data_3FZ4 # _entry.id 3FZ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FZ4 pdb_00003fz4 10.2210/pdb3fz4/pdb RCSB RCSB051218 ? ? WWPDB D_1000051218 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC61768 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FZ4 _pdbx_database_status.recvd_initial_deposition_date 2009-01-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Hatzos, C.' 2 'Shackelford, G.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'The crystal structure of a possible arsenate reductase from Streptococcus mutans UA159.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tan, K.' 1 ? primary 'Hatzos, C.' 2 ? primary 'Shackelford, G.' 3 ? primary 'Joachimiak, A.' 4 ? # _cell.entry_id 3FZ4 _cell.length_a 31.857 _cell.length_b 41.357 _cell.length_c 76.795 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FZ4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative arsenate reductase' 13745.392 1 ? D101G ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 non-polymer syn 'FORMIC ACID' 46.025 4 ? ? ? ? 5 water nat water 18.015 130 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)LTFYEYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDKL HQLSLDEAANLLASDG(MSE)LIKRPLLVKEGKIVQIGYRTAYEDLDF ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMLTFYEYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDKLHQLS LDEAANLLASDGMLIKRPLLVKEGKIVQIGYRTAYEDLDF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC61768 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 LEU n 1 6 THR n 1 7 PHE n 1 8 TYR n 1 9 GLU n 1 10 TYR n 1 11 PRO n 1 12 LYS n 1 13 CYS n 1 14 SER n 1 15 THR n 1 16 CYS n 1 17 ARG n 1 18 ARG n 1 19 ALA n 1 20 LYS n 1 21 ALA n 1 22 GLU n 1 23 LEU n 1 24 ASP n 1 25 ASP n 1 26 LEU n 1 27 ALA n 1 28 TRP n 1 29 ASP n 1 30 TYR n 1 31 ASP n 1 32 ALA n 1 33 ILE n 1 34 ASP n 1 35 ILE n 1 36 LYS n 1 37 LYS n 1 38 ASN n 1 39 PRO n 1 40 PRO n 1 41 ALA n 1 42 ALA n 1 43 SER n 1 44 LEU n 1 45 ILE n 1 46 ARG n 1 47 ASN n 1 48 TRP n 1 49 LEU n 1 50 GLU n 1 51 ASN n 1 52 SER n 1 53 GLY n 1 54 LEU n 1 55 GLU n 1 56 LEU n 1 57 LYS n 1 58 LYS n 1 59 PHE n 1 60 PHE n 1 61 ASN n 1 62 THR n 1 63 SER n 1 64 GLY n 1 65 GLN n 1 66 SER n 1 67 TYR n 1 68 ARG n 1 69 ALA n 1 70 LEU n 1 71 GLY n 1 72 LEU n 1 73 LYS n 1 74 ASP n 1 75 LYS n 1 76 LEU n 1 77 HIS n 1 78 GLN n 1 79 LEU n 1 80 SER n 1 81 LEU n 1 82 ASP n 1 83 GLU n 1 84 ALA n 1 85 ALA n 1 86 ASN n 1 87 LEU n 1 88 LEU n 1 89 ALA n 1 90 SER n 1 91 ASP n 1 92 GLY n 1 93 MSE n 1 94 LEU n 1 95 ILE n 1 96 LYS n 1 97 ARG n 1 98 PRO n 1 99 LEU n 1 100 LEU n 1 101 VAL n 1 102 LYS n 1 103 GLU n 1 104 GLY n 1 105 LYS n 1 106 ILE n 1 107 VAL n 1 108 GLN n 1 109 ILE n 1 110 GLY n 1 111 TYR n 1 112 ARG n 1 113 THR n 1 114 ALA n 1 115 TYR n 1 116 GLU n 1 117 ASP n 1 118 LEU n 1 119 ASP n 1 120 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SMU_1651 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'UA159, serotype c.' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus mutans UA159' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 210007 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 700610 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8DSV8_STRMU _struct_ref.pdbx_db_accession Q8DSV8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLTFYEYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDKLHQLSLDE AANLLASDGMLIKRPLLVKEDKIVQIGYRTAYEDLDF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FZ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8DSV8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 117 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 117 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FZ4 SER A 1 ? UNP Q8DSV8 ? ? 'expression tag' -2 1 1 3FZ4 ASN A 2 ? UNP Q8DSV8 ? ? 'expression tag' -1 2 1 3FZ4 ALA A 3 ? UNP Q8DSV8 ? ? 'expression tag' 0 3 1 3FZ4 GLY A 104 ? UNP Q8DSV8 ASP 101 'engineered mutation' 101 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FZ4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.84 _exptl_crystal.density_percent_sol 33.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.2M Zn(OAc)2, 0.1M Acetate, 10% w/v PEG 3000, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-10-08 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) crystal' _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97857 # _reflns.entry_id 3FZ4 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 24.51 _reflns.d_resolution_high 1.38 _reflns.number_obs 21569 _reflns.number_all 21569 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 41.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.38 _reflns_shell.d_res_low 1.40 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.625 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.62 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1034 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3FZ4 _refine.ls_number_reflns_obs 20334 _refine.ls_number_reflns_all 20334 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 24.51 _refine.ls_d_res_high 1.38 _refine.ls_percent_reflns_obs 99.26 _refine.ls_R_factor_obs 0.16880 _refine.ls_R_factor_all 0.16880 _refine.ls_R_factor_R_work 0.16661 _refine.ls_R_factor_R_free 0.20786 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1098 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.954 _refine.B_iso_mean 17.487 _refine.aniso_B[1][1] 0.07 _refine.aniso_B[2][2] -0.07 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.085 _refine.pdbx_overall_ESU_R_Free 0.072 _refine.overall_SU_ML 0.041 _refine.overall_SU_B 2.168 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1068 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 1215 _refine_hist.d_res_high 1.38 _refine_hist.d_res_low 24.51 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.022 ? 1119 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.393 1.998 ? 1531 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.101 5.000 ? 155 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43.121 24.727 ? 55 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.676 15.000 ? 225 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.212 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 169 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 854 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.513 1.500 ? 664 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.388 2.000 ? 1072 'X-RAY DIFFRACTION' ? r_scbond_it 3.088 3.000 ? 455 'X-RAY DIFFRACTION' ? r_scangle_it 4.503 4.500 ? 438 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.767 3.000 ? 1119 'X-RAY DIFFRACTION' ? r_sphericity_free 6.866 3.000 ? 135 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4.465 3.000 ? 1084 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.38 _refine_ls_shell.d_res_low 1.41 _refine_ls_shell.number_reflns_R_work 1407 _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.percent_reflns_obs 96.40 _refine_ls_shell.R_factor_R_free 0.303 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1472 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FZ4 _struct.title 'The crystal structure of a possible arsenate reductase from Streptococcus mutans UA159' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FZ4 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;APC61768, arsenate reductase, Streptococcus mutans UA159, structural genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details 'AUTHORS STATE THAT THE BIOLOGICAL UNIT IS EXPERIMENTALLY UNKNOWN. IT IS PREDICTED TO BE A MONOMERIC.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 13 ? ALA A 27 ? CYS A 10 ALA A 24 1 ? 15 HELX_P HELX_P2 2 ALA A 41 ? SER A 52 ? ALA A 38 SER A 49 1 ? 12 HELX_P HELX_P3 3 GLU A 55 ? PHE A 60 ? GLU A 52 PHE A 57 5 ? 6 HELX_P HELX_P4 4 GLY A 64 ? LEU A 70 ? GLY A 61 LEU A 67 1 ? 7 HELX_P HELX_P5 5 GLY A 71 ? LEU A 76 ? GLY A 68 LEU A 73 1 ? 6 HELX_P HELX_P6 6 HIS A 77 ? LEU A 79 ? HIS A 74 LEU A 76 5 ? 3 HELX_P HELX_P7 7 SER A 80 ? ASP A 91 ? SER A 77 ASP A 88 1 ? 12 HELX_P HELX_P8 8 GLY A 92 ? ILE A 95 ? GLY A 89 ILE A 92 5 ? 4 HELX_P HELX_P9 9 ALA A 114 ? ASP A 119 ? ALA A 111 ASP A 116 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 16 SG ? ? A CYS 10 A CYS 13 1_555 ? ? ? ? ? ? ? 2.219 ? ? covale1 covale both ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A MSE 4 C ? ? ? 1_555 A LEU 5 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale3 covale both ? A GLY 92 C ? ? ? 1_555 A MSE 93 N ? ? A GLY 89 A MSE 90 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale4 covale both ? A MSE 93 C ? ? ? 1_555 A LEU 94 N ? ? A MSE 90 A LEU 91 1_555 ? ? ? ? ? ? ? 1.336 ? ? metalc1 metalc ? ? A GLN 108 O ? ? ? 1_555 B NA . NA ? ? A GLN 105 A NA 201 1_555 ? ? ? ? ? ? ? 2.961 ? ? metalc2 metalc ? ? A GLY 110 O ? ? ? 1_555 B NA . NA ? ? A GLY 107 A NA 201 1_555 ? ? ? ? ? ? ? 2.767 ? ? metalc3 metalc ? ? A TYR 115 OH ? ? ? 1_555 B NA . NA ? ? A TYR 112 A NA 201 1_555 ? ? ? ? ? ? ? 2.691 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 97 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 98 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.52 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 30 ? ASP A 34 ? TYR A 27 ASP A 31 A 2 LEU A 5 ? GLU A 9 ? LEU A 2 GLU A 6 A 3 LEU A 99 ? LYS A 102 ? LEU A 96 LYS A 99 A 4 LYS A 105 ? ILE A 109 ? LYS A 102 ILE A 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 33 ? O ILE A 30 N PHE A 7 ? N PHE A 4 A 2 3 N THR A 6 ? N THR A 3 O VAL A 101 ? O VAL A 98 A 3 4 N LYS A 102 ? N LYS A 99 O LYS A 105 ? O LYS A 102 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 201 ? 5 'BINDING SITE FOR RESIDUE NA A 201' AC2 Software A EDO 202 ? 7 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software A FMT 203 ? 4 'BINDING SITE FOR RESIDUE FMT A 203' AC4 Software A FMT 204 ? 7 'BINDING SITE FOR RESIDUE FMT A 204' AC5 Software A FMT 205 ? 5 'BINDING SITE FOR RESIDUE FMT A 205' AC6 Software A FMT 206 ? 7 'BINDING SITE FOR RESIDUE FMT A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PRO A 98 ? PRO A 95 . ? 1_555 ? 2 AC1 5 LEU A 100 ? LEU A 97 . ? 1_555 ? 3 AC1 5 GLN A 108 ? GLN A 105 . ? 1_555 ? 4 AC1 5 GLY A 110 ? GLY A 107 . ? 1_555 ? 5 AC1 5 TYR A 115 ? TYR A 112 . ? 1_555 ? 6 AC2 7 ASN A 38 ? ASN A 35 . ? 4_455 ? 7 AC2 7 PRO A 39 ? PRO A 36 . ? 4_455 ? 8 AC2 7 PRO A 40 ? PRO A 37 . ? 4_455 ? 9 AC2 7 ALA A 41 ? ALA A 38 . ? 4_455 ? 10 AC2 7 LEU A 44 ? LEU A 41 . ? 4_455 ? 11 AC2 7 ASN A 51 ? ASN A 48 . ? 1_555 ? 12 AC2 7 HOH H . ? HOH A 305 . ? 4_455 ? 13 AC3 4 THR A 113 ? THR A 110 . ? 1_555 ? 14 AC3 4 ASP A 117 ? ASP A 114 . ? 1_555 ? 15 AC3 4 LEU A 118 ? LEU A 115 . ? 1_555 ? 16 AC3 4 HOH H . ? HOH A 301 . ? 1_555 ? 17 AC4 7 ARG A 18 ? ARG A 15 . ? 1_555 ? 18 AC4 7 TYR A 111 ? TYR A 108 . ? 1_555 ? 19 AC4 7 ARG A 112 ? ARG A 109 . ? 1_555 ? 20 AC4 7 THR A 113 ? THR A 110 . ? 1_555 ? 21 AC4 7 ALA A 114 ? ALA A 111 . ? 1_555 ? 22 AC4 7 HOH H . ? HOH A 317 . ? 3_555 ? 23 AC4 7 HOH H . ? HOH A 361 . ? 3_545 ? 24 AC5 5 ASN A 47 ? ASN A 44 . ? 1_555 ? 25 AC5 5 TRP A 48 ? TRP A 45 . ? 1_555 ? 26 AC5 5 LYS A 105 ? LYS A 102 . ? 1_555 ? 27 AC5 5 ILE A 106 ? ILE A 103 . ? 1_555 ? 28 AC5 5 HOH H . ? HOH A 303 . ? 4_455 ? 29 AC6 7 ASP A 25 ? ASP A 22 . ? 3_555 ? 30 AC6 7 LYS A 58 ? LYS A 55 . ? 1_555 ? 31 AC6 7 LYS A 96 ? LYS A 93 . ? 1_555 ? 32 AC6 7 ILE A 109 ? ILE A 106 . ? 1_555 ? 33 AC6 7 HOH H . ? HOH A 356 . ? 1_555 ? 34 AC6 7 HOH H . ? HOH A 362 . ? 1_555 ? 35 AC6 7 HOH H . ? HOH A 421 . ? 1_555 ? # _database_PDB_matrix.entry_id 3FZ4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FZ4 _atom_sites.fract_transf_matrix[1][1] 0.031390 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024180 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013022 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 LEU 5 2 2 LEU LEU A . n A 1 6 THR 6 3 3 THR THR A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 TYR 8 5 5 TYR TYR A . n A 1 9 GLU 9 6 6 GLU GLU A . n A 1 10 TYR 10 7 7 TYR TYR A . n A 1 11 PRO 11 8 8 PRO PRO A . n A 1 12 LYS 12 9 9 LYS LYS A . n A 1 13 CYS 13 10 10 CYS CYS A . n A 1 14 SER 14 11 11 SER SER A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 CYS 16 13 13 CYS CYS A . n A 1 17 ARG 17 14 14 ARG ARG A . n A 1 18 ARG 18 15 15 ARG ARG A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 LYS 20 17 17 LYS LYS A . n A 1 21 ALA 21 18 18 ALA ALA A . n A 1 22 GLU 22 19 19 GLU GLU A . n A 1 23 LEU 23 20 20 LEU LEU A . n A 1 24 ASP 24 21 21 ASP ASP A . n A 1 25 ASP 25 22 22 ASP ASP A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 TRP 28 25 25 TRP TRP A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 TYR 30 27 27 TYR TYR A . n A 1 31 ASP 31 28 28 ASP ASP A . n A 1 32 ALA 32 29 29 ALA ALA A . n A 1 33 ILE 33 30 30 ILE ILE A . n A 1 34 ASP 34 31 31 ASP ASP A . n A 1 35 ILE 35 32 32 ILE ILE A . n A 1 36 LYS 36 33 33 LYS LYS A . n A 1 37 LYS 37 34 34 LYS LYS A . n A 1 38 ASN 38 35 35 ASN ASN A . n A 1 39 PRO 39 36 36 PRO PRO A . n A 1 40 PRO 40 37 37 PRO PRO A . n A 1 41 ALA 41 38 38 ALA ALA A . n A 1 42 ALA 42 39 39 ALA ALA A . n A 1 43 SER 43 40 40 SER SER A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 ILE 45 42 42 ILE ILE A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 TRP 48 45 45 TRP TRP A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 GLU 50 47 47 GLU GLU A . n A 1 51 ASN 51 48 48 ASN ASN A . n A 1 52 SER 52 49 49 SER SER A . n A 1 53 GLY 53 50 50 GLY GLY A . n A 1 54 LEU 54 51 51 LEU LEU A . n A 1 55 GLU 55 52 52 GLU GLU A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 LYS 57 54 54 LYS LYS A . n A 1 58 LYS 58 55 55 LYS LYS A . n A 1 59 PHE 59 56 56 PHE PHE A . n A 1 60 PHE 60 57 57 PHE PHE A . n A 1 61 ASN 61 58 58 ASN ASN A . n A 1 62 THR 62 59 59 THR THR A . n A 1 63 SER 63 60 60 SER SER A . n A 1 64 GLY 64 61 61 GLY GLY A . n A 1 65 GLN 65 62 62 GLN GLN A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 TYR 67 64 64 TYR TYR A . n A 1 68 ARG 68 65 65 ARG ARG A . n A 1 69 ALA 69 66 66 ALA ALA A . n A 1 70 LEU 70 67 67 LEU LEU A . n A 1 71 GLY 71 68 68 GLY GLY A . n A 1 72 LEU 72 69 69 LEU LEU A . n A 1 73 LYS 73 70 70 LYS LYS A . n A 1 74 ASP 74 71 71 ASP ASP A . n A 1 75 LYS 75 72 72 LYS LYS A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 HIS 77 74 74 HIS HIS A . n A 1 78 GLN 78 75 75 GLN GLN A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 SER 80 77 77 SER SER A . n A 1 81 LEU 81 78 78 LEU LEU A . n A 1 82 ASP 82 79 79 ASP ASP A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 ALA 84 81 81 ALA ALA A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 ASN 86 83 83 ASN ASN A . n A 1 87 LEU 87 84 84 LEU LEU A . n A 1 88 LEU 88 85 85 LEU LEU A . n A 1 89 ALA 89 86 86 ALA ALA A . n A 1 90 SER 90 87 87 SER SER A . n A 1 91 ASP 91 88 88 ASP ASP A . n A 1 92 GLY 92 89 89 GLY GLY A . n A 1 93 MSE 93 90 90 MSE MSE A . n A 1 94 LEU 94 91 91 LEU LEU A . n A 1 95 ILE 95 92 92 ILE ILE A . n A 1 96 LYS 96 93 93 LYS LYS A . n A 1 97 ARG 97 94 94 ARG ARG A . n A 1 98 PRO 98 95 95 PRO PRO A . n A 1 99 LEU 99 96 96 LEU LEU A . n A 1 100 LEU 100 97 97 LEU LEU A . n A 1 101 VAL 101 98 98 VAL VAL A . n A 1 102 LYS 102 99 99 LYS LYS A . n A 1 103 GLU 103 100 100 GLU GLU A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 LYS 105 102 102 LYS LYS A . n A 1 106 ILE 106 103 103 ILE ILE A . n A 1 107 VAL 107 104 104 VAL VAL A . n A 1 108 GLN 108 105 105 GLN GLN A . n A 1 109 ILE 109 106 106 ILE ILE A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 TYR 111 108 108 TYR TYR A . n A 1 112 ARG 112 109 109 ARG ARG A . n A 1 113 THR 113 110 110 THR THR A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 TYR 115 112 112 TYR TYR A . n A 1 116 GLU 116 113 113 GLU GLU A . n A 1 117 ASP 117 114 114 ASP ASP A . n A 1 118 LEU 118 115 115 LEU LEU A . n A 1 119 ASP 119 116 116 ASP ASP A . n A 1 120 PHE 120 117 117 PHE PHE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 201 1 NA NA A . C 3 EDO 1 202 1 EDO EDO A . D 4 FMT 1 203 1 FMT FMT A . E 4 FMT 1 204 2 FMT FMT A . F 4 FMT 1 205 3 FMT FMT A . G 4 FMT 1 206 4 FMT FMT A . H 5 HOH 1 301 1 HOH HOH A . H 5 HOH 2 302 2 HOH HOH A . H 5 HOH 3 303 3 HOH HOH A . H 5 HOH 4 304 4 HOH HOH A . H 5 HOH 5 305 5 HOH HOH A . H 5 HOH 6 306 6 HOH HOH A . H 5 HOH 7 307 7 HOH HOH A . H 5 HOH 8 308 8 HOH HOH A . H 5 HOH 9 309 9 HOH HOH A . H 5 HOH 10 310 10 HOH HOH A . H 5 HOH 11 311 11 HOH HOH A . H 5 HOH 12 312 12 HOH HOH A . H 5 HOH 13 313 13 HOH HOH A . H 5 HOH 14 314 14 HOH HOH A . H 5 HOH 15 315 15 HOH HOH A . H 5 HOH 16 316 16 HOH HOH A . H 5 HOH 17 317 17 HOH HOH A . H 5 HOH 18 318 18 HOH HOH A . H 5 HOH 19 319 19 HOH HOH A . H 5 HOH 20 320 20 HOH HOH A . H 5 HOH 21 321 21 HOH HOH A . H 5 HOH 22 322 22 HOH HOH A . H 5 HOH 23 323 23 HOH HOH A . H 5 HOH 24 324 24 HOH HOH A . H 5 HOH 25 325 25 HOH HOH A . H 5 HOH 26 326 26 HOH HOH A . H 5 HOH 27 327 27 HOH HOH A . H 5 HOH 28 328 28 HOH HOH A . H 5 HOH 29 329 29 HOH HOH A . H 5 HOH 30 330 30 HOH HOH A . H 5 HOH 31 331 31 HOH HOH A . H 5 HOH 32 332 32 HOH HOH A . H 5 HOH 33 333 33 HOH HOH A . H 5 HOH 34 334 34 HOH HOH A . H 5 HOH 35 335 35 HOH HOH A . H 5 HOH 36 336 36 HOH HOH A . H 5 HOH 37 337 37 HOH HOH A . H 5 HOH 38 338 38 HOH HOH A . H 5 HOH 39 339 39 HOH HOH A . H 5 HOH 40 340 40 HOH HOH A . H 5 HOH 41 341 41 HOH HOH A . H 5 HOH 42 342 42 HOH HOH A . H 5 HOH 43 343 43 HOH HOH A . H 5 HOH 44 344 44 HOH HOH A . H 5 HOH 45 345 45 HOH HOH A . H 5 HOH 46 346 46 HOH HOH A . H 5 HOH 47 347 47 HOH HOH A . H 5 HOH 48 348 48 HOH HOH A . H 5 HOH 49 349 49 HOH HOH A . H 5 HOH 50 350 50 HOH HOH A . H 5 HOH 51 351 51 HOH HOH A . H 5 HOH 52 352 52 HOH HOH A . H 5 HOH 53 353 53 HOH HOH A . H 5 HOH 54 354 54 HOH HOH A . H 5 HOH 55 355 55 HOH HOH A . H 5 HOH 56 356 56 HOH HOH A . H 5 HOH 57 357 57 HOH HOH A . H 5 HOH 58 358 58 HOH HOH A . H 5 HOH 59 359 59 HOH HOH A . H 5 HOH 60 360 60 HOH HOH A . H 5 HOH 61 361 61 HOH HOH A . H 5 HOH 62 362 62 HOH HOH A . H 5 HOH 63 363 63 HOH HOH A . H 5 HOH 64 364 64 HOH HOH A . H 5 HOH 65 365 65 HOH HOH A . H 5 HOH 66 366 66 HOH HOH A . H 5 HOH 67 367 67 HOH HOH A . H 5 HOH 68 368 68 HOH HOH A . H 5 HOH 69 370 70 HOH HOH A . H 5 HOH 70 371 71 HOH HOH A . H 5 HOH 71 372 72 HOH HOH A . H 5 HOH 72 373 73 HOH HOH A . H 5 HOH 73 374 74 HOH HOH A . H 5 HOH 74 375 75 HOH HOH A . H 5 HOH 75 376 76 HOH HOH A . H 5 HOH 76 377 77 HOH HOH A . H 5 HOH 77 378 78 HOH HOH A . H 5 HOH 78 379 79 HOH HOH A . H 5 HOH 79 380 80 HOH HOH A . H 5 HOH 80 381 81 HOH HOH A . H 5 HOH 81 382 82 HOH HOH A . H 5 HOH 82 383 83 HOH HOH A . H 5 HOH 83 384 84 HOH HOH A . H 5 HOH 84 385 85 HOH HOH A . H 5 HOH 85 386 86 HOH HOH A . H 5 HOH 86 387 87 HOH HOH A . H 5 HOH 87 388 88 HOH HOH A . H 5 HOH 88 389 89 HOH HOH A . H 5 HOH 89 390 90 HOH HOH A . H 5 HOH 90 391 91 HOH HOH A . H 5 HOH 91 392 92 HOH HOH A . H 5 HOH 92 393 93 HOH HOH A . H 5 HOH 93 394 94 HOH HOH A . H 5 HOH 94 395 95 HOH HOH A . H 5 HOH 95 396 96 HOH HOH A . H 5 HOH 96 397 97 HOH HOH A . H 5 HOH 97 398 98 HOH HOH A . H 5 HOH 98 399 99 HOH HOH A . H 5 HOH 99 400 100 HOH HOH A . H 5 HOH 100 401 101 HOH HOH A . H 5 HOH 101 402 102 HOH HOH A . H 5 HOH 102 403 103 HOH HOH A . H 5 HOH 103 404 104 HOH HOH A . H 5 HOH 104 405 105 HOH HOH A . H 5 HOH 105 406 106 HOH HOH A . H 5 HOH 106 407 107 HOH HOH A . H 5 HOH 107 408 108 HOH HOH A . H 5 HOH 108 409 109 HOH HOH A . H 5 HOH 109 411 111 HOH HOH A . H 5 HOH 110 412 112 HOH HOH A . H 5 HOH 111 413 113 HOH HOH A . H 5 HOH 112 414 114 HOH HOH A . H 5 HOH 113 415 115 HOH HOH A . H 5 HOH 114 416 116 HOH HOH A . H 5 HOH 115 417 117 HOH HOH A . H 5 HOH 116 418 118 HOH HOH A . H 5 HOH 117 419 119 HOH HOH A . H 5 HOH 118 420 120 HOH HOH A . H 5 HOH 119 421 121 HOH HOH A . H 5 HOH 120 422 122 HOH HOH A . H 5 HOH 121 423 123 HOH HOH A . H 5 HOH 122 424 124 HOH HOH A . H 5 HOH 123 425 125 HOH HOH A . H 5 HOH 124 426 126 HOH HOH A . H 5 HOH 125 427 127 HOH HOH A . H 5 HOH 126 428 128 HOH HOH A . H 5 HOH 127 429 129 HOH HOH A . H 5 HOH 128 430 130 HOH HOH A . H 5 HOH 129 431 131 HOH HOH A . H 5 HOH 130 432 132 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 93 A MSE 90 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLN 108 ? A GLN 105 ? 1_555 NA ? B NA . ? A NA 201 ? 1_555 O ? A GLY 110 ? A GLY 107 ? 1_555 108.6 ? 2 O ? A GLN 108 ? A GLN 105 ? 1_555 NA ? B NA . ? A NA 201 ? 1_555 OH ? A TYR 115 ? A TYR 112 ? 1_555 137.5 ? 3 O ? A GLY 110 ? A GLY 107 ? 1_555 NA ? B NA . ? A NA 201 ? 1_555 OH ? A TYR 115 ? A TYR 112 ? 1_555 107.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 RESOLVE 'model building' . ? 5 HKL-3000 phasing . ? 6 REFMAC refinement 5.5.0054 ? 7 HKL-3000 'data reduction' . ? 8 HKL-3000 'data scaling' . ? 9 DM phasing . ? 10 RESOLVE phasing . ? 11 # _pdbx_entry_details.entry_id 3FZ4 _pdbx_entry_details.sequence_details 'D101G IS A PCR MUTATION.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 108 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -142.96 _pdbx_validate_torsion.psi 56.70 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id -2 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 1,2-ETHANEDIOL EDO 4 'FORMIC ACID' FMT 5 water HOH #