HEADER TRANSFERASE 10-NOV-08 3F7Z TITLE X-RAY CO-CRYSTAL STRUCTURE OF GLYCOGEN SYNTHASE KINASE 3BETA IN TITLE 2 COMPLEX WITH AN INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 35-383, PROTEIN KINASE DOMAIN; COMPND 5 SYNONYM: GSK-3 BETA; COMPND 6 EC: 2.7.11.26; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSK3B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS ENZYME, PROTEIN KINASE, INHIBITOR CO-CRYSTAL STRUCTURE, ATP-BINDING, KEYWDS 2 KINASE, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KEYWDS 3 KINASE, TRANSFERASE, WNT SIGNALING PATHWAY EXPDTA X-RAY DIFFRACTION AUTHOR C.D.MOL,D.R.DOUGAN REVDAT 6 27-NOV-24 3F7Z 1 REMARK REVDAT 5 27-DEC-23 3F7Z 1 SEQADV LINK REVDAT 4 25-OCT-17 3F7Z 1 REMARK REVDAT 3 13-JUL-11 3F7Z 1 VERSN REVDAT 2 24-MAR-09 3F7Z 1 JRNL REVDAT 1 10-MAR-09 3F7Z 0 JRNL AUTH M.SAITOH,J.KUNITOMO,E.KIMURA,Y.HAYASE,H.KOBAYASHI, JRNL AUTH 2 N.UCHIYAMA,T.KAWAMOTO,T.TANAKA,C.D.MOL,D.R.DOUGAN, JRNL AUTH 3 G.S.TEXTOR,G.P.SNELL,F.ITOH JRNL TITL DESIGN, SYNTHESIS AND STRUCTURE-ACTIVITY RELATIONSHIPS OF JRNL TITL 2 1,3,4-OXADIAZOLE DERIVATIVES AS NOVEL INHIBITORS OF GLYCOGEN JRNL TITL 3 SYNTHASE KINASE-3BETA. JRNL REF BIOORG.MED.CHEM. V. 17 2017 2009 JRNL REFN ISSN 0968-0896 JRNL PMID 19200745 JRNL DOI 10.1016/J.BMC.2009.01.019 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 37843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1890 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2637 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5416 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 232 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.00000 REMARK 3 B22 (A**2) : 2.25000 REMARK 3 B33 (A**2) : -1.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.334 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.251 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.866 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5624 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7659 ; 1.314 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 674 ; 4.607 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 861 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4256 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2712 ; 0.201 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 264 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 54 ; 0.154 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.189 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3417 ; 1.861 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5581 ; 3.005 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2207 ; 2.070 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2078 ; 2.981 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 136 REMARK 3 ORIGIN FOR THE GROUP (A): 9.3193 15.7879 22.1417 REMARK 3 T TENSOR REMARK 3 T11: 0.0707 T22: 0.1109 REMARK 3 T33: 0.2323 T12: -0.0233 REMARK 3 T13: -0.0316 T23: 0.0669 REMARK 3 L TENSOR REMARK 3 L11: 2.7437 L22: 2.7456 REMARK 3 L33: 2.2074 L12: 1.8076 REMARK 3 L13: 1.3835 L23: 0.4611 REMARK 3 S TENSOR REMARK 3 S11: -0.0712 S12: 0.1192 S13: 0.2620 REMARK 3 S21: 0.0958 S22: 0.0639 S23: -0.0635 REMARK 3 S31: -0.1064 S32: 0.0520 S33: 0.0073 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 137 A 383 REMARK 3 ORIGIN FOR THE GROUP (A): -7.3414 -5.1918 15.5525 REMARK 3 T TENSOR REMARK 3 T11: 0.1996 T22: 0.1018 REMARK 3 T33: 0.1162 T12: -0.0789 REMARK 3 T13: -0.0004 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 1.3022 L22: 1.0269 REMARK 3 L33: 2.7498 L12: 0.0101 REMARK 3 L13: 0.0506 L23: -0.6263 REMARK 3 S TENSOR REMARK 3 S11: 0.0498 S12: -0.0185 S13: -0.0331 REMARK 3 S21: -0.0783 S22: 0.0140 S23: 0.0002 REMARK 3 S31: 0.3550 S32: -0.3096 S33: -0.0638 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 136 REMARK 3 ORIGIN FOR THE GROUP (A): -24.3149 6.5940 48.9079 REMARK 3 T TENSOR REMARK 3 T11: 0.2184 T22: 0.1738 REMARK 3 T33: 0.0201 T12: -0.1382 REMARK 3 T13: -0.0308 T23: 0.0559 REMARK 3 L TENSOR REMARK 3 L11: 0.7341 L22: 4.7126 REMARK 3 L33: 4.8239 L12: -0.4296 REMARK 3 L13: 1.0510 L23: -3.1217 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: -0.1373 S13: 0.0711 REMARK 3 S21: -0.1875 S22: 0.1215 S23: 0.0317 REMARK 3 S31: 0.5526 S32: -0.1049 S33: -0.0992 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 137 B 383 REMARK 3 ORIGIN FOR THE GROUP (A): -26.7923 27.2164 31.0561 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.1035 REMARK 3 T33: 0.1876 T12: -0.0431 REMARK 3 T13: 0.0179 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 2.0167 L22: 0.8727 REMARK 3 L33: 1.6969 L12: 0.8211 REMARK 3 L13: -0.2419 L23: -0.3399 REMARK 3 S TENSOR REMARK 3 S11: 0.1477 S12: 0.0420 S13: 0.1411 REMARK 3 S21: 0.0125 S22: -0.0645 S23: 0.1214 REMARK 3 S31: -0.1353 S32: 0.0819 S33: -0.0832 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3000 A 3000 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4944 12.7660 17.8515 REMARK 3 T TENSOR REMARK 3 T11: 0.0957 T22: 0.2304 REMARK 3 T33: 0.3407 T12: -0.0792 REMARK 3 T13: -0.1147 T23: 0.1412 REMARK 3 L TENSOR REMARK 3 L11: -4.7579 L22: -8.5539 REMARK 3 L33: -1.7534 L12: -19.7011 REMARK 3 L13: 54.0337 L23: 0.7964 REMARK 3 S TENSOR REMARK 3 S11: -0.6515 S12: -0.6608 S13: 1.2419 REMARK 3 S21: 0.8848 S22: 1.6726 S23: 0.4174 REMARK 3 S31: 0.2788 S32: -0.2051 S33: -1.0211 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3000 B 3000 REMARK 3 ORIGIN FOR THE GROUP (A): -26.1533 9.3091 38.3287 REMARK 3 T TENSOR REMARK 3 T11: 0.4697 T22: 0.2042 REMARK 3 T33: 0.1026 T12: -0.0477 REMARK 3 T13: -0.1360 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: -8.3222 L22: 2.8498 REMARK 3 L33: 14.2571 L12: -17.9370 REMARK 3 L13: 16.3782 L23: 39.1007 REMARK 3 S TENSOR REMARK 3 S11: -0.4347 S12: 0.4299 S13: 1.5441 REMARK 3 S21: -0.6651 S22: 1.6814 S23: -0.8548 REMARK 3 S31: 0.6621 S32: -0.3018 S33: -1.2467 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3F7Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37996 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.4330 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.51100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 105 PEG 3350, 0.2M PROLINE, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 58.61500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 122 REMARK 465 LYS A 123 REMARK 465 ASP A 124 REMARK 465 TYR A 288 REMARK 465 THR A 289 REMARK 465 GLU A 290 REMARK 465 PHE A 291 REMARK 465 LYS A 292 REMARK 465 PHE A 293 REMARK 465 PRO A 294 REMARK 465 GLY B 120 REMARK 465 GLU B 121 REMARK 465 LYS B 122 REMARK 465 LYS B 123 REMARK 465 ASP B 124 REMARK 465 GLU B 125 REMARK 465 GLU B 290 REMARK 465 PHE B 291 REMARK 465 LYS B 292 REMARK 465 PHE B 293 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 90 CB CG OD1 OD2 REMARK 470 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 90 CB CG OD1 OD2 REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 544 O HOH B 545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 77 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 181 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 91 -32.52 56.85 REMARK 500 ASP A 181 45.93 -151.93 REMARK 500 ASP A 200 81.68 69.02 REMARK 500 CYS A 218 157.17 69.89 REMARK 500 ALA A 298 108.02 -54.71 REMARK 500 LEU A 321 58.64 -91.52 REMARK 500 ASN A 370 69.88 -157.89 REMARK 500 ASP B 49 79.71 -68.33 REMARK 500 LYS B 91 23.20 44.33 REMARK 500 PHE B 93 -177.52 -176.74 REMARK 500 ASP B 181 37.54 -154.25 REMARK 500 ASP B 200 84.90 57.90 REMARK 500 CYS B 218 153.11 68.48 REMARK 500 ASN B 285 105.37 -166.64 REMARK 500 ASN B 370 71.20 -171.37 REMARK 500 ALA B 374 -34.94 -37.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 34O A3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 34O B3000 DBREF 3F7Z A 35 383 UNP P49841 GSK3B_HUMAN 35 383 DBREF 3F7Z B 35 383 UNP P49841 GSK3B_HUMAN 35 383 SEQADV 3F7Z LEU A 34 UNP P49841 EXPRESSION TAG SEQADV 3F7Z LEU B 34 UNP P49841 EXPRESSION TAG SEQRES 1 A 350 LEU SER LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN SEQRES 2 A 350 GLY PRO ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR SEQRES 3 A 350 LYS VAL ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN SEQRES 4 A 350 ALA LYS LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS SEQRES 5 A 350 LYS VAL LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU SEQRES 6 A 350 GLN ILE MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG SEQRES 7 A 350 LEU ARG TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP SEQRES 8 A 350 GLU VAL TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU SEQRES 9 A 350 THR VAL TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS SEQRES 10 A 350 GLN THR LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR SEQRES 11 A 350 GLN LEU PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY SEQRES 12 A 350 ILE CYS HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU SEQRES 13 A 350 ASP PRO ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SEQRES 14 A 350 SER ALA LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER SEQRES 15 A 350 PTR ILE CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE SEQRES 16 A 350 PHE GLY ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SEQRES 17 A 350 SER ALA GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN SEQRES 18 A 350 PRO ILE PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL SEQRES 19 A 350 GLU ILE ILE LYS VAL LEU GLY THR PRO THR ARG GLU GLN SEQRES 20 A 350 ILE ARG GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE SEQRES 21 A 350 PRO GLN ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG SEQRES 22 A 350 PRO ARG THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG SEQRES 23 A 350 LEU LEU GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU SEQRES 24 A 350 GLU ALA CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP SEQRES 25 A 350 PRO ASN VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA SEQRES 26 A 350 LEU PHE ASN PHE THR THR GLN GLU LEU SER SER ASN PRO SEQRES 27 A 350 PRO LEU ALA THR ILE LEU ILE PRO PRO HIS ALA ARG SEQRES 1 B 350 LEU SER LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN SEQRES 2 B 350 GLY PRO ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR SEQRES 3 B 350 LYS VAL ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN SEQRES 4 B 350 ALA LYS LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS SEQRES 5 B 350 LYS VAL LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU SEQRES 6 B 350 GLN ILE MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG SEQRES 7 B 350 LEU ARG TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP SEQRES 8 B 350 GLU VAL TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU SEQRES 9 B 350 THR VAL TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS SEQRES 10 B 350 GLN THR LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR SEQRES 11 B 350 GLN LEU PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY SEQRES 12 B 350 ILE CYS HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU SEQRES 13 B 350 ASP PRO ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SEQRES 14 B 350 SER ALA LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER SEQRES 15 B 350 PTR ILE CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE SEQRES 16 B 350 PHE GLY ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SEQRES 17 B 350 SER ALA GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN SEQRES 18 B 350 PRO ILE PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL SEQRES 19 B 350 GLU ILE ILE LYS VAL LEU GLY THR PRO THR ARG GLU GLN SEQRES 20 B 350 ILE ARG GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE SEQRES 21 B 350 PRO GLN ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG SEQRES 22 B 350 PRO ARG THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG SEQRES 23 B 350 LEU LEU GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU SEQRES 24 B 350 GLU ALA CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP SEQRES 25 B 350 PRO ASN VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA SEQRES 26 B 350 LEU PHE ASN PHE THR THR GLN GLU LEU SER SER ASN PRO SEQRES 27 B 350 PRO LEU ALA THR ILE LEU ILE PRO PRO HIS ALA ARG MODRES 3F7Z PTR A 216 TYR O-PHOSPHOTYROSINE MODRES 3F7Z PTR B 216 TYR O-PHOSPHOTYROSINE HET PTR A 216 16 HET PTR B 216 16 HET 34O A3000 25 HET 34O B3000 25 HETNAM PTR O-PHOSPHOTYROSINE HETNAM 34O 2-(1,3-BENZODIOXOL-5-YL)-5-[(3-FLUORO-4-METHOXYBENZYL) HETNAM 2 34O SULFANYL]-1,3,4-OXADIAZOLE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 3 34O 2(C17 H13 F N2 O4 S) FORMUL 5 HOH *232(H2 O) HELIX 1 1 ASN A 95 LEU A 104 1 10 HELIX 2 2 VAL A 139 ALA A 149 1 11 HELIX 3 3 PRO A 154 SER A 174 1 21 HELIX 4 4 LYS A 183 GLN A 185 5 3 HELIX 5 5 SER A 219 ARG A 223 5 5 HELIX 6 6 ALA A 224 PHE A 229 1 6 HELIX 7 7 SER A 236 GLY A 253 1 18 HELIX 8 8 VAL A 263 GLY A 274 1 12 HELIX 9 9 THR A 277 ASN A 285 1 9 HELIX 10 10 PRO A 300 PHE A 305 1 6 HELIX 11 11 PRO A 310 LEU A 321 1 12 HELIX 12 12 THR A 324 ARG A 328 5 5 HELIX 13 13 THR A 330 ALA A 336 1 7 HELIX 14 14 HIS A 337 ASP A 345 5 9 HELIX 15 15 THR A 363 SER A 368 1 6 HELIX 16 16 ASN A 370 PRO A 372 5 3 HELIX 17 17 LEU A 373 ILE A 378 1 6 HELIX 18 18 PRO A 379 ARG A 383 5 5 HELIX 19 19 ASN B 95 ARG B 102 1 8 HELIX 20 20 VAL B 139 ALA B 149 1 11 HELIX 21 21 PRO B 154 PHE B 175 1 22 HELIX 22 22 LYS B 183 GLN B 185 5 3 HELIX 23 23 SER B 219 ARG B 223 5 5 HELIX 24 24 ALA B 224 PHE B 229 1 6 HELIX 25 25 SER B 236 GLY B 253 1 18 HELIX 26 26 VAL B 263 GLY B 274 1 12 HELIX 27 27 THR B 277 ASN B 285 1 9 HELIX 28 28 PRO B 300 PHE B 305 1 6 HELIX 29 29 PRO B 310 ARG B 319 1 10 HELIX 30 30 THR B 330 ALA B 336 1 7 HELIX 31 31 HIS B 337 ASP B 345 5 9 HELIX 32 32 THR B 363 SER B 368 1 6 HELIX 33 33 ASN B 370 PRO B 372 5 3 HELIX 34 34 LEU B 373 ILE B 378 1 6 HELIX 35 35 PRO B 379 ARG B 383 5 5 SHEET 1 A 7 THR A 38 PRO A 44 0 SHEET 2 A 7 GLN A 52 GLY A 65 -1 O GLN A 52 N ALA A 42 SHEET 3 A 7 GLY A 68 LEU A 75 -1 O LYS A 74 N THR A 57 SHEET 4 A 7 LEU A 81 LEU A 88 -1 O LYS A 86 N VAL A 69 SHEET 5 A 7 VAL A 126 ASP A 133 -1 O LEU A 132 N ALA A 83 SHEET 6 A 7 LEU A 112 SER A 119 -1 N TYR A 114 O VAL A 131 SHEET 7 A 7 THR A 38 PRO A 44 -1 N THR A 43 O PHE A 115 SHEET 1 B 3 GLU A 137 THR A 138 0 SHEET 2 B 3 LEU A 187 LEU A 189 -1 O LEU A 189 N GLU A 137 SHEET 3 B 3 LEU A 196 LEU A 198 -1 O LYS A 197 N LEU A 188 SHEET 1 C 2 ILE A 177 CYS A 178 0 SHEET 2 C 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 SHEET 1 D 7 THR B 38 PRO B 44 0 SHEET 2 D 7 GLN B 52 ASN B 64 -1 O TYR B 56 N THR B 38 SHEET 3 D 7 GLY B 68 LEU B 75 -1 O VAL B 70 N ILE B 62 SHEET 4 D 7 LEU B 81 LEU B 88 -1 O ILE B 84 N TYR B 71 SHEET 5 D 7 TYR B 127 ASP B 133 -1 O LEU B 132 N ALA B 83 SHEET 6 D 7 LEU B 112 SER B 118 -1 N TYR B 114 O VAL B 131 SHEET 7 D 7 THR B 38 PRO B 44 -1 N THR B 43 O PHE B 115 SHEET 1 E 3 GLU B 137 THR B 138 0 SHEET 2 E 3 LEU B 187 ASP B 190 -1 O LEU B 189 N GLU B 137 SHEET 3 E 3 VAL B 195 LEU B 198 -1 O LYS B 197 N LEU B 188 SHEET 1 F 2 ILE B 177 CYS B 178 0 SHEET 2 F 2 LYS B 205 GLN B 206 -1 O LYS B 205 N CYS B 178 LINK C SER A 215 N PTR A 216 1555 1555 1.33 LINK C PTR A 216 N ILE A 217 1555 1555 1.33 LINK C SER B 215 N PTR B 216 1555 1555 1.33 LINK C PTR B 216 N ILE B 217 1555 1555 1.33 SITE 1 AC1 11 ILE A 62 PHE A 67 ALA A 83 LYS A 85 SITE 2 AC1 11 LEU A 132 ASP A 133 TYR A 134 VAL A 135 SITE 3 AC1 11 LEU A 188 ASP A 200 HOH A 588 SITE 1 AC2 13 ILE B 62 ALA B 83 LYS B 85 VAL B 110 SITE 2 AC2 13 LEU B 132 ASP B 133 TYR B 134 VAL B 135 SITE 3 AC2 13 GLN B 185 LEU B 188 ASP B 200 HOH B 468 SITE 4 AC2 13 HOH B 545 CRYST1 67.622 117.230 67.351 90.00 102.71 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014788 0.000000 0.003334 0.00000 SCALE2 0.000000 0.008530 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015220 0.00000