data_3FXE # _entry.id 3FXE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FXE pdb_00003fxe 10.2210/pdb3fxe/pdb RCSB RCSB051158 ? ? WWPDB D_1000051158 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FXE _pdbx_database_status.recvd_initial_deposition_date 2009-01-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Raychaudhury, S.' 1 'Akey, C.W.' 2 'Head, J.F.' 3 # _citation.id primary _citation.title 'Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.' _citation.journal_abbrev Structure _citation.journal_volume 17 _citation.page_first 590 _citation.page_last 601 _citation.year 2009 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19368892 _citation.pdbx_database_id_DOI 10.1016/j.str.2009.02.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Raychaudhury, S.' 1 ? primary 'Farelli, J.D.' 2 ? primary 'Montminy, T.P.' 3 ? primary 'Matthews, M.' 4 ? primary 'Menetret, J.F.' 5 ? primary 'Dumenil, G.' 6 ? primary 'Roy, C.R.' 7 ? primary 'Head, J.F.' 8 ? primary 'Isberg, R.R.' 9 ? primary 'Akey, C.W.' 10 ? # _cell.entry_id 3FXE _cell.length_a 31.09 _cell.length_b 42.10 _cell.length_c 78.92 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FXE _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein IcmQ' 6557.525 1 ? ? 'UNP residues 1-57' ? 2 polymer man 'Protein IcmR' 7859.662 1 ? L84M 'UNP residues 23-95' ? 3 water nat water 18.015 33 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(MSE)KDQLSDEQKETILKALNDAIEKGPWDKSNFLRVIGKKLIAIRDRFLKRIGAASQAK' MKDQLSDEQKETILKALNDAIEKGPWDKSNFLRVIGKKLIAIRDRFLKRIGAASQAK A ? 2 'polypeptide(L)' no yes 'EIGEPDVTDATLGSVYSEIISPVKDCILTVAKAVSFNPGGKDNTDAVEVLTELNTKVERAA(MSE)NQPILTTKTER' EIGEPDVTDATLGSVYSEIISPVKDCILTVAKAVSFNPGGKDNTDAVEVLTELNTKVERAAMNQPILTTKTER B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 LYS n 1 3 ASP n 1 4 GLN n 1 5 LEU n 1 6 SER n 1 7 ASP n 1 8 GLU n 1 9 GLN n 1 10 LYS n 1 11 GLU n 1 12 THR n 1 13 ILE n 1 14 LEU n 1 15 LYS n 1 16 ALA n 1 17 LEU n 1 18 ASN n 1 19 ASP n 1 20 ALA n 1 21 ILE n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 PRO n 1 26 TRP n 1 27 ASP n 1 28 LYS n 1 29 SER n 1 30 ASN n 1 31 PHE n 1 32 LEU n 1 33 ARG n 1 34 VAL n 1 35 ILE n 1 36 GLY n 1 37 LYS n 1 38 LYS n 1 39 LEU n 1 40 ILE n 1 41 ALA n 1 42 ILE n 1 43 ARG n 1 44 ASP n 1 45 ARG n 1 46 PHE n 1 47 LEU n 1 48 LYS n 1 49 ARG n 1 50 ILE n 1 51 GLY n 1 52 ALA n 1 53 ALA n 1 54 SER n 1 55 GLN n 1 56 ALA n 1 57 LYS n 2 1 GLU n 2 2 ILE n 2 3 GLY n 2 4 GLU n 2 5 PRO n 2 6 ASP n 2 7 VAL n 2 8 THR n 2 9 ASP n 2 10 ALA n 2 11 THR n 2 12 LEU n 2 13 GLY n 2 14 SER n 2 15 VAL n 2 16 TYR n 2 17 SER n 2 18 GLU n 2 19 ILE n 2 20 ILE n 2 21 SER n 2 22 PRO n 2 23 VAL n 2 24 LYS n 2 25 ASP n 2 26 CYS n 2 27 ILE n 2 28 LEU n 2 29 THR n 2 30 VAL n 2 31 ALA n 2 32 LYS n 2 33 ALA n 2 34 VAL n 2 35 SER n 2 36 PHE n 2 37 ASN n 2 38 PRO n 2 39 GLY n 2 40 GLY n 2 41 LYS n 2 42 ASP n 2 43 ASN n 2 44 THR n 2 45 ASP n 2 46 ALA n 2 47 VAL n 2 48 GLU n 2 49 VAL n 2 50 LEU n 2 51 THR n 2 52 GLU n 2 53 LEU n 2 54 ASN n 2 55 THR n 2 56 LYS n 2 57 VAL n 2 58 GLU n 2 59 ARG n 2 60 ALA n 2 61 ALA n 2 62 MSE n 2 63 ASN n 2 64 GLN n 2 65 PRO n 2 66 ILE n 2 67 LEU n 2 68 THR n 2 69 THR n 2 70 LYS n 2 71 THR n 2 72 GLU n 2 73 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? 'icmQ, LPC_2899' ? Corby ? ? ? ? 'Legionella pneumophila' 400673 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'XL-1 blue' ? ? ? ? ? ? ? plasmid ? ? ? pET21b ? ? 2 1 sample ? ? ? ? ? 'icmR, lpg0443' ? 'Philadelphia-1 / DSM 7513' ? ? ? ? 'Legionella pneumophila subsp. pneumophila str. Philadelphia 1' 272624 ? ? 33152 ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'Xl-1 blue' ? ? ? ? ? ? ? plasmid ? ? ? pET21b ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP A5IHF0_LEGPC A5IHF0 1 MKDQLSDEQKETILKALNDAIEKGPWDKSNFLRVIGKKLIAIRDRFLKRIGAASQAK 1 ? 2 UNP Q5ZYC9_LEGPH Q5ZYC9 2 EIGEPDVTDATLGSVYSEIISPVKDCILTVAKAVSFNPGGKDNTDAVEVLTELNTKVERAALNQPILTTKTER 23 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FXE A 1 ? 57 ? A5IHF0 1 ? 57 ? 1 57 2 2 3FXE B 1 ? 73 ? Q5ZYC9 23 ? 95 ? 23 95 # _struct_ref_seq_dif.align_id 2 _struct_ref_seq_dif.pdbx_pdb_id_code 3FXE _struct_ref_seq_dif.mon_id MSE _struct_ref_seq_dif.pdbx_pdb_strand_id B _struct_ref_seq_dif.seq_num 62 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q5ZYC9 _struct_ref_seq_dif.db_mon_id LEU _struct_ref_seq_dif.pdbx_seq_db_seq_num 84 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 84 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FXE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.80 _exptl_crystal.density_percent_sol 31.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.pdbx_details '100 mM Na acetate pH 4.7, 30% PEG 1500, 100 mM L-cysteine, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2004-08-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97950 1.0 2 0.97976 1.0 3 0.95003 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97950, 0.97976, 0.95003' # _reflns.entry_id 3FXE _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.20 _reflns.number_obs 10087 _reflns.number_all 10087 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.040 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 23.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.130 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 18.0 _reflns_shell.pdbx_redundancy 7.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 541 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3FXE _refine.ls_number_reflns_obs 10087 _refine.ls_number_reflns_all 10087 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.23 _refine.ls_R_factor_all 0.23 _refine.ls_R_factor_R_work 0.23 _refine.ls_R_factor_R_free 0.25 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 841 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 803 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 836 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.05 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 3FXE _struct.title 'Crystal structure of interacting domains of IcmR and IcmQ (seleno-derivative)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FXE _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text '4 helix bundle, helix-turn-helix, Se-Met, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? GLY A 24 ? SER A 6 GLY A 24 1 ? 19 HELX_P HELX_P2 2 SER A 29 ? GLY A 51 ? SER A 29 GLY A 51 1 ? 23 HELX_P HELX_P3 3 THR B 11 ? ILE B 19 ? THR B 33 ILE B 41 1 ? 9 HELX_P HELX_P4 4 ILE B 19 ? ASN B 37 ? ILE B 41 ASN B 59 1 ? 19 HELX_P HELX_P5 5 LYS B 41 ? ASN B 63 ? LYS B 63 ASN B 85 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ALA 61 C ? ? ? 1_555 B MSE 62 N ? ? B ALA 83 B MSE 84 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? B MSE 62 C ? ? ? 1_555 B ASN 63 N ? ? B MSE 84 B ASN 85 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3FXE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FXE _atom_sites.fract_transf_matrix[1][1] 0.032165 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023753 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012671 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 LYS 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ALA 52 52 ? ? ? A . n A 1 53 ALA 53 53 ? ? ? A . n A 1 54 SER 54 54 ? ? ? A . n A 1 55 GLN 55 55 ? ? ? A . n A 1 56 ALA 56 56 ? ? ? A . n A 1 57 LYS 57 57 ? ? ? A . n B 2 1 GLU 1 23 ? ? ? B . n B 2 2 ILE 2 24 ? ? ? B . n B 2 3 GLY 3 25 ? ? ? B . n B 2 4 GLU 4 26 ? ? ? B . n B 2 5 PRO 5 27 ? ? ? B . n B 2 6 ASP 6 28 ? ? ? B . n B 2 7 VAL 7 29 ? ? ? B . n B 2 8 THR 8 30 30 THR THR B . n B 2 9 ASP 9 31 31 ASP ASP B . n B 2 10 ALA 10 32 32 ALA ALA B . n B 2 11 THR 11 33 33 THR THR B . n B 2 12 LEU 12 34 34 LEU LEU B . n B 2 13 GLY 13 35 35 GLY GLY B . n B 2 14 SER 14 36 36 SER SER B . n B 2 15 VAL 15 37 37 VAL VAL B . n B 2 16 TYR 16 38 38 TYR TYR B . n B 2 17 SER 17 39 39 SER SER B . n B 2 18 GLU 18 40 40 GLU GLU B . n B 2 19 ILE 19 41 41 ILE ILE B . n B 2 20 ILE 20 42 42 ILE ILE B . n B 2 21 SER 21 43 43 SER SER B . n B 2 22 PRO 22 44 44 PRO PRO B . n B 2 23 VAL 23 45 45 VAL VAL B . n B 2 24 LYS 24 46 46 LYS LYS B . n B 2 25 ASP 25 47 47 ASP ASP B . n B 2 26 CYS 26 48 48 CYS CYS B . n B 2 27 ILE 27 49 49 ILE ILE B . n B 2 28 LEU 28 50 50 LEU LEU B . n B 2 29 THR 29 51 51 THR THR B . n B 2 30 VAL 30 52 52 VAL VAL B . n B 2 31 ALA 31 53 53 ALA ALA B . n B 2 32 LYS 32 54 54 LYS LYS B . n B 2 33 ALA 33 55 55 ALA ALA B . n B 2 34 VAL 34 56 56 VAL VAL B . n B 2 35 SER 35 57 57 SER SER B . n B 2 36 PHE 36 58 58 PHE PHE B . n B 2 37 ASN 37 59 59 ASN ASN B . n B 2 38 PRO 38 60 60 PRO PRO B . n B 2 39 GLY 39 61 61 GLY GLY B . n B 2 40 GLY 40 62 62 GLY GLY B . n B 2 41 LYS 41 63 63 LYS LYS B . n B 2 42 ASP 42 64 64 ASP ASP B . n B 2 43 ASN 43 65 65 ASN ASN B . n B 2 44 THR 44 66 66 THR THR B . n B 2 45 ASP 45 67 67 ASP ASP B . n B 2 46 ALA 46 68 68 ALA ALA B . n B 2 47 VAL 47 69 69 VAL VAL B . n B 2 48 GLU 48 70 70 GLU GLU B . n B 2 49 VAL 49 71 71 VAL VAL B . n B 2 50 LEU 50 72 72 LEU LEU B . n B 2 51 THR 51 73 73 THR THR B . n B 2 52 GLU 52 74 74 GLU GLU B . n B 2 53 LEU 53 75 75 LEU LEU B . n B 2 54 ASN 54 76 76 ASN ASN B . n B 2 55 THR 55 77 77 THR THR B . n B 2 56 LYS 56 78 78 LYS LYS B . n B 2 57 VAL 57 79 79 VAL VAL B . n B 2 58 GLU 58 80 80 GLU GLU B . n B 2 59 ARG 59 81 81 ARG ARG B . n B 2 60 ALA 60 82 82 ALA ALA B . n B 2 61 ALA 61 83 83 ALA ALA B . n B 2 62 MSE 62 84 84 MSE MSE B . n B 2 63 ASN 63 85 85 ASN ASN B . n B 2 64 GLN 64 86 ? ? ? B . n B 2 65 PRO 65 87 ? ? ? B . n B 2 66 ILE 66 88 ? ? ? B . n B 2 67 LEU 67 89 ? ? ? B . n B 2 68 THR 68 90 ? ? ? B . n B 2 69 THR 69 91 ? ? ? B . n B 2 70 LYS 70 92 ? ? ? B . n B 2 71 THR 71 93 ? ? ? B . n B 2 72 GLU 72 94 ? ? ? B . n B 2 73 ARG 73 95 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 58 1 HOH WAT A . C 3 HOH 2 59 2 HOH WAT A . C 3 HOH 3 60 14 HOH WAT A . C 3 HOH 4 61 23 HOH WAT A . C 3 HOH 5 62 30 HOH WAT A . C 3 HOH 6 63 31 HOH WAT A . C 3 HOH 7 64 32 HOH WAT A . C 3 HOH 8 65 33 HOH WAT A . D 3 HOH 1 3 3 HOH WAT B . D 3 HOH 2 4 4 HOH WAT B . D 3 HOH 3 5 5 HOH WAT B . D 3 HOH 4 6 6 HOH WAT B . D 3 HOH 5 7 7 HOH WAT B . D 3 HOH 6 8 8 HOH WAT B . D 3 HOH 7 9 9 HOH WAT B . D 3 HOH 8 10 10 HOH WAT B . D 3 HOH 9 11 11 HOH WAT B . D 3 HOH 10 12 12 HOH WAT B . D 3 HOH 11 13 13 HOH WAT B . D 3 HOH 12 15 15 HOH WAT B . D 3 HOH 13 16 16 HOH WAT B . D 3 HOH 14 17 17 HOH WAT B . D 3 HOH 15 18 18 HOH WAT B . D 3 HOH 16 19 19 HOH WAT B . D 3 HOH 17 20 20 HOH WAT B . D 3 HOH 18 21 21 HOH WAT B . D 3 HOH 19 22 22 HOH WAT B . D 3 HOH 20 96 24 HOH WAT B . D 3 HOH 21 97 25 HOH WAT B . D 3 HOH 22 98 26 HOH WAT B . D 3 HOH 23 99 27 HOH WAT B . D 3 HOH 24 100 28 HOH WAT B . D 3 HOH 25 101 29 HOH WAT B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 62 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 84 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2320 ? 1 MORE -16.11 ? 1 'SSA (A^2)' 5840 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-04-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SOLVE phasing . ? 2 CNS refinement 1.0 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 65 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 96 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_556 _pdbx_validate_symm_contact.dist 2.08 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 25 ? ? -75.62 41.70 2 1 ASP B 31 ? ? 65.50 141.94 3 1 ILE B 41 ? ? -135.01 -68.58 4 1 PRO B 60 ? ? -53.25 -75.32 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A LYS 2 ? A LYS 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A ALA 52 ? A ALA 52 5 1 Y 1 A ALA 53 ? A ALA 53 6 1 Y 1 A SER 54 ? A SER 54 7 1 Y 1 A GLN 55 ? A GLN 55 8 1 Y 1 A ALA 56 ? A ALA 56 9 1 Y 1 A LYS 57 ? A LYS 57 10 1 Y 1 B GLU 23 ? B GLU 1 11 1 Y 1 B ILE 24 ? B ILE 2 12 1 Y 1 B GLY 25 ? B GLY 3 13 1 Y 1 B GLU 26 ? B GLU 4 14 1 Y 1 B PRO 27 ? B PRO 5 15 1 Y 1 B ASP 28 ? B ASP 6 16 1 Y 1 B VAL 29 ? B VAL 7 17 1 Y 1 B GLN 86 ? B GLN 64 18 1 Y 1 B PRO 87 ? B PRO 65 19 1 Y 1 B ILE 88 ? B ILE 66 20 1 Y 1 B LEU 89 ? B LEU 67 21 1 Y 1 B THR 90 ? B THR 68 22 1 Y 1 B THR 91 ? B THR 69 23 1 Y 1 B LYS 92 ? B LYS 70 24 1 Y 1 B THR 93 ? B THR 71 25 1 Y 1 B GLU 94 ? B GLU 72 26 1 Y 1 B ARG 95 ? B ARG 73 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #