 HOH 65 254 116 HOH HOH C . J 5 HOH 66 255 117 HOH HOH C . J 5 HOH 67 256 118 HOH HOH C . J 5 HOH 68 257 257 HOH HOH C . J 5 HOH 69 258 120 HOH HOH C . J 5 HOH 70 259 123 HOH HOH C . J 5 HOH 71 260 129 HOH HOH C . J 5 HOH 72 261 130 HOH HOH C . J 5 HOH 73 262 132 HOH HOH C . J 5 HOH 74 263 133 HOH HOH C . J 5 HOH 75 264 141 HOH HOH C . J 5 HOH 76 265 142 HOH HOH C . J 5 HOH 77 266 143 HOH HOH C . J 5 HOH 78 267 145 HOH HOH C . J 5 HOH 79 268 146 HOH HOH C . J 5 HOH 80 269 151 HOH HOH C . J 5 HOH 81 270 153 HOH HOH C . J 5 HOH 82 271 155 HOH HOH C . J 5 HOH 83 272 158 HOH HOH C . J 5 HOH 84 273 160 HOH HOH C . J 5 HOH 85 274 162 HOH HOH C . J 5 HOH 86 275 165 HOH HOH C . J 5 HOH 87 276 166 HOH HOH C . J 5 HOH 88 277 168 HOH HOH C . J 5 HOH 89 278 169 HOH HOH C . J 5 HOH 90 279 170 HOH HOH C . J 5 HOH 91 280 171 HOH HOH C . J 5 HOH 92 281 174 HOH HOH C . J 5 HOH 93 282 176 HOH HOH C . J 5 HOH 94 283 183 HOH HOH C . J 5 HOH 95 284 185 HOH HOH C . J 5 HOH 96 285 223 HOH HOH C . K 5 HOH 1 9 9 HOH HOH D . K 5 HOH 2 42 20 HOH HOH D . K 5 HOH 3 43 33 HOH HOH D . K 5 HOH 4 62 62 HOH HOH D . K 5 HOH 5 64 64 HOH HOH D . K 5 HOH 6 65 65 HOH HOH D . K 5 HOH 7 80 80 HOH HOH D . K 5 HOH 8 92 92 HOH HOH D . K 5 HOH 9 140 140 HOH HOH D . K 5 HOH 10 186 186 HOH HOH D . K 5 HOH 11 199 199 HOH HOH D . K 5 HOH 12 213 213 HOH HOH D . K 5 HOH 13 221 221 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 X-PLOR 'model building' . ? 2 X-PLOR refinement 98.1 ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 X-PLOR phasing . ? 6 # _cell.entry_id 3EYD _cell.length_a 224.483 _cell.length_b 224.483 _cell.length_c 75.786 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3EYD _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3EYD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.89 _exptl_crystal.density_percent_sol 68.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details '277, then 285' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details ;Crystallization was performed by the vapor diffusion method using hanging drops (4 L protein solution mixed with 4 L (0.75 - 1.00) M NaCl - 0.1 M MES - 0.1 M Na/K PO4, pH 5.6 - 6.2) suspended over 1 mL reservoir solutions of (1.25 - 1.50) M NaCl - 0.1 M MES - 0.1 M Na/K PO4 - 5 mM -mercaptoethanol, pH 5.6-6.2. The trays were set at 4oC for 5-7 days to control nucleation, followed by incubation for 3 weeks at 12oC to maximize crystal growth., VAPOR DIFFUSION, HANGING DROP, temperature 277, then 285K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2004-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3EYD _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.15 _reflns.number_obs 28576 _reflns.number_all 39911 _reflns.percent_possible_obs 71.6 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 20.6 _reflns_shell.Rmerge_I_obs 0.288 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2631 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3EYD _refine.ls_number_reflns_obs 20909 _refine.ls_number_reflns_all 25697 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.180 _refine.ls_R_factor_R_free 0.256 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 2089 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ;HCV NS3(1-181)S139A - NS4a pdb2o8m.ent ; _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model anoistropic _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2727 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 257 _refine_hist.number_atoms_total 3029 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.019 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.476 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.40 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2876 _refine_ls_shell.percent_reflns_obs 40 _refine_ls_shell.R_factor_R_free 0.3443 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 103 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 972 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3EYD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3EYD _struct.title 'Structure of HCV NS3-4A Protease with an Inhibitor Derived from a Boronic Acid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3EYD _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text ;Hepatitis C Virus, NS3 Protease Domain, serine protease, boronic acid inhibitor, Envelope protein, Helicase, Hydrolase, Nucleotide-binding, RNA replication, Transmembrane, VIRAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9ELS8_9HEPC Q9ELS8 1 ;APITAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTATQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDQ DLVGWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRQGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGLFRAAVCT RGVAKAVDFIPVENLETTMRS ; 1027 ? 2 UNP Q9ELS8_9HEPC Q9ELS8 2 GCVVIVGRIVLSGKPAIIP 1678 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3EYD A 12 ? 192 ? Q9ELS8 1027 ? 1207 ? 1 181 2 2 3EYD B 3 ? 21 ? Q9ELS8 1678 ? 1696 ? 21 39 3 1 3EYD C 12 ? 192 ? Q9ELS8 1027 ? 1207 ? 1 181 4 2 3EYD D 3 ? 21 ? Q9ELS8 1678 ? 1696 ? 21 39 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3EYD MET A 1 ? UNP Q9ELS8 ? ? 'expression tag' -10 1 1 3EYD ALA A 2 ? UNP Q9ELS8 ? ? 'expression tag' -9 2 1 3EYD SER A 3 ? UNP Q9ELS8 ? ? 'expression tag' -8 3 1 3EYD MET A 4 ? UNP Q9ELS8 ? ? 'expression tag' -7 4 1 3EYD THR A 5 ? UNP Q9ELS8 ? ? 'expression tag' -6 5 1 3EYD GLY A 6 ? UNP Q9ELS8 ? ? 'expression tag' -5 6 1 3EYD GLY A 7 ? UNP Q9ELS8 ? ? 'expression tag' -4 7 1 3EYD GLN A 8 ? UNP Q9ELS8 ? ? 'expression tag' -3 8 1 3EYD GLN A 9 ? UNP Q9ELS8 ? ? 'expression tag' -2 9 1 3EYD MET A 10 ? UNP Q9ELS8 ? ? 'expression tag' -1 10 1 3EYD GLY A 11 ? UNP Q9ELS8 ? ? 'expression tag' 0 11 1 3EYD ARG A 130 ? UNP Q9ELS8 GLN 1145 conflict 119 12 1 3EYD GLY A 193 ? UNP Q9ELS8 ? ? 'expression tag' 182 13 1 3EYD SER A 194 ? UNP Q9ELS8 ? ? 'expression tag' 183 14 1 3EYD HIS A 195 ? UNP Q9ELS8 ? ? 'expression tag' 184 15 1 3EYD HIS A 196 ? UNP Q9ELS8 ? ? 'expression tag' 185 16 1 3EYD HIS A 197 ? UNP Q9ELS8 ? ? 'expression tag' 186 17 1 3EYD HIS A 198 ? UNP Q9ELS8 ? ? 'expression tag' 187 18 1 3EYD HIS A 199 ? UNP Q9ELS8 ? ? 'expression tag' 188 19 1 3EYD HIS A 200 ? UNP Q9ELS8 ? ? 'expression tag' 189 20 2 3EYD LYS B 1 ? UNP Q9ELS8 ? ? 'expression tag' 19 21 2 3EYD LYS B 2 ? UNP Q9ELS8 ? ? 'expression tag' 20 22 2 3EYD SER B 4 ? UNP Q9ELS8 CYS 1679 'engineered mutation' 22 23 2 3EYD LYS B 22 ? UNP Q9ELS8 ? ? 'expression tag' 40 24 2 3EYD LYS B 23 ? UNP Q9ELS8 ? ? 'expression tag' 41 25 3 3EYD MET C 1 ? UNP Q9ELS8 ? ? 'expression tag' -10 26 3 3EYD ALA C 2 ? UNP Q9ELS8 ? ? 'expression tag' -9 27 3 3EYD SER C 3 ? UNP Q9ELS8 ? ? 'expression tag' -8 28 3 3EYD MET C 4 ? UNP Q9ELS8 ? ? 'expression tag' -7 29 3 3EYD THR C 5 ? UNP Q9ELS8 ? ? 'expression tag' -6 30 3 3EYD GLY C 6 ? UNP Q9ELS8 ? ? 'expression tag' -5 31 3 3EYD GLY C 7 ? UNP Q9ELS8 ? ? 'expression tag' -4 32 3 3EYD GLN C 8 ? UNP Q9ELS8 ? ? 'expression tag' -3 33 3 3EYD GLN C 9 ? UNP Q9ELS8 ? ? 'expression tag' -2 34 3 3EYD MET C 10 ? UNP Q9ELS8 ? ? 'expression tag' -1 35 3 3EYD GLY C 11 ? UNP Q9ELS8 ? ? 'expression tag' 0 36 3 3EYD ARG C 130 ? UNP Q9ELS8 GLN 1145 conflict 119 37 3 3EYD GLY C 193 ? UNP Q9ELS8 ? ? 'expression tag' 182 38 3 3EYD SER C 194 ? UNP Q9ELS8 ? ? 'expression tag' 183 39 3 3EYD HIS C 195 ? UNP Q9ELS8 ? ? 'expression tag' 184 40 3 3EYD HIS C 196 ? UNP Q9ELS8 ? ? 'expression tag' 185 41 3 3EYD HIS C 197 ? UNP Q9ELS8 ? ? 'expression tag' 186 42 3 3EYD HIS C 198 ? UNP Q9ELS8 ? ? 'expression tag' 187 43 3 3EYD HIS C 199 ? UNP Q9ELS8 ? ? 'expression tag' 188 44 3 3EYD HIS C 200 ? UNP Q9ELS8 ? ? 'expression tag' 189 45 4 3EYD LYS D 1 ? UNP Q9ELS8 ? ? 'expression tag' 19 46 4 3EYD LYS D 2 ? UNP Q9ELS8 ? ? 'expression tag' 20 47 4 3EYD SER D 4 ? UNP Q9ELS8 CYS 1679 'engineered mutation' 22 48 4 3EYD LYS D 22 ? UNP Q9ELS8 ? ? 'expression tag' 40 49 4 3EYD LYS D 23 ? UNP Q9ELS8 ? ? 'expression tag' 41 50 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2680 ? 1 MORE -51 ? 1 'SSA (A^2)' 10090 ? 2 'ABSA (A^2)' 1690 ? 2 MORE -47 ? 2 'SSA (A^2)' 7780 ? 3 'ABSA (A^2)' 6670 ? 3 MORE -121 ? 3 'SSA (A^2)' 15580 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,H,I 2 1 C,D,G,J,K 3 1 A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details 1 ;The asymmetric unit contains a dimer of the NS3-NS4a complex. This is only the protease domain of NS3 and a peptide of NS4a. This dimeric structure is the result of the soultion structure of the domain. The full length NS3 contains a 3-domain helicase as well and would not have the same dimeric interfaces. ; 2 ? 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 23 ? GLY A 34 ? GLY A 12 GLY A 23 1 ? 12 HELX_P HELX_P2 2 TYR A 67 ? GLY A 71 ? TYR A 56 GLY A 60 1 ? 5 HELX_P HELX_P3 3 ILE A 143 ? LYS A 147 ? ILE A 132 LYS A 136 1 ? 5 HELX_P HELX_P4 4 VAL A 183 ? ARG A 191 ? VAL A 172 ARG A 180 1 ? 9 HELX_P HELX_P5 5 TYR C 67 ? GLY C 71 ? TYR C 56 GLY C 60 1 ? 5 HELX_P HELX_P6 6 ILE C 143 ? LYS C 147 ? ILE C 132 LYS C 136 1 ? 5 HELX_P HELX_P7 7 VAL C 183 ? MET C 190 ? VAL C 172 MET C 179 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A SER 150 OG ? ? ? 1_555 F BE8 . B36 ? ? A SER 139 A BE8 401 1_555 ? ? ? ? ? ? ? 1.453 ? ? metalc1 metalc ? ? A CYS 108 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 97 A ZN 901 1_555 ? ? ? ? ? ? ? 2.131 ? ? metalc2 metalc ? ? A CYS 110 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 99 A ZN 901 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc3 metalc ? ? A CYS 156 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 145 A ZN 901 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc4 metalc ? ? C CYS 108 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 97 C ZN 901 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc5 metalc ? ? C CYS 156 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 145 C ZN 901 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc6 metalc ? ? J HOH . O ? ? ? 1_555 G ZN . ZN ? ? C HOH 190 C ZN 901 1_555 ? ? ? ? ? ? ? 2.350 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 108 ? A CYS 97 ? 1_555 ZN ? E ZN . ? A ZN 901 ? 1_555 SG ? A CYS 110 ? A CYS 99 ? 1_555 103.8 ? 2 SG ? A CYS 108 ? A CYS 97 ? 1_555 ZN ? E ZN . ? A ZN 901 ? 1_555 SG ? A CYS 156 ? A CYS 145 ? 1_555 101.3 ? 3 SG ? A CYS 110 ? A CYS 99 ? 1_555 ZN ? E ZN . ? A ZN 901 ? 1_555 SG ? A CYS 156 ? A CYS 145 ? 1_555 116.2 ? 4 SG ? C CYS 108 ? C CYS 97 ? 1_555 ZN ? G ZN . ? C ZN 901 ? 1_555 SG ? C CYS 156 ? C CYS 145 ? 1_555 91.1 ? 5 SG ? C CYS 108 ? C CYS 97 ? 1_555 ZN ? G ZN . ? C ZN 901 ? 1_555 O ? J HOH . ? C HOH 190 ? 1_555 114.0 ? 6 SG ? C CYS 156 ? C CYS 145 ? 1_555 ZN ? G ZN . ? C ZN 901 ? 1_555 O ? J HOH . ? C HOH 190 ? 1_555 122.2 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id BE8 _pdbx_modification_feature.label_asym_id F _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id SER _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 150 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id BE8 _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 401 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id SER _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 139 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom B36 _pdbx_modification_feature.modified_residue_id_linking_atom OG _pdbx_modification_feature.modified_residue_id SER _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id BE8 _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Covalent chemical modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 7 ? D ? 3 ? E ? 7 ? F ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel E 6 7 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel F 5 6 ? anti-parallel F 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 17 ? GLN A 20 ? TYR A 6 GLN A 9 A 2 VAL B 6 ? VAL B 12 ? VAL B 24 VAL B 30 A 3 VAL A 44 ? SER A 48 ? VAL A 33 SER A 37 A 4 THR A 53 ? ILE A 59 ? THR A 42 ILE A 48 A 5 VAL A 62 ? VAL A 66 ? VAL A 51 VAL A 55 A 6 LEU A 93 ? PRO A 97 ? LEU A 82 PRO A 86 A 7 TYR A 86 ? ASN A 88 ? TYR A 75 ASN A 77 B 1 ILE A 75 ? SER A 77 ? ILE A 64 SER A 66 B 2 GLY A 80 ? VAL A 82 ? GLY A 69 VAL A 71 C 1 ASP A 114 ? VAL A 118 ? ASP A 103 VAL A 107 C 2 VAL A 124 ? ARG A 129 ? VAL A 113 ARG A 118 C 3 ARG A 134 ? PRO A 142 ? ARG A 123 PRO A 131 C 4 VAL A 174 ? PRO A 182 ? VAL A 163 PRO A 171 C 5 ALA A 161 ? THR A 171 ? ALA A 150 THR A 160 C 6 PRO A 153 ? LEU A 155 ? PRO A 142 LEU A 144 C 7 ASP A 114 ? VAL A 118 ? ASP A 103 VAL A 107 D 1 ALA B 18 ? ILE B 19 ? ALA B 36 ILE B 37 D 2 SER D 4 ? VAL D 12 ? SER D 22 VAL D 30 D 3 THR C 74 ? ILE C 75 ? THR C 63 ILE C 64 E 1 ALA B 18 ? ILE B 19 ? ALA B 36 ILE B 37 E 2 SER D 4 ? VAL D 12 ? SER D 22 VAL D 30 E 3 VAL C 44 ? SER C 48 ? VAL C 33 SER C 37 E 4 THR C 53 ? ILE C 59 ? THR C 42 ILE C 48 E 5 VAL C 62 ? VAL C 66 ? VAL C 51 VAL C 55 E 6 LEU C 93 ? PRO C 97 ? LEU C 82 PRO C 86 E 7 TYR C 86 ? ASN C 88 ? TYR C 75 ASN C 77 F 1 ASP C 114 ? VAL C 118 ? ASP C 103 VAL C 107 F 2 VAL C 124 ? GLY C 131 ? VAL C 113 GLY C 120 F 3 ARG C 134 ? PRO C 142 ? ARG C 123 PRO C 131 F 4 VAL C 174 ? PRO C 182 ? VAL C 163 PRO C 171 F 5 ALA C 161 ? THR C 171 ? ALA C 150 THR C 160 F 6 PRO C 153 ? LEU C 155 ? PRO C 142 LEU C 144 F 7 ASP C 114 ? VAL C 118 ? ASP C 103 VAL C 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 17 ? N TYR A 6 O VAL B 12 ? O VAL B 30 A 2 3 O GLY B 9 ? O GLY B 27 N ILE A 46 ? N ILE A 35 A 3 4 N VAL A 47 ? N VAL A 36 O PHE A 54 ? O PHE A 43 A 4 5 N THR A 57 ? N THR A 46 O TRP A 64 ? O TRP A 53 A 5 6 N CYS A 63 ? N CYS A 52 O TRP A 96 ? O TRP A 85 A 6 7 O LEU A 93 ? O LEU A 82 N ASN A 88 ? N ASN A 77 B 1 2 N ILE A 75 ? N ILE A 64 O VAL A 82 ? O VAL A 71 C 1 2 N LEU A 115 ? N LEU A 104 O VAL A 127 ? O VAL A 116 C 2 3 N ARG A 128 ? N ARG A 117 O SER A 136 ? O SER A 125 C 3 4 N ARG A 141 ? N ARG A 130 O ALA A 175 ? O ALA A 164 C 4 5 O ASP A 179 ? O ASP A 168 N ALA A 167 ? N ALA A 156 C 5 6 O VAL A 162 ? O VAL A 151 N LEU A 154 ? N LEU A 143 C 6 7 O LEU A 155 ? O LEU A 144 N TYR A 116 ? N TYR A 105 D 1 2 N ALA B 18 ? N ALA B 36 O VAL D 12 ? O VAL D 30 D 2 3 O VAL D 5 ? O VAL D 23 N THR C 74 ? N THR C 63 E 1 2 N ALA B 18 ? N ALA B 36 O VAL D 12 ? O VAL D 30 E 2 3 O VAL D 8 ? O VAL D 26 N ILE C 46 ? N ILE C 35 E 3 4 N GLN C 45 ? N GLN C 34 O ALA C 56 ? O ALA C 45 E 4 5 N THR C 57 ? N THR C 46 O TRP C 64 ? O TRP C 53 E 5 6 N CYS C 63 ? N CYS C 52 O TRP C 96 ? O TRP C 85 E 6 7 O LEU C 93 ? O LEU C 82 N ASN C 88 ? N ASN C 77 F 1 2 N LEU C 115 ? N LEU C 104 O VAL C 127 ? O VAL C 116 F 2 3 N ARG C 130 ? N ARG C 119 O ARG C 134 ? O ARG C 123 F 3 4 N ARG C 141 ? N ARG C 130 O ALA C 175 ? O ALA C 164 F 4 5 O ALA C 177 ? O ALA C 166 N VAL C 169 ? N VAL C 158 F 5 6 O VAL C 162 ? O VAL C 151 N LEU C 154 ? N LEU C 143 F 6 7 O LEU C 155 ? O LEU C 144 N TYR C 116 ? N TYR C 105 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 901 ? 4 'BINDING SITE FOR RESIDUE ZN A 901' AC2 Software A BE8 401 ? 13 'BINDING SITE FOR RESIDUE BE8 A 401' AC3 Software C ZN 901 ? 4 'BINDING SITE FOR RESIDUE ZN C 901' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 108 ? CYS A 97 . ? 1_555 ? 2 AC1 4 CYS A 110 ? CYS A 99 . ? 1_555 ? 3 AC1 4 CYS A 156 ? CYS A 145 . ? 1_555 ? 4 AC1 4 HOH H . ? HOH A 197 . ? 1_555 ? 5 AC2 13 HIS A 68 ? HIS A 57 . ? 1_555 ? 6 AC2 13 ARG A 134 ? ARG A 123 . ? 1_555 ? 7 AC2 13 ILE A 143 ? ILE A 132 . ? 1_555 ? 8 AC2 13 GLY A 148 ? GLY A 137 . ? 1_555 ? 9 AC2 13 SER A 149 ? SER A 138 . ? 1_555 ? 10 AC2 13 SER A 150 ? SER A 139 . ? 1_555 ? 11 AC2 13 PHE A 165 ? PHE A 154 . ? 1_555 ? 12 AC2 13 ARG A 166 ? ARG A 155 . ? 1_555 ? 13 AC2 13 ALA A 167 ? ALA A 156 . ? 1_555 ? 14 AC2 13 ALA A 168 ? ALA A 157 . ? 1_555 ? 15 AC2 13 VAL A 169 ? VAL A 158 . ? 1_555 ? 16 AC2 13 CYS A 170 ? CYS A 159 . ? 1_555 ? 17 AC2 13 HOH H . ? HOH A 238 . ? 1_555 ? 18 AC3 4 CYS C 108 ? CYS C 97 . ? 1_555 ? 19 AC3 4 CYS C 110 ? CYS C 99 . ? 1_555 ? 20 AC3 4 CYS C 156 ? CYS C 145 . ? 1_555 ? 21 AC3 4 HOH J . ? HOH C 190 . ? 1_555 ? # _pdbx_entry_details.entry_id 3EYD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ZN A ZN 901 ? ? O A HOH 197 ? ? 1.65 2 1 OG A SER 139 ? ? O43 A BE8 401 ? ? 1.88 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 119 ? ? -109.99 -72.06 2 1 PRO B 35 ? ? -39.34 128.59 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -10 ? A MET 1 2 1 Y 1 A ALA -9 ? A ALA 2 3 1 Y 1 A SER -8 ? A SER 3 4 1 Y 1 A MET -7 ? A MET 4 5 1 Y 1 A THR -6 ? A THR 5 6 1 Y 1 A GLY -5 ? A GLY 6 7 1 Y 1 A GLY -4 ? A GLY 7 8 1 Y 1 A GLN -3 ? A GLN 8 9 1 Y 1 A GLN -2 ? A GLN 9 10 1 Y 1 A MET -1 ? A MET 10 11 1 Y 1 A GLY 0 ? A GLY 11 12 1 Y 1 A GLY 182 ? A GLY 193 13 1 Y 1 A SER 183 ? A SER 194 14 1 Y 1 A HIS 184 ? A HIS 195 15 1 Y 1 A HIS 185 ? A HIS 196 16 1 Y 1 A HIS 186 ? A HIS 197 17 1 Y 1 A HIS 187 ? A HIS 198 18 1 Y 1 A HIS 188 ? A HIS 199 19 1 Y 1 A HIS 189 ? A HIS 200 20 1 Y 1 B LYS 19 ? B LYS 1 21 1 Y 1 C MET -10 ? C MET 1 22 1 Y 1 C ALA -9 ? C ALA 2 23 1 Y 1 C SER -8 ? C SER 3 24 1 Y 1 C MET -7 ? C MET 4 25 1 Y 1 C THR -6 ? C THR 5 26 1 Y 1 C GLY -5 ? C GLY 6 27 1 Y 1 C GLY -4 ? C GLY 7 28 1 Y 1 C GLN -3 ? C GLN 8 29 1 Y 1 C GLN -2 ? C GLN 9 30 1 Y 1 C MET -1 ? C MET 10 31 1 Y 1 C GLY 0 ? C GLY 11 32 1 Y 1 C ALA 1 ? C ALA 12 33 1 Y 1 C PRO 2 ? C PRO 13 34 1 Y 1 C ILE 3 ? C ILE 14 35 1 Y 1 C THR 4 ? C THR 15 36 1 Y 1 C ALA 5 ? C ALA 16 37 1 Y 1 C TYR 6 ? C TYR 17 38 1 Y 1 C ALA 7 ? C ALA 18 39 1 Y 1 C GLN 8 ? C GLN 19 40 1 Y 1 C GLN 9 ? C GLN 20 41 1 Y 1 C THR 10 ? C THR 21 42 1 Y 1 C ARG 11 ? C ARG 22 43 1 Y 1 C GLY 12 ? C GLY 23 44 1 Y 1 C LEU 13 ? C LEU 24 45 1 Y 1 C LEU 14 ? C LEU 25 46 1 Y 1 C GLY 15 ? C GLY 26 47 1 Y 1 C CYS 16 ? C CYS 27 48 1 Y 1 C ILE 17 ? C ILE 28 49 1 Y 1 C ILE 18 ? C ILE 29 50 1 Y 1 C THR 19 ? C THR 30 51 1 Y 1 C SER 20 ? C SER 31 52 1 Y 1 C LEU 21 ? C LEU 32 53 1 Y 1 C THR 22 ? C THR 33 54 1 Y 1 C GLY 23 ? C GLY 34 55 1 Y 1 C ARG 24 ? C ARG 35 56 1 Y 1 C ASP 25 ? C ASP 36 57 1 Y 1 C LYS 26 ? C LYS 37 58 1 Y 1 C ASN 27 ? C ASN 38 59 1 Y 1 C GLN 28 ? C GLN 39 60 1 Y 1 C ARG 180 ? C ARG 191 61 1 Y 1 C SER 181 ? C SER 192 62 1 Y 1 C GLY 182 ? C GLY 193 63 1 Y 1 C SER 183 ? C SER 194 64 1 Y 1 C HIS 184 ? C HIS 195 65 1 Y 1 C HIS 185 ? C HIS 196 66 1 Y 1 C HIS 186 ? C HIS 197 67 1 Y 1 C HIS 187 ? C HIS 198 68 1 Y 1 C HIS 188 ? C HIS 199 69 1 Y 1 C HIS 189 ? C HIS 200 70 1 Y 1 D LYS 19 ? D LYS 1 71 1 Y 1 D LYS 20 ? D LYS 2 72 1 Y 1 D ILE 37 ? D ILE 19 73 1 Y 1 D ILE 38 ? D ILE 20 74 1 Y 1 D PRO 39 ? D PRO 21 75 1 Y 1 D LYS 40 ? D LYS 22 76 1 Y 1 D LYS 41 ? D LYS 23 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BE8 C1 C N N 74 BE8 C6 C N N 75 BE8 C7 C N N 76 BE8 C8 C N N 77 BE8 C9 C N N 78 BE8 C11 C N N 79 BE8 O2 O N N 80 BE8 C4 C N S 81 BE8 C15 C N N 82 BE8 C5 C N N 83 BE8 N3 N N N 84 BE8 N10 N N N 85 BE8 S12 S N N 86 BE8 O13 O N N 87 BE8 O14 O N N 88 BE8 N16 N N N 89 BE8 C17 C N S 90 BE8 C18 C N N 91 BE8 C19 C N N 92 BE8 C20 C N N 93 BE8 C21 C N N 94 BE8 C22 C N N 95 BE8 O23 O N N 96 BE8 N24 N N N 97 BE8 C25 C N N 98 BE8 C26 C N S 99 BE8 C27 C N R 100 BE8 C28 C N S 101 BE8 C29 C N N 102 BE8 C30 C N N 103 BE8 C31 C N N 104 BE8 C32 C N N 105 BE8 O33 O N N 106 BE8 N34 N N N 107 BE8 C35 C N R 108 BE8 B36 B N N 109 BE8 C37 C N N 110 BE8 C38 C N N 111 BE8 C39 C N N 112 BE8 C40 C N N 113 BE8 C41 C N N 114 BE8 O42 O N N 115 BE8 O43 O N N 116 BE8 H7 H N N 117 BE8 H7A H N N 118 BE8 H7B H N N 119 BE8 H8 H N N 120 BE8 H8A H N N 121 BE8 H8B H N N 122 BE8 H9 H N N 123 BE8 H9A H N N 124 BE8 H9B H N N 125 BE8 H11 H N N 126 BE8 H11A H N N 127 BE8 H11B H N N 128 BE8 H4 H N N 129 BE8 H15 H N N 130 BE8 H15A H N N 131 BE8 H15B H N N 132 BE8 H5 H N N 133 BE8 H5A H N N 134 BE8 HN3 H N N 135 BE8 HN16 H N N 136 BE8 H17 H N N 137 BE8 H19 H N N 138 BE8 H19A H N N 139 BE8 H19B H N N 140 BE8 H20 H N N 141 BE8 H20A H N N 142 BE8 H20B H N N 143 BE8 H21 H N N 144 BE8 H21A H N N 145 BE8 H21B H N N 146 BE8 H25 H N N 147 BE8 H25A H N N 148 BE8 H26 H N N 149 BE8 H27 H N N 150 BE8 H28 H N N 151 BE8 H30 H N N 152 BE8 H30A H N N 153 BE8 H30B H N N 154 BE8 H31 H N N 155 BE8 H31A H N N 156 BE8 H31B H N N 157 BE8 HN34 H N N 158 BE8 H35 H N N 159 BE8 H37 H N N 160 BE8 H37A H N N 161 BE8 H38 H N N 162 BE8 H39 H N N 163 BE8 H39A H N N 164 BE8 H40 H N N 165 BE8 H40A H N N 166 BE8 H41 H N N 167 BE8 H41A H N N 168 BE8 HO42 H N N 169 BE8 HO43 H N N 170 CYS N N N N 171 CYS CA C N R 172 CYS C C N N 173 CYS O O N N 174 CYS CB C N N 175 CYS SG S N N 176 CYS OXT O N N 177 CYS H H N N 178 CYS H2 H N N 179 CYS HA H N N 180 CYS HB2 H N N 181 CYS HB3 H N N 182 CYS HG H N N 183 CYS HXT H N N 184 GLN N N N N 185 GLN CA C N S 186 GLN C C N N 187 GLN O O N N 188 GLN CB C N N 189 GLN CG C N N 190 GLN CD C N N 191 GLN OE1 O N N 192 GLN NE2 N N N 193 GLN OXT O N N 194 GLN H H N N 195 GLN H2 H N N 196 GLN HA H N N 197 GLN HB2 H N N 198 GLN HB3 H N N 199 GLN HG2 H N N 200 GLN HG3 H N N 201 GLN HE21 H N N 202 GLN HE22 H N N 203 GLN HXT H N N 204 GLU N N N N 205 GLU CA C N S 206 GLU C C N N 207 GLU O O N N 208 GLU CB C N N 209 GLU CG C N N 210 GLU CD C N N 211 GLU OE1 O N N 212 GLU OE2 O N N 213 GLU OXT O N N 214 GLU H H N N 215 GLU H2 H N N 216 GLU HA H N N 217 GLU HB2 H N N 218 GLU HB3 H N N 219 GLU HG2 H N N 220 GLU HG3 H N N 221 GLU HE2 H N N 222 GLU HXT H N N 223 GLY N N N N 224 GLY CA C N N 225 GLY C C N N 226 GLY O O N N 227 GLY OXT O N N 228 GLY H H N N 229 GLY H2 H N N 230 GLY HA2 H N N 231 GLY HA3 H N N 232 GLY HXT H N N 233 HIS N N N N 234 HIS CA C N S 235 HIS C C N N 236 HIS O O N N 237 HIS CB C N N 238 HIS CG C Y N 239 HIS ND1 N Y N 240 HIS CD2 C Y N 241 HIS CE1 C Y N 242 HIS NE2 N Y N 243 HIS OXT O N N 244 HIS H H N N 245 HIS H2 H N N 246 HIS HA H N N 247 HIS HB2 H N N 248 HIS HB3 H N N 249 HIS HD1 H N N 250 HIS HD2 H N N 251 HIS HE1 H N N 252 HIS HE2 H N N 253 HIS HXT H N N 254 HOH O O N N 255 HOH H1 H N N 256 HOH H2 H N N 257 ILE N N N N 258 ILE CA C N S 259 ILE C C N N 260 ILE O O N N 261 ILE CB C N S 262 ILE CG1 C N N 263 ILE CG2 C N N 264 ILE CD1 C N N 265 ILE OXT O N N 266 ILE H H N N 267 ILE H2 H N N 268 ILE HA H N N 269 ILE HB H N N 270 ILE HG12 H N N 271 ILE HG13 H N N 272 ILE HG21 H N N 273 ILE HG22 H N N 274 ILE HG23 H N N 275 ILE HD11 H N N 276 ILE HD12 H N N 277 ILE HD13 H N N 278 ILE HXT H N N 279 LEU N N N N 280 LEU CA C N S 281 LEU C C N N 282 LEU O O N N 283 LEU CB C N N 284 LEU CG C N N 285 LEU CD1 C N N 286 LEU CD2 C N N 287 LEU OXT O N N 288 LEU H H N N 289 LEU H2 H N N 290 LEU HA H N N 291 LEU HB2 H N N 292 LEU HB3 H N N 293 LEU HG H N N 294 LEU HD11 H N N 295 LEU HD12 H N N 296 LEU HD13 H N N 297 LEU HD21 H N N 298 LEU HD22 H N N 299 LEU HD23 H N N 300 LEU HXT H N N 301 LYS N N N N 302 LYS CA C N S 303 LYS C C N N 304 LYS O O N N 305 LYS CB C N N 306 LYS CG C N N 307 LYS CD C N N 308 LYS CE C N N 309 LYS NZ N N N 310 LYS OXT O N N 311 LYS H H N N 312 LYS H2 H N N 313 LYS HA H N N 314 LYS HB2 H N N 315 LYS HB3 H N N 316 LYS HG2 H N N 317 LYS HG3 H N N 318 LYS HD2 H N N 319 LYS HD3 H N N 320 LYS HE2 H N N 321 LYS HE3 H N N 322 LYS HZ1 H N N 323 LYS HZ2 H N N 324 LYS HZ3 H N N 325 LYS HXT H N N 326 MET N N N N 327 MET CA C N S 328 MET C C N N 329 MET O O N N 330 MET CB C N N 331 MET CG C N N 332 MET SD S N N 333 MET CE C N N 334 MET OXT O N N 335 MET H H N N 336 MET H2 H N N 337 MET HA H N N 338 MET HB2 H N N 339 MET HB3 H N N 340 MET HG2 H N N 341 MET HG3 H N N 342 MET HE1 H N N 343 MET HE2 H N N 344 MET HE3 H N N 345 MET HXT H N N 346 PHE N N N N 347 PHE CA C N S 348 PHE C C N N 349 PHE O O N N 350 PHE CB C N N 351 PHE CG C Y N 352 PHE CD1 C Y N 353 PHE CD2 C Y N 354 PHE CE1 C Y N 355 PHE CE2 C Y N 356 PHE CZ C Y N 357 PHE OXT O N N 358 PHE H H N N 359 PHE H2 H N N 360 PHE HA H N N 361 PHE HB2 H N N 362 PHE HB3 H N N 363 PHE HD1 H N N 364 PHE HD2 H N N 365 PHE HE1 H N N 366 PHE HE2 H N N 367 PHE HZ H N N 368 PHE HXT H N N 369 PRO N N N N 370 PRO CA C N S 371 PRO C C N N 372 PRO O O N N 373 PRO CB C N N 374 PRO CG C N N 375 PRO CD C N N 376 PRO OXT O N N 377 PRO H H N N 378 PRO HA H N N 379 PRO HB2 H N N 380 PRO HB3 H N N 381 PRO HG2 H N N 382 PRO HG3 H N N 383 PRO HD2 H N N 384 PRO HD3 H N N 385 PRO HXT H N N 386 SER N N N N 387 SER CA C N S 388 SER C C N N 389 SER O O N N 390 SER CB C N N 391 SER OG O N N 392 SER OXT O N N 393 SER H H N N 394 SER H2 H N N 395 SER HA H N N 396 SER HB2 H N N 397 SER HB3 H N N 398 SER HG H N N 399 SER HXT H N N 400 THR N N N N 401 THR CA C N S 402 THR C C N N 403 THR O O N N 404 THR CB C N R 405 THR OG1 O N N 406 THR CG2 C N N 407 THR OXT O N N 408 THR H H N N 409 THR H2 H N N 410 THR HA H N N 411 THR HB H N N 412 THR HG1 H N N 413 THR HG21 H N N 414 THR HG22 H N N 415 THR HG23 H N N 416 THR HXT H N N 417 TRP N N N N 418 TRP CA C N S 419 TRP C C N N 420 TRP O O N N 421 TRP CB C N N 422 TRP CG C Y N 423 TRP CD1 C Y N 424 TRP CD2 C Y N 425 TRP NE1 N Y N 426 TRP CE2 C Y N 427 TRP CE3 C Y N 428 TRP CZ2 C Y N 429 TRP CZ3 C Y N 430 TRP CH2 C Y N 431 TRP OXT O N N 432 TRP H H N N 433 TRP H2 H N N 434 TRP HA H N N 435 TRP HB2 H N N 436 TRP HB3 H N N 437 TRP HD1 H N N 438 TRP HE1 H N N 439 TRP HE3 H N N 440 TRP HZ2 H N N 441 TRP HZ3 H N N 442 TRP HH2 H N N 443 TRP HXT H N N 444 TYR N N N N 445 TYR CA C N S 446 TYR C C N N 447 TYR O O N N 448 TYR CB C N N 449 TYR CG C Y N 450 TYR CD1 C Y N 451 TYR CD2 C Y N 452 TYR CE1 C Y N 453 TYR CE2 C Y N 454 TYR CZ C Y N 455 TYR OH O N N 456 TYR OXT O N N 457 TYR H H N N 458 TYR H2 H N N 459 TYR HA H N N 460 TYR HB2 H N N 461 TYR HB3 H N N 462 TYR HD1 H N N 463 TYR HD2 H N N 464 TYR HE1 H N N 465 TYR HE2 H N N 466 TYR HH H N N 467 TYR HXT H N N 468 VAL N N N N 469 VAL CA C N S 470 VAL C C N N 471 VAL O O N N 472 VAL CB C N N 473 VAL CG1 C N N 474 VAL CG2 C N N 475 VAL OXT O N N 476 VAL H H N N 477 VAL H2 H N N 478 VAL HA H N N 479 VAL HB H N N 480 VAL HG11 H N N 481 VAL HG12 H N N 482 VAL HG13 H N N 483 VAL HG21 H N N 484 VAL HG22 H N N 485 VAL HG23 H N N 486 VAL HXT H N N 487 ZN ZN ZN N N 488 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BE8 N16 C1 sing N N 70 BE8 C1 N3 sing N N 71 BE8 C1 O2 doub N N 72 BE8 C4 C6 sing N N 73 BE8 C6 C8 sing N N 74 BE8 C6 C7 sing N N 75 BE8 C6 C9 sing N N 76 BE8 C7 H7 sing N N 77 BE8 C7 H7A sing N N 78 BE8 C7 H7B sing N N 79 BE8 C8 H8 sing N N 80 BE8 C8 H8A sing N N 81 BE8 C8 H8B sing N N 82 BE8 C9 H9 sing N N 83 BE8 C9 H9A sing N N 84 BE8 C9 H9B sing N N 85 BE8 C11 N10 sing N N 86 BE8 C11 H11 sing N N 87 BE8 C11 H11A sing N N 88 BE8 C11 H11B sing N N 89 BE8 C5 C4 sing N N 90 BE8 N3 C4 sing N N 91 BE8 C4 H4 sing N N 92 BE8 C15 S12 sing N N 93 BE8 C15 H15 sing N N 94 BE8 C15 H15A sing N N 95 BE8 C15 H15B sing N N 96 BE8 N10 C5 sing N N 97 BE8 C5 H5 sing N N 98 BE8 C5 H5A sing N N 99 BE8 N3 HN3 sing N N 100 BE8 S12 N10 sing N N 101 BE8 O14 S12 doub N N 102 BE8 S12 O13 doub N N 103 BE8 C17 N16 sing N N 104 BE8 N16 HN16 sing N N 105 BE8 C18 C17 sing N N 106 BE8 C17 C22 sing N N 107 BE8 C17 H17 sing N N 108 BE8 C20 C18 sing N N 109 BE8 C21 C18 sing N N 110 BE8 C18 C19 sing N N 111 BE8 C19 H19 sing N N 112 BE8 C19 H19A sing N N 113 BE8 C19 H19B sing N N 114 BE8 C20 H20 sing N N 115 BE8 C20 H20A sing N N 116 BE8 C20 H20B sing N N 117 BE8 C21 H21 sing N N 118 BE8 C21 H21A sing N N 119 BE8 C21 H21B sing N N 120 BE8 C22 O23 doub N N 121 BE8 C22 N24 sing N N 122 BE8 N24 C25 sing N N 123 BE8 N24 C26 sing N N 124 BE8 C25 C28 sing N N 125 BE8 C25 H25 sing N N 126 BE8 C25 H25A sing N N 127 BE8 C32 C26 sing N N 128 BE8 C26 C27 sing N N 129 BE8 C26 H26 sing N N 130 BE8 C28 C27 sing N N 131 BE8 C27 C29 sing N N 132 BE8 C27 H27 sing N N 133 BE8 C28 C29 sing N N 134 BE8 C28 H28 sing N N 135 BE8 C31 C29 sing N N 136 BE8 C29 C30 sing N N 137 BE8 C30 H30 sing N N 138 BE8 C30 H30A sing N N 139 BE8 C30 H30B sing N N 140 BE8 C31 H31 sing N N 141 BE8 C31 H31A sing N N 142 BE8 C31 H31B sing N N 143 BE8 O33 C32 doub N N 144 BE8 C32 N34 sing N N 145 BE8 C35 N34 sing N N 146 BE8 N34 HN34 sing N N 147 BE8 C37 C35 sing N N 148 BE8 C35 B36 sing N N 149 BE8 C35 H35 sing N N 150 BE8 O42 B36 sing N N 151 BE8 B36 O43 sing N N 152 BE8 C38 C37 sing N N 153 BE8 C37 H37 sing N N 154 BE8 C37 H37A sing N N 155 BE8 C39 C38 sing N N 156 BE8 C40 C38 sing N N 157 BE8 C38 H38 sing N N 158 BE8 C41 C39 sing N N 159 BE8 C39 H39 sing N N 160 BE8 C39 H39A sing N N 161 BE8 C41 C40 sing N N 162 BE8 C40 H40 sing N N 163 BE8 C40 H40A sing N N 164 BE8 C41 H41 sing N N 165 BE8 C41 H41A sing N N 166 BE8 O42 HO42 sing N N 167 BE8 O43 HO43 sing N N 168 CYS N CA sing N N 169 CYS N H sing N N 170 CYS N H2 sing N N 171 CYS CA C sing N N 172 CYS CA CB sing N N 173 CYS CA HA sing N N 174 CYS C O doub N N 175 CYS C OXT sing N N 176 CYS CB SG sing N N 177 CYS CB HB2 sing N N 178 CYS CB HB3 sing N N 179 CYS SG HG sing N N 180 CYS OXT HXT sing N N 181 GLN N CA sing N N 182 GLN N H sing N N 183 GLN N H2 sing N N 184 GLN CA C sing N N 185 GLN CA CB sing N N 186 GLN CA HA sing N N 187 GLN C O doub N N 188 GLN C OXT sing N N 189 GLN CB CG sing N N 190 GLN CB HB2 sing N N 191 GLN CB HB3 sing N N 192 GLN CG CD sing N N 193 GLN CG HG2 sing N N 194 GLN CG HG3 sing N N 195 GLN CD OE1 doub N N 196 GLN CD NE2 sing N N 197 GLN NE2 HE21 sing N N 198 GLN NE2 HE22 sing N N 199 GLN OXT HXT sing N N 200 GLU N CA sing N N 201 GLU N H sing N N 202 GLU N H2 sing N N 203 GLU CA C sing N N 204 GLU CA CB sing N N 205 GLU CA HA sing N N 206 GLU C O doub N N 207 GLU C OXT sing N N 208 GLU CB CG sing N N 209 GLU CB HB2 sing N N 210 GLU CB HB3 sing N N 211 GLU CG CD sing N N 212 GLU CG HG2 sing N N 213 GLU CG HG3 sing N N 214 GLU CD OE1 doub N N 215 GLU CD OE2 sing N N 216 GLU OE2 HE2 sing N N 217 GLU OXT HXT sing N N 218 GLY N CA sing N N 219 GLY N H sing N N 220 GLY N H2 sing N N 221 GLY CA C sing N N 222 GLY CA HA2 sing N N 223 GLY CA HA3 sing N N 224 GLY C O doub N N 225 GLY C OXT sing N N 226 GLY OXT HXT sing N N 227 HIS N CA sing N N 228 HIS N H sing N N 229 HIS N H2 sing N N 230 HIS CA C sing N N 231 HIS CA CB sing N N 232 HIS CA HA sing N N 233 HIS C O doub N N 234 HIS C OXT sing N N 235 HIS CB CG sing N N 236 HIS CB HB2 sing N N 237 HIS CB HB3 sing N N 238 HIS CG ND1 sing Y N 239 HIS CG CD2 doub Y N 240 HIS ND1 CE1 doub Y N 241 HIS ND1 HD1 sing N N 242 HIS CD2 NE2 sing Y N 243 HIS CD2 HD2 sing N N 244 HIS CE1 NE2 sing Y N 245 HIS CE1 HE1 sing N N 246 HIS NE2 HE2 sing N N 247 HIS OXT HXT sing N N 248 HOH O H1 sing N N 249 HOH O H2 sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 LEU N CA sing N N 272 LEU N H sing N N 273 LEU N H2 sing N N 274 LEU CA C sing N N 275 LEU CA CB sing N N 276 LEU CA HA sing N N 277 LEU C O doub N N 278 LEU C OXT sing N N 279 LEU CB CG sing N N 280 LEU CB HB2 sing N N 281 LEU CB HB3 sing N N 282 LEU CG CD1 sing N N 283 LEU CG CD2 sing N N 284 LEU CG HG sing N N 285 LEU CD1 HD11 sing N N 286 LEU CD1 HD12 sing N N 287 LEU CD1 HD13 sing N N 288 LEU CD2 HD21 sing N N 289 LEU CD2 HD22 sing N N 290 LEU CD2 HD23 sing N N 291 LEU OXT HXT sing N N 292 LYS N CA sing N N 293 LYS N H sing N N 294 LYS N H2 sing N N 295 LYS CA C sing N N 296 LYS CA CB sing N N 297 LYS CA HA sing N N 298 LYS C O doub N N 299 LYS C OXT sing N N 300 LYS CB CG sing N N 301 LYS CB HB2 sing N N 302 LYS CB HB3 sing N N 303 LYS CG CD sing N N 304 LYS CG HG2 sing N N 305 LYS CG HG3 sing N N 306 LYS CD CE sing N N 307 LYS CD HD2 sing N N 308 LYS CD HD3 sing N N 309 LYS CE NZ sing N N 310 LYS CE HE2 sing N N 311 LYS CE HE3 sing N N 312 LYS NZ HZ1 sing N N 313 LYS NZ HZ2 sing N N 314 LYS NZ HZ3 sing N N 315 LYS OXT HXT sing N N 316 MET N CA sing N N 317 MET N H sing N N 318 MET N H2 sing N N 319 MET CA C sing N N 320 MET CA CB sing N N 321 MET CA HA sing N N 322 MET C O doub N N 323 MET C OXT sing N N 324 MET CB CG sing N N 325 MET CB HB2 sing N N 326 MET CB HB3 sing N N 327 MET CG SD sing N N 328 MET CG HG2 sing N N 329 MET CG HG3 sing N N 330 MET SD CE sing N N 331 MET CE HE1 sing N N 332 MET CE HE2 sing N N 333 MET CE HE3 sing N N 334 MET OXT HXT sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 SER N CA sing N N 376 SER N H sing N N 377 SER N H2 sing N N 378 SER CA C sing N N 379 SER CA CB sing N N 380 SER CA HA sing N N 381 SER C O doub N N 382 SER C OXT sing N N 383 SER CB OG sing N N 384 SER CB HB2 sing N N 385 SER CB HB3 sing N N 386 SER OG HG sing N N 387 SER OXT HXT sing N N 388 THR N CA sing N N 389 THR N H sing N N 390 THR N H2 sing N N 391 THR CA C sing N N 392 THR CA CB sing N N 393 THR CA HA sing N N 394 THR C O doub N N 395 THR C OXT sing N N 396 THR CB OG1 sing N N 397 THR CB CG2 sing N N 398 THR CB HB sing N N 399 THR OG1 HG1 sing N N 400 THR CG2 HG21 sing N N 401 THR CG2 HG22 sing N N 402 THR CG2 HG23 sing N N 403 THR OXT HXT sing N N 404 TRP N CA sing N N 405 TRP N H sing N N 406 TRP N H2 sing N N 407 TRP CA C sing N N 408 TRP CA CB sing N N 409 TRP CA HA sing N N 410 TRP C O doub N N 411 TRP C OXT sing N N 412 TRP CB CG sing N N 413 TRP CB HB2 sing N N 414 TRP CB HB3 sing N N 415 TRP CG CD1 doub Y N 416 TRP CG CD2 sing Y N 417 TRP CD1 NE1 sing Y N 418 TRP CD1 HD1 sing N N 419 TRP CD2 CE2 doub Y N 420 TRP CD2 CE3 sing Y N 421 TRP NE1 CE2 sing Y N 422 TRP NE1 HE1 sing N N 423 TRP CE2 CZ2 sing Y N 424 TRP CE3 CZ3 doub Y N 425 TRP CE3 HE3 sing N N 426 TRP CZ2 CH2 doub Y N 427 TRP CZ2 HZ2 sing N N 428 TRP CZ3 CH2 sing Y N 429 TRP CZ3 HZ3 sing N N 430 TRP CH2 HH2 sing N N 431 TRP OXT HXT sing N N 432 TYR N CA sing N N 433 TYR N H sing N N 434 TYR N H2 sing N N 435 TYR CA C sing N N 436 TYR CA CB sing N N 437 TYR CA HA sing N N 438 TYR C O doub N N 439 TYR C OXT sing N N 440 TYR CB CG sing N N 441 TYR CB HB2 sing N N 442 TYR CB HB3 sing N N 443 TYR CG CD1 doub Y N 444 TYR CG CD2 sing Y N 445 TYR CD1 CE1 sing Y N 446 TYR CD1 HD1 sing N N 447 TYR CD2 CE2 doub Y N 448 TYR CD2 HD2 sing N N 449 TYR CE1 CZ doub Y N 450 TYR CE1 HE1 sing N N 451 TYR CE2 CZ sing Y N 452 TYR CE2 HE2 sing N N 453 TYR CZ OH sing N N 454 TYR OH HH sing N N 455 TYR OXT HXT sing N N 456 VAL N CA sing N N 457 VAL N H sing N N 458 VAL N H2 sing N N 459 VAL CA C sing N N 460 VAL CA CB sing N N 461 VAL CA HA sing N N 462 VAL C O doub N N 463 VAL C OXT sing N N 464 VAL CB CG1 sing N N 465 VAL CB CG2 sing N N 466 VAL CB HB sing N N 467 VAL CG1 HG11 sing N N 468 VAL CG1 HG12 sing N N 469 VAL CG1 HG13 sing N N 470 VAL CG2 HG21 sing N N 471 VAL CG2 HG22 sing N N 472 VAL CG2 HG23 sing N N 473 VAL OXT HXT sing N N 474 # _pdbx_initial_refinement_model.accession_code 2O8M _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'HCV NS3(1-181)S139A - NS4a pdb2o8m.ent' # _atom_sites.entry_id 3EYD _atom_sites.fract_transf_matrix[1][1] 0.004455 _atom_sites.fract_transf_matrix[1][2] 0.002572 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005144 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013195 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol B C N O S ZN # loop_