HEADER HYDROLASE 18-FEB-09 3GB0 TITLE CRYSTAL STRUCTURE OF AMINOPEPTIDASE PEPT (NP_980509.1) FROM BACILLUS TITLE 2 CEREUS ATCC 10987 AT 2.04 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE T; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.11.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 10987; SOURCE 3 ORGANISM_TAXID: 222523; SOURCE 4 ATCC: 10987; SOURCE 5 GENE: BCE_4216, NP_980509.1, PEPT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_980509.1, AMINOPEPTIDASE PEPT, PEPTIDASE FAMILY M20/M25/M40, KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-2, AMINOPEPTIDASE, HYDROLASE, KEYWDS 4 METAL-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3GB0 1 REMARK SEQADV REVDAT 4 24-JUL-19 3GB0 1 REMARK LINK REVDAT 3 01-NOV-17 3GB0 1 REMARK REVDAT 2 13-JUL-11 3GB0 1 VERSN REVDAT 1 03-MAR-09 3GB0 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AMINOPEPTIDASE PEPT (NP_980509.1) FROM JRNL TITL 2 BACILLUS CEREUS ATCC 10987 AT 2.04 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0053 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 26590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1340 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1833 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2761 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 25.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.65000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.28000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.698 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2866 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1887 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3872 ; 1.635 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4659 ; 0.957 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 4.046 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;30.442 ;25.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 486 ;10.344 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ; 9.757 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 457 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3205 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 514 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1854 ; 1.765 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 776 ; 0.513 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2990 ; 2.774 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1012 ; 5.531 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 879 ; 7.882 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 372 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5085 47.4294 22.1964 REMARK 3 T TENSOR REMARK 3 T11: 0.0065 T22: 0.0108 REMARK 3 T33: 0.0178 T12: 0.0005 REMARK 3 T13: 0.0069 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.4776 L22: 0.1956 REMARK 3 L33: 0.4460 L12: 0.1350 REMARK 3 L13: 0.2214 L23: 0.0577 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.0066 S13: 0.0450 REMARK 3 S21: 0.0227 S22: -0.0115 S23: 0.0073 REMARK 3 S31: -0.0201 S32: 0.0031 S33: -0.0008 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS REMARK 3 ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE REMARK 3 ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED REMARK 3 SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. GLYCEROL REMARK 3 (GOL) AND POLYETHYLENE GLYCOL (PEG) FRAGMENTS FROM THE REMARK 3 CRYSTALLIZATION CONDITION HAVE BEEN MODELED IN THE SOLVENT REMARK 3 STRUCTURE. 5. RESIDUES ASP107-ASP108 FORM A CIS-PEPTIDE WHICH IS REMARK 3 SUPPORTED BY ELECTRON DENSITY. THIS IS IN THE PUTATIVE ACTIVE REMARK 3 SITE AND MAY BE FUNCTIONALLY RELEVANT INDICATING THE POSSIBILITY REMARK 3 OF CARBOHYDRATE BINDING. REMARK 4 REMARK 4 3GB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91162, 0.97959 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26596 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 29.463 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.55600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 10.0% GLYCEROL, 5.0% PEG REMARK 280 1000, 30.0% PEG 600, 0.1M MES PH 6.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.65550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.07350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.65550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.07350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THAT A DIMER IS THE REMARK 300 STABLE OLIGOMERIC FORM IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 22 CE NZ REMARK 470 LYS A 88 CD CE NZ REMARK 470 LYS A 92 CD CE NZ REMARK 470 LYS A 189 CD CE NZ REMARK 470 LYS A 199 CE NZ REMARK 470 LYS A 273 CD CE NZ REMARK 470 LYS A 308 NZ REMARK 470 LYS A 372 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 55.68 -146.12 REMARK 500 LYS A 22 -18.94 91.38 REMARK 500 PHE A 23 50.12 -119.12 REMARK 500 ASP A 46 41.80 -109.55 REMARK 500 LEU A 163 67.59 -111.63 REMARK 500 ASP A 164 56.90 -157.89 REMARK 500 VAL A 195 -67.41 -90.08 REMARK 500 THR A 234 -64.92 -120.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 373 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 374 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 375 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 377 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 378 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 379 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 375071 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3GB0 A 1 372 UNP Q731F0 Q731F0_BACC1 1 372 SEQADV 3GB0 GLY A 0 UNP Q731F0 EXPRESSION TAG SEQRES 1 A 373 GLY MSE ILE ASN GLN GLU ARG LEU VAL ASN GLU PHE MSE SEQRES 2 A 373 GLU LEU VAL GLN VAL ASP SER GLU THR LYS PHE GLU ALA SEQRES 3 A 373 GLU ILE CYS LYS VAL LEU THR LYS LYS PHE THR ASP LEU SEQRES 4 A 373 GLY VAL GLU VAL PHE GLU ASP ASP THR MSE ALA VAL THR SEQRES 5 A 373 GLY HIS GLY ALA GLY ASN LEU ILE CYS THR LEU PRO ALA SEQRES 6 A 373 THR LYS ASP GLY VAL ASP THR ILE TYR PHE THR SER HIS SEQRES 7 A 373 MSE ASP THR VAL VAL PRO GLY ASN GLY ILE LYS PRO SER SEQRES 8 A 373 ILE LYS ASP GLY TYR ILE VAL SER ASP GLY THR THR ILE SEQRES 9 A 373 LEU GLY ALA ASP ASP LYS ALA GLY LEU ALA SER MSE PHE SEQRES 10 A 373 GLU ALA ILE ARG VAL LEU LYS GLU LYS ASN ILE PRO HIS SEQRES 11 A 373 GLY THR ILE GLU PHE ILE ILE THR VAL GLY GLU GLU SER SEQRES 12 A 373 GLY LEU VAL GLY ALA LYS ALA LEU ASP ARG GLU ARG ILE SEQRES 13 A 373 THR ALA LYS TYR GLY TYR ALA LEU ASP SER ASP GLY LYS SEQRES 14 A 373 VAL GLY GLU ILE VAL VAL ALA ALA PRO THR GLN ALA LYS SEQRES 15 A 373 VAL ASN ALA ILE ILE ARG GLY LYS THR ALA HIS ALA GLY SEQRES 16 A 373 VAL ALA PRO GLU LYS GLY VAL SER ALA ILE THR ILE ALA SEQRES 17 A 373 ALA LYS ALA ILE ALA LYS MSE PRO LEU GLY ARG ILE ASP SEQRES 18 A 373 SER GLU THR THR ALA ASN ILE GLY ARG PHE GLU GLY GLY SEQRES 19 A 373 THR GLN THR ASN ILE VAL CYS ASP HIS VAL GLN ILE PHE SEQRES 20 A 373 ALA GLU ALA ARG SER LEU ILE ASN GLU LYS MSE GLU ALA SEQRES 21 A 373 GLN VAL ALA LYS MSE LYS GLU ALA PHE GLU THR THR ALA SEQRES 22 A 373 LYS GLU MSE GLY GLY HIS ALA ASP VAL GLU VAL ASN VAL SEQRES 23 A 373 MSE TYR PRO GLY PHE LYS PHE ALA ASP GLY ASP HIS VAL SEQRES 24 A 373 VAL GLU VAL ALA LYS ARG ALA ALA GLU LYS ILE GLY ARG SEQRES 25 A 373 THR PRO SER LEU HIS GLN SER GLY GLY GLY SER ASP ALA SEQRES 26 A 373 ASN VAL ILE ALA GLY HIS GLY ILE PRO THR VAL ASN LEU SEQRES 27 A 373 ALA VAL GLY TYR GLU GLU ILE HIS THR THR ASN GLU LYS SEQRES 28 A 373 ILE PRO VAL GLU GLU LEU ALA LYS THR ALA GLU LEU VAL SEQRES 29 A 373 VAL ALA ILE ILE GLU GLU VAL ALA LYS MODRES 3GB0 MSE A 1 MET SELENOMETHIONINE MODRES 3GB0 MSE A 12 MET SELENOMETHIONINE MODRES 3GB0 MSE A 48 MET SELENOMETHIONINE MODRES 3GB0 MSE A 78 MET SELENOMETHIONINE MODRES 3GB0 MSE A 115 MET SELENOMETHIONINE MODRES 3GB0 MSE A 214 MET SELENOMETHIONINE MODRES 3GB0 MSE A 257 MET SELENOMETHIONINE MODRES 3GB0 MSE A 264 MET SELENOMETHIONINE MODRES 3GB0 MSE A 275 MET SELENOMETHIONINE MODRES 3GB0 MSE A 286 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 12 8 HET MSE A 48 8 HET MSE A 78 8 HET MSE A 115 8 HET MSE A 214 8 HET MSE A 257 8 HET MSE A 264 8 HET MSE A 275 8 HET MSE A 286 8 HET GOL A 373 6 HET GOL A 374 6 HET GOL A 375 6 HET GOL A 376 6 HET PEG A 377 7 HET PEG A 378 7 HET PEG A 379 7 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 2 GOL 4(C3 H8 O3) FORMUL 6 PEG 3(C4 H10 O3) FORMUL 9 HOH *214(H2 O) HELIX 1 1 ASN A 3 GLN A 16 1 14 HELIX 2 2 GLU A 24 LEU A 38 1 15 HELIX 3 3 THR A 47 GLY A 52 1 6 HELIX 4 4 GLY A 105 LYS A 125 1 21 HELIX 5 5 GLY A 139 GLY A 143 5 5 HELIX 6 6 LEU A 144 LEU A 150 1 7 HELIX 7 7 ASP A 151 ILE A 155 5 5 HELIX 8 8 ALA A 196 GLY A 200 5 5 HELIX 9 9 SER A 202 ALA A 212 1 11 HELIX 10 10 ILE A 253 MSE A 275 1 23 HELIX 11 11 ASP A 296 ILE A 309 1 14 HELIX 12 12 SER A 322 HIS A 330 1 9 HELIX 13 13 VAL A 353 LYS A 372 1 20 SHEET 1 A 8 GLU A 41 GLU A 44 0 SHEET 2 A 8 LEU A 58 LEU A 62 -1 O ILE A 59 N PHE A 43 SHEET 3 A 8 ILE A 132 THR A 137 -1 O PHE A 134 N CYS A 60 SHEET 4 A 8 ILE A 72 HIS A 77 1 N PHE A 74 O ILE A 135 SHEET 5 A 8 TYR A 159 SER A 165 1 O LEU A 163 N THR A 75 SHEET 6 A 8 THR A 334 ALA A 338 1 O LEU A 337 N ALA A 162 SHEET 7 A 8 GLU A 171 ALA A 176 -1 N VAL A 173 O ASN A 336 SHEET 8 A 8 PHE A 290 LYS A 291 -1 O PHE A 290 N ALA A 176 SHEET 1 B 8 GLU A 41 GLU A 44 0 SHEET 2 B 8 LEU A 58 LEU A 62 -1 O ILE A 59 N PHE A 43 SHEET 3 B 8 ILE A 132 THR A 137 -1 O PHE A 134 N CYS A 60 SHEET 4 B 8 ILE A 72 HIS A 77 1 N PHE A 74 O ILE A 135 SHEET 5 B 8 TYR A 159 SER A 165 1 O LEU A 163 N THR A 75 SHEET 6 B 8 THR A 334 ALA A 338 1 O LEU A 337 N ALA A 162 SHEET 7 B 8 GLU A 171 ALA A 176 -1 N VAL A 173 O ASN A 336 SHEET 8 B 8 SER A 314 GLN A 317 1 O SER A 314 N ILE A 172 SHEET 1 C 3 SER A 90 LYS A 92 0 SHEET 2 C 3 TYR A 95 VAL A 97 -1 O VAL A 97 N SER A 90 SHEET 3 C 3 LYS A 350 PRO A 352 -1 O ILE A 351 N ILE A 96 SHEET 1 D 5 GLY A 217 ASP A 220 0 SHEET 2 D 5 THR A 223 GLY A 232 -1 O ALA A 225 N GLY A 217 SHEET 3 D 5 HIS A 242 SER A 251 -1 O GLN A 244 N GLU A 231 SHEET 4 D 5 THR A 178 ARG A 187 -1 N THR A 178 O SER A 251 SHEET 5 D 5 HIS A 278 TYR A 287 -1 O GLU A 282 N ASN A 183 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C PHE A 11 N MSE A 12 1555 1555 1.32 LINK C MSE A 12 N GLU A 13 1555 1555 1.33 LINK C THR A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N ALA A 49 1555 1555 1.33 LINK C HIS A 77 N MSE A 78 1555 1555 1.33 LINK C MSE A 78 N ASP A 79 1555 1555 1.34 LINK C SER A 114 N MSE A 115 1555 1555 1.34 LINK C MSE A 115 N PHE A 116 1555 1555 1.34 LINK C LYS A 213 N MSE A 214 1555 1555 1.34 LINK C MSE A 214 N PRO A 215 1555 1555 1.35 LINK C LYS A 256 N MSE A 257 1555 1555 1.33 LINK C MSE A 257 N GLU A 258 1555 1555 1.32 LINK C LYS A 263 N MSE A 264 1555 1555 1.34 LINK C MSE A 264 N LYS A 265 1555 1555 1.33 LINK C GLU A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N GLY A 276 1555 1555 1.33 LINK C VAL A 285 N MSE A 286 1555 1555 1.34 LINK C MSE A 286 N TYR A 287 1555 1555 1.33 CISPEP 1 VAL A 82 PRO A 83 0 -0.50 CISPEP 2 ASP A 107 ASP A 108 0 7.87 SITE 1 AC1 7 GLN A 179 HIS A 192 ASN A 237 ARG A 250 SITE 2 AC1 7 TYR A 287 GLY A 321 HOH A 438 SITE 1 AC2 9 THR A 36 VAL A 40 VAL A 42 PHE A 292 SITE 2 AC2 9 ALA A 328 ILE A 332 PRO A 333 GOL A 375 SITE 3 AC2 9 HOH A 446 SITE 1 AC3 8 GLY A 39 ASN A 254 GLY A 289 GOL A 374 SITE 2 AC3 8 HOH A 396 HOH A 440 HOH A 460 HOH A 533 SITE 1 AC4 5 ASP A 18 SER A 19 GLU A 20 PHE A 23 SITE 2 AC4 5 ASN A 85 SITE 1 AC5 4 GLY A 194 VAL A 195 GLN A 317 SER A 318 SITE 1 AC6 4 ASP A 37 ARG A 152 HIS A 330 HOH A 471 SITE 1 AC7 3 LYS A 92 TYR A 95 LYS A 350 CRYST1 141.311 58.147 51.368 90.00 91.75 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007077 0.000000 0.000216 0.00000 SCALE2 0.000000 0.017198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019476 0.00000