HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-DEC-08 3FMB TITLE CRYSTAL STRUCTURE OF DIMERIC PROTEIN OF UNKNOWN FUNCTION AND TITLE 2 FERREDOXIN-LIKE FOLD (YP_212648.1) FROM BACTEROIDES FRAGILIS NCTC TITLE 3 9343 AT 1.85 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIMERIC PROTEIN OF UNKNOWN FUNCTION AND FERREDOXIN-LIKE COMPND 3 FOLD; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 272559; SOURCE 4 STRAIN: NCTC 9343; SOURCE 5 ATCC: 25285; SOURCE 6 GENE: BF3034, YP_212648.1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS YP_212648.1, STRESS RESPONSIVE A/B BARREL DOMAIN, DIMERIC PROTEIN OF KEYWDS 2 UNKNOWN FUNCTION AND FERREDOXIN-LIKE FOLD, STRUCTURAL GENOMICS, KEYWDS 3 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 4 INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3FMB 1 REMARK SEQADV REVDAT 4 24-JUL-19 3FMB 1 REMARK LINK REVDAT 3 01-NOV-17 3FMB 1 REMARK REVDAT 2 13-JUL-11 3FMB 1 VERSN REVDAT 1 27-JAN-09 3FMB 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF DIMERIC PROTEIN OF UNKNOWN FUNCTION AND JRNL TITL 2 FERREDOXIN-LIKE FOLD (YP_212648.1) FROM BACTEROIDES FRAGILIS JRNL TITL 3 NCTC 9343 AT 1.85 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 31830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1612 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2135 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1646 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 294 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 29.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : 0.58000 REMARK 3 B33 (A**2) : -0.87000 REMARK 3 B12 (A**2) : 0.29000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.322 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1780 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1212 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2407 ; 1.468 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2975 ; 0.971 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 220 ; 5.545 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;31.697 ;25.122 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 322 ;13.028 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;14.104 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 264 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1975 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 346 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 335 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1251 ; 0.199 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 845 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 878 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 220 ; 0.167 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.148 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 21 ; 0.185 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1336 ; 2.080 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 426 ; 0.508 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1756 ; 2.440 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 796 ; 4.731 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 651 ; 6.465 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A -3 A 99 6 REMARK 3 1 B -3 B 99 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 1349 ; 0.350 ; 5.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1349 ; 1.760 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0378 21.6418 10.0772 REMARK 3 T TENSOR REMARK 3 T11: -0.0857 T22: -0.0544 REMARK 3 T33: -0.0607 T12: -0.0219 REMARK 3 T13: 0.0425 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.2973 L22: 0.9893 REMARK 3 L33: 2.8366 L12: 0.6849 REMARK 3 L13: 0.3393 L23: 0.2516 REMARK 3 S TENSOR REMARK 3 S11: 0.0283 S12: -0.1668 S13: -0.0698 REMARK 3 S21: 0.1071 S22: -0.0585 S23: 0.0316 REMARK 3 S31: 0.3404 S32: 0.0372 S33: 0.0302 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0056 26.7741 -7.4316 REMARK 3 T TENSOR REMARK 3 T11: -0.1463 T22: 0.0068 REMARK 3 T33: -0.0651 T12: -0.0221 REMARK 3 T13: 0.0235 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 2.4509 L22: 0.7210 REMARK 3 L33: 2.6405 L12: -0.2267 REMARK 3 L13: -0.0289 L23: 0.2633 REMARK 3 S TENSOR REMARK 3 S11: -0.0055 S12: 0.3139 S13: 0.0295 REMARK 3 S21: -0.0470 S22: -0.0264 S23: 0.0074 REMARK 3 S31: 0.0470 S32: 0.0581 S33: 0.0320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. SULFATE REMARK 3 (SO4) IONS FROM CRYSTALLIZATION CONDITION AND ETHYLENE GLYCOL REMARK 3 (EDO) FROM CRYO SOLUTION WERE MODELED. REMARK 4 REMARK 4 3FMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050765. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97867 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31933 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 29.399 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXCD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.2M (NH4)2SO4, 20.0% PEG REMARK 280 3350, NO BUFFER PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.67333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 155.34667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.51000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 194.18333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.83667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.67333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 155.34667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 194.18333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 116.51000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.83667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 ASP B -15 REMARK 465 LYS B -14 REMARK 465 ILE B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A -3 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B -3 CG CD1 CD2 CE1 CE2 CZ OH REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 104 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 391626 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. DBREF 3FMB A 1 99 UNP Q5LAZ3 Q5LAZ3_BACFN 1 99 DBREF 3FMB B 1 99 UNP Q5LAZ3 Q5LAZ3_BACFN 1 99 SEQADV 3FMB MSE A -18 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLY A -17 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB SER A -16 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB ASP A -15 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB LYS A -14 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB ILE A -13 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS A -12 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS A -11 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS A -10 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS A -9 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS A -8 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS A -7 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLU A -6 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB ASN A -5 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB LEU A -4 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB TYR A -3 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB PHE A -2 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLN A -1 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLY A 0 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB MSE B -18 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLY B -17 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB SER B -16 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB ASP B -15 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB LYS B -14 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB ILE B -13 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS B -12 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS B -11 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS B -10 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS B -9 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS B -8 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB HIS B -7 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLU B -6 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB ASN B -5 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB LEU B -4 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB TYR B -3 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB PHE B -2 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLN B -1 UNP Q5LAZ3 EXPRESSION TAG SEQADV 3FMB GLY B 0 UNP Q5LAZ3 EXPRESSION TAG SEQRES 1 A 118 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 118 ASN LEU TYR PHE GLN GLY MSE VAL LYS HIS ILE VAL LEU SEQRES 3 A 118 PHE LYS LEU ARG ASP ASP VAL PRO VAL GLU GLU LYS LEU SEQRES 4 A 118 VAL VAL MSE ASN SER PHE LYS GLU ALA ILE GLU ALA LEU SEQRES 5 A 118 PRO ALA LYS ILE SER VAL ILE ARG LYS ILE GLU VAL GLY SEQRES 6 A 118 LEU ASN MSE ASN PRO GLY GLU THR TRP ASN ILE ALA LEU SEQRES 7 A 118 TYR SER GLU PHE ASP ASN LEU ASP ASP VAL LYS PHE TYR SEQRES 8 A 118 ALA THR HIS PRO GLU HIS VAL ALA ALA GLY LYS ILE LEU SEQRES 9 A 118 ALA GLU THR LYS GLU SER ARG ALA CYS VAL ASP TYR GLU SEQRES 10 A 118 PHE SEQRES 1 B 118 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 B 118 ASN LEU TYR PHE GLN GLY MSE VAL LYS HIS ILE VAL LEU SEQRES 3 B 118 PHE LYS LEU ARG ASP ASP VAL PRO VAL GLU GLU LYS LEU SEQRES 4 B 118 VAL VAL MSE ASN SER PHE LYS GLU ALA ILE GLU ALA LEU SEQRES 5 B 118 PRO ALA LYS ILE SER VAL ILE ARG LYS ILE GLU VAL GLY SEQRES 6 B 118 LEU ASN MSE ASN PRO GLY GLU THR TRP ASN ILE ALA LEU SEQRES 7 B 118 TYR SER GLU PHE ASP ASN LEU ASP ASP VAL LYS PHE TYR SEQRES 8 B 118 ALA THR HIS PRO GLU HIS VAL ALA ALA GLY LYS ILE LEU SEQRES 9 B 118 ALA GLU THR LYS GLU SER ARG ALA CYS VAL ASP TYR GLU SEQRES 10 B 118 PHE MODRES 3FMB MSE A 1 MET SELENOMETHIONINE MODRES 3FMB MSE A 23 MET SELENOMETHIONINE MODRES 3FMB MSE A 49 MET SELENOMETHIONINE MODRES 3FMB MSE B 1 MET SELENOMETHIONINE MODRES 3FMB MSE B 23 MET SELENOMETHIONINE MODRES 3FMB MSE B 49 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 23 8 HET MSE A 49 16 HET MSE B 1 8 HET MSE B 23 8 HET MSE B 49 16 HET SO4 A 100 5 HET EDO A 101 4 HET SO4 B 100 5 HET EDO B 101 4 HET EDO B 102 4 HET EDO B 103 4 HET EDO B 104 4 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 EDO 5(C2 H6 O2) FORMUL 10 HOH *294(H2 O) HELIX 1 1 PRO A 15 ALA A 32 1 18 HELIX 2 2 LEU A 33 LYS A 36 5 4 HELIX 3 3 ASN A 65 HIS A 75 1 11 HELIX 4 4 HIS A 75 ILE A 84 1 10 HELIX 5 5 PRO B 15 ALA B 32 1 18 HELIX 6 6 LEU B 33 LYS B 36 5 4 HELIX 7 7 ASN B 65 HIS B 75 1 11 HELIX 8 8 HIS B 75 ILE B 84 1 10 SHEET 1 A 4 LYS A 42 LEU A 47 0 SHEET 2 A 4 ILE A 57 PHE A 63 -1 O ALA A 58 N GLY A 46 SHEET 3 A 4 MSE A 1 LEU A 10 -1 N VAL A 6 O LEU A 59 SHEET 4 A 4 LYS A 89 PHE A 99 -1 O TYR A 97 N LYS A 3 SHEET 1 B 4 LYS B 42 LEU B 47 0 SHEET 2 B 4 ILE B 57 PHE B 63 -1 O ALA B 58 N GLY B 46 SHEET 3 B 4 MSE B 1 LEU B 10 -1 N VAL B 2 O PHE B 63 SHEET 4 B 4 LYS B 89 PHE B 99 -1 O TYR B 97 N LYS B 3 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N VAL A 2 1555 1555 1.33 LINK C VAL A 22 N MSE A 23 1555 1555 1.34 LINK C MSE A 23 N ASN A 24 1555 1555 1.33 LINK C ASN A 48 N AMSE A 49 1555 1555 1.32 LINK C ASN A 48 N BMSE A 49 1555 1555 1.33 LINK C AMSE A 49 N ASN A 50 1555 1555 1.34 LINK C BMSE A 49 N ASN A 50 1555 1555 1.33 LINK C GLY B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N VAL B 2 1555 1555 1.34 LINK C VAL B 22 N MSE B 23 1555 1555 1.34 LINK C MSE B 23 N ASN B 24 1555 1555 1.33 LINK C ASN B 48 N AMSE B 49 1555 1555 1.33 LINK C ASN B 48 N BMSE B 49 1555 1555 1.33 LINK C AMSE B 49 N ASN B 50 1555 1555 1.33 LINK C BMSE B 49 N ASN B 50 1555 1555 1.33 SITE 1 AC1 7 HIS A 4 TYR A 72 HIS A 78 ARG A 92 SITE 2 AC1 7 HOH A 127 HOH A 259 HOH B 172 SITE 1 AC2 7 ASN A 48 GLU A 53 TRP A 55 ASN A 56 SITE 2 AC2 7 HOH A 209 VAL B 16 GLU B 17 SITE 1 AC3 7 HIS B 4 TYR B 72 HIS B 78 ARG B 92 SITE 2 AC3 7 HOH B 109 HOH B 142 HOH B 282 SITE 1 AC4 8 LYS A 70 ALA A 73 HOH A 109 HOH A 300 SITE 2 AC4 8 ASN B 50 HOH B 157 HOH B 172 HOH B 223 SITE 1 AC5 3 MSE B 49 PRO B 51 EDO B 104 SITE 1 AC6 5 PRO A 76 ASN B 65 ASP B 68 HOH B 193 SITE 2 AC6 5 HOH B 295 SITE 1 AC7 4 LEU B 20 EDO B 102 HOH B 151 HOH B 233 CRYST1 72.310 72.310 233.020 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013829 0.007984 0.000000 0.00000 SCALE2 0.000000 0.015969 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004291 0.00000