HEADER TRANSFERASE 24-DEC-08 3FNC TITLE CRYSTAL STRUCTURE OF A PUTATIVE ACETYLTRANSFERASE FROM LISTERIA TITLE 2 INNOCUA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-160; COMPND 5 SYNONYM: PROTEIN LIN0611; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; SOURCE 3 ORGANISM_TAXID: 272626; SOURCE 4 STRAIN: CLIP11262; SOURCE 5 GENE: LIN0611; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS GNAT, RIMI, ACETYLTRANSFERASE, LISTERIA INNOCUA, STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CUFF,C.TESAR,L.FREEMAN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 30-OCT-24 3FNC 1 REMARK SEQADV LINK REVDAT 3 01-NOV-17 3FNC 1 REMARK REVDAT 2 13-JUL-11 3FNC 1 VERSN REVDAT 1 27-JAN-09 3FNC 0 JRNL AUTH M.E.CUFF,C.TESAR,L.FREEMAN,A.JOACHIMIAK JRNL TITL THE STRUCTURE OF A PUTATIVE ACETYLTRANSFERASE FROM LISTERIA JRNL TITL 2 INNOCUA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 35701 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1781 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2097 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2615 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 320 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 21.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.86000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : 0.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.13000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.114 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.516 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2812 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3806 ; 1.340 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 336 ; 5.840 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;34.867 ;24.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 456 ;14.413 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;17.109 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 410 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2195 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1654 ; 0.807 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2691 ; 1.505 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1158 ; 2.417 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1115 ; 4.034 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -3 A 160 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5362 25.3266 46.1231 REMARK 3 T TENSOR REMARK 3 T11: 0.0202 T22: 0.0291 REMARK 3 T33: 0.0052 T12: 0.0023 REMARK 3 T13: -0.0036 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.4007 L22: 1.3501 REMARK 3 L33: 1.1161 L12: 0.0555 REMARK 3 L13: -0.2768 L23: 0.2714 REMARK 3 S TENSOR REMARK 3 S11: 0.0653 S12: 0.1604 S13: -0.0588 REMARK 3 S21: -0.0416 S22: -0.0604 S23: -0.0126 REMARK 3 S31: -0.0070 S32: -0.0766 S33: -0.0049 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -3 B 160 REMARK 3 ORIGIN FOR THE GROUP (A): 18.6082 36.0449 66.4528 REMARK 3 T TENSOR REMARK 3 T11: 0.0357 T22: 0.0384 REMARK 3 T33: 0.0094 T12: -0.0066 REMARK 3 T13: 0.0030 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 2.0035 L22: 0.9895 REMARK 3 L33: 0.5436 L12: -0.2508 REMARK 3 L13: 0.1733 L23: -0.1125 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: -0.1944 S13: 0.0334 REMARK 3 S21: 0.0067 S22: -0.0551 S23: 0.0457 REMARK 3 S31: 0.0255 S32: -0.0230 S33: -0.0015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3FNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050802. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97962, 0.97945 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35751 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.5340 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.26800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE, DM 6.0, HKL-3000, SHELXD, SOLVE, RESOLVE, REMARK 200 CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M NA MALONATE, DMSO, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.51500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS REMARK 300 UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 159 26.87 -140.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 167 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI B 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 164 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC60777.1 RELATED DB: TARGETDB DBREF 3FNC A 1 160 UNP Q92E50 Q92E50_LISIN 1 160 DBREF 3FNC B 1 160 UNP Q92E50 Q92E50_LISIN 1 160 SEQADV 3FNC SER A -2 UNP Q92E50 EXPRESSION TAG SEQADV 3FNC ASN A -1 UNP Q92E50 EXPRESSION TAG SEQADV 3FNC ALA A 0 UNP Q92E50 EXPRESSION TAG SEQADV 3FNC SER B -2 UNP Q92E50 EXPRESSION TAG SEQADV 3FNC ASN B -1 UNP Q92E50 EXPRESSION TAG SEQADV 3FNC ALA B 0 UNP Q92E50 EXPRESSION TAG SEQRES 1 A 163 SER ASN ALA MSE ASP PHE HIS ILE ARG LYS ALA THR ASN SEQRES 2 A 163 SER ASP ALA GLU ALA ILE GLN HIS VAL ALA THR THR SER SEQRES 3 A 163 TRP HIS HIS THR TYR GLN ASP LEU ILE PRO SER ASP VAL SEQRES 4 A 163 GLN ASP ASP PHE LEU LYS ARG PHE TYR ASN VAL GLU THR SEQRES 5 A 163 LEU HIS ASN ARG ILE SER ALA THR PRO PHE ALA VAL LEU SEQRES 6 A 163 GLU GLN ALA ASP LYS VAL ILE GLY PHE ALA ASN PHE ILE SEQRES 7 A 163 GLU LEU GLU LYS GLY LYS SER GLU LEU ALA ALA PHE TYR SEQRES 8 A 163 LEU LEU PRO GLU VAL THR GLN ARG GLY LEU GLY THR GLU SEQRES 9 A 163 LEU LEU GLU VAL GLY MSE THR LEU PHE HIS VAL PRO LEU SEQRES 10 A 163 PRO MSE PHE VAL ASN VAL GLU LYS GLY ASN GLU THR ALA SEQRES 11 A 163 ILE HIS PHE TYR LYS ALA LYS GLY PHE VAL GLN VAL GLU SEQRES 12 A 163 GLU PHE THR GLU ASP PHE TYR GLY TYR PRO LEU GLU THR SEQRES 13 A 163 ILE ARG PHE ASN LEU ASN HIS SEQRES 1 B 163 SER ASN ALA MSE ASP PHE HIS ILE ARG LYS ALA THR ASN SEQRES 2 B 163 SER ASP ALA GLU ALA ILE GLN HIS VAL ALA THR THR SER SEQRES 3 B 163 TRP HIS HIS THR TYR GLN ASP LEU ILE PRO SER ASP VAL SEQRES 4 B 163 GLN ASP ASP PHE LEU LYS ARG PHE TYR ASN VAL GLU THR SEQRES 5 B 163 LEU HIS ASN ARG ILE SER ALA THR PRO PHE ALA VAL LEU SEQRES 6 B 163 GLU GLN ALA ASP LYS VAL ILE GLY PHE ALA ASN PHE ILE SEQRES 7 B 163 GLU LEU GLU LYS GLY LYS SER GLU LEU ALA ALA PHE TYR SEQRES 8 B 163 LEU LEU PRO GLU VAL THR GLN ARG GLY LEU GLY THR GLU SEQRES 9 B 163 LEU LEU GLU VAL GLY MSE THR LEU PHE HIS VAL PRO LEU SEQRES 10 B 163 PRO MSE PHE VAL ASN VAL GLU LYS GLY ASN GLU THR ALA SEQRES 11 B 163 ILE HIS PHE TYR LYS ALA LYS GLY PHE VAL GLN VAL GLU SEQRES 12 B 163 GLU PHE THR GLU ASP PHE TYR GLY TYR PRO LEU GLU THR SEQRES 13 B 163 ILE ARG PHE ASN LEU ASN HIS MODRES 3FNC MSE A 1 MET SELENOMETHIONINE MODRES 3FNC MSE A 107 MET SELENOMETHIONINE MODRES 3FNC MSE A 116 MET SELENOMETHIONINE MODRES 3FNC MSE B 1 MET SELENOMETHIONINE MODRES 3FNC MSE B 107 MET SELENOMETHIONINE MODRES 3FNC MSE B 116 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 107 8 HET MSE A 116 8 HET MSE B 1 8 HET MSE B 107 8 HET MSE B 116 8 HET MLI A 161 7 HET MLI A 162 7 HET EDO A 163 4 HET EDO A 164 4 HET EDO A 165 4 HET EDO A 166 4 HET EDO A 167 4 HET EDO A 168 4 HET EDO B 161 4 HET MLI B 162 7 HET EDO B 163 4 HET EDO B 164 4 HETNAM MSE SELENOMETHIONINE HETNAM MLI MALONATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 MLI 3(C3 H2 O4 2-) FORMUL 5 EDO 9(C2 H6 O2) FORMUL 15 HOH *320(H2 O) HELIX 1 1 THR A 9 SER A 11 5 3 HELIX 2 2 ASP A 12 TYR A 28 1 17 HELIX 3 3 PRO A 33 TYR A 45 1 13 HELIX 4 4 ASN A 46 THR A 57 1 12 HELIX 5 5 PRO A 91 THR A 94 5 4 HELIX 6 6 GLY A 97 PHE A 110 1 14 HELIX 7 7 ASN A 124 LYS A 134 1 11 HELIX 8 8 THR B 9 SER B 11 5 3 HELIX 9 9 ASP B 12 TYR B 28 1 17 HELIX 10 10 PRO B 33 TYR B 45 1 13 HELIX 11 11 ASN B 46 THR B 57 1 12 HELIX 12 12 PRO B 91 THR B 94 5 4 HELIX 13 13 GLY B 97 HIS B 111 1 15 HELIX 14 14 ASN B 124 LYS B 134 1 11 SHEET 1 A 7 PHE A 3 LYS A 7 0 SHEET 2 A 7 PHE A 59 GLN A 64 -1 O GLU A 63 N HIS A 4 SHEET 3 A 7 LYS A 67 GLU A 78 -1 O ILE A 69 N LEU A 62 SHEET 4 A 7 LYS A 81 LEU A 89 -1 O GLU A 83 N ILE A 75 SHEET 5 A 7 MSE A 116 GLU A 121 1 O PHE A 117 N LEU A 84 SHEET 6 A 7 TYR A 149 LEU A 158 -1 O ILE A 154 N VAL A 120 SHEET 7 A 7 VAL A 137 PHE A 146 -1 N VAL A 139 O ARG A 155 SHEET 1 B 7 PHE B 3 LYS B 7 0 SHEET 2 B 7 PHE B 59 GLN B 64 -1 O VAL B 61 N ARG B 6 SHEET 3 B 7 LYS B 67 LEU B 77 -1 O ALA B 72 N ALA B 60 SHEET 4 B 7 LYS B 81 LEU B 89 -1 O GLU B 83 N ILE B 75 SHEET 5 B 7 MSE B 116 GLU B 121 1 O PHE B 117 N LEU B 84 SHEET 6 B 7 TYR B 149 LEU B 158 -1 O ILE B 154 N VAL B 120 SHEET 7 B 7 VAL B 137 PHE B 146 -1 N PHE B 146 O TYR B 149 LINK C MSE A 1 N ASP A 2 1555 1555 1.33 LINK C GLY A 106 N MSE A 107 1555 1555 1.32 LINK C MSE A 107 N THR A 108 1555 1555 1.33 LINK C PRO A 115 N MSE A 116 1555 1555 1.32 LINK C MSE A 116 N PHE A 117 1555 1555 1.34 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ASP B 2 1555 1555 1.33 LINK C GLY B 106 N MSE B 107 1555 1555 1.33 LINK C MSE B 107 N THR B 108 1555 1555 1.32 LINK C PRO B 115 N MSE B 116 1555 1555 1.33 LINK C MSE B 116 N PHE B 117 1555 1555 1.32 CISPEP 1 LEU A 114 PRO A 115 0 9.29 CISPEP 2 LEU B 114 PRO B 115 0 2.53 SITE 1 AC1 7 PHE A 40 TYR A 45 ALA A 85 TYR A 88 SITE 2 AC1 7 EDO A 166 EDO A 167 HOH A 360 SITE 1 AC2 11 GLN A 95 ARG A 96 GLY A 97 LEU A 98 SITE 2 AC2 11 GLY A 99 THR A 100 PHE A 130 EDO A 165 SITE 3 AC2 11 HOH A 179 HOH A 279 HOH A 298 SITE 1 AC3 7 LYS A 7 ALA A 8 ILE A 54 THR A 57 SITE 2 AC3 7 PRO A 58 PHE A 59 PHE A 110 SITE 1 AC4 4 PRO A 91 GLU A 92 THR A 94 ARG A 96 SITE 1 AC5 5 LEU A 89 THR A 94 GLN A 95 THR A 126 SITE 2 AC5 5 MLI A 162 SITE 1 AC6 7 TYR A 28 ASN A 119 GLU A 121 GLU A 144 SITE 2 AC6 7 MLI A 161 EDO A 167 HOH A 411 SITE 1 AC7 8 LEU A 84 ALA A 85 ALA A 86 PHE A 87 SITE 2 AC7 8 ASN A 119 MLI A 161 EDO A 166 HOH A 212 SITE 1 AC8 5 ASP A 38 LEU A 41 LYS A 42 HOH A 222 SITE 2 AC8 5 HOH A 233 SITE 1 AC9 7 LEU B 84 ALA B 85 ALA B 86 PHE B 87 SITE 2 AC9 7 TYR B 88 ASN B 119 HOH B 188 SITE 1 BC1 9 GLN B 95 ARG B 96 GLY B 97 LEU B 98 SITE 2 BC1 9 GLY B 99 THR B 100 PHE B 130 EDO B 163 SITE 3 BC1 9 HOH B 217 SITE 1 BC2 6 LEU B 89 THR B 94 GLN B 95 THR B 126 SITE 2 BC2 6 PHE B 130 MLI B 162 SITE 1 BC3 4 PRO B 91 GLU B 92 THR B 94 ARG B 96 CRYST1 39.974 61.030 75.132 90.00 92.08 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025016 0.000000 0.000907 0.00000 SCALE2 0.000000 0.016385 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013319 0.00000 HETATM 1 N MSE A 1 -16.011 15.048 32.823 1.00 31.20 N HETATM 2 CA MSE A 1 -16.435 14.661 34.203 1.00 30.96 C HETATM 3 C MSE A 1 -16.624 15.883 35.094 1.00 30.06 C HETATM 4 O MSE A 1 -15.928 16.886 34.928 1.00 30.72 O HETATM 5 CB MSE A 1 -15.404 13.731 34.831 1.00 31.29 C HETATM 6 CG MSE A 1 -15.517 12.282 34.379 1.00 32.57 C HETATM 7 SE MSE A 1 -14.701 11.079 35.686 0.80 35.95 SE HETATM 8 CE MSE A 1 -15.899 11.460 37.196 1.00 35.86 C