HEADER TRANSFERASE 22-JAN-09 3FYP TITLE CRYSTAL STRUCTURE OF THE QUADRUPLE MUTANT (N23C/C246S/D247E/P249A) OF TITLE 2 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE (KDO8PS) FROM TITLE 3 NEISSERIA MENINGITIDIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-DEOXY-D-MANNO-OCTULOSONIC ACID 8-PHOSPHATE SYNTHETASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, PHOSPHO-2- COMPND 5 DEHYDRO-3-DEOXYOCTONATE ALDOLASE, KDO-8-PHOSPHATE SYNTHETASE, KDO 8-P COMPND 6 SYNTHASE, KDOPS; COMPND 7 EC: 2.5.1.55; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS SEROGROUP B; SOURCE 3 ORGANISM_TAXID: 491; SOURCE 4 GENE: KDSA, NMB1283; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS MANNO-OCTULOSONATE, SYNTHASE, LIPOPOLYSACCHARIDE, KDOP, KDO8 KDOPS, KEYWDS 2 KDO8PS, TIM BARREL, BIOSYNTHESIS, TRANSFERASE, LYASE, KEYWDS 3 LIPOPOLYSACCHARIDE BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR G.B.JAMESON,E.J.PARKER,F.P.COCHRANE,M.L.PATCHETT REVDAT 5 06-SEP-23 3FYP 1 REMARK REVDAT 4 20-OCT-21 3FYP 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 3FYP 1 VERSN REVDAT 2 21-JUL-09 3FYP 1 JRNL REVDAT 1 31-MAR-09 3FYP 0 JRNL AUTH F.C.COCHRANE,T.V.COOKSON,G.B.JAMESON,E.J.PARKER JRNL TITL REVERSING EVOLUTION: RE-ESTABLISHING OBLIGATE METAL ION JRNL TITL 2 DEPENDENCE IN A METAL-INDEPENDENT KDO8P SYNTHASE JRNL REF J.MOL.BIOL. V. 390 646 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19447118 JRNL DOI 10.1016/J.JMB.2009.05.014 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 98469 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4964 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6817 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.4350 REMARK 3 BIN FREE R VALUE SET COUNT : 387 REMARK 3 BIN FREE R VALUE : 0.4710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7786 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 590 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 31.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.47000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.710 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8154 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5468 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11071 ; 1.257 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13517 ; 1.628 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1072 ; 6.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 326 ;35.812 ;24.969 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1455 ;15.417 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;21.756 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1316 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9004 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1533 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5174 ; 2.873 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2112 ; 1.313 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8381 ; 3.968 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2980 ; 2.443 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2663 ; 3.668 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 4 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 50 5 REMARK 3 1 B 3 B 50 5 REMARK 3 1 C 3 C 50 5 REMARK 3 1 D 3 D 50 5 REMARK 3 2 A 77 A 198 5 REMARK 3 2 B 77 B 198 5 REMARK 3 2 C 77 C 198 5 REMARK 3 2 D 77 D 198 5 REMARK 3 3 A 220 A 234 6 REMARK 3 3 B 220 B 234 6 REMARK 3 3 C 220 C 234 6 REMARK 3 3 D 220 D 234 6 REMARK 3 4 A 258 A 274 5 REMARK 3 4 B 258 B 274 5 REMARK 3 4 C 258 C 274 5 REMARK 3 4 D 258 D 274 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1048 ; 0.170 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1048 ; 0.330 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1048 ; 0.200 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1048 ; 0.300 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 1309 ; 0.490 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 B (A): 1309 ; 0.680 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 C (A): 1309 ; 0.590 ; 5.000 REMARK 3 LOOSE POSITIONAL 1 D (A): 1309 ; 0.770 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1048 ; 3.570 ; 3.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1048 ; 2.970 ; 3.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1048 ; 3.600 ; 3.000 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1048 ; 2.810 ; 3.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 1309 ; 2.980 ;10.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 1309 ; 2.630 ;10.000 REMARK 3 LOOSE THERMAL 1 C (A**2): 1309 ; 2.990 ;10.000 REMARK 3 LOOSE THERMAL 1 D (A**2): 1309 ; 2.470 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 279 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1760 14.8850 80.6200 REMARK 3 T TENSOR REMARK 3 T11: 0.0465 T22: 0.0756 REMARK 3 T33: 0.0329 T12: -0.0108 REMARK 3 T13: 0.0091 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.1836 L22: 0.2351 REMARK 3 L33: 0.4233 L12: -0.1721 REMARK 3 L13: 0.0514 L23: 0.0530 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: -0.0261 S13: 0.0293 REMARK 3 S21: 0.0057 S22: 0.0054 S23: 0.0188 REMARK 3 S31: 0.0200 S32: -0.0199 S33: 0.0145 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 277 REMARK 3 ORIGIN FOR THE GROUP (A): 22.5470 8.3810 40.9990 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.0978 REMARK 3 T33: 0.0206 T12: -0.0079 REMARK 3 T13: -0.0111 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.1457 L22: 0.2365 REMARK 3 L33: 0.3008 L12: -0.1339 REMARK 3 L13: -0.1994 L23: 0.1270 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 0.0295 S13: -0.0120 REMARK 3 S21: -0.0714 S22: -0.0059 S23: 0.0150 REMARK 3 S31: -0.0028 S32: -0.0869 S33: -0.0041 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 277 REMARK 3 ORIGIN FOR THE GROUP (A): 37.5110 -11.3330 73.0330 REMARK 3 T TENSOR REMARK 3 T11: 0.1658 T22: 0.0135 REMARK 3 T33: 0.0097 T12: 0.0353 REMARK 3 T13: 0.0086 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.3686 L22: 1.6035 REMARK 3 L33: 0.5679 L12: -0.6195 REMARK 3 L13: -0.3210 L23: 0.2829 REMARK 3 S TENSOR REMARK 3 S11: -0.1485 S12: 0.0326 S13: -0.0054 REMARK 3 S21: 0.3415 S22: 0.0795 S23: 0.0508 REMARK 3 S31: 0.1979 S32: 0.0656 S33: 0.0690 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES RESIDUAL ONLY. THESE CLOSE CONTACTS ARE A REMARK 3 CONSEQUENCE OF UNRESOLVED DISORDER IN SIDE CHAINS AND/OR WATER REMARK 3 MOLECULES. CLOSE WATER-WATER CONTACTS MAY BE ASCRIBED TO POORLY REMARK 3 DEFINED GLYCEROL (CRYOPROTECTANT) SPECIES. PHI/PSI VALUES FOR REMARK 3 RESIDUES 6 AND 229 ARE HIGHLY CONSERVED IN KDO8PS AND ARE REMARK 3 LOCATED IN WELL-DEFINED ELECTRON DENSITY. RESIDES 56 AND 172 REMARK 3 (CHAINS B AND C) LIE IN WELL-DEFINED ELECTRON DENSITY. OTHER REMARK 3 RESIDUES WITH POOR PHI/PSI VALUES LIE IN REGIONS OF POOR DENSITY REMARK 3 IN ILL-DEFINED LOOPS OR AT FRAYED BEGINNINGS AND ENDS OF MISSING REMARK 3 LOOPS. REMARK 4 REMARK 4 3FYP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051203. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC BLUE OPTIC REMARK 200 OPTICS : OSMIC BLUE OPTIC REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98477 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 37.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.880 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.34300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2QKF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27.7 MG/ML PROTEIN MIXED 1:1 WITH REMARK 280 RESERVOIR LIQUOR CONTAINING 100 MM NAOAC (PH 5.0), 2 MM PEP, 850 REMARK 280 MICROM MNSO4 AND 2.0 M NACL. IMMEDIATELY PRIOR TO DATA REMARK 280 COLLECTION, CRYSTALS WERE HARVESTED AND SOAKED BRIEFLY IN REMARK 280 CRYOPROTECTANT SOLUTION, COMPRISING 20% GLYCEROL AND THE REMARK 280 RESEVOIR SOLUTION, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 297K, PH 5.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.89050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.91400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.83950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.91400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.89050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.83950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 204 REMARK 465 ASP A 205 REMARK 465 ALA A 206 REMARK 465 GLY A 207 REMARK 465 SER A 208 REMARK 465 ALA A 209 REMARK 465 ALA A 210 REMARK 465 PRO A 239 REMARK 465 ASP A 240 REMARK 465 PRO A 241 REMARK 465 LYS A 242 REMARK 465 LEU A 243 REMARK 465 ALA A 244 REMARK 465 LYS A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 GLY A 248 REMARK 465 ALA A 249 REMARK 465 SER A 250 REMARK 465 ALA A 251 REMARK 465 LEU A 252 REMARK 465 ILE A 279 REMARK 465 GLU A 280 REMARK 465 THR B 203 REMARK 465 ARG B 204 REMARK 465 ASP B 205 REMARK 465 ALA B 206 REMARK 465 GLY B 207 REMARK 465 SER B 208 REMARK 465 ALA B 209 REMARK 465 ALA B 210 REMARK 465 SER B 211 REMARK 465 HIS B 238 REMARK 465 PRO B 239 REMARK 465 ASP B 240 REMARK 465 PRO B 241 REMARK 465 LYS B 242 REMARK 465 LEU B 243 REMARK 465 ALA B 244 REMARK 465 LYS B 245 REMARK 465 SER B 246 REMARK 465 GLU B 247 REMARK 465 GLY B 248 REMARK 465 ALA B 249 REMARK 465 SER B 250 REMARK 465 ALA B 251 REMARK 465 LEU B 252 REMARK 465 PRO B 253 REMARK 465 LEU B 254 REMARK 465 GLU B 280 REMARK 465 THR C 203 REMARK 465 ARG C 204 REMARK 465 ASP C 205 REMARK 465 ALA C 206 REMARK 465 GLY C 207 REMARK 465 SER C 208 REMARK 465 ALA C 209 REMARK 465 ALA C 210 REMARK 465 SER C 211 REMARK 465 PRO C 239 REMARK 465 ASP C 240 REMARK 465 PRO C 241 REMARK 465 LYS C 242 REMARK 465 LEU C 243 REMARK 465 ALA C 244 REMARK 465 LYS C 245 REMARK 465 SER C 246 REMARK 465 GLU C 247 REMARK 465 GLY C 248 REMARK 465 ALA C 249 REMARK 465 SER C 250 REMARK 465 THR C 278 REMARK 465 ILE C 279 REMARK 465 GLU C 280 REMARK 465 HIS D 64 REMARK 465 SER D 65 REMARK 465 ARG D 204 REMARK 465 ASP D 205 REMARK 465 ALA D 206 REMARK 465 GLY D 207 REMARK 465 SER D 208 REMARK 465 ALA D 209 REMARK 465 ALA D 210 REMARK 465 SER D 211 REMARK 465 GLY D 212 REMARK 465 ASP D 240 REMARK 465 PRO D 241 REMARK 465 LYS D 242 REMARK 465 LEU D 243 REMARK 465 ALA D 244 REMARK 465 LYS D 245 REMARK 465 SER D 246 REMARK 465 GLU D 247 REMARK 465 GLY D 248 REMARK 465 ALA D 249 REMARK 465 SER D 250 REMARK 465 THR D 278 REMARK 465 ILE D 279 REMARK 465 GLU D 280 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 7 CG OD1 OD2 REMARK 470 LYS A 57 CD CE NZ REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 GLN A 186 CD OE1 NE2 REMARK 470 GLN A 202 CG CD OE1 NE2 REMARK 470 ARG A 215 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 238 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 117 NE CZ NH1 NH2 REMARK 470 GLN B 202 CD OE1 NE2 REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 215 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 279 CG1 CG2 CD1 REMARK 470 LYS C 146 CD CE NZ REMARK 470 ARG C 214 CD NE CZ NH1 NH2 REMARK 470 ARG C 215 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 43 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 72 CG CD OE1 OE2 REMARK 470 GLU D 73 CG CD OE1 OE2 REMARK 470 LYS D 80 CD CE NZ REMARK 470 LYS D 127 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS A 199 O HOH A 334 0.88 REMARK 500 CG HIS A 199 O HOH A 334 1.38 REMARK 500 NE2 HIS A 199 O HOH A 333 1.47 REMARK 500 CD2 HIS A 199 O HOH A 333 1.65 REMARK 500 CE1 HIS A 199 O HOH A 334 1.72 REMARK 500 OE1 GLN A 138 O HOH A 796 2.04 REMARK 500 NZ LYS D 76 O HOH D 553 2.09 REMARK 500 OG SER B 62 O HOH B 464 2.13 REMARK 500 O HOH A 285 O HOH B 730 2.14 REMARK 500 O HOH C 298 O HOH C 562 2.18 REMARK 500 O HOH C 461 O HOH C 783 2.18 REMARK 500 N SER D 54 O HOH D 800 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 689 O HOH C 544 2555 1.94 REMARK 500 OE1 GLU B 104 O HOH C 544 2555 1.95 REMARK 500 CG ASP D 259 O HOH C 795 3645 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 6 -121.35 62.34 REMARK 500 GLU A 26 -53.96 -134.56 REMARK 500 ARG A 165 17.07 -142.97 REMARK 500 ARG A 229 89.81 76.27 REMARK 500 SER A 237 -47.22 -169.49 REMARK 500 HIS A 255 76.26 -115.44 REMARK 500 ASN B 6 -118.27 48.53 REMARK 500 ASP B 56 81.46 -156.71 REMARK 500 ASP B 172 -47.56 69.37 REMARK 500 LEU B 201 -83.61 -79.37 REMARK 500 ARG B 229 87.27 79.06 REMARK 500 ASN C 6 -117.27 53.13 REMARK 500 ASP C 56 83.23 -157.21 REMARK 500 ASP C 172 -45.25 77.68 REMARK 500 LEU C 201 -80.40 -89.74 REMARK 500 ARG C 229 83.17 80.65 REMARK 500 ASN D 6 -113.60 45.45 REMARK 500 ARG D 60 -131.74 -70.60 REMARK 500 SER D 61 -59.43 -131.03 REMARK 500 SER D 62 92.37 145.04 REMARK 500 ARG D 229 87.34 75.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 236 SER A 237 148.18 REMARK 500 LEU B 201 GLN B 202 -143.31 REMARK 500 HIS B 255 LEU B 256 -146.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER B 200 10.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 283 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 168 O REMARK 620 2 SER D 168 OG 120.2 REMARK 620 3 HOH D 454 O 85.6 110.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 281 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA C 103 O REMARK 620 2 CYS C 106 O 91.8 REMARK 620 3 ASN C 130 OD1 85.8 84.3 REMARK 620 4 HOH C 568 O 150.2 116.1 86.8 REMARK 620 5 HOH C 569 O 104.5 90.1 168.5 86.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 2647 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEP D 281 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 282 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA D 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 284 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QKF RELATED DB: PDB REMARK 900 WILD-TYPE KDO8PS FROM NEISSERIA MENINGITIDIS DBREF 3FYP A 1 280 UNP Q9JZ55 KDSA_NEIMB 1 280 DBREF 3FYP B 1 280 UNP Q9JZ55 KDSA_NEIMB 1 280 DBREF 3FYP C 1 280 UNP Q9JZ55 KDSA_NEIMB 1 280 DBREF 3FYP D 1 280 UNP Q9JZ55 KDSA_NEIMB 1 280 SEQADV 3FYP CYS A 23 UNP Q9JZ55 ASN 23 ENGINEERED MUTATION SEQADV 3FYP SER A 246 UNP Q9JZ55 CYS 246 ENGINEERED MUTATION SEQADV 3FYP GLU A 247 UNP Q9JZ55 ASP 247 ENGINEERED MUTATION SEQADV 3FYP ALA A 249 UNP Q9JZ55 PRO 249 ENGINEERED MUTATION SEQADV 3FYP CYS B 23 UNP Q9JZ55 ASN 23 ENGINEERED MUTATION SEQADV 3FYP SER B 246 UNP Q9JZ55 CYS 246 ENGINEERED MUTATION SEQADV 3FYP GLU B 247 UNP Q9JZ55 ASP 247 ENGINEERED MUTATION SEQADV 3FYP ALA B 249 UNP Q9JZ55 PRO 249 ENGINEERED MUTATION SEQADV 3FYP CYS C 23 UNP Q9JZ55 ASN 23 ENGINEERED MUTATION SEQADV 3FYP SER C 246 UNP Q9JZ55 CYS 246 ENGINEERED MUTATION SEQADV 3FYP GLU C 247 UNP Q9JZ55 ASP 247 ENGINEERED MUTATION SEQADV 3FYP ALA C 249 UNP Q9JZ55 PRO 249 ENGINEERED MUTATION SEQADV 3FYP CYS D 23 UNP Q9JZ55 ASN 23 ENGINEERED MUTATION SEQADV 3FYP SER D 246 UNP Q9JZ55 CYS 246 ENGINEERED MUTATION SEQADV 3FYP GLU D 247 UNP Q9JZ55 ASP 247 ENGINEERED MUTATION SEQADV 3FYP ALA D 249 UNP Q9JZ55 PRO 249 ENGINEERED MUTATION SEQRES 1 A 280 MET ASP ILE LYS ILE ASN ASP ILE THR LEU GLY ASN ASN SEQRES 2 A 280 SER PRO PHE VAL LEU PHE GLY GLY ILE CYS VAL LEU GLU SEQRES 3 A 280 SER LEU ASP SER THR LEU GLN THR CYS ALA HIS TYR VAL SEQRES 4 A 280 GLU VAL THR ARG LYS LEU GLY ILE PRO TYR ILE PHE LYS SEQRES 5 A 280 ALA SER PHE ASP LYS ALA ASN ARG SER SER ILE HIS SER SEQRES 6 A 280 TYR ARG GLY VAL GLY LEU GLU GLU GLY LEU LYS ILE PHE SEQRES 7 A 280 GLU LYS VAL LYS ALA GLU PHE GLY ILE PRO VAL ILE THR SEQRES 8 A 280 ASP VAL HIS GLU PRO HIS GLN CYS GLN PRO VAL ALA GLU SEQRES 9 A 280 VAL CYS ASP VAL ILE GLN LEU PRO ALA PHE LEU ALA ARG SEQRES 10 A 280 GLN THR ASP LEU VAL VAL ALA MET ALA LYS THR GLY ASN SEQRES 11 A 280 VAL VAL ASN ILE LYS LYS PRO GLN PHE LEU SER PRO SER SEQRES 12 A 280 GLN MET LYS ASN ILE VAL GLU LYS PHE HIS GLU ALA GLY SEQRES 13 A 280 ASN GLY LYS LEU ILE LEU CYS GLU ARG GLY SER SER PHE SEQRES 14 A 280 GLY TYR ASP ASN LEU VAL VAL ASP MET LEU GLY PHE GLY SEQRES 15 A 280 VAL MET LYS GLN THR CYS GLY ASN LEU PRO VAL ILE PHE SEQRES 16 A 280 ASP VAL THR HIS SER LEU GLN THR ARG ASP ALA GLY SER SEQRES 17 A 280 ALA ALA SER GLY GLY ARG ARG ALA GLN ALA LEU ASP LEU SEQRES 18 A 280 ALA LEU ALA GLY MET ALA THR ARG LEU ALA GLY LEU PHE SEQRES 19 A 280 LEU GLU SER HIS PRO ASP PRO LYS LEU ALA LYS SER GLU SEQRES 20 A 280 GLY ALA SER ALA LEU PRO LEU HIS LEU LEU GLU ASP PHE SEQRES 21 A 280 LEU ILE ARG ILE LYS ALA LEU ASP ASP LEU ILE LYS SER SEQRES 22 A 280 GLN PRO ILE LEU THR ILE GLU SEQRES 1 B 280 MET ASP ILE LYS ILE ASN ASP ILE THR LEU GLY ASN ASN SEQRES 2 B 280 SER PRO PHE VAL LEU PHE GLY GLY ILE CYS VAL LEU GLU SEQRES 3 B 280 SER LEU ASP SER THR LEU GLN THR CYS ALA HIS TYR VAL SEQRES 4 B 280 GLU VAL THR ARG LYS LEU GLY ILE PRO TYR ILE PHE LYS SEQRES 5 B 280 ALA SER PHE ASP LYS ALA ASN ARG SER SER ILE HIS SER SEQRES 6 B 280 TYR ARG GLY VAL GLY LEU GLU GLU GLY LEU LYS ILE PHE SEQRES 7 B 280 GLU LYS VAL LYS ALA GLU PHE GLY ILE PRO VAL ILE THR SEQRES 8 B 280 ASP VAL HIS GLU PRO HIS GLN CYS GLN PRO VAL ALA GLU SEQRES 9 B 280 VAL CYS ASP VAL ILE GLN LEU PRO ALA PHE LEU ALA ARG SEQRES 10 B 280 GLN THR ASP LEU VAL VAL ALA MET ALA LYS THR GLY ASN SEQRES 11 B 280 VAL VAL ASN ILE LYS LYS PRO GLN PHE LEU SER PRO SER SEQRES 12 B 280 GLN MET LYS ASN ILE VAL GLU LYS PHE HIS GLU ALA GLY SEQRES 13 B 280 ASN GLY LYS LEU ILE LEU CYS GLU ARG GLY SER SER PHE SEQRES 14 B 280 GLY TYR ASP ASN LEU VAL VAL ASP MET LEU GLY PHE GLY SEQRES 15 B 280 VAL MET LYS GLN THR CYS GLY ASN LEU PRO VAL ILE PHE SEQRES 16 B 280 ASP VAL THR HIS SER LEU GLN THR ARG ASP ALA GLY SER SEQRES 17 B 280 ALA ALA SER GLY GLY ARG ARG ALA GLN ALA LEU ASP LEU SEQRES 18 B 280 ALA LEU ALA GLY MET ALA THR ARG LEU ALA GLY LEU PHE SEQRES 19 B 280 LEU GLU SER HIS PRO ASP PRO LYS LEU ALA LYS SER GLU SEQRES 20 B 280 GLY ALA SER ALA LEU PRO LEU HIS LEU LEU GLU ASP PHE SEQRES 21 B 280 LEU ILE ARG ILE LYS ALA LEU ASP ASP LEU ILE LYS SER SEQRES 22 B 280 GLN PRO ILE LEU THR ILE GLU SEQRES 1 C 280 MET ASP ILE LYS ILE ASN ASP ILE THR LEU GLY ASN ASN SEQRES 2 C 280 SER PRO PHE VAL LEU PHE GLY GLY ILE CYS VAL LEU GLU SEQRES 3 C 280 SER LEU ASP SER THR LEU GLN THR CYS ALA HIS TYR VAL SEQRES 4 C 280 GLU VAL THR ARG LYS LEU GLY ILE PRO TYR ILE PHE LYS SEQRES 5 C 280 ALA SER PHE ASP LYS ALA ASN ARG SER SER ILE HIS SER SEQRES 6 C 280 TYR ARG GLY VAL GLY LEU GLU GLU GLY LEU LYS ILE PHE SEQRES 7 C 280 GLU LYS VAL LYS ALA GLU PHE GLY ILE PRO VAL ILE THR SEQRES 8 C 280 ASP VAL HIS GLU PRO HIS GLN CYS GLN PRO VAL ALA GLU SEQRES 9 C 280 VAL CYS ASP VAL ILE GLN LEU PRO ALA PHE LEU ALA ARG SEQRES 10 C 280 GLN THR ASP LEU VAL VAL ALA MET ALA LYS THR GLY ASN SEQRES 11 C 280 VAL VAL ASN ILE LYS LYS PRO GLN PHE LEU SER PRO SER SEQRES 12 C 280 GLN MET LYS ASN ILE VAL GLU LYS PHE HIS GLU ALA GLY SEQRES 13 C 280 ASN GLY LYS LEU ILE LEU CYS GLU ARG GLY SER SER PHE SEQRES 14 C 280 GLY TYR ASP ASN LEU VAL VAL ASP MET LEU GLY PHE GLY SEQRES 15 C 280 VAL MET LYS GLN THR CYS GLY ASN LEU PRO VAL ILE PHE SEQRES 16 C 280 ASP VAL THR HIS SER LEU GLN THR ARG ASP ALA GLY SER SEQRES 17 C 280 ALA ALA SER GLY GLY ARG ARG ALA GLN ALA LEU ASP LEU SEQRES 18 C 280 ALA LEU ALA GLY MET ALA THR ARG LEU ALA GLY LEU PHE SEQRES 19 C 280 LEU GLU SER HIS PRO ASP PRO LYS LEU ALA LYS SER GLU SEQRES 20 C 280 GLY ALA SER ALA LEU PRO LEU HIS LEU LEU GLU ASP PHE SEQRES 21 C 280 LEU ILE ARG ILE LYS ALA LEU ASP ASP LEU ILE LYS SER SEQRES 22 C 280 GLN PRO ILE LEU THR ILE GLU SEQRES 1 D 280 MET ASP ILE LYS ILE ASN ASP ILE THR LEU GLY ASN ASN SEQRES 2 D 280 SER PRO PHE VAL LEU PHE GLY GLY ILE CYS VAL LEU GLU SEQRES 3 D 280 SER LEU ASP SER THR LEU GLN THR CYS ALA HIS TYR VAL SEQRES 4 D 280 GLU VAL THR ARG LYS LEU GLY ILE PRO TYR ILE PHE LYS SEQRES 5 D 280 ALA SER PHE ASP LYS ALA ASN ARG SER SER ILE HIS SER SEQRES 6 D 280 TYR ARG GLY VAL GLY LEU GLU GLU GLY LEU LYS ILE PHE SEQRES 7 D 280 GLU LYS VAL LYS ALA GLU PHE GLY ILE PRO VAL ILE THR SEQRES 8 D 280 ASP VAL HIS GLU PRO HIS GLN CYS GLN PRO VAL ALA GLU SEQRES 9 D 280 VAL CYS ASP VAL ILE GLN LEU PRO ALA PHE LEU ALA ARG SEQRES 10 D 280 GLN THR ASP LEU VAL VAL ALA MET ALA LYS THR GLY ASN SEQRES 11 D 280 VAL VAL ASN ILE LYS LYS PRO GLN PHE LEU SER PRO SER SEQRES 12 D 280 GLN MET LYS ASN ILE VAL GLU LYS PHE HIS GLU ALA GLY SEQRES 13 D 280 ASN GLY LYS LEU ILE LEU CYS GLU ARG GLY SER SER PHE SEQRES 14 D 280 GLY TYR ASP ASN LEU VAL VAL ASP MET LEU GLY PHE GLY SEQRES 15 D 280 VAL MET LYS GLN THR CYS GLY ASN LEU PRO VAL ILE PHE SEQRES 16 D 280 ASP VAL THR HIS SER LEU GLN THR ARG ASP ALA GLY SER SEQRES 17 D 280 ALA ALA SER GLY GLY ARG ARG ALA GLN ALA LEU ASP LEU SEQRES 18 D 280 ALA LEU ALA GLY MET ALA THR ARG LEU ALA GLY LEU PHE SEQRES 19 D 280 LEU GLU SER HIS PRO ASP PRO LYS LEU ALA LYS SER GLU SEQRES 20 D 280 GLY ALA SER ALA LEU PRO LEU HIS LEU LEU GLU ASP PHE SEQRES 21 D 280 LEU ILE ARG ILE LYS ALA LEU ASP ASP LEU ILE LYS SER SEQRES 22 D 280 GLN PRO ILE LEU THR ILE GLU HET CL A 281 1 HET GOL B 281 6 HET GOL B2647 6 HET NA C 281 1 HET PEP D 281 10 HET CL D 282 1 HET NA D 283 1 HET MN D 284 1 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM PEP PHOSPHOENOLPYRUVATE HETNAM MN MANGANESE (II) ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 CL 2(CL 1-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 NA 2(NA 1+) FORMUL 9 PEP C3 H5 O6 P FORMUL 12 MN MN 2+ FORMUL 13 HOH *590(H2 O) HELIX 1 1 SER A 27 GLY A 46 1 20 HELIX 2 2 VAL A 69 GLY A 86 1 18 HELIX 3 3 GLU A 95 HIS A 97 5 3 HELIX 4 4 GLN A 98 CYS A 106 1 9 HELIX 5 5 PRO A 112 ALA A 116 5 5 HELIX 6 6 GLN A 118 GLY A 129 1 12 HELIX 7 7 SER A 141 SER A 143 5 3 HELIX 8 8 GLN A 144 ALA A 155 1 12 HELIX 9 9 LEU A 179 CYS A 188 1 10 HELIX 10 10 THR A 198 LEU A 201 5 4 HELIX 11 11 GLY A 213 ALA A 227 1 15 HELIX 12 12 HIS A 255 SER A 273 1 19 HELIX 13 13 SER B 27 GLY B 46 1 20 HELIX 14 14 GLY B 70 GLY B 86 1 17 HELIX 15 15 GLU B 95 HIS B 97 5 3 HELIX 16 16 GLN B 98 GLU B 104 1 7 HELIX 17 17 PRO B 112 ALA B 116 5 5 HELIX 18 18 GLN B 118 LYS B 127 1 10 HELIX 19 19 SER B 141 SER B 143 5 3 HELIX 20 20 GLN B 144 ALA B 155 1 12 HELIX 21 21 LEU B 179 CYS B 188 1 10 HELIX 22 22 GLY B 213 ALA B 227 1 15 HELIX 23 23 HIS B 255 SER B 273 1 19 HELIX 24 24 LEU C 28 GLY C 46 1 19 HELIX 25 25 GLY C 70 GLY C 86 1 17 HELIX 26 26 GLU C 95 HIS C 97 5 3 HELIX 27 27 GLN C 98 GLU C 104 1 7 HELIX 28 28 PRO C 112 ALA C 116 5 5 HELIX 29 29 GLN C 118 LYS C 127 1 10 HELIX 30 30 SER C 141 SER C 143 5 3 HELIX 31 31 GLN C 144 ALA C 155 1 12 HELIX 32 32 LEU C 179 CYS C 188 1 10 HELIX 33 33 GLY C 212 ALA C 227 1 16 HELIX 34 34 LEU C 256 SER C 273 1 18 HELIX 35 35 SER D 27 GLY D 46 1 20 HELIX 36 36 GLY D 70 GLY D 86 1 17 HELIX 37 37 GLU D 95 HIS D 97 5 3 HELIX 38 38 GLN D 98 GLU D 104 1 7 HELIX 39 39 PRO D 112 ALA D 116 5 5 HELIX 40 40 GLN D 118 THR D 128 1 11 HELIX 41 41 SER D 141 SER D 143 5 3 HELIX 42 42 GLN D 144 ALA D 155 1 12 HELIX 43 43 LEU D 179 CYS D 188 1 10 HELIX 44 44 THR D 198 GLN D 202 5 5 HELIX 45 45 GLY D 213 ALA D 227 1 15 HELIX 46 46 LEU D 256 SER D 273 1 18 SHEET 1 A 2 ILE A 3 ILE A 5 0 SHEET 2 A 2 ILE A 8 LEU A 10 -1 O LEU A 10 N ILE A 3 SHEET 1 B 9 VAL A 17 VAL A 24 0 SHEET 2 B 9 TYR A 49 SER A 54 1 O LYS A 52 N ILE A 22 SHEET 3 B 9 VAL A 89 ASP A 92 1 O ILE A 90 N PHE A 51 SHEET 4 B 9 VAL A 108 LEU A 111 1 O GLN A 110 N THR A 91 SHEET 5 B 9 VAL A 131 LYS A 135 1 O ASN A 133 N LEU A 111 SHEET 6 B 9 LEU A 160 GLU A 164 1 O ILE A 161 N ILE A 134 SHEET 7 B 9 VAL A 193 ASP A 196 1 O ILE A 194 N LEU A 162 SHEET 8 B 9 GLY A 232 LEU A 235 1 O PHE A 234 N PHE A 195 SHEET 9 B 9 VAL A 17 VAL A 24 1 N PHE A 19 O LEU A 235 SHEET 1 C 2 SER A 167 SER A 168 0 SHEET 2 C 2 LEU A 174 VAL A 175 -1 O VAL A 175 N SER A 167 SHEET 1 D 2 ILE B 3 ILE B 5 0 SHEET 2 D 2 ILE B 8 LEU B 10 -1 O ILE B 8 N ILE B 5 SHEET 1 E 9 VAL B 17 VAL B 24 0 SHEET 2 E 9 TYR B 49 SER B 54 1 O ILE B 50 N LEU B 18 SHEET 3 E 9 VAL B 89 ASP B 92 1 O ILE B 90 N PHE B 51 SHEET 4 E 9 VAL B 108 LEU B 111 1 O GLN B 110 N THR B 91 SHEET 5 E 9 VAL B 131 LYS B 135 1 O ASN B 133 N LEU B 111 SHEET 6 E 9 LEU B 160 GLU B 164 1 O ILE B 161 N ILE B 134 SHEET 7 E 9 VAL B 193 ASP B 196 1 O ASP B 196 N GLU B 164 SHEET 8 E 9 GLY B 232 PHE B 234 1 O PHE B 234 N PHE B 195 SHEET 9 E 9 VAL B 17 VAL B 24 1 N PHE B 19 O LEU B 233 SHEET 1 F 2 SER B 167 SER B 168 0 SHEET 2 F 2 LEU B 174 VAL B 175 -1 O VAL B 175 N SER B 167 SHEET 1 G 2 ILE C 3 ILE C 5 0 SHEET 2 G 2 ILE C 8 LEU C 10 -1 O LEU C 10 N ILE C 3 SHEET 1 H10 LEU C 252 PRO C 253 0 SHEET 2 H10 GLY C 232 HIS C 238 1 N GLU C 236 O LEU C 252 SHEET 3 H10 VAL C 193 ASP C 196 1 N PHE C 195 O PHE C 234 SHEET 4 H10 LEU C 160 GLU C 164 1 N GLU C 164 O ASP C 196 SHEET 5 H10 VAL C 131 LYS C 135 1 N ILE C 134 O ILE C 161 SHEET 6 H10 VAL C 108 LEU C 111 1 N LEU C 111 O ASN C 133 SHEET 7 H10 VAL C 89 ASP C 92 1 N THR C 91 O GLN C 110 SHEET 8 H10 TYR C 49 SER C 54 1 N PHE C 51 O ILE C 90 SHEET 9 H10 VAL C 17 VAL C 24 1 N LEU C 18 O ILE C 50 SHEET 10 H10 GLY C 232 HIS C 238 1 O LEU C 233 N PHE C 19 SHEET 1 I 2 SER C 167 SER C 168 0 SHEET 2 I 2 LEU C 174 VAL C 175 -1 O VAL C 175 N SER C 167 SHEET 1 J 2 ILE D 3 ILE D 5 0 SHEET 2 J 2 ILE D 8 LEU D 10 -1 O ILE D 8 N ILE D 5 SHEET 1 K10 LEU D 252 PRO D 253 0 SHEET 2 K10 GLY D 232 HIS D 238 1 N GLU D 236 O LEU D 252 SHEET 3 K10 VAL D 193 ASP D 196 1 N PHE D 195 O PHE D 234 SHEET 4 K10 LEU D 160 GLU D 164 1 N LEU D 162 O ILE D 194 SHEET 5 K10 VAL D 131 LYS D 135 1 N ILE D 134 O ILE D 161 SHEET 6 K10 VAL D 108 LEU D 111 1 N LEU D 111 O ASN D 133 SHEET 7 K10 VAL D 89 ASP D 92 1 N VAL D 89 O VAL D 108 SHEET 8 K10 TYR D 49 SER D 54 1 N PHE D 51 O ILE D 90 SHEET 9 K10 VAL D 17 VAL D 24 1 N LEU D 18 O ILE D 50 SHEET 10 K10 GLY D 232 HIS D 238 1 O LEU D 233 N PHE D 19 SHEET 1 L 2 SER D 167 SER D 168 0 SHEET 2 L 2 LEU D 174 VAL D 175 -1 O VAL D 175 N SER D 167 LINK O SER B 168 NA NA D 283 1555 1555 2.45 LINK O ALA C 103 NA NA C 281 1555 1555 2.24 LINK O CYS C 106 NA NA C 281 1555 1555 2.49 LINK OD1 ASN C 130 NA NA C 281 1555 1555 2.43 LINK NA NA C 281 O HOH C 568 1555 1555 2.29 LINK NA NA C 281 O HOH C 569 1555 1555 2.19 LINK OG BSER D 168 NA NA D 283 1555 1555 2.62 LINK NA NA D 283 O HOH D 454 1555 1555 2.22 SITE 1 AC1 5 HIS A 37 HIS A 255 LEU A 256 LEU A 257 SITE 2 AC1 5 GLU A 258 SITE 1 AC2 9 GLY B 21 ILE B 22 CYS B 23 LYS B 52 SITE 2 AC2 9 LYS B 57 GLU B 236 SER B 237 HOH B 451 SITE 3 AC2 9 HOH B 766 SITE 1 AC3 8 LYS B 82 ALA B 103 GLU B 104 VAL B 105 SITE 2 AC3 8 ASP B 107 ASN B 130 HOH B 387 HOH B 799 SITE 1 AC4 6 HOH B 689 ALA C 103 CYS C 106 ASN C 130 SITE 2 AC4 6 HOH C 568 HOH C 569 SITE 1 AC5 13 LYS D 52 SER D 54 LYS D 57 GLN D 110 SITE 2 AC5 13 ALA D 113 LYS D 135 ARG D 165 HIS D 199 SITE 3 AC5 13 CL D 282 HOH D 541 HOH D 542 HOH D 555 SITE 4 AC5 13 HOH D 582 SITE 1 AC6 6 LYS D 52 GLN D 110 LYS D 135 HIS D 199 SITE 2 AC6 6 PHE D 234 PEP D 281 SITE 1 AC7 5 SER B 168 SER D 168 GLY D 170 HOH D 454 SITE 2 AC7 5 HOH D 478 SITE 1 AC8 3 CYS D 23 HIS D 199 GLU D 236 CRYST1 81.781 85.679 163.828 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012228 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006104 0.00000