HEADER LYASE 24-NOV-08 3FD0 TITLE CRYSTAL STRUCTURE OF PUTATIVE CYSTATHIONINE BETA-LYASE INVOLVED IN TITLE 2 ALUMINUM RESISTANCE (NP_470671.1) FROM LISTERIA INNOCUA AT 2.12 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CYSTATHIONINE BETA-LYASE INVOLVED IN ALUMINUM COMPND 3 RESISTANCE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: LIN1335 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; SOURCE 3 ORGANISM_TAXID: 1642; SOURCE 4 GENE: LIN1335, NP_470671.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_470671.1, PUTATIVE CYSTATHIONINE BETA-LYASE INVOLVED IN ALUMINUM KEYWDS 2 RESISTANCE, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN KEYWDS 4 FUNCTION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3FD0 1 REMARK SEQADV LINK REVDAT 4 24-JUL-19 3FD0 1 REMARK LINK REVDAT 3 01-NOV-17 3FD0 1 REMARK REVDAT 2 13-JUL-11 3FD0 1 VERSN REVDAT 1 09-DEC-08 3FD0 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE CYSTATHIONINE BETA-LYASE JRNL TITL 2 INVOLVED IN ALUMINUM RESISTANCE (NP_470671.1) FROM LISTERIA JRNL TITL 3 INNOCUA AT 2.12 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 66656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3382 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.12 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4612 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 248 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6279 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 154 REMARK 3 SOLVENT ATOMS : 497 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 32.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.61000 REMARK 3 B22 (A**2) : -0.61000 REMARK 3 B33 (A**2) : 0.92000 REMARK 3 B12 (A**2) : -0.31000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.550 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6581 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4474 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8878 ; 1.643 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10923 ; 1.489 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 832 ; 3.559 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 286 ;32.198 ;24.685 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1060 ;12.377 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;11.679 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 992 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7292 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1275 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4071 ; 1.545 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1675 ; 0.433 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6571 ; 2.555 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2510 ; 4.725 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2298 ; 6.816 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 408 5 REMARK 3 1 B 1 B 408 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 408 REMARK 3 ORIGIN FOR THE GROUP (A): 77.6239 60.0722 26.6484 REMARK 3 T TENSOR REMARK 3 T11: -0.0843 T22: -0.0549 REMARK 3 T33: -0.0695 T12: -0.0126 REMARK 3 T13: 0.0201 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.6520 L22: 0.3914 REMARK 3 L33: 0.4929 L12: 0.0281 REMARK 3 L13: -0.3144 L23: 0.0047 REMARK 3 S TENSOR REMARK 3 S11: -0.0118 S12: 0.0422 S13: -0.0340 REMARK 3 S21: 0.0391 S22: 0.0061 S23: 0.1024 REMARK 3 S31: 0.0346 S32: -0.1467 S33: 0.0057 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 408 REMARK 3 ORIGIN FOR THE GROUP (A): 100.7388 27.2423 32.3095 REMARK 3 T TENSOR REMARK 3 T11: 0.0353 T22: -0.0849 REMARK 3 T33: -0.0282 T12: 0.0027 REMARK 3 T13: -0.0213 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.7715 L22: 0.7427 REMARK 3 L33: 0.5569 L12: 0.0848 REMARK 3 L13: -0.0394 L23: -0.1329 REMARK 3 S TENSOR REMARK 3 S11: 0.0372 S12: -0.1394 S13: -0.2332 REMARK 3 S21: 0.1701 S22: -0.0207 S23: -0.0100 REMARK 3 S31: 0.1360 S32: 0.0247 S33: -0.0165 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.RESIDUE REMARK 3 LYS226 IN BOTH CHAINS HAS BEEN MODELED AS LLP - A LYSINE WITH A REMARK 3 SCHIFF BASE LINKAGE TO PYRIDOXAL-5'PHOSPHATE (PLP). THERE IS REMARK 3 CLEAR AND UNAMBIGUOUS ELECTRON DENSITY IN THE EXPERIMENTALLY REMARK 3 PHASED MAPS FOR THIS COVALENT MODIFICATION. THIS IS AT THE REMARK 3 PUTATIVE ACTIVE SITE OF BOTH PROTOMERS. 5.CALCIUM (CA) AND REMARK 3 POLYETHYLENE GLYCOL FRAGMENTS (PEG AND PGE) FROM THE REMARK 3 CRYSTALLIZATION AND 1,2-ETHANEDIOL (EDO) FROM THE CRYOPROTECTION REMARK 3 CONDITION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. REMARK 4 REMARK 4 3FD0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1000050437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94645,0.97967 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66693 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 29.185 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.130 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.87500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2000M CA(OAC)2, 10.0000% PEG-8000, REMARK 280 0.1M IMIDAZOLE PH 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.91333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.82667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 77.82667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.91333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT CRYSTAL PACKING ANALYSIS SUGGESTS THAT A REMARK 300 TETRAMER IS THE STABLE OLIGOMERIC FORM IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 197.83500 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 114.22009 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.91333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLY B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 9 CD CE NZ REMARK 470 GLN A 13 CD OE1 NE2 REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 GLU A 261 CD OE1 OE2 REMARK 470 LYS A 311 CD CE NZ REMARK 470 GLN B 5 CG CD OE1 NE2 REMARK 470 LYS B 9 CD CE NZ REMARK 470 GLN B 13 CD OE1 NE2 REMARK 470 LYS B 153 CE NZ REMARK 470 LYS B 311 CD CE NZ REMARK 470 GLU B 355 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER B 370 CB - CA - C ANGL. DEV. = -11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 84 -178.24 -171.30 REMARK 500 SER A 122 -159.99 -140.67 REMARK 500 TYR A 203 -7.02 76.96 REMARK 500 LLP A 226 -154.60 -110.73 REMARK 500 THR A 254 -109.83 -112.44 REMARK 500 ILE A 258 -62.42 -105.94 REMARK 500 LEU A 266 -122.92 45.20 REMARK 500 ALA A 362 51.27 -147.60 REMARK 500 GLU B 3 -70.25 -69.50 REMARK 500 TYR B 203 -2.65 78.87 REMARK 500 LLP B 226 -156.35 -116.02 REMARK 500 THR B 254 -108.28 -112.61 REMARK 500 ILE B 258 -60.36 -121.82 REMARK 500 LEU B 266 -129.92 49.21 REMARK 500 ALA B 362 56.70 -153.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 409 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 190 OD1 REMARK 620 2 HOH A 460 O 149.3 REMARK 620 3 HOH A 461 O 101.2 85.2 REMARK 620 4 HOH A 462 O 91.0 84.9 167.7 REMARK 620 5 HOH A 463 O 65.7 84.6 89.6 96.7 REMARK 620 6 HOH A 464 O 144.4 64.6 89.1 80.1 149.2 REMARK 620 7 HOH A 465 O 74.3 136.3 80.8 101.6 136.0 74.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B 421 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 390899 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3FD0 A 1 408 UNP Q92C56 Q92C56_LISIN 1 408 DBREF 3FD0 B 1 408 UNP Q92C56 Q92C56_LISIN 1 408 SEQADV 3FD0 GLY A 0 UNP Q92C56 EXPRESSION TAG SEQADV 3FD0 GLY B 0 UNP Q92C56 EXPRESSION TAG SEQRES 1 A 409 GLY MSE THR GLU ILE GLN THR ILE ARG LYS LYS VAL GLU SEQRES 2 A 409 GLN GLN ILE THR SER LEU GLN ASN GLU THR ASP GLU ILE SEQRES 3 A 409 ALA GLU PHE ASN GLN ALA LYS VAL LEU ASP ALA PHE GLN SEQRES 4 A 409 GLU ASN LYS VAL SER ASP PHE HIS PHE ASN PRO SER THR SEQRES 5 A 409 GLY TYR GLY TYR ASP ASP GLU GLY ARG ASP THR LEU GLU SEQRES 6 A 409 ARG VAL TYR ALA SER VAL PHE LYS THR GLU ALA ALA LEU SEQRES 7 A 409 VAL ARG PRO GLN ILE ILE SER GLY THR HIS ALA ILE SER SEQRES 8 A 409 THR VAL LEU PHE GLY ILE LEU ARG PRO GLY ASP GLU LEU SEQRES 9 A 409 LEU TYR ILE THR GLY GLU PRO TYR ASP THR LEU GLU GLU SEQRES 10 A 409 ILE VAL GLY ILE ARG SER GLU GLY GLN GLY SER LEU LYS SEQRES 11 A 409 ASP PHE GLN ILE GLY TYR ASP ALA VAL PRO LEU LEU PRO SEQRES 12 A 409 ASN GLY GLU ILE ASP TYR PRO ALA VAL SER LYS LYS ILE SEQRES 13 A 409 SER ALA ASN THR LYS MSE ILE GLY ILE GLN ARG SER ARG SEQRES 14 A 409 GLY TYR ALA ASP ARG PRO SER PHE THR ILE GLU LYS ILE SEQRES 15 A 409 LYS GLU MSE VAL THR PHE VAL LYS ASN ILE ASN PRO ASN SEQRES 16 A 409 ILE ILE VAL PHE VAL ASP ASN CYS TYR GLY GLU PHE VAL SEQRES 17 A 409 GLU ARG ILE GLU PRO THR GLU VAL GLY ALA ASP ILE ILE SEQRES 18 A 409 ALA GLY SER LEU ILE LLP ASN PRO GLY GLY GLY LEU ALA SEQRES 19 A 409 LYS THR GLY GLY TYR ILE ALA GLY ARG ASN THR LEU VAL SEQRES 20 A 409 ASP LEU CYS GLY TYR ARG LEU THR THR PRO GLY ILE GLY SEQRES 21 A 409 ARG GLU ALA GLY ALA SER LEU TYR SER LEU LEU GLU MSE SEQRES 22 A 409 TYR GLN GLY PHE PHE LEU ALA PRO HIS VAL THR ALA GLN SEQRES 23 A 409 ALA ILE LYS GLY ALA ARG PHE THR ALA ALA MSE LEU ALA SEQRES 24 A 409 GLU PHE GLY VAL GLU ALA ASP PRO LEU TRP ASP ALA LYS SEQRES 25 A 409 ARG THR ASP LEU ILE GLN SER VAL SER PHE HIS SER LYS SEQRES 26 A 409 ASP LYS MSE ILE ALA PHE ALA GLN ALA ILE GLN ALA ALA SEQRES 27 A 409 SER PRO VAL ASN ALA HIS VAL LEU PRO ILE GLY ALA TYR SEQRES 28 A 409 MSE PRO GLY TYR GLU ASP ASP VAL ILE MSE ALA ALA GLY SEQRES 29 A 409 THR PHE ILE GLN GLY ALA SER LEU GLU LEU THR ALA ASP SEQRES 30 A 409 GLY PRO ILE ARG GLU PRO TYR GLN LEU TYR VAL GLN GLY SEQRES 31 A 409 GLY LEU THR TYR GLU HIS VAL LYS ILE ALA VAL THR ARG SEQRES 32 A 409 ALA ILE GLU ASN SER LEU SEQRES 1 B 409 GLY MSE THR GLU ILE GLN THR ILE ARG LYS LYS VAL GLU SEQRES 2 B 409 GLN GLN ILE THR SER LEU GLN ASN GLU THR ASP GLU ILE SEQRES 3 B 409 ALA GLU PHE ASN GLN ALA LYS VAL LEU ASP ALA PHE GLN SEQRES 4 B 409 GLU ASN LYS VAL SER ASP PHE HIS PHE ASN PRO SER THR SEQRES 5 B 409 GLY TYR GLY TYR ASP ASP GLU GLY ARG ASP THR LEU GLU SEQRES 6 B 409 ARG VAL TYR ALA SER VAL PHE LYS THR GLU ALA ALA LEU SEQRES 7 B 409 VAL ARG PRO GLN ILE ILE SER GLY THR HIS ALA ILE SER SEQRES 8 B 409 THR VAL LEU PHE GLY ILE LEU ARG PRO GLY ASP GLU LEU SEQRES 9 B 409 LEU TYR ILE THR GLY GLU PRO TYR ASP THR LEU GLU GLU SEQRES 10 B 409 ILE VAL GLY ILE ARG SER GLU GLY GLN GLY SER LEU LYS SEQRES 11 B 409 ASP PHE GLN ILE GLY TYR ASP ALA VAL PRO LEU LEU PRO SEQRES 12 B 409 ASN GLY GLU ILE ASP TYR PRO ALA VAL SER LYS LYS ILE SEQRES 13 B 409 SER ALA ASN THR LYS MSE ILE GLY ILE GLN ARG SER ARG SEQRES 14 B 409 GLY TYR ALA ASP ARG PRO SER PHE THR ILE GLU LYS ILE SEQRES 15 B 409 LYS GLU MSE VAL THR PHE VAL LYS ASN ILE ASN PRO ASN SEQRES 16 B 409 ILE ILE VAL PHE VAL ASP ASN CYS TYR GLY GLU PHE VAL SEQRES 17 B 409 GLU ARG ILE GLU PRO THR GLU VAL GLY ALA ASP ILE ILE SEQRES 18 B 409 ALA GLY SER LEU ILE LLP ASN PRO GLY GLY GLY LEU ALA SEQRES 19 B 409 LYS THR GLY GLY TYR ILE ALA GLY ARG ASN THR LEU VAL SEQRES 20 B 409 ASP LEU CYS GLY TYR ARG LEU THR THR PRO GLY ILE GLY SEQRES 21 B 409 ARG GLU ALA GLY ALA SER LEU TYR SER LEU LEU GLU MSE SEQRES 22 B 409 TYR GLN GLY PHE PHE LEU ALA PRO HIS VAL THR ALA GLN SEQRES 23 B 409 ALA ILE LYS GLY ALA ARG PHE THR ALA ALA MSE LEU ALA SEQRES 24 B 409 GLU PHE GLY VAL GLU ALA ASP PRO LEU TRP ASP ALA LYS SEQRES 25 B 409 ARG THR ASP LEU ILE GLN SER VAL SER PHE HIS SER LYS SEQRES 26 B 409 ASP LYS MSE ILE ALA PHE ALA GLN ALA ILE GLN ALA ALA SEQRES 27 B 409 SER PRO VAL ASN ALA HIS VAL LEU PRO ILE GLY ALA TYR SEQRES 28 B 409 MSE PRO GLY TYR GLU ASP ASP VAL ILE MSE ALA ALA GLY SEQRES 29 B 409 THR PHE ILE GLN GLY ALA SER LEU GLU LEU THR ALA ASP SEQRES 30 B 409 GLY PRO ILE ARG GLU PRO TYR GLN LEU TYR VAL GLN GLY SEQRES 31 B 409 GLY LEU THR TYR GLU HIS VAL LYS ILE ALA VAL THR ARG SEQRES 32 B 409 ALA ILE GLU ASN SER LEU MODRES 3FD0 MSE A 1 MET SELENOMETHIONINE MODRES 3FD0 MSE A 161 MET SELENOMETHIONINE MODRES 3FD0 MSE A 184 MET SELENOMETHIONINE MODRES 3FD0 LLP A 226 LYS MODRES 3FD0 MSE A 272 MET SELENOMETHIONINE MODRES 3FD0 MSE A 296 MET SELENOMETHIONINE MODRES 3FD0 MSE A 327 MET SELENOMETHIONINE MODRES 3FD0 MSE A 351 MET SELENOMETHIONINE MODRES 3FD0 MSE A 360 MET SELENOMETHIONINE MODRES 3FD0 MSE B 1 MET SELENOMETHIONINE MODRES 3FD0 MSE B 161 MET SELENOMETHIONINE MODRES 3FD0 MSE B 184 MET SELENOMETHIONINE MODRES 3FD0 LLP B 226 LYS MODRES 3FD0 MSE B 272 MET SELENOMETHIONINE MODRES 3FD0 MSE B 296 MET SELENOMETHIONINE MODRES 3FD0 MSE B 327 MET SELENOMETHIONINE MODRES 3FD0 MSE B 351 MET SELENOMETHIONINE MODRES 3FD0 MSE B 360 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 161 8 HET MSE A 184 8 HET LLP A 226 24 HET MSE A 272 8 HET MSE A 296 8 HET MSE A 327 8 HET MSE A 351 8 HET MSE A 360 8 HET MSE B 1 8 HET MSE B 161 8 HET MSE B 184 8 HET LLP B 226 24 HET MSE B 272 8 HET MSE B 296 8 HET MSE B 327 8 HET MSE B 351 8 HET MSE B 360 8 HET CA A 409 1 HET EDO A 410 4 HET EDO A 411 4 HET EDO A 412 4 HET EDO A 413 4 HET EDO A 414 4 HET EDO A 415 4 HET EDO A 416 4 HET EDO A 417 4 HET EDO A 418 4 HET EDO A 419 4 HET EDO A 420 4 HET EDO A 421 4 HET EDO A 422 4 HET EDO A 423 4 HET EDO A 424 4 HET EDO A 425 4 HET EDO A 426 4 HET PEG A 427 7 HET PEG A 428 7 HET PGE A 429 10 HET EDO B 409 4 HET EDO B 410 4 HET EDO B 411 4 HET EDO B 412 4 HET EDO B 413 4 HET EDO B 414 4 HET EDO B 415 4 HET EDO B 416 4 HET EDO B 417 4 HET EDO B 418 4 HET EDO B 419 4 HET PEG B 420 7 HET PGE B 421 10 HETNAM MSE SELENOMETHIONINE HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 CA CA 2+ FORMUL 4 EDO 28(C2 H6 O2) FORMUL 21 PEG 3(C4 H10 O3) FORMUL 23 PGE 2(C6 H14 O4) FORMUL 37 HOH *497(H2 O) HELIX 1 1 THR A 2 ASN A 40 1 39 HELIX 2 2 SER A 43 ASN A 48 5 6 HELIX 3 3 ASP A 57 LYS A 72 1 16 HELIX 4 4 SER A 84 LEU A 97 1 14 HELIX 5 5 THR A 113 GLY A 119 1 7 HELIX 6 6 LEU A 128 GLN A 132 5 5 HELIX 7 7 ASP A 147 ILE A 155 1 9 HELIX 8 8 THR A 177 ASN A 192 1 16 HELIX 9 9 GLU A 211 VAL A 215 5 5 HELIX 10 10 LLP A 226 GLY A 230 5 5 HELIX 11 11 ARG A 242 THR A 254 1 13 HELIX 12 12 ILE A 258 ALA A 262 5 5 HELIX 13 13 SER A 268 PHE A 300 1 33 HELIX 14 14 SER A 323 ALA A 337 1 15 HELIX 15 15 THR A 392 LEU A 408 1 17 HELIX 16 16 THR B 2 ASN B 40 1 39 HELIX 17 17 SER B 43 ASN B 48 5 6 HELIX 18 18 ASP B 57 LYS B 72 1 16 HELIX 19 19 SER B 84 LEU B 97 1 14 HELIX 20 20 THR B 113 GLY B 119 1 7 HELIX 21 21 LEU B 128 GLN B 132 5 5 HELIX 22 22 ASP B 147 ILE B 155 1 9 HELIX 23 23 THR B 177 ASN B 192 1 16 HELIX 24 24 GLU B 211 VAL B 215 5 5 HELIX 25 25 LLP B 226 GLY B 230 5 5 HELIX 26 26 ARG B 242 THR B 254 1 13 HELIX 27 27 ILE B 258 ALA B 262 5 5 HELIX 28 28 SER B 268 PHE B 300 1 33 HELIX 29 29 SER B 323 ALA B 337 1 15 HELIX 30 30 THR B 392 LEU B 408 1 17 SHEET 1 A 7 ALA A 75 ARG A 79 0 SHEET 2 A 7 GLY A 237 GLY A 241 -1 O ILE A 239 N LEU A 77 SHEET 3 A 7 ILE A 219 SER A 223 -1 N ILE A 220 O ALA A 240 SHEET 4 A 7 ILE A 196 ASP A 200 1 N VAL A 199 O ILE A 219 SHEET 5 A 7 THR A 159 GLN A 165 1 N ILE A 164 O ASP A 200 SHEET 6 A 7 GLU A 102 TYR A 105 1 N LEU A 104 O MSE A 161 SHEET 7 A 7 GLY A 134 ALA A 137 1 O GLY A 134 N LEU A 103 SHEET 1 B 6 GLU A 303 ASP A 305 0 SHEET 2 B 6 SER A 318 SER A 320 -1 O SER A 320 N GLU A 303 SHEET 3 B 6 GLN A 384 GLN A 388 -1 O LEU A 385 N VAL A 319 SHEET 4 B 6 THR A 374 PRO A 378 -1 N ASP A 376 O TYR A 386 SHEET 5 B 6 TYR A 354 ALA A 361 -1 N ALA A 361 O ALA A 375 SHEET 6 B 6 ALA A 349 MSE A 351 -1 N ALA A 349 O VAL A 358 SHEET 1 C 7 ALA B 75 ARG B 79 0 SHEET 2 C 7 GLY B 237 GLY B 241 -1 O ILE B 239 N LEU B 77 SHEET 3 C 7 ILE B 219 SER B 223 -1 N ILE B 220 O ALA B 240 SHEET 4 C 7 ILE B 196 ASP B 200 1 N VAL B 199 O ILE B 219 SHEET 5 C 7 THR B 159 GLN B 165 1 N ILE B 164 O ASP B 200 SHEET 6 C 7 GLU B 102 TYR B 105 1 N LEU B 104 O MSE B 161 SHEET 7 C 7 GLY B 134 ALA B 137 1 O GLY B 134 N LEU B 103 SHEET 1 D 5 GLU B 303 ASP B 305 0 SHEET 2 D 5 SER B 318 SER B 320 -1 O SER B 320 N GLU B 303 SHEET 3 D 5 GLN B 384 GLN B 388 -1 O LEU B 385 N VAL B 319 SHEET 4 D 5 THR B 374 PRO B 378 -1 N ASP B 376 O TYR B 386 SHEET 5 D 5 VAL B 358 ALA B 361 -1 N ALA B 361 O ALA B 375 LINK C MSE A 1 N THR A 2 1555 1555 1.33 LINK C LYS A 160 N MSE A 161 1555 1555 1.32 LINK C MSE A 161 N ILE A 162 1555 1555 1.32 LINK C GLU A 183 N MSE A 184 1555 1555 1.32 LINK C MSE A 184 N VAL A 185 1555 1555 1.33 LINK C ILE A 225 N LLP A 226 1555 1555 1.33 LINK C LLP A 226 N ASN A 227 1555 1555 1.32 LINK C GLU A 271 N MSE A 272 1555 1555 1.33 LINK C MSE A 272 N TYR A 273 1555 1555 1.33 LINK C ALA A 295 N MSE A 296 1555 1555 1.33 LINK C MSE A 296 N LEU A 297 1555 1555 1.33 LINK C LYS A 326 N MSE A 327 1555 1555 1.32 LINK C MSE A 327 N ILE A 328 1555 1555 1.32 LINK C TYR A 350 N MSE A 351 1555 1555 1.32 LINK C MSE A 351 N PRO A 352 1555 1555 1.34 LINK C ILE A 359 N MSE A 360 1555 1555 1.33 LINK C MSE A 360 N ALA A 361 1555 1555 1.33 LINK C MSE B 1 N THR B 2 1555 1555 1.34 LINK C LYS B 160 N MSE B 161 1555 1555 1.32 LINK C MSE B 161 N ILE B 162 1555 1555 1.32 LINK C GLU B 183 N MSE B 184 1555 1555 1.33 LINK C MSE B 184 N VAL B 185 1555 1555 1.33 LINK C ILE B 225 N LLP B 226 1555 1555 1.33 LINK C LLP B 226 N ASN B 227 1555 1555 1.33 LINK C GLU B 271 N MSE B 272 1555 1555 1.33 LINK C MSE B 272 N TYR B 273 1555 1555 1.31 LINK C ALA B 295 N MSE B 296 1555 1555 1.33 LINK C MSE B 296 N LEU B 297 1555 1555 1.32 LINK C LYS B 326 N MSE B 327 1555 1555 1.32 LINK C MSE B 327 N ILE B 328 1555 1555 1.32 LINK C TYR B 350 N MSE B 351 1555 1555 1.32 LINK C MSE B 351 N PRO B 352 1555 1555 1.34 LINK C ILE B 359 N MSE B 360 1555 1555 1.33 LINK C MSE B 360 N ALA B 361 1555 1555 1.33 LINK OD1 ASN A 190 CA CA A 409 1555 1555 2.33 LINK CA CA A 409 O HOH A 460 1555 1555 2.51 LINK CA CA A 409 O HOH A 461 1555 1555 2.32 LINK CA CA A 409 O HOH A 462 1555 1555 2.45 LINK CA CA A 409 O HOH A 463 1555 1555 2.45 LINK CA CA A 409 O HOH A 464 1555 1555 2.53 LINK CA CA A 409 O HOH A 465 1555 1555 2.56 CISPEP 1 ASP A 305 PRO A 306 0 1.06 CISPEP 2 GLU A 381 PRO A 382 0 0.92 CISPEP 3 ASP B 305 PRO B 306 0 -0.50 CISPEP 4 GLU B 381 PRO B 382 0 1.89 SITE 1 AC1 7 ASN A 190 HOH A 460 HOH A 461 HOH A 462 SITE 2 AC1 7 HOH A 463 HOH A 464 HOH A 465 SITE 1 AC2 5 ARG A 8 GLU A 12 GLU A 24 GLU A 27 SITE 2 AC2 5 LYS A 397 SITE 1 AC3 5 GLY A 169 TYR A 170 ASP A 376 TYR A 386 SITE 2 AC3 5 GLN A 388 SITE 1 AC4 8 PHE A 94 PHE A 131 ARG A 252 HOH A 591 SITE 2 AC4 8 PHE B 94 PHE B 131 ARG B 252 HOH B 472 SITE 1 AC5 5 GLU A 145 ILE A 146 TYR A 148 LYS A 180 SITE 2 AC5 5 GLU A 183 SITE 1 AC6 7 SER A 152 LYS A 153 ILE A 155 EDO A 423 SITE 2 AC6 7 EDO A 424 HOH A 443 ASP B 56 SITE 1 AC7 7 PRO A 174 SER A 175 LYS A 311 THR A 313 SITE 2 AC7 7 HOH A 451 HOH A 579 HOH A 670 SITE 1 AC8 7 THR A 213 GLY A 216 ALA A 217 ARG A 242 SITE 2 AC8 7 HOH A 467 HOH A 500 HOH A 625 SITE 1 AC9 3 LYS A 72 GLU A 214 HOH A 500 SITE 1 BC1 6 LEU A 278 HIS A 281 VAL A 282 LEU A 391 SITE 2 BC1 6 HOH A 470 HOH A 659 SITE 1 BC2 5 PRO A 346 ILE A 347 ILE A 359 MSE A 360 SITE 2 BC2 5 HOH A 516 SITE 1 BC3 5 TYR A 170 VAL A 358 ASP A 376 GLY A 377 SITE 2 BC3 5 PRO A 378 SITE 1 BC4 3 LEU A 232 LYS A 234 GLN A 274 SITE 1 BC5 5 ASP A 44 ASN A 341 THR A 364 PHE A 365 SITE 2 BC5 5 HOH A 675 SITE 1 BC6 4 ILE A 155 SER A 156 EDO A 414 EDO A 424 SITE 1 BC7 7 SER A 152 ILE A 155 ILE A 191 EDO A 414 SITE 2 BC7 7 EDO A 423 GLU B 58 ARG B 65 SITE 1 BC8 7 ASP A 247 GLY A 250 TYR A 251 ILE A 258 SITE 2 BC8 7 GLY A 259 ARG A 260 GLU A 261 SITE 1 BC9 1 ASP A 172 SITE 1 CC1 5 PHE A 28 ILE A 210 HOH A 453 HOH A 502 SITE 2 CC1 5 HOH A 514 SITE 1 CC2 7 GLU A 179 LYS A 182 ILE A 210 GLU A 214 SITE 2 CC2 7 VAL A 215 HOH A 454 HOH A 468 SITE 1 CC3 7 LYS A 234 TYR A 267 SER A 268 GLU A 271 SITE 2 CC3 7 HOH A 527 HOH A 646 TYR B 267 SITE 1 CC4 6 ARG B 8 GLU B 12 ASP B 23 GLU B 24 SITE 2 CC4 6 GLU B 27 LYS B 397 SITE 1 CC5 7 THR B 213 GLY B 216 ALA B 217 ARG B 242 SITE 2 CC5 7 HOH B 480 HOH B 490 HOH B 491 SITE 1 CC6 6 TYR B 170 ILE B 316 ASP B 376 TYR B 386 SITE 2 CC6 6 GLN B 388 EDO B 412 SITE 1 CC7 4 TYR B 111 GLY B 169 LLP B 226 EDO B 411 SITE 1 CC8 6 GLU B 145 ILE B 146 TYR B 148 LYS B 180 SITE 2 CC8 6 GLU B 183 HOH B 498 SITE 1 CC9 3 SER B 175 LYS B 311 HOH B 542 SITE 1 DC1 5 THR B 159 LYS B 160 ASN B 192 ASN B 194 SITE 2 DC1 5 HOH B 502 SITE 1 DC2 4 LYS B 32 GLU B 39 SER B 69 LYS B 72 SITE 1 DC3 5 ASP B 44 ALA B 362 THR B 364 PHE B 365 SITE 2 DC3 5 GLN B 367 SITE 1 DC4 3 LEU B 232 LYS B 234 GLN B 274 SITE 1 DC5 4 PRO B 346 ILE B 347 ILE B 359 MSE B 360 SITE 1 DC6 3 PHE B 28 ILE B 210 HOH B 600 SITE 1 DC7 7 LEU A 266 TYR A 267 LYS B 234 TYR B 267 SITE 2 DC7 7 SER B 268 GLU B 271 HOH B 428 CRYST1 131.890 131.890 116.740 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007582 0.004378 0.000000 0.00000 SCALE2 0.000000 0.008755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008566 0.00000 HETATM 1 N MSE A 1 77.933 88.789 -0.998 1.00 83.15 N HETATM 2 CA MSE A 1 77.678 87.514 -0.260 1.00 82.64 C HETATM 3 C MSE A 1 76.644 86.646 -0.925 1.00 80.94 C HETATM 4 O MSE A 1 75.576 87.120 -1.336 1.00 81.30 O HETATM 5 CB MSE A 1 77.131 87.789 1.135 1.00 83.36 C HETATM 6 CG MSE A 1 78.049 88.441 2.106 1.00 85.72 C HETATM 7 SE MSE A 1 77.209 88.139 3.838 0.75 92.15 SE HETATM 8 CE MSE A 1 75.338 88.478 3.338 1.00 88.19 C