HEADER TRANSCRIPTION 21-NOV-08 3FC6 TITLE HRXRALPHA & MLXRALPHA WITH AN INDOLE PHARMACOPHORE, SB786875 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINOIC ACID RECEPTOR RXR-ALPHA; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: RETINOID X RECEPTOR ALPHA, NUCLEAR RECEPTOR SUBFAMILY 2 COMPND 5 GROUP B MEMBER 1; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NR1H3 PROTEIN; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: PUTATIVE UNCHARACTERIZED PROTEIN, NUCLEAR RECEPTOR SUBFAMILY COMPND 10 1 GROUP H MEMBER 3, NUCLEAR RECEPTOR SUBFAMILY 1, GROUP H, MEMBER 3, COMPND 11 NUCLEAR RECEPTOR SUBFAMILY 1, GROUP H, MEMBER 3, ISOFORM CRA_A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS LIVER X RECEPTOR, NUCLEAR HORMONE RECEPTORS, AGONISTS, KEYWDS 2 EPOXYCHOLESTEROL, DNA-BINDING, HOST-VIRUS INTERACTION, METAL- KEYWDS 3 BINDING, NUCLEUS, POLYMORPHISM, RECEPTOR, TRANSCRIPTION, KEYWDS 4 TRANSCRIPTION REGULATION, UBL CONJUGATION, ZINC, ZINC-FINGER EXPDTA X-RAY DIFFRACTION AUTHOR D.G.WASHBURN,T.H.HOANG,N.CAMPOBASSO,A.SMALLWOOD,D.J.PARKS,C.L.WEBB, AUTHOR 2 K.FRANK,M.NORD,C.DURAISWAMI,C.EVANS,M.JAYE,S.K.THOMPSON REVDAT 3 27-DEC-23 3FC6 1 REMARK SEQADV REVDAT 2 03-MAR-09 3FC6 1 JRNL REVDAT 1 10-FEB-09 3FC6 0 JRNL AUTH D.G.WASHBURN,T.H.HOANG,N.CAMPOBASSO,A.SMALLWOOD,D.J.PARKS, JRNL AUTH 2 C.L.WEBB,K.A.FRANK,M.NORD,C.DURAISWAMI,C.EVANS,M.JAYE, JRNL AUTH 3 S.K.THOMPSON JRNL TITL SYNTHESIS AND SAR OF POTENT LXR AGONISTS CONTAINING AN JRNL TITL 2 INDOLE PHARMACOPHORE. JRNL REF BIOORG.MED.CHEM.LETT. V. 19 1097 2009 JRNL REFN ISSN 0960-894X JRNL PMID 19167885 JRNL DOI 10.1016/J.BMCL.2009.01.004 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.3 REMARK 3 NUMBER OF REFLECTIONS : 55572 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2313 - 5.5950 0.98 3022 151 0.1760 0.2164 REMARK 3 2 5.5950 - 4.4423 0.99 2982 157 0.1664 0.2070 REMARK 3 3 4.4423 - 3.8811 0.99 2960 161 0.1511 0.2118 REMARK 3 4 3.8811 - 3.5264 0.98 2928 183 0.1741 0.2040 REMARK 3 5 3.5264 - 3.2737 0.98 2942 134 0.1979 0.2458 REMARK 3 6 3.2737 - 3.0808 0.97 2879 167 0.2124 0.2401 REMARK 3 7 3.0808 - 2.9265 0.96 2889 150 0.2164 0.2693 REMARK 3 8 2.9265 - 2.7992 0.95 2863 136 0.2076 0.2933 REMARK 3 9 2.7992 - 2.6914 0.94 2807 159 0.2223 0.2575 REMARK 3 10 2.6914 - 2.5985 0.93 2770 149 0.2169 0.2711 REMARK 3 11 2.5985 - 2.5173 0.92 2750 141 0.2168 0.2867 REMARK 3 12 2.5173 - 2.4454 0.92 2736 140 0.2095 0.2335 REMARK 3 13 2.4454 - 2.3810 0.90 2685 143 0.1994 0.2390 REMARK 3 14 2.3810 - 2.3229 0.89 2631 147 0.2002 0.2693 REMARK 3 15 2.3229 - 2.2701 0.85 2529 145 0.2066 0.2809 REMARK 3 16 2.2701 - 2.2218 0.80 2356 126 0.2167 0.3037 REMARK 3 17 2.2218 - 2.1773 0.76 2273 110 0.2344 0.2996 REMARK 3 18 2.1773 - 2.1363 0.72 2150 126 0.2496 0.3285 REMARK 3 19 2.1363 - 2.0981 0.66 1953 114 0.2660 0.3358 REMARK 3 20 2.0981 - 2.0630 0.55 1647 81 0.2675 0.3673 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 31.17 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050408. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58748 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 44.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.08100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.01450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.08100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.01450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 221 REMARK 465 LYS A 222 REMARK 465 LYS A 223 REMARK 465 GLY A 224 REMARK 465 GLU A 243 REMARK 465 PRO A 244 REMARK 465 LYS A 245 REMARK 465 THR A 246 REMARK 465 GLU A 247 REMARK 465 THR A 248 REMARK 465 TYR A 249 REMARK 465 VAL A 250 REMARK 465 GLU A 251 REMARK 465 ALA A 252 REMARK 465 ASN A 253 REMARK 465 MET A 254 REMARK 465 GLY A 255 REMARK 465 LEU A 256 REMARK 465 ASN A 257 REMARK 465 PRO A 258 REMARK 465 SER A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 ASN A 262 REMARK 465 ILE A 442 REMARK 465 GLY A 443 REMARK 465 ASP A 444 REMARK 465 THR A 445 REMARK 465 PRO A 446 REMARK 465 ILE A 447 REMARK 465 PRO A 458 REMARK 465 HIS A 459 REMARK 465 GLN A 460 REMARK 465 MET A 461 REMARK 465 THR A 462 REMARK 465 MET B 180 REMARK 465 ARG B 181 REMARK 465 GLY B 182 REMARK 465 SER B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 465 GLY B 190 REMARK 465 MET B 191 REMARK 465 ALA B 192 REMARK 465 SER B 193 REMARK 465 LEU B 194 REMARK 465 VAL B 195 REMARK 465 PRO B 196 REMARK 465 ARG B 197 REMARK 465 GLY B 198 REMARK 465 SER B 199 REMARK 465 VAL B 200 REMARK 465 LEU B 201 REMARK 465 PRO B 202 REMARK 465 HIS B 444 REMARK 465 GLU B 445 REMARK 465 MET C 221 REMARK 465 LYS C 222 REMARK 465 LYS C 223 REMARK 465 GLY C 224 REMARK 465 LYS C 245 REMARK 465 THR C 246 REMARK 465 GLU C 247 REMARK 465 THR C 248 REMARK 465 TYR C 249 REMARK 465 VAL C 250 REMARK 465 GLU C 251 REMARK 465 ALA C 252 REMARK 465 ASN C 253 REMARK 465 MET C 254 REMARK 465 GLY C 255 REMARK 465 LEU C 256 REMARK 465 ASN C 257 REMARK 465 PRO C 258 REMARK 465 SER C 259 REMARK 465 SER C 260 REMARK 465 PRO C 261 REMARK 465 ASN C 262 REMARK 465 HIS C 435 REMARK 465 LEU C 436 REMARK 465 PHE C 437 REMARK 465 PHE C 438 REMARK 465 PHE C 439 REMARK 465 LYS C 440 REMARK 465 LEU C 441 REMARK 465 ILE C 442 REMARK 465 GLY C 443 REMARK 465 ASP C 444 REMARK 465 THR C 445 REMARK 465 PRO C 446 REMARK 465 ILE C 447 REMARK 465 PRO C 458 REMARK 465 HIS C 459 REMARK 465 GLN C 460 REMARK 465 MET C 461 REMARK 465 THR C 462 REMARK 465 MET D 180 REMARK 465 ARG D 181 REMARK 465 GLY D 182 REMARK 465 SER D 183 REMARK 465 HIS D 184 REMARK 465 HIS D 185 REMARK 465 HIS D 186 REMARK 465 HIS D 187 REMARK 465 HIS D 188 REMARK 465 HIS D 189 REMARK 465 GLY D 190 REMARK 465 MET D 191 REMARK 465 ALA D 192 REMARK 465 SER D 193 REMARK 465 LEU D 194 REMARK 465 VAL D 195 REMARK 465 PRO D 196 REMARK 465 ARG D 197 REMARK 465 GLY D 198 REMARK 465 SER D 199 REMARK 465 VAL D 200 REMARK 465 LEU D 201 REMARK 465 PRO D 202 REMARK 465 HIS D 444 REMARK 465 GLU D 445 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 230 74.90 -155.54 REMARK 500 PRO A 287 122.29 -39.50 REMARK 500 HIS A 288 -12.52 81.44 REMARK 500 LYS A 321 -77.21 -69.43 REMARK 500 LEU A 353 -69.55 -104.31 REMARK 500 LEU A 436 -70.69 -17.89 REMARK 500 ASP B 241 108.33 -178.14 REMARK 500 LYS B 315 -41.89 75.92 REMARK 500 ASN B 369 5.06 80.63 REMARK 500 MET C 230 78.57 -160.97 REMARK 500 HIS C 288 -15.41 78.90 REMARK 500 LEU C 353 -70.60 -113.98 REMARK 500 ASN C 385 89.45 -150.84 REMARK 500 CYS C 432 -6.90 -58.66 REMARK 500 ASP D 241 103.94 -172.85 REMARK 500 GLU D 309 57.27 38.77 REMARK 500 LYS D 315 -32.58 68.92 REMARK 500 GLN D 371 -60.85 -91.04 REMARK 500 ASP D 430 50.92 38.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE REA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE REA C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LX2 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LX2 D 1 DBREF 3FC6 A 225 462 UNP P19793 RXRA_HUMAN 225 462 DBREF 3FC6 B 200 445 UNP Q91X41 Q91X41_MOUSE 200 445 DBREF 3FC6 C 225 462 UNP P19793 RXRA_HUMAN 225 462 DBREF 3FC6 D 200 445 UNP Q91X41 Q91X41_MOUSE 200 445 SEQADV 3FC6 MET A 221 UNP P19793 EXPRESSION TAG SEQADV 3FC6 LYS A 222 UNP P19793 EXPRESSION TAG SEQADV 3FC6 LYS A 223 UNP P19793 EXPRESSION TAG SEQADV 3FC6 GLY A 224 UNP P19793 EXPRESSION TAG SEQADV 3FC6 MET B 180 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 ARG B 181 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 GLY B 182 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 SER B 183 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS B 184 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS B 185 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS B 186 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS B 187 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS B 188 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS B 189 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 GLY B 190 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 MET B 191 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 ALA B 192 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 SER B 193 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 LEU B 194 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 VAL B 195 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 PRO B 196 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 ARG B 197 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 GLY B 198 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 SER B 199 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 MET C 221 UNP P19793 EXPRESSION TAG SEQADV 3FC6 LYS C 222 UNP P19793 EXPRESSION TAG SEQADV 3FC6 LYS C 223 UNP P19793 EXPRESSION TAG SEQADV 3FC6 GLY C 224 UNP P19793 EXPRESSION TAG SEQADV 3FC6 MET D 180 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 ARG D 181 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 GLY D 182 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 SER D 183 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS D 184 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS D 185 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS D 186 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS D 187 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS D 188 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 HIS D 189 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 GLY D 190 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 MET D 191 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 ALA D 192 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 SER D 193 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 LEU D 194 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 VAL D 195 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 PRO D 196 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 ARG D 197 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 GLY D 198 UNP Q91X41 EXPRESSION TAG SEQADV 3FC6 SER D 199 UNP Q91X41 EXPRESSION TAG SEQRES 1 A 242 MET LYS LYS GLY SER ALA ASN GLU ASP MET PRO VAL GLU SEQRES 2 A 242 ARG ILE LEU GLU ALA GLU LEU ALA VAL GLU PRO LYS THR SEQRES 3 A 242 GLU THR TYR VAL GLU ALA ASN MET GLY LEU ASN PRO SER SEQRES 4 A 242 SER PRO ASN ASP PRO VAL THR ASN ILE CYS GLN ALA ALA SEQRES 5 A 242 ASP LYS GLN LEU PHE THR LEU VAL GLU TRP ALA LYS ARG SEQRES 6 A 242 ILE PRO HIS PHE SER GLU LEU PRO LEU ASP ASP GLN VAL SEQRES 7 A 242 ILE LEU LEU ARG ALA GLY TRP ASN GLU LEU LEU ILE ALA SEQRES 8 A 242 SER PHE SER HIS ARG SER ILE ALA VAL LYS ASP GLY ILE SEQRES 9 A 242 LEU LEU ALA THR GLY LEU HIS VAL HIS ARG ASN SER ALA SEQRES 10 A 242 HIS SER ALA GLY VAL GLY ALA ILE PHE ASP ARG VAL LEU SEQRES 11 A 242 THR GLU LEU VAL SER LYS MET ARG ASP MET GLN MET ASP SEQRES 12 A 242 LYS THR GLU LEU GLY CYS LEU ARG ALA ILE VAL LEU PHE SEQRES 13 A 242 ASN PRO ASP SER LYS GLY LEU SER ASN PRO ALA GLU VAL SEQRES 14 A 242 GLU ALA LEU ARG GLU LYS VAL TYR ALA SER LEU GLU ALA SEQRES 15 A 242 TYR CYS LYS HIS LYS TYR PRO GLU GLN PRO GLY ARG PHE SEQRES 16 A 242 ALA LYS LEU LEU LEU ARG LEU PRO ALA LEU ARG SER ILE SEQRES 17 A 242 GLY LEU LYS CYS LEU GLU HIS LEU PHE PHE PHE LYS LEU SEQRES 18 A 242 ILE GLY ASP THR PRO ILE ASP THR PHE LEU MET GLU MET SEQRES 19 A 242 LEU GLU ALA PRO HIS GLN MET THR SEQRES 1 B 266 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 266 SER LEU VAL PRO ARG GLY SER VAL LEU PRO GLN LEU SER SEQRES 3 B 266 PRO GLU GLN LEU GLY MET ILE GLU LYS LEU VAL ALA ALA SEQRES 4 B 266 GLN GLN GLN CYS ASN ARG ARG SER PHE SER ASP ARG LEU SEQRES 5 B 266 ARG VAL THR PRO TRP PRO ILE ALA PRO ASP PRO GLN SER SEQRES 6 B 266 ARG GLU ALA ARG GLN GLN ARG PHE ALA HIS PHE THR GLU SEQRES 7 B 266 LEU ALA ILE VAL SER VAL GLN GLU ILE VAL ASP PHE ALA SEQRES 8 B 266 LYS GLN LEU PRO GLY PHE LEU GLN LEU SER ARG GLU ASP SEQRES 9 B 266 GLN ILE ALA LEU LEU LYS THR SER ALA ILE GLU VAL MET SEQRES 10 B 266 LEU LEU GLU THR SER ARG ARG TYR ASN PRO GLY SER GLU SEQRES 11 B 266 SER ILE THR PHE LEU LYS ASP PHE SER TYR ASN ARG GLU SEQRES 12 B 266 ASP PHE ALA LYS ALA GLY LEU GLN VAL GLU PHE ILE ASN SEQRES 13 B 266 PRO ILE PHE GLU PHE SER ARG ALA MET ASN GLU LEU GLN SEQRES 14 B 266 LEU ASN ASP ALA GLU PHE ALA LEU LEU ILE ALA ILE SER SEQRES 15 B 266 ILE PHE SER ALA ASP ARG PRO ASN VAL GLN ASP GLN LEU SEQRES 16 B 266 GLN VAL GLU ARG LEU GLN HIS THR TYR VAL GLU ALA LEU SEQRES 17 B 266 HIS ALA TYR VAL SER ILE ASN HIS PRO HIS ASP PRO LEU SEQRES 18 B 266 MET PHE PRO ARG MET LEU MET LYS LEU VAL SER LEU ARG SEQRES 19 B 266 THR LEU SER SER VAL HIS SER GLU GLN VAL PHE ALA LEU SEQRES 20 B 266 ARG LEU GLN ASP LYS LYS LEU PRO PRO LEU LEU SER GLU SEQRES 21 B 266 ILE TRP ASP VAL HIS GLU SEQRES 1 C 242 MET LYS LYS GLY SER ALA ASN GLU ASP MET PRO VAL GLU SEQRES 2 C 242 ARG ILE LEU GLU ALA GLU LEU ALA VAL GLU PRO LYS THR SEQRES 3 C 242 GLU THR TYR VAL GLU ALA ASN MET GLY LEU ASN PRO SER SEQRES 4 C 242 SER PRO ASN ASP PRO VAL THR ASN ILE CYS GLN ALA ALA SEQRES 5 C 242 ASP LYS GLN LEU PHE THR LEU VAL GLU TRP ALA LYS ARG SEQRES 6 C 242 ILE PRO HIS PHE SER GLU LEU PRO LEU ASP ASP GLN VAL SEQRES 7 C 242 ILE LEU LEU ARG ALA GLY TRP ASN GLU LEU LEU ILE ALA SEQRES 8 C 242 SER PHE SER HIS ARG SER ILE ALA VAL LYS ASP GLY ILE SEQRES 9 C 242 LEU LEU ALA THR GLY LEU HIS VAL HIS ARG ASN SER ALA SEQRES 10 C 242 HIS SER ALA GLY VAL GLY ALA ILE PHE ASP ARG VAL LEU SEQRES 11 C 242 THR GLU LEU VAL SER LYS MET ARG ASP MET GLN MET ASP SEQRES 12 C 242 LYS THR GLU LEU GLY CYS LEU ARG ALA ILE VAL LEU PHE SEQRES 13 C 242 ASN PRO ASP SER LYS GLY LEU SER ASN PRO ALA GLU VAL SEQRES 14 C 242 GLU ALA LEU ARG GLU LYS VAL TYR ALA SER LEU GLU ALA SEQRES 15 C 242 TYR CYS LYS HIS LYS TYR PRO GLU GLN PRO GLY ARG PHE SEQRES 16 C 242 ALA LYS LEU LEU LEU ARG LEU PRO ALA LEU ARG SER ILE SEQRES 17 C 242 GLY LEU LYS CYS LEU GLU HIS LEU PHE PHE PHE LYS LEU SEQRES 18 C 242 ILE GLY ASP THR PRO ILE ASP THR PHE LEU MET GLU MET SEQRES 19 C 242 LEU GLU ALA PRO HIS GLN MET THR SEQRES 1 D 266 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 D 266 SER LEU VAL PRO ARG GLY SER VAL LEU PRO GLN LEU SER SEQRES 3 D 266 PRO GLU GLN LEU GLY MET ILE GLU LYS LEU VAL ALA ALA SEQRES 4 D 266 GLN GLN GLN CYS ASN ARG ARG SER PHE SER ASP ARG LEU SEQRES 5 D 266 ARG VAL THR PRO TRP PRO ILE ALA PRO ASP PRO GLN SER SEQRES 6 D 266 ARG GLU ALA ARG GLN GLN ARG PHE ALA HIS PHE THR GLU SEQRES 7 D 266 LEU ALA ILE VAL SER VAL GLN GLU ILE VAL ASP PHE ALA SEQRES 8 D 266 LYS GLN LEU PRO GLY PHE LEU GLN LEU SER ARG GLU ASP SEQRES 9 D 266 GLN ILE ALA LEU LEU LYS THR SER ALA ILE GLU VAL MET SEQRES 10 D 266 LEU LEU GLU THR SER ARG ARG TYR ASN PRO GLY SER GLU SEQRES 11 D 266 SER ILE THR PHE LEU LYS ASP PHE SER TYR ASN ARG GLU SEQRES 12 D 266 ASP PHE ALA LYS ALA GLY LEU GLN VAL GLU PHE ILE ASN SEQRES 13 D 266 PRO ILE PHE GLU PHE SER ARG ALA MET ASN GLU LEU GLN SEQRES 14 D 266 LEU ASN ASP ALA GLU PHE ALA LEU LEU ILE ALA ILE SER SEQRES 15 D 266 ILE PHE SER ALA ASP ARG PRO ASN VAL GLN ASP GLN LEU SEQRES 16 D 266 GLN VAL GLU ARG LEU GLN HIS THR TYR VAL GLU ALA LEU SEQRES 17 D 266 HIS ALA TYR VAL SER ILE ASN HIS PRO HIS ASP PRO LEU SEQRES 18 D 266 MET PHE PRO ARG MET LEU MET LYS LEU VAL SER LEU ARG SEQRES 19 D 266 THR LEU SER SER VAL HIS SER GLU GLN VAL PHE ALA LEU SEQRES 20 D 266 ARG LEU GLN ASP LYS LYS LEU PRO PRO LEU LEU SER GLU SEQRES 21 D 266 ILE TRP ASP VAL HIS GLU HET REA A 501 22 HET LX2 B 1 44 HET REA C 501 22 HET LX2 D 1 44 HETNAM REA RETINOIC ACID HETNAM LX2 [4-(3-{[2-CHLORO-3-(TRIFLUOROMETHYL)BENZYL](2,2- HETNAM 2 LX2 DIPHENYLETHYL)AMINO}PROPOXY)-1H-INDOL-1-YL]ACETIC ACID FORMUL 5 REA 2(C20 H28 O2) FORMUL 6 LX2 2(C35 H32 CL F3 N2 O3) FORMUL 9 HOH *229(H2 O) HELIX 1 1 SER A 225 MET A 230 1 6 HELIX 2 2 PRO A 231 VAL A 242 1 12 HELIX 3 3 ASP A 263 LEU A 276 1 14 HELIX 4 4 PHE A 277 ARG A 285 1 9 HELIX 5 5 HIS A 288 LEU A 292 5 5 HELIX 6 6 PRO A 293 SER A 317 1 25 HELIX 7 7 ILE A 318 VAL A 320 5 3 HELIX 8 8 ARG A 334 ALA A 340 1 7 HELIX 9 9 VAL A 342 LEU A 353 1 12 HELIX 10 10 LEU A 353 GLN A 361 1 9 HELIX 11 11 ASP A 363 PHE A 376 1 14 HELIX 12 12 ASN A 385 TYR A 408 1 24 HELIX 13 13 GLY A 413 LEU A 420 1 8 HELIX 14 14 ARG A 421 GLU A 434 1 14 HELIX 15 15 HIS A 435 LEU A 441 1 7 HELIX 16 16 ASP A 448 ALA A 457 1 10 HELIX 17 17 SER B 205 SER B 228 1 24 HELIX 18 18 ASP B 229 VAL B 233 5 5 HELIX 19 19 SER B 244 LEU B 273 1 30 HELIX 20 20 SER B 280 ARG B 302 1 23 HELIX 21 21 ASN B 320 LYS B 326 1 7 HELIX 22 22 GLN B 330 GLN B 348 1 19 HELIX 23 23 ASN B 350 PHE B 363 1 14 HELIX 24 24 ASP B 372 HIS B 395 1 24 HELIX 25 25 LEU B 400 GLN B 429 1 30 HELIX 26 26 PRO B 434 ASP B 442 1 9 HELIX 27 27 SER C 225 MET C 230 1 6 HELIX 28 28 PRO C 231 VAL C 242 1 12 HELIX 29 29 ASP C 263 LEU C 276 1 14 HELIX 30 30 PHE C 277 ILE C 286 1 10 HELIX 31 31 HIS C 288 LEU C 292 5 5 HELIX 32 32 PRO C 293 SER C 317 1 25 HELIX 33 33 ARG C 334 ALA C 340 1 7 HELIX 34 34 VAL C 342 LEU C 353 1 12 HELIX 35 35 LEU C 353 GLN C 361 1 9 HELIX 36 36 ASP C 363 PHE C 376 1 14 HELIX 37 37 ASN C 385 TYR C 408 1 24 HELIX 38 38 GLY C 413 LEU C 420 1 8 HELIX 39 39 ARG C 421 CYS C 432 1 12 HELIX 40 40 ASP C 448 ALA C 457 1 10 HELIX 41 41 SER D 205 SER D 228 1 24 HELIX 42 42 ASP D 229 VAL D 233 5 5 HELIX 43 43 SER D 244 LYS D 271 1 28 HELIX 44 44 GLY D 275 LEU D 279 5 5 HELIX 45 45 SER D 280 ARG D 302 1 23 HELIX 46 46 ASN D 320 ALA D 327 1 8 HELIX 47 47 GLN D 330 GLN D 348 1 19 HELIX 48 48 ASN D 350 PHE D 363 1 14 HELIX 49 49 ASP D 372 HIS D 395 1 24 HELIX 50 50 LEU D 400 GLN D 429 1 30 HELIX 51 51 PRO D 434 ASP D 442 1 9 SHEET 1 A 2 GLY A 323 LEU A 325 0 SHEET 2 A 2 HIS A 331 HIS A 333 -1 O VAL A 332 N ILE A 324 SHEET 1 B 3 TYR B 304 ASN B 305 0 SHEET 2 B 3 SER B 310 PHE B 313 -1 O SER B 310 N ASN B 305 SHEET 3 B 3 PHE B 317 TYR B 319 -1 O PHE B 317 N PHE B 313 SHEET 1 C 2 GLY C 323 LEU C 325 0 SHEET 2 C 2 HIS C 331 HIS C 333 -1 O VAL C 332 N ILE C 324 SHEET 1 D 3 TYR D 304 ASN D 305 0 SHEET 2 D 3 SER D 310 PHE D 313 -1 O SER D 310 N ASN D 305 SHEET 3 D 3 PHE D 317 TYR D 319 -1 O TYR D 319 N ILE D 311 SITE 1 AC1 7 ALA A 271 ALA A 272 GLN A 275 PHE A 313 SITE 2 AC1 7 ARG A 316 LEU A 326 ALA A 327 SITE 1 AC2 9 HOH C 2 ALA C 271 ALA C 272 GLN C 275 SITE 2 AC2 9 PHE C 313 ARG C 316 LEU C 326 ALA C 327 SITE 3 AC2 9 CYS C 432 SITE 1 AC3 20 HOH B 63 ASN B 223 PHE B 255 LEU B 258 SITE 2 AC3 20 SER B 262 MET B 296 THR B 300 ARG B 303 SITE 3 AC3 20 ILE B 311 PHE B 313 LEU B 314 PHE B 324 SITE 4 AC3 20 LEU B 329 ILE B 337 PHE B 338 HIS B 419 SITE 5 AC3 20 GLN B 422 LEU B 426 LEU B 433 TRP B 441 SITE 1 AC4 21 ASN D 223 PHE D 255 LEU D 258 SER D 262 SITE 2 AC4 21 ILE D 293 MET D 296 LEU D 297 THR D 300 SITE 3 AC4 21 ARG D 303 ILE D 311 PHE D 313 LEU D 314 SITE 4 AC4 21 PHE D 324 PHE D 333 ILE D 337 PHE D 338 SITE 5 AC4 21 HIS D 419 LEU D 426 LEU D 433 TRP D 441 SITE 6 AC4 21 HOH D 456 CRYST1 122.162 90.029 101.642 90.00 111.92 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008186 0.000000 0.003295 0.00000 SCALE2 0.000000 0.011108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010605 0.00000