HEADER TRANSFERASE 10-DEC-08 3FI3 TITLE CRYSTAL STRUCTURE OF JNK3 WITH INDAZOLE INHIBITOR, SR-3737 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 10; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 39-402; COMPND 5 SYNONYM: STRESS-ACTIVATED PROTEIN KINASE JNK3, C-JUN N-TERMINAL COMPND 6 KINASE 3, MAP KINASE P49 3F12; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JNK3, JNK3A, MAPK10, PRKM10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS JNK3, PROTEIN-INHIBITOR COMPLEX, ALTERNATIVE SPLICING, ATP-BINDING, KEYWDS 2 CHROMOSOMAL REARRANGEMENT, CYTOPLASM, EPILEPSY, KINASE, NUCLEOTIDE- KEYWDS 3 BINDING, PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 4 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.HABEL,D.DUCKETT,P.LOGRASSO REVDAT 3 06-SEP-23 3FI3 1 REMARK LINK REVDAT 2 23-JUN-09 3FI3 1 JRNL REVDAT 1 03-MAR-09 3FI3 0 JRNL AUTH T.KAMENECKA,J.HABEL,D.DUCKETT,W.CHEN,Y.Y.LING,B.FRACKOWIAK, JRNL AUTH 2 R.JIANG,Y.SHIN,X.SONG,P.LOGRASSO JRNL TITL STRUCTURE-ACTIVITY RELATIONSHIPS AND X-RAY STRUCTURES JRNL TITL 2 DESCRIBING THE SELECTIVITY OF AMINOPYRAZOLE INHIBITORS FOR JRNL TITL 3 C-JUN N-TERMINAL KINASE 3 (JNK3) OVER P38. JRNL REF J.BIOL.CHEM. V. 284 12853 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19261605 JRNL DOI 10.1074/JBC.M809430200 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 17506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1751 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9539 - 5.1627 1.00 1382 154 0.1634 0.2059 REMARK 3 2 5.1627 - 4.0984 1.00 1322 146 0.1410 0.1926 REMARK 3 3 4.0984 - 3.5806 1.00 1296 144 0.1378 0.2025 REMARK 3 4 3.5806 - 3.2533 0.99 1292 144 0.1588 0.2171 REMARK 3 5 3.2533 - 3.0201 0.99 1276 142 0.1887 0.2876 REMARK 3 6 3.0201 - 2.8421 0.99 1271 141 0.2149 0.3201 REMARK 3 7 2.8421 - 2.6998 0.98 1252 141 0.2139 0.3087 REMARK 3 8 2.6998 - 2.5822 0.98 1241 138 0.2034 0.3165 REMARK 3 9 2.5822 - 2.4828 0.96 1235 134 0.2142 0.3123 REMARK 3 10 2.4828 - 2.3972 0.93 1187 131 0.2050 0.2932 REMARK 3 11 2.3972 - 2.3222 0.90 1140 129 0.2198 0.3053 REMARK 3 12 2.3222 - 2.2558 0.81 1025 116 0.2328 0.3481 REMARK 3 13 2.2558 - 2.2000 0.65 836 91 0.2384 0.2674 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 51.50 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 NULL REMARK 3 ANGLE : 1.134 NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : 17.959 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 46:96) REMARK 3 ORIGIN FOR THE GROUP (A): -31.0968 -47.2855 -13.4060 REMARK 3 T TENSOR REMARK 3 T11: 0.1645 T22: 0.1784 REMARK 3 T33: 0.1942 T12: -0.0028 REMARK 3 T13: 0.0289 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 2.1371 L22: 1.9076 REMARK 3 L33: 1.4407 L12: -0.4066 REMARK 3 L13: 1.2572 L23: 1.1664 REMARK 3 S TENSOR REMARK 3 S11: -0.1113 S12: 0.2810 S13: -0.1907 REMARK 3 S21: -0.1555 S22: -0.0091 S23: 0.2714 REMARK 3 S31: 0.0040 S32: -0.0032 S33: 0.1180 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 97:119) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5753 -40.2276 -3.8431 REMARK 3 T TENSOR REMARK 3 T11: 0.1802 T22: 0.4326 REMARK 3 T33: 0.5630 T12: 0.0821 REMARK 3 T13: -0.0037 T23: -0.1419 REMARK 3 L TENSOR REMARK 3 L11: -4.9206 L22: 4.2384 REMARK 3 L33: 6.2484 L12: 4.2456 REMARK 3 L13: 2.3403 L23: 0.8077 REMARK 3 S TENSOR REMARK 3 S11: 0.3883 S12: 0.0125 S13: -0.8870 REMARK 3 S21: -0.0659 S22: 0.2012 S23: -1.4153 REMARK 3 S31: -0.6390 S32: 1.1701 S33: -0.4282 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 120:209) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2301 -31.2450 -4.6460 REMARK 3 T TENSOR REMARK 3 T11: 0.1610 T22: 0.2027 REMARK 3 T33: 0.2006 T12: 0.0396 REMARK 3 T13: 0.0218 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.1004 L22: 3.0159 REMARK 3 L33: 1.1180 L12: 0.8727 REMARK 3 L13: -0.0075 L23: 1.3754 REMARK 3 S TENSOR REMARK 3 S11: -0.0352 S12: 0.0071 S13: 0.0471 REMARK 3 S21: 0.1735 S22: 0.0697 S23: 0.3235 REMARK 3 S31: -0.0052 S32: 0.0713 S33: -0.0277 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 210:227) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3670 -26.0978 -8.7302 REMARK 3 T TENSOR REMARK 3 T11: 0.2971 T22: 0.5924 REMARK 3 T33: 0.6017 T12: 0.2298 REMARK 3 T13: -0.2250 T23: -0.1460 REMARK 3 L TENSOR REMARK 3 L11: 0.6502 L22: -0.0282 REMARK 3 L33: 0.1680 L12: -0.1123 REMARK 3 L13: 0.3016 L23: -0.1643 REMARK 3 S TENSOR REMARK 3 S11: -0.1792 S12: -0.0331 S13: -0.4455 REMARK 3 S21: 0.2830 S22: -0.0438 S23: -0.0521 REMARK 3 S31: 0.1117 S32: -0.0378 S33: 0.2007 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESID 228:265) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8373 -16.5230 -7.7919 REMARK 3 T TENSOR REMARK 3 T11: 0.1653 T22: 0.4474 REMARK 3 T33: 0.1664 T12: -0.0844 REMARK 3 T13: 0.0133 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.5243 L22: 0.7432 REMARK 3 L33: 3.8318 L12: 0.9607 REMARK 3 L13: 0.3482 L23: 1.0098 REMARK 3 S TENSOR REMARK 3 S11: -0.0602 S12: 0.1935 S13: -0.0668 REMARK 3 S21: -0.0464 S22: 0.2294 S23: -0.0989 REMARK 3 S31: -0.2185 S32: 1.1329 S33: -0.1270 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND RESID 266:298) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8521 -10.2253 -10.7390 REMARK 3 T TENSOR REMARK 3 T11: 0.2859 T22: 0.9359 REMARK 3 T33: 0.3211 T12: -0.2635 REMARK 3 T13: 0.1167 T23: -0.1892 REMARK 3 L TENSOR REMARK 3 L11: 2.2400 L22: 1.6153 REMARK 3 L33: 6.2398 L12: 1.3408 REMARK 3 L13: -1.7915 L23: 1.8523 REMARK 3 S TENSOR REMARK 3 S11: -0.0999 S12: 0.0389 S13: -0.5146 REMARK 3 S21: -0.5057 S22: 0.5566 S23: -0.4057 REMARK 3 S31: -0.6365 S32: 1.8952 S33: -0.4476 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND RESID 299:362) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2287 -6.5958 -3.8951 REMARK 3 T TENSOR REMARK 3 T11: 0.2690 T22: 0.1679 REMARK 3 T33: 0.2103 T12: -0.0828 REMARK 3 T13: -0.0209 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.4444 L22: 1.8947 REMARK 3 L33: 1.6829 L12: 0.5691 REMARK 3 L13: -0.3273 L23: 1.0841 REMARK 3 S TENSOR REMARK 3 S11: -0.2690 S12: -0.1190 S13: 0.3634 REMARK 3 S21: -0.1128 S22: 0.0926 S23: 0.2887 REMARK 3 S31: -0.5055 S32: 0.2104 S33: 0.1203 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND RESID 363:401) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3947 -42.6930 2.4926 REMARK 3 T TENSOR REMARK 3 T11: 0.3379 T22: 0.2971 REMARK 3 T33: 0.4530 T12: 0.1438 REMARK 3 T13: -0.1108 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.9603 L22: 4.3823 REMARK 3 L33: 2.2228 L12: 0.4801 REMARK 3 L13: -0.7411 L23: 3.0206 REMARK 3 S TENSOR REMARK 3 S11: 0.2882 S12: -0.4185 S13: -0.1231 REMARK 3 S21: 0.9807 S22: 0.1527 S23: -0.7001 REMARK 3 S31: 0.6070 S32: 0.4545 S33: -0.3985 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FI3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050618. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SIDE-SCATTERING CUBEROOT I-BEAM REMARK 200 BENT SINGLE CRYSTAL, ASYMETRIC REMARK 200 CUT 12.2 DEG REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17506 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36700 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX (AUTOMR) REMARK 200 STARTING MODEL: PDB ENTRY 1JNK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MG/ML JNK3 MIXED WITH 1MM AMP-PCP, REMARK 280 2MM MGCL2, 0.4MM ZWITTERGENT 3-14, 10% ETHYLENE. CRYSTALS GROWN REMARK 280 IN 0.2M NACL, 0.1M BIS-TRIS, 28-31% PEG 3350, PH 5.5, MICROBATCH, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.75950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.75950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.43100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.05250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.43100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.05250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.75950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.43100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.05250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 34.75950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.43100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 62.05250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 412 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 39 REMARK 465 SER A 40 REMARK 465 LYS A 41 REMARK 465 SER A 42 REMARK 465 LYS A 43 REMARK 465 VAL A 44 REMARK 465 GLY A 71 REMARK 465 SER A 72 REMARK 465 GLY A 73 REMARK 465 ALA A 74 REMARK 465 GLN A 75 REMARK 465 THR A 213 REMARK 465 ALA A 214 REMARK 465 GLY A 215 REMARK 465 THR A 216 REMARK 465 SER A 217 REMARK 465 PHE A 218 REMARK 465 MET A 219 REMARK 465 MET A 220 REMARK 465 THR A 221 REMARK 465 PRO A 222 REMARK 465 TYR A 223 REMARK 465 VAL A 224 REMARK 465 ASP A 364 REMARK 465 PRO A 365 REMARK 465 ALA A 366 REMARK 465 GLU A 367 REMARK 465 VAL A 368 REMARK 465 GLU A 369 REMARK 465 ALA A 370 REMARK 465 PRO A 371 REMARK 465 GLU A 402 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 225 CG1 CG2 REMARK 470 THR A 226 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 97 58.95 38.56 REMARK 500 GLN A 140 -46.27 -136.35 REMARK 500 ARG A 188 -14.48 74.75 REMARK 500 TYR A 268 6.45 -67.47 REMARK 500 PRO A 319 153.16 -49.20 REMARK 500 GLU A 382 -71.77 -60.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 OCY A 201 -10.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE JK2 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FI2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JNK3 WITH AMINO-PYRAZOLE INHIBITOR, SR-3451 DBREF 3FI3 A 39 402 UNP P53779 MK10_HUMAN 39 402 SEQRES 1 A 364 MET SER LYS SER LYS VAL ASP ASN GLN PHE TYR SER VAL SEQRES 2 A 364 GLU VAL GLY ASP SER THR PHE THR VAL LEU LYS ARG TYR SEQRES 3 A 364 GLN ASN LEU LYS PRO ILE GLY SER GLY ALA GLN GLY ILE SEQRES 4 A 364 VAL CYS ALA ALA TYR ASP ALA VAL LEU ASP ARG ASN VAL SEQRES 5 A 364 ALA ILE LYS LYS LEU SER ARG PRO PHE GLN ASN GLN THR SEQRES 6 A 364 HIS ALA LYS ARG ALA TYR ARG GLU LEU VAL LEU MET LYS SEQRES 7 A 364 OCY VAL ASN HIS LYS ASN ILE ILE SER LEU LEU ASN VAL SEQRES 8 A 364 PHE THR PRO GLN LYS THR LEU GLU GLU PHE GLN ASP VAL SEQRES 9 A 364 TYR LEU VAL MET GLU LEU MET ASP ALA ASN LEU OCY GLN SEQRES 10 A 364 VAL ILE GLN MET GLU LEU ASP HIS GLU ARG MET SER TYR SEQRES 11 A 364 LEU LEU TYR GLN MET LEU OCY GLY ILE LYS HIS LEU HIS SEQRES 12 A 364 SER ALA GLY ILE ILE HIS ARG ASP LEU LYS PRO SER ASN SEQRES 13 A 364 ILE VAL VAL LYS SER ASP OCY THR LEU LYS ILE LEU ASP SEQRES 14 A 364 PHE GLY LEU ALA ARG THR ALA GLY THR SER PHE MET MET SEQRES 15 A 364 THR PRO TYR VAL VAL THR ARG TYR TYR ARG ALA PRO GLU SEQRES 16 A 364 VAL ILE LEU GLY MET GLY TYR LYS GLU ASN VAL ASP ILE SEQRES 17 A 364 TRP SER VAL GLY CYS ILE MET GLY GLU MET VAL ARG HIS SEQRES 18 A 364 LYS ILE LEU PHE PRO GLY ARG ASP TYR ILE ASP GLN TRP SEQRES 19 A 364 ASN LYS VAL ILE GLU GLN LEU GLY THR PRO CYS PRO GLU SEQRES 20 A 364 PHE MET LYS LYS LEU GLN PRO THR VAL ARG ASN TYR VAL SEQRES 21 A 364 GLU ASN ARG PRO LYS TYR ALA GLY LEU THR PHE PRO LYS SEQRES 22 A 364 LEU PHE PRO ASP SER LEU PHE PRO ALA ASP SER GLU HIS SEQRES 23 A 364 ASN LYS LEU LYS ALA SER GLN ALA ARG ASP LEU LEU SER SEQRES 24 A 364 LYS MET LEU VAL ILE ASP PRO ALA LYS ARG ILE SER VAL SEQRES 25 A 364 ASP ASP ALA LEU GLN HIS PRO TYR ILE ASN VAL TRP TYR SEQRES 26 A 364 ASP PRO ALA GLU VAL GLU ALA PRO PRO PRO GLN ILE TYR SEQRES 27 A 364 ASP LYS GLN LEU ASP GLU ARG GLU HIS THR ILE GLU GLU SEQRES 28 A 364 TRP LYS GLU LEU ILE TYR LYS GLU VAL MET ASN SER GLU MODRES 3FI3 OCY A 117 CYS HYDROXYETHYLCYSTEINE MODRES 3FI3 OCY A 154 CYS HYDROXYETHYLCYSTEINE MODRES 3FI3 OCY A 175 CYS HYDROXYETHYLCYSTEINE MODRES 3FI3 OCY A 201 CYS HYDROXYETHYLCYSTEINE HET OCY A 117 9 HET OCY A 154 9 HET OCY A 175 9 HET OCY A 201 9 HET JK2 A 600 38 HET EDO A 601 4 HET EDO A 602 4 HETNAM OCY HYDROXYETHYLCYSTEINE HETNAM JK2 3-{5-[(2-FLUOROPHENYL)AMINO]-1H-INDAZOL-1-YL}-N-(3,4,5- HETNAM 2 JK2 TRIMETHOXYPHENYL)BENZAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 OCY 4(C5 H11 N O3 S) FORMUL 2 JK2 C29 H25 F N4 O4 FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *148(H2 O) HELIX 1 1 ASN A 101 MET A 115 1 15 HELIX 2 2 LEU A 153 GLN A 158 1 6 HELIX 3 3 ASP A 162 ALA A 183 1 22 HELIX 4 4 LYS A 191 SER A 193 5 3 HELIX 5 5 ALA A 231 LEU A 236 1 6 HELIX 6 6 ASN A 243 HIS A 259 1 17 HELIX 7 7 ILE A 269 GLY A 280 1 12 HELIX 8 8 CYS A 283 LYS A 288 1 6 HELIX 9 9 GLN A 291 ASN A 300 1 10 HELIX 10 10 THR A 308 PHE A 313 1 6 HELIX 11 11 PRO A 314 PHE A 318 5 5 HELIX 12 12 SER A 322 LEU A 340 1 19 HELIX 13 13 SER A 349 HIS A 356 1 8 HELIX 14 14 ILE A 359 TYR A 363 5 5 HELIX 15 15 ASP A 377 ASP A 381 5 5 HELIX 16 16 THR A 386 ASN A 400 1 15 SHEET 1 A 2 PHE A 48 VAL A 53 0 SHEET 2 A 2 SER A 56 LEU A 61 -1 O SER A 56 N VAL A 53 SHEET 1 B 5 TYR A 64 PRO A 69 0 SHEET 2 B 5 ILE A 77 ASP A 83 -1 O ALA A 80 N LYS A 68 SHEET 3 B 5 ARG A 88 SER A 96 -1 O ARG A 88 N ASP A 83 SHEET 4 B 5 ASP A 141 GLU A 147 -1 O VAL A 142 N LEU A 95 SHEET 5 B 5 ASN A 128 PHE A 130 -1 N PHE A 130 O TYR A 143 SHEET 1 C 3 ALA A 151 ASN A 152 0 SHEET 2 C 3 ILE A 195 VAL A 197 -1 O VAL A 197 N ALA A 151 SHEET 3 C 3 LEU A 203 ILE A 205 -1 O LYS A 204 N VAL A 196 LINK C LYS A 116 N OCY A 117 1555 1555 1.33 LINK C OCY A 117 N VAL A 118 1555 1555 1.33 LINK C LEU A 153 N OCY A 154 1555 1555 1.33 LINK C OCY A 154 N GLN A 155 1555 1555 1.33 LINK C LEU A 174 N OCY A 175 1555 1555 1.34 LINK C OCY A 175 N GLY A 176 1555 1555 1.33 LINK C ASP A 200 N OCY A 201 1555 1555 1.32 LINK C OCY A 201 N THR A 202 1555 1555 1.35 SITE 1 AC1 17 LYS A 68 ILE A 70 ALA A 91 LYS A 93 SITE 2 AC1 17 ILE A 124 LEU A 144 MET A 146 GLU A 147 SITE 3 AC1 17 LEU A 148 MET A 149 ASP A 150 ALA A 151 SITE 4 AC1 17 ASN A 152 GLN A 155 LEU A 206 HOH A 412 SITE 5 AC1 17 EDO A 602 SITE 1 AC2 2 PRO A 310 ASP A 315 SITE 1 AC3 6 ASN A 66 LYS A 68 ALA A 80 ALA A 81 SITE 2 AC3 6 ASN A 89 JK2 A 600 CRYST1 82.862 124.105 69.519 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012068 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008058 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014385 0.00000