HEADER ELECTRON TRANSPORT 02-JAN-09 3FOU TITLE LOW PH STRUCTURE OF THE RIESKE PROTEIN FROM THERMUS THERMOPHILUS AT TITLE 2 2.1 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUINOL-CYTOCHROME C REDUCTASE, RIESKE IRON-SULFUR SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TTHA1931; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS RIESKE PROTEIN, PR, [2FE-2S], ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR L.M.HUNSICKER-WANG,A.B.TAYLOR REVDAT 3 06-SEP-23 3FOU 1 REMARK REVDAT 2 13-JUL-11 3FOU 1 VERSN REVDAT 1 20-OCT-09 3FOU 0 JRNL AUTH M.E.KONKLE,S.K.MUELLNER,A.L.SCHWANDER,M.M.DICUS,R.POKHREL, JRNL AUTH 2 R.D.BRITT,A.B.TAYLOR,L.M.HUNSICKER-WANG JRNL TITL EFFECTS OF PH ON THE RIESKE PROTEIN FROM THERMUS JRNL TITL 2 THERMOPHILUS: A SPECTROSCOPIC AND STRUCTURAL ANALYSIS JRNL REF BIOCHEMISTRY V. 48 9848 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19772300 JRNL DOI 10.1021/BI901126U REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22217 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1205 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1591 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2312 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 114 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : -0.48000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.190 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.176 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.134 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.985 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2412 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3300 ; 1.862 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 310 ; 6.876 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;35.266 ;25.106 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 363 ;16.693 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;14.699 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 368 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1873 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1075 ; 0.219 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1579 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 162 ; 0.184 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 6 ; 0.436 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.324 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.330 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.072 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1615 ; 1.079 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2548 ; 1.759 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 883 ; 2.623 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 748 ; 4.166 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FOU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.21 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL MULTILAYER OPTICS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23456 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 58.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08800 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.52900 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PROTEIN A OF 1NYK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, NA CACODYLATE, CALCIUM REMARK 280 ACETATE, PR(ACETATE)3, PH 6.21, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 56.57600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.25600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.57600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.25600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 PR PR A 208 O HOH A 233 1.45 REMARK 500 PR PR A 206 O HOH A 210 1.82 REMARK 500 PR PR A 206 O ACT A 213 1.83 REMARK 500 OE1 GLU A 111 O ACT A 213 2.04 REMARK 500 OE1 GLU A 111 PR PR A 206 2.09 REMARK 500 PR PR B 210 O HOH B 240 2.09 REMARK 500 PR PR A 208 O HOH A 211 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 234 O HOH B 34 3444 2.08 REMARK 500 OE2 GLU B 111 O HOH A 233 3454 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 95 48.15 -80.31 REMARK 500 HIS A 134 -73.46 -78.85 REMARK 500 LEU A 194 46.87 -91.93 REMARK 500 LYS B 95 49.14 -81.74 REMARK 500 HIS B 134 -79.10 -74.03 REMARK 500 HIS B 154 17.46 -141.16 REMARK 500 HIS B 162 53.66 -104.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 204 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 132 SG REMARK 620 2 FES A 204 S1 110.6 REMARK 620 3 FES A 204 S2 110.6 104.3 REMARK 620 4 CYS A 151 SG 109.3 111.3 110.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 204 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 134 ND1 REMARK 620 2 FES A 204 S1 112.9 REMARK 620 3 FES A 204 S2 113.9 103.4 REMARK 620 4 HIS A 154 ND1 94.3 119.2 113.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 211 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 73 OE1 REMARK 620 2 GLU B 73 OE2 47.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 204 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 132 SG REMARK 620 2 FES B 204 S1 111.3 REMARK 620 3 FES B 204 S2 107.5 103.3 REMARK 620 4 CYS B 151 SG 108.0 117.2 109.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 204 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 134 ND1 REMARK 620 2 FES B 204 S1 112.8 REMARK 620 3 FES B 204 S2 114.2 107.6 REMARK 620 4 HIS B 154 ND1 89.6 115.8 116.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR B 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 211 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NYK RELATED DB: PDB REMARK 900 HIGH PH STRUCTURE OF THE RIESKE PROTEIN FROM THERMUS THERMOPHILUS REMARK 900 AT 1.3A DBREF 3FOU A 46 201 UNP Q5SGZ9 Q5SGZ9_THET8 46 201 DBREF 3FOU B 46 201 UNP Q5SGZ9 Q5SGZ9_THET8 46 201 SEQRES 1 A 156 THR PRO GLU LYS GLU PRO LEU LYS PRO GLY ASP ILE LEU SEQRES 2 A 156 VAL TYR ALA GLN GLY GLY GLY GLU PRO LYS PRO ILE ARG SEQRES 3 A 156 LEU GLU GLU LEU LYS PRO GLY ASP PRO PHE VAL LEU ALA SEQRES 4 A 156 TYR PRO MET ASP PRO LYS THR LYS VAL VAL LYS SER GLY SEQRES 5 A 156 GLU ALA LYS ASN THR LEU LEU VAL ALA ARG PHE ASP PRO SEQRES 6 A 156 GLU GLU LEU ALA PRO GLU VAL ALA GLN HIS ALA ALA GLU SEQRES 7 A 156 GLY VAL VAL ALA TYR SER ALA VAL CYS THR HIS LEU GLY SEQRES 8 A 156 CYS ILE VAL SER GLN TRP VAL ALA ASP GLU GLU ALA ALA SEQRES 9 A 156 LEU CYS PRO CYS HIS GLY GLY VAL TYR ASP LEU ARG HIS SEQRES 10 A 156 GLY ALA GLN VAL ILE ALA GLY PRO PRO PRO ARG PRO VAL SEQRES 11 A 156 PRO GLN LEU PRO VAL ARG VAL GLU ASP GLY VAL LEU VAL SEQRES 12 A 156 ALA ALA GLY GLU PHE LEU GLY PRO VAL GLY VAL GLN ALA SEQRES 1 B 156 THR PRO GLU LYS GLU PRO LEU LYS PRO GLY ASP ILE LEU SEQRES 2 B 156 VAL TYR ALA GLN GLY GLY GLY GLU PRO LYS PRO ILE ARG SEQRES 3 B 156 LEU GLU GLU LEU LYS PRO GLY ASP PRO PHE VAL LEU ALA SEQRES 4 B 156 TYR PRO MET ASP PRO LYS THR LYS VAL VAL LYS SER GLY SEQRES 5 B 156 GLU ALA LYS ASN THR LEU LEU VAL ALA ARG PHE ASP PRO SEQRES 6 B 156 GLU GLU LEU ALA PRO GLU VAL ALA GLN HIS ALA ALA GLU SEQRES 7 B 156 GLY VAL VAL ALA TYR SER ALA VAL CYS THR HIS LEU GLY SEQRES 8 B 156 CYS ILE VAL SER GLN TRP VAL ALA ASP GLU GLU ALA ALA SEQRES 9 B 156 LEU CYS PRO CYS HIS GLY GLY VAL TYR ASP LEU ARG HIS SEQRES 10 B 156 GLY ALA GLN VAL ILE ALA GLY PRO PRO PRO ARG PRO VAL SEQRES 11 B 156 PRO GLN LEU PRO VAL ARG VAL GLU ASP GLY VAL LEU VAL SEQRES 12 B 156 ALA ALA GLY GLU PHE LEU GLY PRO VAL GLY VAL GLN ALA HET FES A 204 4 HET PR A 205 1 HET PR A 206 1 HET PR A 207 1 HET PR A 208 1 HET PR A 209 1 HET CA A 212 1 HET ACT A 213 4 HET ACT A 214 4 HET FES B 204 4 HET PR B 210 2 HET CA B 211 1 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM PR PRASEODYMIUM ION HETNAM CA CALCIUM ION HETNAM ACT ACETATE ION FORMUL 3 FES 2(FE2 S2) FORMUL 4 PR 6(PR 3+) FORMUL 9 CA 2(CA 2+) FORMUL 10 ACT 2(C2 H3 O2 1-) FORMUL 15 HOH *114(H2 O) HELIX 1 1 THR A 46 GLU A 50 5 5 HELIX 2 2 ARG A 71 LEU A 75 5 5 HELIX 3 3 GLU A 98 ASN A 101 5 4 HELIX 4 4 ASP A 109 LEU A 113 5 5 HELIX 5 5 ALA A 114 GLN A 119 1 6 HELIX 6 6 THR B 46 GLU B 50 5 5 HELIX 7 7 ARG B 71 LEU B 75 5 5 HELIX 8 8 GLU B 98 ASN B 101 5 4 HELIX 9 9 ASP B 109 LEU B 113 5 5 HELIX 10 10 ALA B 114 GLN B 119 1 6 SHEET 1 A 5 ILE A 57 TYR A 60 0 SHEET 2 A 5 VAL A 82 MET A 87 -1 O TYR A 85 N VAL A 59 SHEET 3 A 5 LEU A 103 ARG A 107 -1 O LEU A 103 N ALA A 84 SHEET 4 A 5 VAL A 125 SER A 129 -1 O VAL A 126 N ALA A 106 SHEET 5 A 5 GLN A 177 LEU A 178 -1 O LEU A 178 N ALA A 127 SHEET 1 B 4 GLN A 141 VAL A 143 0 SHEET 2 B 4 ALA A 148 LEU A 150 -1 O LEU A 150 N GLN A 141 SHEET 3 B 4 VAL A 157 TYR A 158 -1 O TYR A 158 N ALA A 149 SHEET 4 B 4 VAL A 166 ALA A 168 -1 O ILE A 167 N VAL A 157 SHEET 1 C 2 VAL A 180 GLU A 183 0 SHEET 2 C 2 VAL A 186 ALA A 189 -1 O VAL A 188 N ARG A 181 SHEET 1 D 5 ILE B 57 TYR B 60 0 SHEET 2 D 5 VAL B 82 MET B 87 -1 O TYR B 85 N VAL B 59 SHEET 3 D 5 LEU B 103 ARG B 107 -1 O LEU B 103 N ALA B 84 SHEET 4 D 5 VAL B 125 SER B 129 -1 O VAL B 126 N ALA B 106 SHEET 5 D 5 GLN B 177 LEU B 178 -1 O LEU B 178 N ALA B 127 SHEET 1 E 4 GLN B 141 VAL B 143 0 SHEET 2 E 4 ALA B 148 LEU B 150 -1 O ALA B 148 N VAL B 143 SHEET 3 E 4 VAL B 157 TYR B 158 -1 O TYR B 158 N ALA B 149 SHEET 4 E 4 VAL B 166 ALA B 168 -1 O ILE B 167 N VAL B 157 SHEET 1 F 2 VAL B 180 GLU B 183 0 SHEET 2 F 2 VAL B 186 ALA B 189 -1 O VAL B 186 N GLU B 183 SSBOND 1 CYS A 137 CYS A 153 1555 1555 2.00 SSBOND 2 CYS B 137 CYS B 153 1555 1555 2.01 LINK OE1 GLU A 73 CA CA A 212 1555 1555 2.83 LINK SG CYS A 132 FE1 FES A 204 1555 1555 2.31 LINK ND1 HIS A 134 FE2 FES A 204 1555 1555 2.20 LINK SG CYS A 151 FE1 FES A 204 1555 1555 2.40 LINK ND1 HIS A 154 FE2 FES A 204 1555 1555 2.12 LINK OE1 GLU B 73 CA CA B 211 1555 1555 2.50 LINK OE2 GLU B 73 CA CA B 211 1555 1555 2.89 LINK SG CYS B 132 FE1 FES B 204 1555 1555 2.42 LINK ND1 HIS B 134 FE2 FES B 204 1555 1555 2.16 LINK SG CYS B 151 FE1 FES B 204 1555 1555 2.37 LINK ND1 HIS B 154 FE2 FES B 204 1555 1555 2.23 SITE 1 AC1 6 CYS A 132 HIS A 134 LEU A 135 CYS A 151 SITE 2 AC1 6 HIS A 154 GLY A 156 SITE 1 AC2 5 GLU A 66 HOH A 203 HOH A 227 GLU B 116 SITE 2 AC2 5 GLN B 119 SITE 1 AC3 6 ASP A 109 GLU A 111 HOH A 210 ACT A 213 SITE 2 AC3 6 GLU B 112 GLU B 147 SITE 1 AC4 4 GLU A 116 GLN A 119 HOH A 216 HOH A 228 SITE 1 AC5 6 GLU A 112 GLU A 147 HOH A 211 HOH A 233 SITE 2 AC5 6 ASP B 109 GLU B 111 SITE 1 AC6 5 GLU A 183 ASP A 184 ACT A 214 ASP B 184 SITE 2 AC6 5 HOH B 239 SITE 1 AC7 1 GLU A 73 SITE 1 AC8 6 HOH A 20 ASP A 109 GLU A 111 PR A 206 SITE 2 AC8 6 HOH A 210 GLU B 147 SITE 1 AC9 3 ASP A 184 PR A 209 PR B 210 SITE 1 BC1 6 CYS B 132 HIS B 134 LEU B 135 CYS B 151 SITE 2 BC1 6 HIS B 154 GLY B 156 SITE 1 BC2 6 GLU A 183 ACT A 214 HOH A 231 GLU B 183 SITE 2 BC2 6 GLN B 200 HOH B 240 SITE 1 BC3 1 GLU B 73 CRYST1 113.152 58.512 58.798 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008838 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017091 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017007 0.00000