HEADER HYDROLASE 13-FEB-09 3G9D TITLE CRYSTAL STRUCTURE GLYCOHYDROLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DINITROGENASE REDUCTASE ACTIVATING GLUCOHYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADP-RIBOSYLHYDROLASE; COMPND 5 EC: 3.2.2.24; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AZOSPIRILLUM BRASILENSE; SOURCE 3 ORGANISM_TAXID: 192; SOURCE 4 STRAIN: FP2; SOURCE 5 GENE: DRAG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PLHPET KEYWDS NITROGENASE, DRAG, ADP-RIBOSYLATION, POSTTRANSLATIONAL MODIFICATION, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.-D.LI,F.K.WINKLER REVDAT 3 01-NOV-23 3G9D 1 REMARK LINK REVDAT 2 19-JAN-10 3G9D 1 REMARK REVDAT 1 14-JUL-09 3G9D 0 JRNL AUTH X.-D.LI,L.F.HUERGO,A.GASPERINA,F.O.PEDROSA,M.MERRICK, JRNL AUTH 2 F.K.WINKLER JRNL TITL CRYSTAL STRUCTURE OF DINITROGENASE REDUCTASE-ACTIVATING JRNL TITL 2 GLYCOHYDROLASE (DRAG) REVEALS CONSERVATION IN THE JRNL TITL 3 ADP-RIBOSYLHYDROLASE FOLD AND SPECIFIC FEATURES IN THE JRNL TITL 4 ADP-RIBOSE-BINDING POCKET JRNL REF J.MOL.BIOL. V. 390 737 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19477184 JRNL DOI 10.1016/J.JMB.2009.05.031 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : -3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 23135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2756 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4443 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 71 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.55000 REMARK 3 B22 (A**2) : -0.55000 REMARK 3 B33 (A**2) : 0.83000 REMARK 3 B12 (A**2) : -0.28000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.482 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.232 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.707 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.879 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4533 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6148 ; 1.193 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 577 ; 5.374 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 206 ;36.494 ;22.767 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 727 ;19.725 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;15.188 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 686 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3466 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2564 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3176 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 242 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.073 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 72 ; 0.164 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.287 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2912 ; 1.995 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4549 ; 3.357 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1820 ; 5.704 ; 4.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1599 ; 8.203 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051587. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24409 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.11800 REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : 0.36500 REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 2CWC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, PH7.5, 15% PEG 20000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.84933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.42467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.13700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 7.71233 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.56167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASP A 3 REMARK 465 HIS A 4 REMARK 465 LYS A 295 REMARK 465 GLN A 296 REMARK 465 GLY A 297 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASP B 3 REMARK 465 GLU B 119 REMARK 465 LYS B 295 REMARK 465 GLN B 296 REMARK 465 GLY B 297 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 29 -12.51 78.86 REMARK 500 LYS A 43 -12.70 -140.35 REMARK 500 THR A 59 -156.19 -96.81 REMARK 500 VAL A 94 77.19 62.64 REMARK 500 PRO A 95 172.25 -58.13 REMARK 500 LEU A 140 105.83 -55.98 REMARK 500 THR A 157 -38.38 -134.97 REMARK 500 LEU A 179 21.95 -79.95 REMARK 500 PHE B 29 -18.05 84.40 REMARK 500 TYR B 39 -20.86 -142.52 REMARK 500 VAL B 58 -169.16 -100.62 REMARK 500 VAL B 94 86.67 52.42 REMARK 500 TYR B 122 50.39 -64.19 REMARK 500 LEU B 140 105.77 -57.60 REMARK 500 THR B 157 -37.07 -130.25 REMARK 500 ALA B 289 1.46 -69.51 REMARK 500 PRO B 292 65.24 -45.15 REMARK 500 ALA B 293 62.82 -152.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 299 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 28 OE2 REMARK 620 2 ASP A 243 OD1 125.8 REMARK 620 3 ASP A 245 OD1 82.1 88.8 REMARK 620 4 HOH A 333 O 94.5 136.6 80.9 REMARK 620 5 HOH A 334 O 144.7 74.4 130.7 80.9 REMARK 620 6 HOH A 338 O 62.9 62.9 78.0 150.8 128.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 298 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 59 OG1 REMARK 620 2 ASP A 60 OD1 82.3 REMARK 620 3 ASP A 61 OD1 68.9 84.6 REMARK 620 4 ASP A 245 OD2 75.0 156.8 82.8 REMARK 620 5 HOH A 333 O 150.1 104.2 82.5 93.4 REMARK 620 6 HOH A 335 O 91.3 104.9 157.0 80.7 114.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 299 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 60 OD1 REMARK 620 2 ASP B 61 OD1 82.7 REMARK 620 3 ASP B 245 OD2 160.0 82.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 298 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 243 OD1 REMARK 620 2 HOH B 327 O 81.1 REMARK 620 3 HOH B 330 O 138.4 67.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 298 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 299 DBREF 3G9D A 1 297 UNP A7XNI2 A7XNI2_AZOBR 1 297 DBREF 3G9D B 1 297 UNP A7XNI2 A7XNI2_AZOBR 1 297 SEQRES 1 A 297 MET THR ASP HIS SER ILE ARG SER ARG ALA LEU GLY ALA SEQRES 2 A 297 TYR LEU GLY LEU ALA CYS GLY ASP ALA LEU GLY ALA THR SEQRES 3 A 297 VAL GLU PHE LEU THR LYS GLY GLU ILE ALA HIS GLN TYR SEQRES 4 A 297 GLY VAL HIS LYS HIS ILE LYS GLY GLY GLY TRP LEU LYS SEQRES 5 A 297 LEU PRO ALA GLY GLN VAL THR ASP ASP THR GLU MET SER SEQRES 6 A 297 ILE HIS LEU GLY ARG ALA ILE LEU ALA ALA PRO GLU TRP SEQRES 7 A 297 ASP ALA ARG ARG ALA ALA GLU GLU PHE ALA VAL TRP LEU SEQRES 8 A 297 LYS GLY VAL PRO VAL ASP VAL GLY ASP THR THR ARG ARG SEQRES 9 A 297 GLY ILE ARG ARG PHE ILE MET HIS GLY THR LEU SER GLU SEQRES 10 A 297 PRO GLU SER GLU TYR HIS ALA GLY ASN GLY ALA ALA MET SEQRES 11 A 297 ARG ASN LEU PRO VAL ALA LEU ALA THR LEU GLY ASP ASP SEQRES 12 A 297 ALA ALA PHE GLU ARG TRP THR VAL GLU GLN ALA HIS ILE SEQRES 13 A 297 THR HIS CYS ASN ALA MET SER ASP ALA ALA THR LEU THR SEQRES 14 A 297 LEU GLY HIS MET VAL ARG ARG LEU VAL LEU GLY GLY ASP SEQRES 15 A 297 VAL ARG ASP VAL ARG ASP GLU SER ASN LYS LEU ILE ALA SEQRES 16 A 297 LYS HIS ARG GLN PHE LYS PHE GLN PRO TYR ARG GLY LEU SEQRES 17 A 297 ALA THR ALA TYR ILE VAL ASP THR MET GLN THR VAL MET SEQRES 18 A 297 HIS TYR TYR PHE GLN THR ASP SER VAL GLU SER CYS VAL SEQRES 19 A 297 VAL GLU THR VAL ASN GLN GLY GLY ASP ALA ASP THR THR SEQRES 20 A 297 GLY ALA ILE ALA GLY MET LEU ALA GLY ALA THR TYR GLY SEQRES 21 A 297 VAL GLU THR ILE PRO PRO ARG TRP LEU ARG LYS LEU ASP SEQRES 22 A 297 ARG ASP VAL TYR ASN GLU ILE CYS ALA GLN VAL ASP GLY SEQRES 23 A 297 LEU LEU ALA ARG ALA PRO ALA LEU LYS GLN GLY SEQRES 1 B 297 MET THR ASP HIS SER ILE ARG SER ARG ALA LEU GLY ALA SEQRES 2 B 297 TYR LEU GLY LEU ALA CYS GLY ASP ALA LEU GLY ALA THR SEQRES 3 B 297 VAL GLU PHE LEU THR LYS GLY GLU ILE ALA HIS GLN TYR SEQRES 4 B 297 GLY VAL HIS LYS HIS ILE LYS GLY GLY GLY TRP LEU LYS SEQRES 5 B 297 LEU PRO ALA GLY GLN VAL THR ASP ASP THR GLU MET SER SEQRES 6 B 297 ILE HIS LEU GLY ARG ALA ILE LEU ALA ALA PRO GLU TRP SEQRES 7 B 297 ASP ALA ARG ARG ALA ALA GLU GLU PHE ALA VAL TRP LEU SEQRES 8 B 297 LYS GLY VAL PRO VAL ASP VAL GLY ASP THR THR ARG ARG SEQRES 9 B 297 GLY ILE ARG ARG PHE ILE MET HIS GLY THR LEU SER GLU SEQRES 10 B 297 PRO GLU SER GLU TYR HIS ALA GLY ASN GLY ALA ALA MET SEQRES 11 B 297 ARG ASN LEU PRO VAL ALA LEU ALA THR LEU GLY ASP ASP SEQRES 12 B 297 ALA ALA PHE GLU ARG TRP THR VAL GLU GLN ALA HIS ILE SEQRES 13 B 297 THR HIS CYS ASN ALA MET SER ASP ALA ALA THR LEU THR SEQRES 14 B 297 LEU GLY HIS MET VAL ARG ARG LEU VAL LEU GLY GLY ASP SEQRES 15 B 297 VAL ARG ASP VAL ARG ASP GLU SER ASN LYS LEU ILE ALA SEQRES 16 B 297 LYS HIS ARG GLN PHE LYS PHE GLN PRO TYR ARG GLY LEU SEQRES 17 B 297 ALA THR ALA TYR ILE VAL ASP THR MET GLN THR VAL MET SEQRES 18 B 297 HIS TYR TYR PHE GLN THR ASP SER VAL GLU SER CYS VAL SEQRES 19 B 297 VAL GLU THR VAL ASN GLN GLY GLY ASP ALA ASP THR THR SEQRES 20 B 297 GLY ALA ILE ALA GLY MET LEU ALA GLY ALA THR TYR GLY SEQRES 21 B 297 VAL GLU THR ILE PRO PRO ARG TRP LEU ARG LYS LEU ASP SEQRES 22 B 297 ARG ASP VAL TYR ASN GLU ILE CYS ALA GLN VAL ASP GLY SEQRES 23 B 297 LEU LEU ALA ARG ALA PRO ALA LEU LYS GLN GLY HET MG A 298 1 HET MG A 299 1 HET MG B 298 1 HET MG B 299 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 4(MG 2+) FORMUL 7 HOH *71(H2 O) HELIX 1 1 SER A 5 ALA A 25 1 21 HELIX 2 2 THR A 31 TYR A 39 1 9 HELIX 3 3 THR A 59 LEU A 73 1 15 HELIX 4 4 ASP A 79 LYS A 92 1 14 HELIX 5 5 GLY A 99 GLY A 113 1 15 HELIX 6 6 SER A 120 ALA A 124 5 5 HELIX 7 7 ALA A 128 ARG A 131 5 4 HELIX 8 8 ASN A 132 THR A 139 1 8 HELIX 9 9 ASP A 142 HIS A 155 1 14 HELIX 10 10 ASN A 160 LEU A 179 1 20 HELIX 11 11 ASP A 182 HIS A 197 1 16 HELIX 12 12 ARG A 198 LYS A 201 5 4 HELIX 13 13 TYR A 212 PHE A 225 1 14 HELIX 14 14 SER A 229 ASN A 239 1 11 HELIX 15 15 ASP A 243 GLY A 260 1 18 HELIX 16 16 VAL A 261 ILE A 264 5 4 HELIX 17 17 PRO A 265 LEU A 272 1 8 HELIX 18 18 ASP A 273 ALA A 289 1 17 HELIX 19 19 SER B 5 THR B 26 1 22 HELIX 20 20 THR B 31 GLY B 40 1 10 HELIX 21 21 GLY B 48 LYS B 52 5 5 HELIX 22 22 THR B 59 ALA B 75 1 17 HELIX 23 23 ASP B 79 GLY B 93 1 15 HELIX 24 24 GLY B 99 GLY B 113 1 15 HELIX 25 25 GLY B 127 ARG B 131 5 5 HELIX 26 26 ASN B 132 THR B 139 1 8 HELIX 27 27 ASP B 142 HIS B 155 1 14 HELIX 28 28 ASN B 160 LEU B 179 1 20 HELIX 29 29 ASP B 182 HIS B 197 1 16 HELIX 30 30 ARG B 198 LYS B 201 5 4 HELIX 31 31 TYR B 212 GLN B 226 1 15 HELIX 32 32 SER B 229 ASN B 239 1 11 HELIX 33 33 ASP B 243 GLY B 260 1 18 HELIX 34 34 VAL B 261 ILE B 264 5 4 HELIX 35 35 PRO B 265 LEU B 272 1 8 HELIX 36 36 ASP B 273 ALA B 289 1 17 LINK OE2 GLU A 28 MG MG A 299 1555 1555 2.38 LINK OG1 THR A 59 MG MG A 298 1555 1555 2.49 LINK OD1 ASP A 60 MG MG A 298 1555 1555 1.89 LINK OD1 ASP A 61 MG MG A 298 1555 1555 2.47 LINK OD1 ASP A 243 MG MG A 299 1555 1555 2.15 LINK OD2 ASP A 245 MG MG A 298 1555 1555 1.88 LINK OD1 ASP A 245 MG MG A 299 1555 1555 2.25 LINK MG MG A 298 O HOH A 333 1555 1555 1.96 LINK MG MG A 298 O HOH A 335 1555 1555 1.95 LINK MG MG A 299 O HOH A 333 1555 1555 1.98 LINK MG MG A 299 O HOH A 334 1555 1555 2.27 LINK MG MG A 299 O HOH A 338 1555 1555 2.36 LINK OD1 ASP B 60 MG MG B 299 1555 1555 2.12 LINK OD1 ASP B 61 MG MG B 299 1555 1555 2.30 LINK OD1 ASP B 243 MG MG B 298 1555 1555 2.16 LINK OD2 ASP B 245 MG MG B 299 1555 1555 2.06 LINK MG MG B 298 O HOH B 327 1555 1555 2.21 LINK MG MG B 298 O HOH B 330 1555 1555 2.40 CISPEP 1 GLN A 203 PRO A 204 0 -5.63 CISPEP 2 GLN B 203 PRO B 204 0 -1.38 SITE 1 AC1 8 GLU A 28 THR A 59 ASP A 60 ASP A 61 SITE 2 AC1 8 ASP A 245 MG A 299 HOH A 333 HOH A 335 SITE 1 AC2 8 GLU A 28 ASP A 243 ASP A 245 THR A 246 SITE 2 AC2 8 MG A 298 HOH A 333 HOH A 334 HOH A 338 SITE 1 AC3 7 GLU B 28 ASP B 243 ASP B 245 THR B 246 SITE 2 AC3 7 MG B 299 HOH B 327 HOH B 330 SITE 1 AC4 7 THR B 59 ASP B 60 ASP B 61 ASP B 97 SITE 2 AC4 7 ASP B 245 MG B 298 HOH B 330 CRYST1 163.866 163.866 46.274 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006103 0.003523 0.000000 0.00000 SCALE2 0.000000 0.007047 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021610 0.00000