HEADER OXIDOREDUCTASE 18-JAN-09 3FWF TITLE FERRIC CAMPHOR BOUND CYTOCHROME P450CAM CONTAINING A SELENOCYSTEINE AS TITLE 2 THE 5TH HEME LIGAND, MONOCLINIC CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMPHOR 5-MONOOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CYTOCHROME P450-CAM, CYTOCHROME P450CAM; COMPND 5 EC: 1.14.15.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 303; SOURCE 4 GENE: CAMC, CYP101; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SELENOCYSTEINE, HEMOPROTEIN, CYTOCHROME P450, CYTOCHROME, HEME, IRON, KEYWDS 2 METAL-BINDING, MONOOXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.SCHLICHTING,K.VON KOENIG,C.ALDAG,D.HILVERT REVDAT 7 21-FEB-24 3FWF 1 REMARK SEQADV LINK REVDAT 6 01-NOV-17 3FWF 1 REMARK REVDAT 5 06-AUG-14 3FWF 1 HET HETNAM FORMUL LINK REVDAT 4 09-APR-14 3FWF 1 COMPND REMARK SEQADV SEQRES REVDAT 4 2 1 HET MODRES HETNAM FORMUL REVDAT 4 3 1 LINK SITE HETATM REVDAT 3 21-APR-09 3FWF 1 JRNL REVDAT 2 31-MAR-09 3FWF 1 JRNL REVDAT 1 03-MAR-09 3FWF 0 JRNL AUTH C.ALDAG,I.A.GROMOV,I.GARCIA-RUBIO,K.VON KOENIG, JRNL AUTH 2 I.SCHLICHTING,B.JAUN,D.HILVERT JRNL TITL PROBING THE ROLE OF THE PROXIMAL HEME LIGAND IN CYTOCHROME JRNL TITL 2 P450CAM BY RECOMBINANT INCORPORATION OF SELENOCYSTEINE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 5481 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19293375 JRNL DOI 10.1073/PNAS.0810503106 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 65435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 3318 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4827 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1900 REMARK 3 BIN FREE R VALUE SET COUNT : 246 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 112 REMARK 3 SOLVENT ATOMS : 742 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.566 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6778 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9268 ; 1.529 ; 2.012 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 829 ; 5.436 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 318 ;33.210 ;23.994 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1115 ;13.787 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 50 ;13.865 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 991 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5276 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3583 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4657 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 646 ; 0.166 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 8 ; 0.142 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 55 ; 0.232 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 40 ; 0.125 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4118 ; 0.774 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6692 ; 1.488 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2678 ; 2.525 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2574 ; 4.133 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FWF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051126. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 MONOCHROMATOR, DYNAMICALLY REMARK 200 BENDABLE MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68754 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 45.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: RIGID BODY IN REFMAC STARTING FROM PDB ENTRY 1DZ4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24 % PEG 4000, 250 MM KCL, 50 MM REMARK 280 TRISHCL, PH 7.4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.96500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASN B 49 O HOH B 791 1.92 REMARK 500 O HOH A 653 O HOH A 725 1.94 REMARK 500 O HOH B 733 O HOH B 792 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 30 66.08 -158.05 REMARK 500 ASN A 33 37.77 -96.30 REMARK 500 TYR A 154 -58.81 -143.29 REMARK 500 ASP A 251 32.34 -141.55 REMARK 500 THR A 252 -74.33 -121.63 REMARK 500 ASP A 297 -159.74 -117.54 REMARK 500 LEU A 356 132.17 -38.93 REMARK 500 ASN B 30 67.14 -156.97 REMARK 500 TYR B 154 -51.40 -143.62 REMARK 500 ASP B 251 34.23 -146.79 REMARK 500 THR B 252 -79.01 -122.72 REMARK 500 ASP B 297 -158.18 -117.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 515 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 84 O REMARK 620 2 GLY A 93 O 83.8 REMARK 620 3 GLU A 94 O 159.7 77.0 REMARK 620 4 TYR A 96 O 88.3 83.2 96.1 REMARK 620 5 HOH A 430 O 92.8 100.7 84.2 176.0 REMARK 620 6 HOH A 467 O 102.4 170.4 97.5 89.6 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 417 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SEC A 357 SE REMARK 620 2 HEM A 417 NA 102.4 REMARK 620 3 HEM A 417 NB 93.4 88.2 REMARK 620 4 HEM A 417 NC 93.2 164.4 90.3 REMARK 620 5 HEM A 417 ND 103.8 88.4 162.8 88.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 715 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 8 O REMARK 620 2 PRO B 15 O 71.2 REMARK 620 3 PRO B 16 O 109.3 72.4 REMARK 620 4 VAL B 18 O 133.0 84.0 99.7 REMARK 620 5 GLU B 20 OE2 83.3 146.6 138.2 99.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 515 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 84 O REMARK 620 2 GLY B 93 O 84.6 REMARK 620 3 GLU B 94 O 158.3 77.0 REMARK 620 4 TYR B 96 O 97.1 85.1 92.7 REMARK 620 5 HOH B 467 O 126.0 149.3 73.2 89.2 REMARK 620 6 HOH B 519 O 88.5 95.5 82.0 174.4 87.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 417 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SEC B 357 SE REMARK 620 2 HEM B 417 NA 104.1 REMARK 620 3 HEM B 417 NB 92.7 89.6 REMARK 620 4 HEM B 417 NC 90.6 165.3 90.3 REMARK 620 5 HEM B 417 ND 103.6 89.4 163.4 86.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 716 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 540 O REMARK 620 2 HOH B 541 O 83.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAM A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAM B 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 716 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DZ4 RELATED DB: PDB REMARK 900 FERRIC WILDTYPE P450CAM FROM PSEUDOMONAS PUTIDA, MONOCLINIC CRYSTAL REMARK 900 FORM REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS A GLU -> GLN SEQUENCE CONFLICT AT RESIDUE 277 IN UNIPROT REMARK 999 DATABASE. DBREF 3FWF A 10 414 UNP P00183 CPXA_PSEPU 11 415 DBREF 3FWF B 10 414 UNP P00183 CPXA_PSEPU 11 415 SEQADV 3FWF GLN A 276 UNP P00183 GLU 277 SEE REMARK 999 SEQADV 3FWF SEC A 357 UNP P00183 CYS 358 ENGINEERED MUTATION SEQADV 3FWF LEU A 365 UNP P00183 ARG 366 ENGINEERED MUTATION SEQADV 3FWF GLN A 366 UNP P00183 GLU 367 ENGINEERED MUTATION SEQADV 3FWF GLN B 276 UNP P00183 GLU 277 SEE REMARK 999 SEQADV 3FWF SEC B 357 UNP P00183 CYS 358 ENGINEERED MUTATION SEQADV 3FWF LEU B 365 UNP P00183 ARG 366 ENGINEERED MUTATION SEQADV 3FWF GLN B 366 UNP P00183 GLU 367 ENGINEERED MUTATION SEQRES 1 A 405 ASN LEU ALA PRO LEU PRO PRO HIS VAL PRO GLU HIS LEU SEQRES 2 A 405 VAL PHE ASP PHE ASP MET TYR ASN PRO SER ASN LEU SER SEQRES 3 A 405 ALA GLY VAL GLN GLU ALA TRP ALA VAL LEU GLN GLU SER SEQRES 4 A 405 ASN VAL PRO ASP LEU VAL TRP THR ARG CYS ASN GLY GLY SEQRES 5 A 405 HIS TRP ILE ALA THR ARG GLY GLN LEU ILE ARG GLU ALA SEQRES 6 A 405 TYR GLU ASP TYR ARG HIS PHE SER SER GLU CYS PRO PHE SEQRES 7 A 405 ILE PRO ARG GLU ALA GLY GLU ALA TYR ASP PHE ILE PRO SEQRES 8 A 405 THR SER MET ASP PRO PRO GLU GLN ARG GLN PHE ARG ALA SEQRES 9 A 405 LEU ALA ASN GLN VAL VAL GLY MET PRO VAL VAL ASP LYS SEQRES 10 A 405 LEU GLU ASN ARG ILE GLN GLU LEU ALA CYS SER LEU ILE SEQRES 11 A 405 GLU SER LEU ARG PRO GLN GLY GLN CYS ASN PHE THR GLU SEQRES 12 A 405 ASP TYR ALA GLU PRO PHE PRO ILE ARG ILE PHE MET LEU SEQRES 13 A 405 LEU ALA GLY LEU PRO GLU GLU ASP ILE PRO HIS LEU LYS SEQRES 14 A 405 TYR LEU THR ASP GLN MET THR ARG PRO ASP GLY SER MET SEQRES 15 A 405 THR PHE ALA GLU ALA LYS GLU ALA LEU TYR ASP TYR LEU SEQRES 16 A 405 ILE PRO ILE ILE GLU GLN ARG ARG GLN LYS PRO GLY THR SEQRES 17 A 405 ASP ALA ILE SER ILE VAL ALA ASN GLY GLN VAL ASN GLY SEQRES 18 A 405 ARG PRO ILE THR SER ASP GLU ALA LYS ARG MET CYS GLY SEQRES 19 A 405 LEU LEU LEU VAL GLY GLY LEU ASP THR VAL VAL ASN PHE SEQRES 20 A 405 LEU SER PHE SER MET GLU PHE LEU ALA LYS SER PRO GLU SEQRES 21 A 405 HIS ARG GLN GLU LEU ILE GLN ARG PRO GLU ARG ILE PRO SEQRES 22 A 405 ALA ALA CYS GLU GLU LEU LEU ARG ARG PHE SER LEU VAL SEQRES 23 A 405 ALA ASP GLY ARG ILE LEU THR SER ASP TYR GLU PHE HIS SEQRES 24 A 405 GLY VAL GLN LEU LYS LYS GLY ASP GLN ILE LEU LEU PRO SEQRES 25 A 405 GLN MET LEU SER GLY LEU ASP GLU ARG GLU ASN ALA CYS SEQRES 26 A 405 PRO MET HIS VAL ASP PHE SER ARG GLN LYS VAL SER HIS SEQRES 27 A 405 THR THR PHE GLY HIS GLY SER HIS LEU SEC LEU GLY GLN SEQRES 28 A 405 HIS LEU ALA ARG LEU GLN ILE ILE VAL THR LEU LYS GLU SEQRES 29 A 405 TRP LEU THR ARG ILE PRO ASP PHE SER ILE ALA PRO GLY SEQRES 30 A 405 ALA GLN ILE GLN HIS LYS SER GLY ILE VAL SER GLY VAL SEQRES 31 A 405 GLN ALA LEU PRO LEU VAL TRP ASP PRO ALA THR THR LYS SEQRES 32 A 405 ALA VAL SEQRES 1 B 405 ASN LEU ALA PRO LEU PRO PRO HIS VAL PRO GLU HIS LEU SEQRES 2 B 405 VAL PHE ASP PHE ASP MET TYR ASN PRO SER ASN LEU SER SEQRES 3 B 405 ALA GLY VAL GLN GLU ALA TRP ALA VAL LEU GLN GLU SER SEQRES 4 B 405 ASN VAL PRO ASP LEU VAL TRP THR ARG CYS ASN GLY GLY SEQRES 5 B 405 HIS TRP ILE ALA THR ARG GLY GLN LEU ILE ARG GLU ALA SEQRES 6 B 405 TYR GLU ASP TYR ARG HIS PHE SER SER GLU CYS PRO PHE SEQRES 7 B 405 ILE PRO ARG GLU ALA GLY GLU ALA TYR ASP PHE ILE PRO SEQRES 8 B 405 THR SER MET ASP PRO PRO GLU GLN ARG GLN PHE ARG ALA SEQRES 9 B 405 LEU ALA ASN GLN VAL VAL GLY MET PRO VAL VAL ASP LYS SEQRES 10 B 405 LEU GLU ASN ARG ILE GLN GLU LEU ALA CYS SER LEU ILE SEQRES 11 B 405 GLU SER LEU ARG PRO GLN GLY GLN CYS ASN PHE THR GLU SEQRES 12 B 405 ASP TYR ALA GLU PRO PHE PRO ILE ARG ILE PHE MET LEU SEQRES 13 B 405 LEU ALA GLY LEU PRO GLU GLU ASP ILE PRO HIS LEU LYS SEQRES 14 B 405 TYR LEU THR ASP GLN MET THR ARG PRO ASP GLY SER MET SEQRES 15 B 405 THR PHE ALA GLU ALA LYS GLU ALA LEU TYR ASP TYR LEU SEQRES 16 B 405 ILE PRO ILE ILE GLU GLN ARG ARG GLN LYS PRO GLY THR SEQRES 17 B 405 ASP ALA ILE SER ILE VAL ALA ASN GLY GLN VAL ASN GLY SEQRES 18 B 405 ARG PRO ILE THR SER ASP GLU ALA LYS ARG MET CYS GLY SEQRES 19 B 405 LEU LEU LEU VAL GLY GLY LEU ASP THR VAL VAL ASN PHE SEQRES 20 B 405 LEU SER PHE SER MET GLU PHE LEU ALA LYS SER PRO GLU SEQRES 21 B 405 HIS ARG GLN GLU LEU ILE GLN ARG PRO GLU ARG ILE PRO SEQRES 22 B 405 ALA ALA CYS GLU GLU LEU LEU ARG ARG PHE SER LEU VAL SEQRES 23 B 405 ALA ASP GLY ARG ILE LEU THR SER ASP TYR GLU PHE HIS SEQRES 24 B 405 GLY VAL GLN LEU LYS LYS GLY ASP GLN ILE LEU LEU PRO SEQRES 25 B 405 GLN MET LEU SER GLY LEU ASP GLU ARG GLU ASN ALA CYS SEQRES 26 B 405 PRO MET HIS VAL ASP PHE SER ARG GLN LYS VAL SER HIS SEQRES 27 B 405 THR THR PHE GLY HIS GLY SER HIS LEU SEC LEU GLY GLN SEQRES 28 B 405 HIS LEU ALA ARG LEU GLN ILE ILE VAL THR LEU LYS GLU SEQRES 29 B 405 TRP LEU THR ARG ILE PRO ASP PHE SER ILE ALA PRO GLY SEQRES 30 B 405 ALA GLN ILE GLN HIS LYS SER GLY ILE VAL SER GLY VAL SEQRES 31 B 405 GLN ALA LEU PRO LEU VAL TRP ASP PRO ALA THR THR LYS SEQRES 32 B 405 ALA VAL HET HEM A 417 43 HET CAM A 420 11 HET K A 515 1 HET K B 515 1 HET HEM B 417 43 HET CAM B 420 11 HET K B 715 1 HET K B 716 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM CAM CAMPHOR HETNAM K POTASSIUM ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 CAM 2(C10 H16 O) FORMUL 5 K 4(K 1+) FORMUL 11 HOH *742(H2 O) HELIX 1 1 PRO A 19 VAL A 23 5 5 HELIX 2 2 ASN A 33 ALA A 36 5 4 HELIX 3 3 GLY A 37 ALA A 43 1 7 HELIX 4 4 VAL A 44 GLU A 47 5 4 HELIX 5 5 ARG A 57 GLY A 61 5 5 HELIX 6 6 ARG A 67 ASP A 77 1 11 HELIX 7 7 PRO A 89 TYR A 96 1 8 HELIX 8 8 GLN A 108 GLY A 120 1 13 HELIX 9 9 GLY A 120 ARG A 143 1 24 HELIX 10 10 PHE A 150 TYR A 154 1 5 HELIX 11 11 GLU A 156 GLY A 168 1 13 HELIX 12 12 PRO A 170 GLU A 172 5 3 HELIX 13 13 ASP A 173 ARG A 186 1 14 HELIX 14 14 THR A 192 LYS A 214 1 23 HELIX 15 15 ASP A 218 ASN A 225 1 8 HELIX 16 16 THR A 234 THR A 252 1 19 HELIX 17 17 THR A 252 LYS A 266 1 15 HELIX 18 18 SER A 267 ARG A 277 1 11 HELIX 19 19 ARG A 280 PHE A 292 1 13 HELIX 20 20 PRO A 321 SER A 325 5 5 HELIX 21 21 HIS A 352 LEU A 356 5 5 HELIX 22 22 GLY A 359 ILE A 378 1 20 HELIX 23 23 ASP A 407 THR A 411 5 5 HELIX 24 24 PRO B 19 VAL B 23 5 5 HELIX 25 25 ASN B 33 ALA B 36 5 4 HELIX 26 26 GLY B 37 VAL B 44 1 8 HELIX 27 27 LEU B 45 GLU B 47 5 3 HELIX 28 28 ARG B 57 GLY B 61 5 5 HELIX 29 29 ARG B 67 ASP B 77 1 11 HELIX 30 30 PRO B 89 TYR B 96 1 8 HELIX 31 31 GLN B 108 GLY B 120 1 13 HELIX 32 32 GLY B 120 ARG B 143 1 24 HELIX 33 33 PHE B 150 TYR B 154 1 5 HELIX 34 34 GLU B 156 GLY B 168 1 13 HELIX 35 35 PRO B 170 GLU B 172 5 3 HELIX 36 36 ASP B 173 ARG B 186 1 14 HELIX 37 37 THR B 192 LYS B 214 1 23 HELIX 38 38 ASP B 218 ASN B 225 1 8 HELIX 39 39 THR B 234 THR B 252 1 19 HELIX 40 40 THR B 252 LYS B 266 1 15 HELIX 41 41 SER B 267 ARG B 277 1 11 HELIX 42 42 ARG B 280 PHE B 292 1 13 HELIX 43 43 PRO B 321 ASP B 328 5 8 HELIX 44 44 HIS B 352 LEU B 356 5 5 HELIX 45 45 GLY B 359 ILE B 378 1 20 HELIX 46 46 ASP B 407 THR B 411 5 5 SHEET 1 A 5 LEU A 53 THR A 56 0 SHEET 2 A 5 HIS A 62 ALA A 65 -1 O HIS A 62 N THR A 56 SHEET 3 A 5 GLN A 317 LEU A 320 1 O GLN A 317 N TRP A 63 SHEET 4 A 5 ASP A 297 LEU A 301 -1 N ASP A 297 O LEU A 320 SHEET 5 A 5 PHE A 81 SER A 82 -1 N SER A 82 O ILE A 300 SHEET 1 B 3 GLN A 147 ASN A 149 0 SHEET 2 B 3 PRO A 403 VAL A 405 -1 O LEU A 404 N CYS A 148 SHEET 3 B 3 SER A 382 ILE A 383 -1 N SER A 382 O VAL A 405 SHEET 1 C 2 GLN A 227 VAL A 228 0 SHEET 2 C 2 ARG A 231 PRO A 232 -1 O ARG A 231 N VAL A 228 SHEET 1 D 2 TYR A 305 PHE A 307 0 SHEET 2 D 2 VAL A 310 LEU A 312 -1 O LEU A 312 N TYR A 305 SHEET 1 E 2 HIS A 391 LYS A 392 0 SHEET 2 E 2 GLY A 398 VAL A 399 -1 O GLY A 398 N LYS A 392 SHEET 1 F 5 LEU B 53 THR B 56 0 SHEET 2 F 5 HIS B 62 ALA B 65 -1 O HIS B 62 N THR B 56 SHEET 3 F 5 GLN B 317 LEU B 320 1 O LEU B 319 N TRP B 63 SHEET 4 F 5 ASP B 297 LEU B 301 -1 N ARG B 299 O ILE B 318 SHEET 5 F 5 PHE B 81 SER B 82 -1 N SER B 82 O ILE B 300 SHEET 1 G 3 GLN B 147 ASN B 149 0 SHEET 2 G 3 PRO B 403 VAL B 405 -1 O LEU B 404 N CYS B 148 SHEET 3 G 3 SER B 382 ILE B 383 -1 N SER B 382 O VAL B 405 SHEET 1 H 2 GLN B 227 VAL B 228 0 SHEET 2 H 2 ARG B 231 PRO B 232 -1 O ARG B 231 N VAL B 228 SHEET 1 I 2 TYR B 305 PHE B 307 0 SHEET 2 I 2 VAL B 310 LEU B 312 -1 O LEU B 312 N TYR B 305 SHEET 1 J 2 HIS B 391 LYS B 392 0 SHEET 2 J 2 GLY B 398 VAL B 399 -1 O GLY B 398 N LYS B 392 LINK O GLU A 84 K K A 515 1555 1555 2.65 LINK O GLY A 93 K K A 515 1555 1555 2.78 LINK O GLU A 94 K K A 515 1555 1555 2.94 LINK O TYR A 96 K K A 515 1555 1555 2.63 LINK SE SEC A 357 FE HEM A 417 1555 1555 2.47 LINK O HOH A 430 K K A 515 1555 1555 2.84 LINK O HOH A 467 K K A 515 1555 1555 2.88 LINK O HOH B 8 K K B 715 1555 1555 2.79 LINK O PRO B 15 K K B 715 1555 1555 2.93 LINK O PRO B 16 K K B 715 1555 1555 2.76 LINK O VAL B 18 K K B 715 1555 1555 2.62 LINK OE2 GLU B 20 K K B 715 1555 1555 2.87 LINK O GLU B 84 K K B 515 1555 1555 2.56 LINK O GLY B 93 K K B 515 1555 1555 2.83 LINK O GLU B 94 K K B 515 1555 1555 2.83 LINK O TYR B 96 K K B 515 1555 1555 2.61 LINK SE SEC B 357 FE HEM B 417 1555 1555 2.47 LINK O HOH B 467 K K B 515 1555 1555 3.17 LINK K K B 515 O HOH B 519 1555 1555 2.80 LINK O HOH B 540 K K B 716 1555 1555 3.44 LINK O HOH B 541 K K B 716 1555 1555 2.83 CISPEP 1 ILE A 88 PRO A 89 0 0.77 CISPEP 2 ILE A 99 PRO A 100 0 3.53 CISPEP 3 PRO A 105 PRO A 106 0 -2.09 CISPEP 4 ILE B 88 PRO B 89 0 0.33 CISPEP 5 ILE B 99 PRO B 100 0 5.52 CISPEP 6 PRO B 105 PRO B 106 0 1.17 SITE 1 AC1 20 PRO A 100 THR A 101 GLN A 108 ARG A 112 SITE 2 AC1 20 LEU A 244 LEU A 245 THR A 252 VAL A 253 SITE 3 AC1 20 LEU A 294 ASP A 297 ARG A 299 GLN A 322 SITE 4 AC1 20 THR A 349 PHE A 350 GLY A 351 HIS A 355 SITE 5 AC1 20 SEC A 357 LEU A 358 CAM A 420 HOH A 614 SITE 1 AC2 5 PHE A 87 TYR A 96 LEU A 244 VAL A 295 SITE 2 AC2 5 HEM A 417 SITE 1 AC3 6 GLU A 84 GLY A 93 GLU A 94 TYR A 96 SITE 2 AC3 6 HOH A 430 HOH A 467 SITE 1 AC4 5 GLU B 84 GLY B 93 GLU B 94 TYR B 96 SITE 2 AC4 5 HOH B 519 SITE 1 AC5 20 PRO B 100 THR B 101 GLN B 108 ARG B 112 SITE 2 AC5 20 LEU B 245 GLY B 248 GLY B 249 THR B 252 SITE 3 AC5 20 ASP B 297 ARG B 299 GLN B 322 THR B 349 SITE 4 AC5 20 PHE B 350 GLY B 351 HIS B 355 SEC B 357 SITE 5 AC5 20 LEU B 358 CAM B 420 HOH B 676 HOH B 782 SITE 1 AC6 5 PHE B 87 TYR B 96 LEU B 244 VAL B 295 SITE 2 AC6 5 HEM B 417 SITE 1 AC7 6 HOH B 8 LEU B 14 PRO B 15 PRO B 16 SITE 2 AC7 6 VAL B 18 GLU B 20 SITE 1 AC8 5 PRO B 105 PRO B 106 GLN B 108 ARG B 109 SITE 2 AC8 5 HOH B 541 CRYST1 67.520 61.930 94.460 90.00 90.80 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014810 0.000000 0.000206 0.00000 SCALE2 0.000000 0.016147 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010588 0.00000