HEADER TRANSCRIPTION 31-OCT-08 3F43 TITLE CRYSTAL STRUCTURE OF A PUTATIVE ANTI-SIGMA FACTOR ANTAGONIST (TM1081) TITLE 2 FROM THERMOTOGA MARITIMA AT 1.59 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ANTI-SIGMA FACTOR ANTAGONIST TM1081; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM1081, TM_1081; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK200; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MH4A KEYWDS STAS DOMAIN, SPOIIAA-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 8 30-OCT-24 3F43 1 REMARK REVDAT 7 01-FEB-23 3F43 1 REMARK SEQADV REVDAT 6 24-JUL-19 3F43 1 REMARK LINK REVDAT 5 25-OCT-17 3F43 1 REMARK REVDAT 4 13-JUL-11 3F43 1 VERSN REVDAT 3 23-MAR-11 3F43 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3F43 1 VERSN REVDAT 1 25-NOV-08 3F43 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE ANTI-SIGMA FACTOR ANTAGONIST JRNL TITL 2 TM1081 (TM1081) FROM THERMOTOGA MARITIMA AT 1.59 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 19865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1349 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.3300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 941 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 23.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.76000 REMARK 3 B22 (A**2) : 0.76000 REMARK 3 B33 (A**2) : -1.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.082 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.187 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1053 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 723 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1417 ; 1.486 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1777 ; 1.108 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 129 ; 5.423 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 44 ;30.615 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 184 ;11.676 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;16.932 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 159 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1139 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 207 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 207 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 688 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 524 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 498 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 87 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.179 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 36 ; 0.208 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.157 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 682 ; 2.288 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 248 ; 0.480 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1026 ; 2.966 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 459 ; 4.977 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 391 ; 7.342 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4423 25.7872 7.1158 REMARK 3 T TENSOR REMARK 3 T11: -0.0615 T22: -0.0637 REMARK 3 T33: -0.0871 T12: -0.0164 REMARK 3 T13: -0.0122 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.3530 L22: 2.3557 REMARK 3 L33: 2.1388 L12: -0.3320 REMARK 3 L13: -0.9063 L23: 0.9479 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: 0.0067 S13: 0.1553 REMARK 3 S21: 0.0579 S22: -0.0207 S23: -0.0215 REMARK 3 S31: -0.0490 S32: -0.1785 S33: -0.0271 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: (1). HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. (2). A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. (3). ATOM RECORDS CONTAIN RESIDUAL B REMARK 3 FACTORS ONLY. (4). CL IONS AND PEG 400 FRAGMENTS (1PE AND PEG) REMARK 3 FROM CRYSTALLIZATION SOLUTION WERE MODELED. REMARK 4 REMARK 4 3F43 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050121. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.67 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94645,0.97967 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19931 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.590 REMARK 200 RESOLUTION RANGE LOW (A) : 29.881 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.72500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 38.0% POLYETHYLENE GLYCOL 400, 0.2M REMARK 280 MAGNESIUM CHLORIDE, 0.1M CITRIC ACID PH 5.67, NANODROP', VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.81000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 24.85000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 24.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.40500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 24.85000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 24.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.21500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 24.85000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 24.85000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.40500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 24.85000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 24.85000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 85.21500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.81000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 LYS A 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 9 OD1 OD2 REMARK 470 LYS A 42 CE NZ REMARK 470 LYS A 83 CE NZ REMARK 470 LYS A 98 CE NZ REMARK 470 ARG A 112 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 63 O HOH A 137 2.19 REMARK 500 OE2 GLU A 18 O SER A 52 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 0 47.73 -104.94 REMARK 500 HIS A 0 48.13 -104.94 REMARK 500 PHE A 35 -68.41 -120.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 118 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282948 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHH. DBREF 3F43 A 1 113 UNP Q9X0H0 Y1081_THEMA 1 113 SEQADV 3F43 MSE A -11 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 GLY A -10 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 SER A -9 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 ASP A -8 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 LYS A -7 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 ILE A -6 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 HIS A -5 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 HIS A -4 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 HIS A -3 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 HIS A -2 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 HIS A -1 UNP Q9X0H0 EXPRESSION TAG SEQADV 3F43 HIS A 0 UNP Q9X0H0 EXPRESSION TAG SEQRES 1 A 125 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 125 PHE PRO TYR LYS ILE VAL ASP ASP VAL VAL ILE LEU MSE SEQRES 3 A 125 PRO ASN LYS GLU LEU ASN ILE GLU ASN ALA HIS LEU PHE SEQRES 4 A 125 LYS LYS TRP VAL PHE ASP GLU PHE LEU ASN LYS GLY TYR SEQRES 5 A 125 ASN LYS ILE PHE LEU VAL LEU SER ASP VAL GLU SER ILE SEQRES 6 A 125 ASP SER PHE SER LEU GLY VAL ILE VAL ASN ILE LEU LYS SEQRES 7 A 125 SER ILE SER SER SER GLY GLY PHE PHE ALA LEU VAL SER SEQRES 8 A 125 PRO ASN GLU LYS VAL GLU ARG VAL LEU SER LEU THR ASN SEQRES 9 A 125 LEU ASP ARG ILE VAL LYS ILE TYR ASP THR ILE SER GLU SEQRES 10 A 125 ALA MSE GLU GLU VAL ARG ARG LYS MODRES 3F43 MSE A 1 MET SELENOMETHIONINE MODRES 3F43 MSE A 14 MET SELENOMETHIONINE MODRES 3F43 MSE A 107 MET SELENOMETHIONINE HET MSE A 1 16 HET MSE A 14 8 HET MSE A 107 16 HET CL A 114 1 HET CL A 115 1 HET CL A 116 1 HET 1PE A 117 32 HET PEG A 118 7 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN 1PE PEG400 FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 CL 3(CL 1-) FORMUL 5 1PE C10 H22 O6 FORMUL 6 PEG C4 H10 O3 FORMUL 7 HOH *121(H2 O) HELIX 1 1 ASN A 23 PHE A 35 1 13 HELIX 2 2 LEU A 36 GLY A 39 5 4 HELIX 3 3 ASP A 54 GLY A 72 1 19 HELIX 4 4 ASN A 81 THR A 91 1 11 HELIX 5 5 ASN A 92 ILE A 96 5 5 HELIX 6 6 THR A 102 ARG A 112 1 11 SHEET 1 A 5 TYR A 4 VAL A 7 0 SHEET 2 A 5 VAL A 10 LEU A 13 -1 O ILE A 12 N LYS A 5 SHEET 3 A 5 LYS A 42 VAL A 46 1 O PHE A 44 N LEU A 13 SHEET 4 A 5 PHE A 74 VAL A 78 1 O ALA A 76 N LEU A 45 SHEET 5 A 5 LYS A 98 TYR A 100 1 O LYS A 98 N LEU A 77 LINK C HIS A 0 N AMSE A 1 1555 1555 1.32 LINK C HIS A 0 N BMSE A 1 1555 1555 1.33 LINK C AMSE A 1 N PHE A 2 1555 1555 1.34 LINK C BMSE A 1 N PHE A 2 1555 1555 1.33 LINK C LEU A 13 N MSE A 14 1555 1555 1.32 LINK C MSE A 14 N PRO A 15 1555 1555 1.36 LINK C ALA A 106 N AMSE A 107 1555 1555 1.33 LINK C ALA A 106 N BMSE A 107 1555 1555 1.33 LINK C AMSE A 107 N GLU A 108 1555 1555 1.33 LINK C BMSE A 107 N GLU A 108 1555 1555 1.33 SITE 1 AC1 4 HIS A 25 LYS A 66 HOH A 140 HOH A 234 SITE 1 AC2 3 LYS A 28 HOH A 212 HOH A 217 SITE 1 AC3 7 HIS A 25 PHE A 56 LYS A 66 1PE A 117 SITE 2 AC3 7 HOH A 139 HOH A 140 HOH A 193 SITE 1 AC4 6 LYS A 5 VAL A 7 MSE A 14 ILE A 21 SITE 2 AC4 6 SER A 69 CL A 116 SITE 1 AC5 3 ARG A 95 LYS A 98 HOH A 196 CRYST1 49.700 49.700 113.620 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020121 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008801 0.00000