data_3GDX
#
_entry.id 3GDX
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.378
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3GDX pdb_00003gdx 10.2210/pdb3gdx/pdb
NDB PD1257 ? ?
RCSB RCSB051739 ? ?
WWPDB D_1000051739 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 2FMS
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3GDX
_pdbx_database_status.recvd_initial_deposition_date 2009-02-24
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Wilson, S.H.' 1
'Batra, V.K.' 2
'Pedersen, L.C.' 3
#
_citation.id primary
_citation.title
;Alpha,beta-difluoromethylene deoxynucleoside 5'-triphosphates: a convenient synthesis of useful probes for DNA polymerase beta structure and function
;
_citation.journal_abbrev Org.Lett.
_citation.journal_volume 11
_citation.page_first 1883
_citation.page_last 1886
_citation.year 2009
_citation.journal_id_ASTM ?
_citation.country US
_citation.journal_id_ISSN 1523-7060
_citation.journal_id_CSD ?
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 19351147
_citation.pdbx_database_id_DOI 10.1021/ol701755k
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Upton, T.G.' 1 ?
primary 'Kashemirov, B.A.' 2 ?
primary 'McKenna, C.E.' 3 ?
primary 'Goodman, M.F.' 4 ?
primary 'Prakash, G.K.' 5 ?
primary 'Kultyshev, R.' 6 ?
primary 'Batra, V.K.' 7 ?
primary 'Shock, D.D.' 8 ?
primary 'Pedersen, L.C.' 9 ?
primary 'Beard, W.A.' 10 ?
primary 'Wilson, S.H.' 11 ?
#
_cell.entry_id 3GDX
_cell.length_a 50.500
_cell.length_b 79.700
_cell.length_c 55.300
_cell.angle_alpha 90.00
_cell.angle_beta 107.90
_cell.angle_gamma 90.00
_cell.Z_PDB 2
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3GDX
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'DNA polymerase beta' 37182.410 1
'2.7.7.7, 4.2.99.-' ? ? ?
2 polymer syn "5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4853.158 1 ? ?
? ?
3 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'" 3061.004 1 ? ?
? ?
4 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ?
? ?
5 non-polymer syn "5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]thymidine" 516.176 1 ? ?
? ?
6 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ?
? ?
7 non-polymer syn 'SODIUM ION' 22.990 2 ? ?
? ?
8 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ?
? ?
9 water nat water 18.015 277 ? ?
? ?
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no
;TLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIR
QDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKV
DSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKE
YPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYRE
PKDRSE
;
;TLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIR
QDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKV
DSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKE
YPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYRE
PKDRSE
;
A ?
2 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DA)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACAGCGCATCAGC T ?
3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)' GCTGATGCGC P ?
4 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 THR n
1 2 LEU n
1 3 ASN n
1 4 GLY n
1 5 GLY n
1 6 ILE n
1 7 THR n
1 8 ASP n
1 9 MET n
1 10 LEU n
1 11 THR n
1 12 GLU n
1 13 LEU n
1 14 ALA n
1 15 ASN n
1 16 PHE n
1 17 GLU n
1 18 LYS n
1 19 ASN n
1 20 VAL n
1 21 SER n
1 22 GLN n
1 23 ALA n
1 24 ILE n
1 25 HIS n
1 26 LYS n
1 27 TYR n
1 28 ASN n
1 29 ALA n
1 30 TYR n
1 31 ARG n
1 32 LYS n
1 33 ALA n
1 34 ALA n
1 35 SER n
1 36 VAL n
1 37 ILE n
1 38 ALA n
1 39 LYS n
1 40 TYR n
1 41 PRO n
1 42 HIS n
1 43 LYS n
1 44 ILE n
1 45 LYS n
1 46 SER n
1 47 GLY n
1 48 ALA n
1 49 GLU n
1 50 ALA n
1 51 LYS n
1 52 LYS n
1 53 LEU n
1 54 PRO n
1 55 GLY n
1 56 VAL n
1 57 GLY n
1 58 THR n
1 59 LYS n
1 60 ILE n
1 61 ALA n
1 62 GLU n
1 63 LYS n
1 64 ILE n
1 65 ASP n
1 66 GLU n
1 67 PHE n
1 68 LEU n
1 69 ALA n
1 70 THR n
1 71 GLY n
1 72 LYS n
1 73 LEU n
1 74 ARG n
1 75 LYS n
1 76 LEU n
1 77 GLU n
1 78 LYS n
1 79 ILE n
1 80 ARG n
1 81 GLN n
1 82 ASP n
1 83 ASP n
1 84 THR n
1 85 SER n
1 86 SER n
1 87 SER n
1 88 ILE n
1 89 ASN n
1 90 PHE n
1 91 LEU n
1 92 THR n
1 93 ARG n
1 94 VAL n
1 95 SER n
1 96 GLY n
1 97 ILE n
1 98 GLY n
1 99 PRO n
1 100 SER n
1 101 ALA n
1 102 ALA n
1 103 ARG n
1 104 LYS n
1 105 PHE n
1 106 VAL n
1 107 ASP n
1 108 GLU n
1 109 GLY n
1 110 ILE n
1 111 LYS n
1 112 THR n
1 113 LEU n
1 114 GLU n
1 115 ASP n
1 116 LEU n
1 117 ARG n
1 118 LYS n
1 119 ASN n
1 120 GLU n
1 121 ASP n
1 122 LYS n
1 123 LEU n
1 124 ASN n
1 125 HIS n
1 126 HIS n
1 127 GLN n
1 128 ARG n
1 129 ILE n
1 130 GLY n
1 131 LEU n
1 132 LYS n
1 133 TYR n
1 134 PHE n
1 135 GLY n
1 136 ASP n
1 137 PHE n
1 138 GLU n
1 139 LYS n
1 140 ARG n
1 141 ILE n
1 142 PRO n
1 143 ARG n
1 144 GLU n
1 145 GLU n
1 146 MET n
1 147 LEU n
1 148 GLN n
1 149 MET n
1 150 GLN n
1 151 ASP n
1 152 ILE n
1 153 VAL n
1 154 LEU n
1 155 ASN n
1 156 GLU n
1 157 VAL n
1 158 LYS n
1 159 LYS n
1 160 VAL n
1 161 ASP n
1 162 SER n
1 163 GLU n
1 164 TYR n
1 165 ILE n
1 166 ALA n
1 167 THR n
1 168 VAL n
1 169 CYS n
1 170 GLY n
1 171 SER n
1 172 PHE n
1 173 ARG n
1 174 ARG n
1 175 GLY n
1 176 ALA n
1 177 GLU n
1 178 SER n
1 179 SER n
1 180 GLY n
1 181 ASP n
1 182 MET n
1 183 ASP n
1 184 VAL n
1 185 LEU n
1 186 LEU n
1 187 THR n
1 188 HIS n
1 189 PRO n
1 190 SER n
1 191 PHE n
1 192 THR n
1 193 SER n
1 194 GLU n
1 195 SER n
1 196 THR n
1 197 LYS n
1 198 GLN n
1 199 PRO n
1 200 LYS n
1 201 LEU n
1 202 LEU n
1 203 HIS n
1 204 GLN n
1 205 VAL n
1 206 VAL n
1 207 GLU n
1 208 GLN n
1 209 LEU n
1 210 GLN n
1 211 LYS n
1 212 VAL n
1 213 HIS n
1 214 PHE n
1 215 ILE n
1 216 THR n
1 217 ASP n
1 218 THR n
1 219 LEU n
1 220 SER n
1 221 LYS n
1 222 GLY n
1 223 GLU n
1 224 THR n
1 225 LYS n
1 226 PHE n
1 227 MET n
1 228 GLY n
1 229 VAL n
1 230 CYS n
1 231 GLN n
1 232 LEU n
1 233 PRO n
1 234 SER n
1 235 LYS n
1 236 ASN n
1 237 ASP n
1 238 GLU n
1 239 LYS n
1 240 GLU n
1 241 TYR n
1 242 PRO n
1 243 HIS n
1 244 ARG n
1 245 ARG n
1 246 ILE n
1 247 ASP n
1 248 ILE n
1 249 ARG n
1 250 LEU n
1 251 ILE n
1 252 PRO n
1 253 LYS n
1 254 ASP n
1 255 GLN n
1 256 TYR n
1 257 TYR n
1 258 CYS n
1 259 GLY n
1 260 VAL n
1 261 LEU n
1 262 TYR n
1 263 PHE n
1 264 THR n
1 265 GLY n
1 266 SER n
1 267 ASP n
1 268 ILE n
1 269 PHE n
1 270 ASN n
1 271 LYS n
1 272 ASN n
1 273 MET n
1 274 ARG n
1 275 ALA n
1 276 HIS n
1 277 ALA n
1 278 LEU n
1 279 GLU n
1 280 LYS n
1 281 GLY n
1 282 PHE n
1 283 THR n
1 284 ILE n
1 285 ASN n
1 286 GLU n
1 287 TYR n
1 288 THR n
1 289 ILE n
1 290 ARG n
1 291 PRO n
1 292 LEU n
1 293 GLY n
1 294 VAL n
1 295 THR n
1 296 GLY n
1 297 VAL n
1 298 ALA n
1 299 GLY n
1 300 GLU n
1 301 PRO n
1 302 LEU n
1 303 PRO n
1 304 VAL n
1 305 ASP n
1 306 SER n
1 307 GLU n
1 308 LYS n
1 309 ASP n
1 310 ILE n
1 311 PHE n
1 312 ASP n
1 313 TYR n
1 314 ILE n
1 315 GLN n
1 316 TRP n
1 317 LYS n
1 318 TYR n
1 319 ARG n
1 320 GLU n
1 321 PRO n
1 322 LYS n
1 323 ASP n
1 324 ARG n
1 325 SER n
1 326 GLU n
2 1 DC n
2 2 DC n
2 3 DG n
2 4 DA n
2 5 DC n
2 6 DA n
2 7 DG n
2 8 DC n
2 9 DG n
2 10 DC n
2 11 DA n
2 12 DT n
2 13 DC n
2 14 DA n
2 15 DG n
2 16 DC n
3 1 DG n
3 2 DC n
3 3 DT n
3 4 DG n
3 5 DA n
3 6 DT n
3 7 DG n
3 8 DC n
3 9 DG n
3 10 DC n
4 1 DG n
4 2 DT n
4 3 DC n
4 4 DG n
4 5 DG n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name Human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene POLB
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_isoform
1 UNP DPOLB_HUMAN P06746 1
;TLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIR
QDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKV
DSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKE
YPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYRE
PKDRSE
;
10 ?
2 PDB 3GDX 3GDX 2 CCGACAGCGCATCAGC 1 ?
3 PDB 3GDX 3GDX 3 GCTGATGCGC 1 ?
4 PDB 3GDX 3GDX 4 GTCGG 1 ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3GDX A 1 ? 326 ? P06746 10 ? 335 ? 10 335
2 2 3GDX T 1 ? 16 ? 3GDX 1 ? 16 ? 1 16
3 3 3GDX P 1 ? 10 ? 3GDX 1 ? 10 ? 1 10
4 4 3GDX D 1 ? 5 ? 3GDX 1 ? 5 ? 1 5
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
4BD non-polymer . "5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]thymidine" ?
'C11 H17 F2 N2 O13 P3' 516.176
ALA 'L-peptide linking' y ALANINE ?
'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ?
'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ?
'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ?
'C4 H7 N O4' 133.103
CL non-polymer . 'CHLORIDE ION' ? 'Cl -1'
35.453
CYS 'L-peptide linking' y CYSTEINE ?
'C3 H7 N O2 S' 121.158
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O6 P' 331.222
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ?
'C9 H14 N3 O7 P' 307.197
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?
'C10 H14 N5 O7 P' 347.221
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ?
'C10 H15 N2 O8 P' 322.208
GLN 'L-peptide linking' y GLUTAMINE ?
'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ?
'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ?
'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ?
'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O'
18.015
ILE 'L-peptide linking' y ISOLEUCINE ?
'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ?
'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ?
'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ?
'C5 H11 N O2 S' 149.211
MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2'
24.305
NA non-polymer . 'SODIUM ION' ? 'Na 1'
22.990
PHE 'L-peptide linking' y PHENYLALANINE ?
'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ?
'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ?
'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ?
'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ?
'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ?
'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ?
'C5 H11 N O2' 117.146
#
_exptl.entry_id 3GDX
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.20
_exptl_crystal.density_percent_sol 44.20
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.temp 291
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 8.0
_exptl_crystal_grow.pdbx_details
'100 mM IMIDAZOLE,pH 8.0, SODIUM ACETATE 350 mM, PEG2000 MONOMETHYL ETHER 20%, VAPOR DIFFUSION, SITTING DROP, temperature 291K'
_exptl_crystal_grow.pdbx_pH_range ?
#
loop_
_exptl_crystal_grow_comp.crystal_id
_exptl_crystal_grow_comp.id
_exptl_crystal_grow_comp.sol_id
_exptl_crystal_grow_comp.name
_exptl_crystal_grow_comp.volume
_exptl_crystal_grow_comp.conc
_exptl_crystal_grow_comp.details
1 1 1 IMIDAZOLE ? ? ?
1 2 1 'SODIUM ACETATE' ? ? ?
1 3 1 PEG2000 ? ? ?
1 4 1 'MONOMETHYL ETHER' ? ? ?
1 5 2 'SODIUM ACETATE' ? ? ?
1 6 2 PEG2000 ? ? ?
1 7 2 'MONOMETHYL ETHER' ? ? ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'RIGAKU SATURN 92'
_diffrn_detector.pdbx_collection_date 2005-04-19
_diffrn_detector.details VIRAMAX
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU MICROMAX-007 HF'
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.5418
#
_reflns.entry_id 3GDX
_reflns.observed_criterion_sigma_I 0
_reflns.observed_criterion_sigma_F -3
_reflns.d_resolution_low 50
_reflns.d_resolution_high 2.2
_reflns.number_obs 18597
_reflns.number_all 18597
_reflns.percent_possible_obs 86.4
_reflns.pdbx_Rmerge_I_obs 0.098
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 9.2
_reflns.B_iso_Wilson_estimate 17.5
_reflns.pdbx_redundancy 2.3
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.2
_reflns_shell.d_res_low 2.28
_reflns_shell.percent_possible_all 82.2
_reflns_shell.Rmerge_I_obs 0.438
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 2.28
_reflns_shell.pdbx_redundancy 2.5
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 1757
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 3GDX
_refine.ls_number_reflns_obs 15889
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF 333638.11
_refine.pdbx_data_cutoff_low_absF 0.000000
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 20.58
_refine.ls_d_res_high 2.20
_refine.ls_percent_reflns_obs 74.9
_refine.ls_R_factor_obs 0.208
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.208
_refine.ls_R_factor_R_free 0.266
_refine.ls_R_factor_R_free_error 0.007
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 9.8
_refine.ls_number_reflns_R_free 1559
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean 29.8
_refine.aniso_B[1][1] 2.09
_refine.aniso_B[2][2] -1.14
_refine.aniso_B[3][3] -0.94
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 5.36
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'FLAT MODEL'
_refine.solvent_model_param_ksol 0.324569
_refine.solvent_model_param_bsol 34.1284
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model 'PDB entry 2FMS'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model RESTRAINED
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3GDX
_refine_analyze.Luzzati_coordinate_error_obs 0.27
_refine_analyze.Luzzati_sigma_a_obs 0.29
_refine_analyze.Luzzati_d_res_low_obs 5.00
_refine_analyze.Luzzati_coordinate_error_free 0.37
_refine_analyze.Luzzati_sigma_a_free 0.38
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 2656
_refine_hist.pdbx_number_atoms_nucleic_acid 631
_refine_hist.pdbx_number_atoms_ligand 37
_refine_hist.number_atoms_solvent 277
_refine_hist.number_atoms_total 3601
_refine_hist.d_res_high 2.20
_refine_hist.d_res_low 20.58
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d 1.01 ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_mcbond_it 1.34 1.50 ? ? 'X-RAY DIFFRACTION' ?
c_mcangle_it 2.14 2.00 ? ? 'X-RAY DIFFRACTION' ?
c_scbond_it 1.92 2.00 ? ? 'X-RAY DIFFRACTION' ?
c_scangle_it 2.89 2.50 ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 6
_refine_ls_shell.d_res_high 2.20
_refine_ls_shell.d_res_low 2.34
_refine_ls_shell.number_reflns_R_work 2359
_refine_ls_shell.R_factor_R_work 0.281
_refine_ls_shell.percent_reflns_obs 75.3
_refine_ls_shell.R_factor_R_free 0.345
_refine_ls_shell.R_factor_R_free_error 0.021
_refine_ls_shell.percent_reflns_R_free 10.3
_refine_ls_shell.number_reflns_R_free 271
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 4BD.param protein.top 'X-RAY DIFFRACTION'
2 ? dna-rna.top 'X-RAY DIFFRACTION'
3 ? water.top 'X-RAY DIFFRACTION'
4 ? dtf.top 'X-RAY DIFFRACTION'
5 ? dNTP.top 'X-RAY DIFFRACTION'
#
_struct.entry_id 3GDX
_struct.title 'Dna polymerase beta with a gapped DND substrate and dTMP(CF2)PP'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3GDX
_struct_keywords.pdbx_keywords TRANSFERASE/DNA
_struct_keywords.text
;NUCLOETIDYL TRANSFERASE, DNA POLYMERASE, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Lyase, Magnesium, Metal-binding, Nucleotidyltransferase, Nucleus, Polymorphism, Sodium, Transferase, TRANSFERASE-DNA COMPLEX
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
F N N 6 ?
G N N 6 ?
H N N 7 ?
I N N 7 ?
J N N 8 ?
K N N 8 ?
L N N 9 ?
M N N 9 ?
N N N 9 ?
O N N 9 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASN A 3 ? VAL A 20 ? ASN A 12 VAL A 29 1 ? 18
HELX_P HELX_P2 2 ALA A 23 ? LYS A 39 ? ALA A 32 LYS A 48 1 ? 17
HELX_P HELX_P3 3 SER A 46 ? LYS A 52 ? SER A 55 LYS A 61 1 ? 7
HELX_P HELX_P4 4 GLY A 57 ? GLY A 71 ? GLY A 66 GLY A 80 1 ? 15
HELX_P HELX_P5 5 LEU A 73 ? ASP A 82 ? LEU A 82 ASP A 91 1 ? 10
HELX_P HELX_P6 6 ASP A 82 ? THR A 92 ? ASP A 91 THR A 101 1 ? 11
HELX_P HELX_P7 7 GLY A 98 ? ASP A 107 ? GLY A 107 ASP A 116 1 ? 10
HELX_P HELX_P8 8 THR A 112 ? ASN A 119 ? THR A 121 ASN A 128 1 ? 8
HELX_P HELX_P9 9 GLU A 120 ? LEU A 123 ? GLU A 129 LEU A 132 5 ? 4
HELX_P HELX_P10 10 ASN A 124 ? TYR A 133 ? ASN A 133 TYR A 142 1 ? 10
HELX_P HELX_P11 11 TYR A 133 ? LYS A 139 ? TYR A 142 LYS A 148 1 ? 7
HELX_P HELX_P12 12 ARG A 143 ? ASP A 161 ? ARG A 152 ASP A 170 1 ? 19
HELX_P HELX_P13 13 CYS A 169 ? ARG A 174 ? CYS A 178 ARG A 183 1 ? 6
HELX_P HELX_P14 14 LYS A 200 ? VAL A 212 ? LYS A 209 VAL A 221 1 ? 13
HELX_P HELX_P15 15 PRO A 252 ? ASP A 254 ? PRO A 261 ASP A 263 5 ? 3
HELX_P HELX_P16 16 GLN A 255 ? GLY A 265 ? GLN A 264 GLY A 274 1 ? 11
HELX_P HELX_P17 17 SER A 266 ? LYS A 280 ? SER A 275 LYS A 289 1 ? 15
HELX_P HELX_P18 18 SER A 306 ? ILE A 314 ? SER A 315 ILE A 323 1 ? 9
HELX_P HELX_P19 19 GLU A 320 ? ARG A 324 ? GLU A 329 ARG A 333 5 ? 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
metalc1 metalc ? ? L HOH . O ? ? ? 1_555 F MG . MG ? ? A HOH 1 A MG 347 1_555 ? ? ? ? ? ? ? 2.214 ? ?
metalc2 metalc ? ? L HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 2 A MG 348 1_555 ? ? ? ? ? ? ? 2.193 ? ?
metalc3 metalc ? ? A LYS 51 O ? ? ? 1_555 I NA . NA ? ? A LYS 60 A NA 350 1_555 ? ? ? ? ? ? ? 2.443 ? ?
metalc4 metalc ? ? A LEU 53 O ? ? ? 1_555 I NA . NA ? ? A LEU 62 A NA 350 1_555 ? ? ? ? ? ? ? 2.448 ? ?
metalc5 metalc ? ? A VAL 56 O ? ? ? 1_555 I NA . NA ? ? A VAL 65 A NA 350 1_555 ? ? ? ? ? ? ? 2.667 ? ?
metalc6 metalc ? ? A THR 92 O ? ? ? 1_555 H NA . NA ? ? A THR 101 A NA 349 1_555 ? ? ? ? ? ? ? 2.262 ? ?
metalc7 metalc ? ? A VAL 94 O ? ? ? 1_555 H NA . NA ? ? A VAL 103 A NA 349 1_555 ? ? ? ? ? ? ? 2.688 ? ?
metalc8 metalc ? ? A ILE 97 O ? ? ? 1_555 H NA . NA ? ? A ILE 106 A NA 349 1_555 ? ? ? ? ? ? ? 2.186 ? ?
metalc9 metalc ? ? A ASP 181 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 190 A MG 347 1_555 ? ? ? ? ? ? ? 1.795 ? ?
metalc10 metalc ? ? A ASP 181 OD2 ? ? ? 1_555 G MG . MG ? ? A ASP 190 A MG 348 1_555 ? ? ? ? ? ? ? 2.268 ? ?
metalc11 metalc ? ? A ASP 183 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 192 A MG 347 1_555 ? ? ? ? ? ? ? 2.114 ? ?
metalc12 metalc ? ? A ASP 183 OD1 ? ? ? 1_555 G MG . MG ? ? A ASP 192 A MG 348 1_555 ? ? ? ? ? ? ? 2.023 ? ?
metalc13 metalc ? ? A ASP 247 OD2 ? ? ? 1_555 G MG . MG ? ? A ASP 256 A MG 348 1_555 ? ? ? ? ? ? ? 2.028 ? ?
metalc14 metalc ? ? E 4BD . O1A ? ? ? 1_555 F MG . MG ? ? A 4BD 346 A MG 347 1_555 ? ? ? ? ? ? ? 2.002 ? ?
metalc15 metalc ? ? E 4BD . O2B ? ? ? 1_555 F MG . MG ? ? A 4BD 346 A MG 347 1_555 ? ? ? ? ? ? ? 2.204 ? ?
metalc16 metalc ? ? E 4BD . O3G ? ? ? 1_555 F MG . MG ? ? A 4BD 346 A MG 347 1_555 ? ? ? ? ? ? ? 2.107 ? ?
metalc17 metalc ? ? E 4BD . O1A ? ? ? 1_555 G MG . MG ? ? A 4BD 346 A MG 348 1_555 ? ? ? ? ? ? ? 2.270 ? ?
metalc18 metalc ? ? G MG . MG ? ? ? 1_555 C DC 10 "O3'" ? ? A MG 348 P DC 10 1_555 ? ? ? ? ? ? ? 2.146 ? ?
metalc19 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 349 A HOH 510 1_555 ? ? ? ? ? ? ? 2.729 ? ?
metalc20 metalc ? ? H NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 349 P DG 9 1_555 ? ? ? ? ? ? ? 2.383 ? ?
metalc21 metalc ? ? H NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 349 P HOH 56 1_555 ? ? ? ? ? ? ? 2.219 ? ?
metalc22 metalc ? ? I NA . NA ? ? ? 1_555 D DC 3 OP1 ? ? A NA 350 D DC 3 1_555 ? ? ? ? ? ? ? 2.513 ? ?
metalc23 metalc ? ? I NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 350 D HOH 55 1_555 ? ? ? ? ? ? ? 2.637 ? ?
hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog10 hydrog ? ? B DA 4 N1 ? ? ? 1_555 D DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog11 hydrog ? ? B DA 4 N6 ? ? ? 1_555 D DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog15 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 10 N3 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog16 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 10 O2 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog17 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 10 N4 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog18 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog19 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog20 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog21 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog22 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog23 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog24 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog25 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog26 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog27 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog28 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog29 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog30 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog31 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog32 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog33 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog34 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog35 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog36 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog37 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog38 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog39 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog40 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
hydrog41 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
metalc ? ?
hydrog ? ?
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id GLY
_struct_mon_prot_cis.label_seq_id 265
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id GLY
_struct_mon_prot_cis.auth_seq_id 274
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 SER
_struct_mon_prot_cis.pdbx_label_seq_id_2 266
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 SER
_struct_mon_prot_cis.pdbx_auth_seq_id_2 275
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle 1.64
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 2 ?
B ? 5 ?
C ? 2 ?
D ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
C 1 2 ? anti-parallel
D 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 ILE A 141 ? PRO A 142 ? ILE A 150 PRO A 151
A 2 SER A 178 ? SER A 179 ? SER A 187 SER A 188
B 1 ILE A 165 ? VAL A 168 ? ILE A 174 VAL A 177
B 2 MET A 182 ? THR A 187 ? MET A 191 THR A 196
B 3 ARG A 244 ? LEU A 250 ? ARG A 253 LEU A 259
B 4 LYS A 225 ? CYS A 230 ? LYS A 234 CYS A 239
B 5 ILE A 215 ? LYS A 221 ? ILE A 224 LYS A 230
C 1 PHE A 191 ? THR A 192 ? PHE A 200 THR A 201
C 2 SER A 195 ? THR A 196 ? SER A 204 THR A 205
D 1 PHE A 282 ? ILE A 284 ? PHE A 291 ILE A 293
D 2 ILE A 289 ? PRO A 291 ? ILE A 298 PRO A 300
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N ILE A 141 ? N ILE A 150 O SER A 179 ? O SER A 188
B 1 2 N THR A 167 ? N THR A 176 O LEU A 185 ? O LEU A 194
B 2 3 O LEU A 186 ? O LEU A 195 N ARG A 249 ? N ARG A 258
B 3 4 O ARG A 244 ? O ARG A 253 N CYS A 230 ? N CYS A 239
B 4 5 O VAL A 229 ? O VAL A 238 N THR A 216 ? N THR A 225
C 1 2 N THR A 192 ? N THR A 201 O SER A 195 ? O SER A 204
D 1 2 N THR A 283 ? N THR A 292 O ARG A 290 ? O ARG A 299
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A 4BD 346 ? 23 'BINDING SITE FOR RESIDUE 4BD A 346'
AC2 Software A MG 347 ? 5 'BINDING SITE FOR RESIDUE MG A 347'
AC3 Software A MG 348 ? 7 'BINDING SITE FOR RESIDUE MG A 348'
AC4 Software A NA 349 ? 6 'BINDING SITE FOR RESIDUE NA A 349'
AC5 Software A NA 350 ? 5 'BINDING SITE FOR RESIDUE NA A 350'
AC6 Software A CL 351 ? 3 'BINDING SITE FOR RESIDUE CL A 351'
AC7 Software A CL 352 ? 4 'BINDING SITE FOR RESIDUE CL A 352'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 23 HOH L . ? HOH A 1 . ? 1_555 ?
2 AC1 23 HOH L . ? HOH A 2 . ? 1_555 ?
3 AC1 23 GLY A 170 ? GLY A 179 . ? 1_555 ?
4 AC1 23 SER A 171 ? SER A 180 . ? 1_555 ?
5 AC1 23 ARG A 174 ? ARG A 183 . ? 1_555 ?
6 AC1 23 GLY A 180 ? GLY A 189 . ? 1_555 ?
7 AC1 23 ASP A 181 ? ASP A 190 . ? 1_555 ?
8 AC1 23 ASP A 183 ? ASP A 192 . ? 1_555 ?
9 AC1 23 TYR A 262 ? TYR A 271 . ? 1_555 ?
10 AC1 23 PHE A 263 ? PHE A 272 . ? 1_555 ?
11 AC1 23 THR A 264 ? THR A 273 . ? 1_555 ?
12 AC1 23 GLY A 265 ? GLY A 274 . ? 1_555 ?
13 AC1 23 ASP A 267 ? ASP A 276 . ? 1_555 ?
14 AC1 23 ASN A 270 ? ASN A 279 . ? 1_555 ?
15 AC1 23 MG F . ? MG A 347 . ? 1_555 ?
16 AC1 23 MG G . ? MG A 348 . ? 1_555 ?
17 AC1 23 HOH L . ? HOH A 362 . ? 1_555 ?
18 AC1 23 HOH L . ? HOH A 427 . ? 1_555 ?
19 AC1 23 HOH L . ? HOH A 448 . ? 1_555 ?
20 AC1 23 HOH L . ? HOH A 459 . ? 1_555 ?
21 AC1 23 HOH L . ? HOH A 488 . ? 1_555 ?
22 AC1 23 DC C 10 ? DC P 10 . ? 1_555 ?
23 AC1 23 DA B 6 ? DA T 6 . ? 1_555 ?
24 AC2 5 HOH L . ? HOH A 1 . ? 1_555 ?
25 AC2 5 ASP A 181 ? ASP A 190 . ? 1_555 ?
26 AC2 5 ASP A 183 ? ASP A 192 . ? 1_555 ?
27 AC2 5 4BD E . ? 4BD A 346 . ? 1_555 ?
28 AC2 5 MG G . ? MG A 348 . ? 1_555 ?
29 AC3 7 HOH L . ? HOH A 2 . ? 1_555 ?
30 AC3 7 ASP A 181 ? ASP A 190 . ? 1_555 ?
31 AC3 7 ASP A 183 ? ASP A 192 . ? 1_555 ?
32 AC3 7 ASP A 247 ? ASP A 256 . ? 1_555 ?
33 AC3 7 4BD E . ? 4BD A 346 . ? 1_555 ?
34 AC3 7 MG F . ? MG A 347 . ? 1_555 ?
35 AC3 7 DC C 10 ? DC P 10 . ? 1_555 ?
36 AC4 6 THR A 92 ? THR A 101 . ? 1_555 ?
37 AC4 6 VAL A 94 ? VAL A 103 . ? 1_555 ?
38 AC4 6 ILE A 97 ? ILE A 106 . ? 1_555 ?
39 AC4 6 HOH L . ? HOH A 510 . ? 1_555 ?
40 AC4 6 DG C 9 ? DG P 9 . ? 1_555 ?
41 AC4 6 HOH N . ? HOH P 56 . ? 1_555 ?
42 AC5 5 LYS A 51 ? LYS A 60 . ? 1_555 ?
43 AC5 5 LEU A 53 ? LEU A 62 . ? 1_555 ?
44 AC5 5 VAL A 56 ? VAL A 65 . ? 1_555 ?
45 AC5 5 DC D 3 ? DC D 3 . ? 1_555 ?
46 AC5 5 HOH O . ? HOH D 55 . ? 1_555 ?
47 AC6 3 ASN A 285 ? ASN A 294 . ? 1_555 ?
48 AC6 3 THR A 288 ? THR A 297 . ? 1_555 ?
49 AC6 3 ARG A 290 ? ARG A 299 . ? 1_555 ?
50 AC7 4 GLN A 255 ? GLN A 264 . ? 1_555 ?
51 AC7 4 CYS A 258 ? CYS A 267 . ? 1_555 ?
52 AC7 4 VAL A 304 ? VAL A 313 . ? 1_555 ?
53 AC7 4 HOH L . ? HOH A 450 . ? 1_555 ?
#
_database_PDB_matrix.entry_id 3GDX
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 3GDX
_atom_sites.fract_transf_matrix[1][1] 0.019802
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.006396
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.012547
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.019003
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CL
F
MG
N
NA
O
P
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 THR 1 10 10 THR THR A . n
A 1 2 LEU 2 11 11 LEU LEU A . n
A 1 3 ASN 3 12 12 ASN ASN A . n
A 1 4 GLY 4 13 13 GLY GLY A . n
A 1 5 GLY 5 14 14 GLY GLY A . n
A 1 6 ILE 6 15 15 ILE ILE A . n
A 1 7 THR 7 16 16 THR THR A . n
A 1 8 ASP 8 17 17 ASP ASP A . n
A 1 9 MET 9 18 18 MET MET A . n
A 1 10 LEU 10 19 19 LEU LEU A . n
A 1 11 THR 11 20 20 THR THR A . n
A 1 12 GLU 12 21 21 GLU GLU A . n
A 1 13 LEU 13 22 22 LEU LEU A . n
A 1 14 ALA 14 23 23 ALA ALA A . n
A 1 15 ASN 15 24 24 ASN ASN A . n
A 1 16 PHE 16 25 25 PHE PHE A . n
A 1 17 GLU 17 26 26 GLU GLU A . n
A 1 18 LYS 18 27 27 LYS LYS A . n
A 1 19 ASN 19 28 28 ASN ASN A . n
A 1 20 VAL 20 29 29 VAL VAL A . n
A 1 21 SER 21 30 30 SER SER A . n
A 1 22 GLN 22 31 31 GLN GLN A . n
A 1 23 ALA 23 32 32 ALA ALA A . n
A 1 24 ILE 24 33 33 ILE ILE A . n
A 1 25 HIS 25 34 34 HIS HIS A . n
A 1 26 LYS 26 35 35 LYS LYS A . n
A 1 27 TYR 27 36 36 TYR TYR A . n
A 1 28 ASN 28 37 37 ASN ASN A . n
A 1 29 ALA 29 38 38 ALA ALA A . n
A 1 30 TYR 30 39 39 TYR TYR A . n
A 1 31 ARG 31 40 40 ARG ARG A . n
A 1 32 LYS 32 41 41 LYS LYS A . n
A 1 33 ALA 33 42 42 ALA ALA A . n
A 1 34 ALA 34 43 43 ALA ALA A . n
A 1 35 SER 35 44 44 SER SER A . n
A 1 36 VAL 36 45 45 VAL VAL A . n
A 1 37 ILE 37 46 46 ILE ILE A . n
A 1 38 ALA 38 47 47 ALA ALA A . n
A 1 39 LYS 39 48 48 LYS LYS A . n
A 1 40 TYR 40 49 49 TYR TYR A . n
A 1 41 PRO 41 50 50 PRO PRO A . n
A 1 42 HIS 42 51 51 HIS HIS A . n
A 1 43 LYS 43 52 52 LYS LYS A . n
A 1 44 ILE 44 53 53 ILE ILE A . n
A 1 45 LYS 45 54 54 LYS LYS A . n
A 1 46 SER 46 55 55 SER SER A . n
A 1 47 GLY 47 56 56 GLY GLY A . n
A 1 48 ALA 48 57 57 ALA ALA A . n
A 1 49 GLU 49 58 58 GLU GLU A . n
A 1 50 ALA 50 59 59 ALA ALA A . n
A 1 51 LYS 51 60 60 LYS LYS A . n
A 1 52 LYS 52 61 61 LYS LYS A . n
A 1 53 LEU 53 62 62 LEU LEU A . n
A 1 54 PRO 54 63 63 PRO PRO A . n
A 1 55 GLY 55 64 64 GLY GLY A . n
A 1 56 VAL 56 65 65 VAL VAL A . n
A 1 57 GLY 57 66 66 GLY GLY A . n
A 1 58 THR 58 67 67 THR THR A . n
A 1 59 LYS 59 68 68 LYS LYS A . n
A 1 60 ILE 60 69 69 ILE ILE A . n
A 1 61 ALA 61 70 70 ALA ALA A . n
A 1 62 GLU 62 71 71 GLU GLU A . n
A 1 63 LYS 63 72 72 LYS LYS A . n
A 1 64 ILE 64 73 73 ILE ILE A . n
A 1 65 ASP 65 74 74 ASP ASP A . n
A 1 66 GLU 66 75 75 GLU GLU A . n
A 1 67 PHE 67 76 76 PHE PHE A . n
A 1 68 LEU 68 77 77 LEU LEU A . n
A 1 69 ALA 69 78 78 ALA ALA A . n
A 1 70 THR 70 79 79 THR THR A . n
A 1 71 GLY 71 80 80 GLY GLY A . n
A 1 72 LYS 72 81 81 LYS LYS A . n
A 1 73 LEU 73 82 82 LEU LEU A . n
A 1 74 ARG 74 83 83 ARG ARG A . n
A 1 75 LYS 75 84 84 LYS LYS A . n
A 1 76 LEU 76 85 85 LEU LEU A . n
A 1 77 GLU 77 86 86 GLU GLU A . n
A 1 78 LYS 78 87 87 LYS LYS A . n
A 1 79 ILE 79 88 88 ILE ILE A . n
A 1 80 ARG 80 89 89 ARG ARG A . n
A 1 81 GLN 81 90 90 GLN GLN A . n
A 1 82 ASP 82 91 91 ASP ASP A . n
A 1 83 ASP 83 92 92 ASP ASP A . n
A 1 84 THR 84 93 93 THR THR A . n
A 1 85 SER 85 94 94 SER SER A . n
A 1 86 SER 86 95 95 SER SER A . n
A 1 87 SER 87 96 96 SER SER A . n
A 1 88 ILE 88 97 97 ILE ILE A . n
A 1 89 ASN 89 98 98 ASN ASN A . n
A 1 90 PHE 90 99 99 PHE PHE A . n
A 1 91 LEU 91 100 100 LEU LEU A . n
A 1 92 THR 92 101 101 THR THR A . n
A 1 93 ARG 93 102 102 ARG ARG A . n
A 1 94 VAL 94 103 103 VAL VAL A . n
A 1 95 SER 95 104 104 SER SER A . n
A 1 96 GLY 96 105 105 GLY GLY A . n
A 1 97 ILE 97 106 106 ILE ILE A . n
A 1 98 GLY 98 107 107 GLY GLY A . n
A 1 99 PRO 99 108 108 PRO PRO A . n
A 1 100 SER 100 109 109 SER SER A . n
A 1 101 ALA 101 110 110 ALA ALA A . n
A 1 102 ALA 102 111 111 ALA ALA A . n
A 1 103 ARG 103 112 112 ARG ARG A . n
A 1 104 LYS 104 113 113 LYS LYS A . n
A 1 105 PHE 105 114 114 PHE PHE A . n
A 1 106 VAL 106 115 115 VAL VAL A . n
A 1 107 ASP 107 116 116 ASP ASP A . n
A 1 108 GLU 108 117 117 GLU GLU A . n
A 1 109 GLY 109 118 118 GLY GLY A . n
A 1 110 ILE 110 119 119 ILE ILE A . n
A 1 111 LYS 111 120 120 LYS LYS A . n
A 1 112 THR 112 121 121 THR THR A . n
A 1 113 LEU 113 122 122 LEU LEU A . n
A 1 114 GLU 114 123 123 GLU GLU A . n
A 1 115 ASP 115 124 124 ASP ASP A . n
A 1 116 LEU 116 125 125 LEU LEU A . n
A 1 117 ARG 117 126 126 ARG ARG A . n
A 1 118 LYS 118 127 127 LYS LYS A . n
A 1 119 ASN 119 128 128 ASN ASN A . n
A 1 120 GLU 120 129 129 GLU GLU A . n
A 1 121 ASP 121 130 130 ASP ASP A . n
A 1 122 LYS 122 131 131 LYS LYS A . n
A 1 123 LEU 123 132 132 LEU LEU A . n
A 1 124 ASN 124 133 133 ASN ASN A . n
A 1 125 HIS 125 134 134 HIS HIS A . n
A 1 126 HIS 126 135 135 HIS HIS A . n
A 1 127 GLN 127 136 136 GLN GLN A . n
A 1 128 ARG 128 137 137 ARG ARG A . n
A 1 129 ILE 129 138 138 ILE ILE A . n
A 1 130 GLY 130 139 139 GLY GLY A . n
A 1 131 LEU 131 140 140 LEU LEU A . n
A 1 132 LYS 132 141 141 LYS LYS A . n
A 1 133 TYR 133 142 142 TYR TYR A . n
A 1 134 PHE 134 143 143 PHE PHE A . n
A 1 135 GLY 135 144 144 GLY GLY A . n
A 1 136 ASP 136 145 145 ASP ASP A . n
A 1 137 PHE 137 146 146 PHE PHE A . n
A 1 138 GLU 138 147 147 GLU GLU A . n
A 1 139 LYS 139 148 148 LYS LYS A . n
A 1 140 ARG 140 149 149 ARG ARG A . n
A 1 141 ILE 141 150 150 ILE ILE A . n
A 1 142 PRO 142 151 151 PRO PRO A . n
A 1 143 ARG 143 152 152 ARG ARG A . n
A 1 144 GLU 144 153 153 GLU GLU A . n
A 1 145 GLU 145 154 154 GLU GLU A . n
A 1 146 MET 146 155 155 MET MET A . n
A 1 147 LEU 147 156 156 LEU LEU A . n
A 1 148 GLN 148 157 157 GLN GLN A . n
A 1 149 MET 149 158 158 MET MET A . n
A 1 150 GLN 150 159 159 GLN GLN A . n
A 1 151 ASP 151 160 160 ASP ASP A . n
A 1 152 ILE 152 161 161 ILE ILE A . n
A 1 153 VAL 153 162 162 VAL VAL A . n
A 1 154 LEU 154 163 163 LEU LEU A . n
A 1 155 ASN 155 164 164 ASN ASN A . n
A 1 156 GLU 156 165 165 GLU GLU A . n
A 1 157 VAL 157 166 166 VAL VAL A . n
A 1 158 LYS 158 167 167 LYS LYS A . n
A 1 159 LYS 159 168 168 LYS LYS A . n
A 1 160 VAL 160 169 169 VAL VAL A . n
A 1 161 ASP 161 170 170 ASP ASP A . n
A 1 162 SER 162 171 171 SER SER A . n
A 1 163 GLU 163 172 172 GLU GLU A . n
A 1 164 TYR 164 173 173 TYR TYR A . n
A 1 165 ILE 165 174 174 ILE ILE A . n
A 1 166 ALA 166 175 175 ALA ALA A . n
A 1 167 THR 167 176 176 THR THR A . n
A 1 168 VAL 168 177 177 VAL VAL A . n
A 1 169 CYS 169 178 178 CYS CYS A . n
A 1 170 GLY 170 179 179 GLY GLY A . n
A 1 171 SER 171 180 180 SER SER A . n
A 1 172 PHE 172 181 181 PHE PHE A . n
A 1 173 ARG 173 182 182 ARG ARG A . n
A 1 174 ARG 174 183 183 ARG ARG A . n
A 1 175 GLY 175 184 184 GLY GLY A . n
A 1 176 ALA 176 185 185 ALA ALA A . n
A 1 177 GLU 177 186 186 GLU GLU A . n
A 1 178 SER 178 187 187 SER SER A . n
A 1 179 SER 179 188 188 SER SER A . n
A 1 180 GLY 180 189 189 GLY GLY A . n
A 1 181 ASP 181 190 190 ASP ASP A . n
A 1 182 MET 182 191 191 MET MET A . n
A 1 183 ASP 183 192 192 ASP ASP A . n
A 1 184 VAL 184 193 193 VAL VAL A . n
A 1 185 LEU 185 194 194 LEU LEU A . n
A 1 186 LEU 186 195 195 LEU LEU A . n
A 1 187 THR 187 196 196 THR THR A . n
A 1 188 HIS 188 197 197 HIS HIS A . n
A 1 189 PRO 189 198 198 PRO PRO A . n
A 1 190 SER 190 199 199 SER SER A . n
A 1 191 PHE 191 200 200 PHE PHE A . n
A 1 192 THR 192 201 201 THR THR A . n
A 1 193 SER 193 202 202 SER SER A . n
A 1 194 GLU 194 203 203 GLU GLU A . n
A 1 195 SER 195 204 204 SER SER A . n
A 1 196 THR 196 205 205 THR THR A . n
A 1 197 LYS 197 206 206 LYS LYS A . n
A 1 198 GLN 198 207 207 GLN GLN A . n
A 1 199 PRO 199 208 208 PRO PRO A . n
A 1 200 LYS 200 209 209 LYS LYS A . n
A 1 201 LEU 201 210 210 LEU LEU A . n
A 1 202 LEU 202 211 211 LEU LEU A . n
A 1 203 HIS 203 212 212 HIS HIS A . n
A 1 204 GLN 204 213 213 GLN GLN A . n
A 1 205 VAL 205 214 214 VAL VAL A . n
A 1 206 VAL 206 215 215 VAL VAL A . n
A 1 207 GLU 207 216 216 GLU GLU A . n
A 1 208 GLN 208 217 217 GLN GLN A . n
A 1 209 LEU 209 218 218 LEU LEU A . n
A 1 210 GLN 210 219 219 GLN GLN A . n
A 1 211 LYS 211 220 220 LYS LYS A . n
A 1 212 VAL 212 221 221 VAL VAL A . n
A 1 213 HIS 213 222 222 HIS HIS A . n
A 1 214 PHE 214 223 223 PHE PHE A . n
A 1 215 ILE 215 224 224 ILE ILE A . n
A 1 216 THR 216 225 225 THR THR A . n
A 1 217 ASP 217 226 226 ASP ASP A . n
A 1 218 THR 218 227 227 THR THR A . n
A 1 219 LEU 219 228 228 LEU LEU A . n
A 1 220 SER 220 229 229 SER SER A . n
A 1 221 LYS 221 230 230 LYS LYS A . n
A 1 222 GLY 222 231 231 GLY GLY A . n
A 1 223 GLU 223 232 232 GLU GLU A . n
A 1 224 THR 224 233 233 THR THR A . n
A 1 225 LYS 225 234 234 LYS LYS A . n
A 1 226 PHE 226 235 235 PHE PHE A . n
A 1 227 MET 227 236 236 MET MET A . n
A 1 228 GLY 228 237 237 GLY GLY A . n
A 1 229 VAL 229 238 238 VAL VAL A . n
A 1 230 CYS 230 239 239 CYS CYS A . n
A 1 231 GLN 231 240 240 GLN GLN A . n
A 1 232 LEU 232 241 241 LEU LEU A . n
A 1 233 PRO 233 242 242 PRO PRO A . n
A 1 234 SER 234 243 243 SER SER A . n
A 1 235 LYS 235 244 244 LYS LYS A . n
A 1 236 ASN 236 245 245 ASN ASN A . n
A 1 237 ASP 237 246 246 ASP ASP A . n
A 1 238 GLU 238 247 247 GLU GLU A . n
A 1 239 LYS 239 248 248 LYS LYS A . n
A 1 240 GLU 240 249 249 GLU GLU A . n
A 1 241 TYR 241 250 250 TYR TYR A . n
A 1 242 PRO 242 251 251 PRO PRO A . n
A 1 243 HIS 243 252 252 HIS HIS A . n
A 1 244 ARG 244 253 253 ARG ARG A . n
A 1 245 ARG 245 254 254 ARG ARG A . n
A 1 246 ILE 246 255 255 ILE ILE A . n
A 1 247 ASP 247 256 256 ASP ASP A . n
A 1 248 ILE 248 257 257 ILE ILE A . n
A 1 249 ARG 249 258 258 ARG ARG A . n
A 1 250 LEU 250 259 259 LEU LEU A . n
A 1 251 ILE 251 260 260 ILE ILE A . n
A 1 252 PRO 252 261 261 PRO PRO A . n
A 1 253 LYS 253 262 262 LYS LYS A . n
A 1 254 ASP 254 263 263 ASP ASP A . n
A 1 255 GLN 255 264 264 GLN GLN A . n
A 1 256 TYR 256 265 265 TYR TYR A . n
A 1 257 TYR 257 266 266 TYR TYR A . n
A 1 258 CYS 258 267 267 CYS CYS A . n
A 1 259 GLY 259 268 268 GLY GLY A . n
A 1 260 VAL 260 269 269 VAL VAL A . n
A 1 261 LEU 261 270 270 LEU LEU A . n
A 1 262 TYR 262 271 271 TYR TYR A . n
A 1 263 PHE 263 272 272 PHE PHE A . n
A 1 264 THR 264 273 273 THR THR A . n
A 1 265 GLY 265 274 274 GLY GLY A . n
A 1 266 SER 266 275 275 SER SER A . n
A 1 267 ASP 267 276 276 ASP ASP A . n
A 1 268 ILE 268 277 277 ILE ILE A . n
A 1 269 PHE 269 278 278 PHE PHE A . n
A 1 270 ASN 270 279 279 ASN ASN A . n
A 1 271 LYS 271 280 280 LYS LYS A . n
A 1 272 ASN 272 281 281 ASN ASN A . n
A 1 273 MET 273 282 282 MET MET A . n
A 1 274 ARG 274 283 283 ARG ARG A . n
A 1 275 ALA 275 284 284 ALA ALA A . n
A 1 276 HIS 276 285 285 HIS HIS A . n
A 1 277 ALA 277 286 286 ALA ALA A . n
A 1 278 LEU 278 287 287 LEU LEU A . n
A 1 279 GLU 279 288 288 GLU GLU A . n
A 1 280 LYS 280 289 289 LYS LYS A . n
A 1 281 GLY 281 290 290 GLY GLY A . n
A 1 282 PHE 282 291 291 PHE PHE A . n
A 1 283 THR 283 292 292 THR THR A . n
A 1 284 ILE 284 293 293 ILE ILE A . n
A 1 285 ASN 285 294 294 ASN ASN A . n
A 1 286 GLU 286 295 295 GLU GLU A . n
A 1 287 TYR 287 296 296 TYR TYR A . n
A 1 288 THR 288 297 297 THR THR A . n
A 1 289 ILE 289 298 298 ILE ILE A . n
A 1 290 ARG 290 299 299 ARG ARG A . n
A 1 291 PRO 291 300 300 PRO PRO A . n
A 1 292 LEU 292 301 301 LEU LEU A . n
A 1 293 GLY 293 302 302 GLY GLY A . n
A 1 294 VAL 294 303 303 VAL VAL A . n
A 1 295 THR 295 304 304 THR THR A . n
A 1 296 GLY 296 305 305 GLY GLY A . n
A 1 297 VAL 297 306 306 VAL VAL A . n
A 1 298 ALA 298 307 307 ALA ALA A . n
A 1 299 GLY 299 308 308 GLY GLY A . n
A 1 300 GLU 300 309 309 GLU GLU A . n
A 1 301 PRO 301 310 310 PRO PRO A . n
A 1 302 LEU 302 311 311 LEU LEU A . n
A 1 303 PRO 303 312 312 PRO PRO A . n
A 1 304 VAL 304 313 313 VAL VAL A . n
A 1 305 ASP 305 314 314 ASP ASP A . n
A 1 306 SER 306 315 315 SER SER A . n
A 1 307 GLU 307 316 316 GLU GLU A . n
A 1 308 LYS 308 317 317 LYS LYS A . n
A 1 309 ASP 309 318 318 ASP ASP A . n
A 1 310 ILE 310 319 319 ILE ILE A . n
A 1 311 PHE 311 320 320 PHE PHE A . n
A 1 312 ASP 312 321 321 ASP ASP A . n
A 1 313 TYR 313 322 322 TYR TYR A . n
A 1 314 ILE 314 323 323 ILE ILE A . n
A 1 315 GLN 315 324 324 GLN GLN A . n
A 1 316 TRP 316 325 325 TRP TRP A . n
A 1 317 LYS 317 326 326 LYS LYS A . n
A 1 318 TYR 318 327 327 TYR TYR A . n
A 1 319 ARG 319 328 328 ARG ARG A . n
A 1 320 GLU 320 329 329 GLU GLU A . n
A 1 321 PRO 321 330 330 PRO PRO A . n
A 1 322 LYS 322 331 331 LYS LYS A . n
A 1 323 ASP 323 332 332 ASP ASP A . n
A 1 324 ARG 324 333 333 ARG ARG A . n
A 1 325 SER 325 334 334 SER SER A . n
A 1 326 GLU 326 335 335 GLU GLU A . n
B 2 1 DC 1 1 1 DC C T . n
B 2 2 DC 2 2 2 DC C T . n
B 2 3 DG 3 3 3 DG G T . n
B 2 4 DA 4 4 4 DA A T . n
B 2 5 DC 5 5 5 DC C T . n
B 2 6 DA 6 6 6 DA A T . n
B 2 7 DG 7 7 7 DG G T . n
B 2 8 DC 8 8 8 DC C T . n
B 2 9 DG 9 9 9 DG G T . n
B 2 10 DC 10 10 10 DC C T . n
B 2 11 DA 11 11 11 DA A T . n
B 2 12 DT 12 12 12 DT T T . n
B 2 13 DC 13 13 13 DC C T . n
B 2 14 DA 14 14 14 DA A T . n
B 2 15 DG 15 15 15 DG G T . n
B 2 16 DC 16 16 16 DC C T . n
C 3 1 DG 1 1 1 DG G P . n
C 3 2 DC 2 2 2 DC C P . n
C 3 3 DT 3 3 3 DT T P . n
C 3 4 DG 4 4 4 DG G P . n
C 3 5 DA 5 5 5 DA A P . n
C 3 6 DT 6 6 6 DT T P . n
C 3 7 DG 7 7 7 DG G P . n
C 3 8 DC 8 8 8 DC C P . n
C 3 9 DG 9 9 9 DG G P . n
C 3 10 DC 10 10 10 DC C P . n
D 4 1 DG 1 1 1 DG G D . n
D 4 2 DT 2 2 2 DT T D . n
D 4 3 DC 3 3 3 DC C D . n
D 4 4 DG 4 4 4 DG G D . n
D 4 5 DG 5 5 5 DG G D . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 4BD 1 346 338 4BD 4BD A .
F 6 MG 1 347 339 MG MG A .
G 6 MG 1 348 340 MG MG A .
H 7 NA 1 349 341 NA NA A .
I 7 NA 1 350 342 NA NA A .
J 8 CL 1 351 343 CL CL A .
K 8 CL 1 352 344 CL CL A .
L 9 HOH 1 1 1 HOH HOH A .
L 9 HOH 2 2 2 HOH HOH A .
L 9 HOH 3 3 3 HOH HOH A .
L 9 HOH 4 4 4 HOH HOH A .
L 9 HOH 5 5 5 HOH HOH A .
L 9 HOH 6 6 6 HOH HOH A .
L 9 HOH 7 7 7 HOH HOH A .
L 9 HOH 8 8 8 HOH HOH A .
L 9 HOH 9 9 9 HOH HOH A .
L 9 HOH 10 353 11 HOH HOH A .
L 9 HOH 11 354 12 HOH HOH A .
L 9 HOH 12 355 355 HOH HOH A .
L 9 HOH 13 356 356 HOH HOH A .
L 9 HOH 14 357 357 HOH HOH A .
L 9 HOH 15 358 358 HOH HOH A .
L 9 HOH 16 359 359 HOH HOH A .
L 9 HOH 17 360 360 HOH HOH A .
L 9 HOH 18 361 13 HOH HOH A .
L 9 HOH 19 362 14 HOH HOH A .
L 9 HOH 20 363 363 HOH HOH A .
L 9 HOH 21 364 364 HOH HOH A .
L 9 HOH 22 365 365 HOH HOH A .
L 9 HOH 23 366 366 HOH HOH A .
L 9 HOH 24 367 367 HOH HOH A .
L 9 HOH 25 368 368 HOH HOH A .
L 9 HOH 26 369 369 HOH HOH A .
L 9 HOH 27 370 370 HOH HOH A .
L 9 HOH 28 371 16 HOH HOH A .
L 9 HOH 29 372 17 HOH HOH A .
L 9 HOH 30 373 373 HOH HOH A .
L 9 HOH 31 374 374 HOH HOH A .
L 9 HOH 32 375 375 HOH HOH A .
L 9 HOH 33 376 376 HOH HOH A .
L 9 HOH 34 377 377 HOH HOH A .
L 9 HOH 35 378 378 HOH HOH A .
L 9 HOH 36 379 379 HOH HOH A .
L 9 HOH 37 380 380 HOH HOH A .
L 9 HOH 38 381 18 HOH HOH A .
L 9 HOH 39 382 382 HOH HOH A .
L 9 HOH 40 383 19 HOH HOH A .
L 9 HOH 41 384 384 HOH HOH A .
L 9 HOH 42 385 385 HOH HOH A .
L 9 HOH 43 386 386 HOH HOH A .
L 9 HOH 44 387 387 HOH HOH A .
L 9 HOH 45 388 388 HOH HOH A .
L 9 HOH 46 389 389 HOH HOH A .
L 9 HOH 47 390 390 HOH HOH A .
L 9 HOH 48 391 391 HOH HOH A .
L 9 HOH 49 392 392 HOH HOH A .
L 9 HOH 50 393 393 HOH HOH A .
L 9 HOH 51 394 394 HOH HOH A .
L 9 HOH 52 395 395 HOH HOH A .
L 9 HOH 53 396 396 HOH HOH A .
L 9 HOH 54 397 397 HOH HOH A .
L 9 HOH 55 398 398 HOH HOH A .
L 9 HOH 56 399 399 HOH HOH A .
L 9 HOH 57 400 400 HOH HOH A .
L 9 HOH 58 401 401 HOH HOH A .
L 9 HOH 59 402 402 HOH HOH A .
L 9 HOH 60 403 403 HOH HOH A .
L 9 HOH 61 404 404 HOH HOH A .
L 9 HOH 62 405 405 HOH HOH A .
L 9 HOH 63 406 406 HOH HOH A .
L 9 HOH 64 407 407 HOH HOH A .
L 9 HOH 65 408 408 HOH HOH A .
L 9 HOH 66 409 409 HOH HOH A .
L 9 HOH 67 410 20 HOH HOH A .
L 9 HOH 68 411 411 HOH HOH A .
L 9 HOH 69 412 21 HOH HOH A .
L 9 HOH 70 413 22 HOH HOH A .
L 9 HOH 71 414 23 HOH HOH A .
L 9 HOH 72 415 24 HOH HOH A .
L 9 HOH 73 416 25 HOH HOH A .
L 9 HOH 74 417 26 HOH HOH A .
L 9 HOH 75 418 27 HOH HOH A .
L 9 HOH 76 419 28 HOH HOH A .
L 9 HOH 77 420 29 HOH HOH A .
L 9 HOH 78 421 30 HOH HOH A .
L 9 HOH 79 422 32 HOH HOH A .
L 9 HOH 80 423 33 HOH HOH A .
L 9 HOH 81 424 34 HOH HOH A .
L 9 HOH 82 425 36 HOH HOH A .
L 9 HOH 83 426 38 HOH HOH A .
L 9 HOH 84 427 39 HOH HOH A .
L 9 HOH 85 428 40 HOH HOH A .
L 9 HOH 86 429 41 HOH HOH A .
L 9 HOH 87 430 42 HOH HOH A .
L 9 HOH 88 431 43 HOH HOH A .
L 9 HOH 89 432 44 HOH HOH A .
L 9 HOH 90 433 46 HOH HOH A .
L 9 HOH 91 434 47 HOH HOH A .
L 9 HOH 92 435 48 HOH HOH A .
L 9 HOH 93 436 49 HOH HOH A .
L 9 HOH 94 437 50 HOH HOH A .
L 9 HOH 95 438 51 HOH HOH A .
L 9 HOH 96 439 53 HOH HOH A .
L 9 HOH 97 440 54 HOH HOH A .
L 9 HOH 98 441 57 HOH HOH A .
L 9 HOH 99 442 58 HOH HOH A .
L 9 HOH 100 443 60 HOH HOH A .
L 9 HOH 101 444 61 HOH HOH A .
L 9 HOH 102 445 62 HOH HOH A .
L 9 HOH 103 446 64 HOH HOH A .
L 9 HOH 104 447 65 HOH HOH A .
L 9 HOH 105 448 66 HOH HOH A .
L 9 HOH 106 449 67 HOH HOH A .
L 9 HOH 107 450 68 HOH HOH A .
L 9 HOH 108 451 69 HOH HOH A .
L 9 HOH 109 452 70 HOH HOH A .
L 9 HOH 110 453 71 HOH HOH A .
L 9 HOH 111 454 72 HOH HOH A .
L 9 HOH 112 455 73 HOH HOH A .
L 9 HOH 113 456 74 HOH HOH A .
L 9 HOH 114 457 75 HOH HOH A .
L 9 HOH 115 458 76 HOH HOH A .
L 9 HOH 116 459 77 HOH HOH A .
L 9 HOH 117 460 79 HOH HOH A .
L 9 HOH 118 461 80 HOH HOH A .
L 9 HOH 119 462 81 HOH HOH A .
L 9 HOH 120 463 82 HOH HOH A .
L 9 HOH 121 464 84 HOH HOH A .
L 9 HOH 122 465 85 HOH HOH A .
L 9 HOH 123 466 86 HOH HOH A .
L 9 HOH 124 467 87 HOH HOH A .
L 9 HOH 125 468 88 HOH HOH A .
L 9 HOH 126 469 89 HOH HOH A .
L 9 HOH 127 470 90 HOH HOH A .
L 9 HOH 128 471 91 HOH HOH A .
L 9 HOH 129 472 92 HOH HOH A .
L 9 HOH 130 473 93 HOH HOH A .
L 9 HOH 131 474 98 HOH HOH A .
L 9 HOH 132 475 99 HOH HOH A .
L 9 HOH 133 476 100 HOH HOH A .
L 9 HOH 134 477 103 HOH HOH A .
L 9 HOH 135 478 104 HOH HOH A .
L 9 HOH 136 479 105 HOH HOH A .
L 9 HOH 137 480 106 HOH HOH A .
L 9 HOH 138 481 108 HOH HOH A .
L 9 HOH 139 482 109 HOH HOH A .
L 9 HOH 140 483 110 HOH HOH A .
L 9 HOH 141 484 111 HOH HOH A .
L 9 HOH 142 485 112 HOH HOH A .
L 9 HOH 143 486 113 HOH HOH A .
L 9 HOH 144 487 115 HOH HOH A .
L 9 HOH 145 488 116 HOH HOH A .
L 9 HOH 146 489 117 HOH HOH A .
L 9 HOH 147 490 118 HOH HOH A .
L 9 HOH 148 491 119 HOH HOH A .
L 9 HOH 149 492 120 HOH HOH A .
L 9 HOH 150 493 121 HOH HOH A .
L 9 HOH 151 494 122 HOH HOH A .
L 9 HOH 152 495 123 HOH HOH A .
L 9 HOH 153 496 124 HOH HOH A .
L 9 HOH 154 497 126 HOH HOH A .
L 9 HOH 155 498 127 HOH HOH A .
L 9 HOH 156 499 128 HOH HOH A .
L 9 HOH 157 500 131 HOH HOH A .
L 9 HOH 158 501 132 HOH HOH A .
L 9 HOH 159 502 134 HOH HOH A .
L 9 HOH 160 503 135 HOH HOH A .
L 9 HOH 161 504 137 HOH HOH A .
L 9 HOH 162 505 138 HOH HOH A .
L 9 HOH 163 506 139 HOH HOH A .
L 9 HOH 164 507 140 HOH HOH A .
L 9 HOH 165 508 141 HOH HOH A .
L 9 HOH 166 509 142 HOH HOH A .
L 9 HOH 167 510 143 HOH HOH A .
L 9 HOH 168 511 145 HOH HOH A .
L 9 HOH 169 512 146 HOH HOH A .
L 9 HOH 170 513 147 HOH HOH A .
L 9 HOH 171 514 149 HOH HOH A .
L 9 HOH 172 515 150 HOH HOH A .
L 9 HOH 173 516 151 HOH HOH A .
L 9 HOH 174 517 152 HOH HOH A .
L 9 HOH 175 518 153 HOH HOH A .
L 9 HOH 176 519 154 HOH HOH A .
L 9 HOH 177 520 155 HOH HOH A .
L 9 HOH 178 521 156 HOH HOH A .
L 9 HOH 179 522 157 HOH HOH A .
L 9 HOH 180 523 158 HOH HOH A .
L 9 HOH 181 524 160 HOH HOH A .
L 9 HOH 182 525 161 HOH HOH A .
L 9 HOH 183 526 162 HOH HOH A .
L 9 HOH 184 527 163 HOH HOH A .
L 9 HOH 185 528 164 HOH HOH A .
L 9 HOH 186 529 165 HOH HOH A .
L 9 HOH 187 530 166 HOH HOH A .
L 9 HOH 188 531 169 HOH HOH A .
L 9 HOH 189 532 170 HOH HOH A .
L 9 HOH 190 533 171 HOH HOH A .
L 9 HOH 191 534 172 HOH HOH A .
L 9 HOH 192 535 176 HOH HOH A .
L 9 HOH 193 536 300 HOH HOH A .
L 9 HOH 194 537 301 HOH HOH A .
L 9 HOH 195 538 302 HOH HOH A .
L 9 HOH 196 539 305 HOH HOH A .
L 9 HOH 197 540 306 HOH HOH A .
L 9 HOH 198 541 308 HOH HOH A .
L 9 HOH 199 542 310 HOH HOH A .
L 9 HOH 200 543 312 HOH HOH A .
L 9 HOH 201 544 313 HOH HOH A .
L 9 HOH 202 545 314 HOH HOH A .
L 9 HOH 203 546 316 HOH HOH A .
L 9 HOH 204 547 317 HOH HOH A .
L 9 HOH 205 548 318 HOH HOH A .
L 9 HOH 206 549 319 HOH HOH A .
L 9 HOH 207 550 320 HOH HOH A .
L 9 HOH 208 551 321 HOH HOH A .
L 9 HOH 209 552 323 HOH HOH A .
L 9 HOH 210 553 324 HOH HOH A .
L 9 HOH 211 554 325 HOH HOH A .
L 9 HOH 212 555 326 HOH HOH A .
L 9 HOH 213 556 327 HOH HOH A .
L 9 HOH 214 557 328 HOH HOH A .
L 9 HOH 215 558 329 HOH HOH A .
L 9 HOH 216 559 330 HOH HOH A .
L 9 HOH 217 560 334 HOH HOH A .
L 9 HOH 218 561 335 HOH HOH A .
L 9 HOH 219 562 336 HOH HOH A .
L 9 HOH 220 563 339 HOH HOH A .
L 9 HOH 221 564 340 HOH HOH A .
L 9 HOH 222 565 341 HOH HOH A .
L 9 HOH 223 566 342 HOH HOH A .
L 9 HOH 224 567 343 HOH HOH A .
L 9 HOH 225 568 344 HOH HOH A .
M 9 HOH 1 17 10 HOH HOH T .
M 9 HOH 2 18 15 HOH HOH T .
M 9 HOH 3 35 35 HOH HOH T .
M 9 HOH 4 59 59 HOH HOH T .
M 9 HOH 5 83 83 HOH HOH T .
M 9 HOH 6 95 95 HOH HOH T .
M 9 HOH 7 97 97 HOH HOH T .
M 9 HOH 8 101 101 HOH HOH T .
M 9 HOH 9 102 102 HOH HOH T .
M 9 HOH 10 114 114 HOH HOH T .
M 9 HOH 11 125 125 HOH HOH T .
M 9 HOH 12 136 136 HOH HOH T .
M 9 HOH 13 148 148 HOH HOH T .
M 9 HOH 14 167 167 HOH HOH T .
M 9 HOH 15 168 168 HOH HOH T .
M 9 HOH 16 173 173 HOH HOH T .
M 9 HOH 17 174 174 HOH HOH T .
M 9 HOH 18 304 304 HOH HOH T .
M 9 HOH 19 315 315 HOH HOH T .
M 9 HOH 20 322 322 HOH HOH T .
M 9 HOH 21 351 351 HOH HOH T .
M 9 HOH 22 352 352 HOH HOH T .
M 9 HOH 23 353 353 HOH HOH T .
M 9 HOH 24 354 354 HOH HOH T .
M 9 HOH 25 361 361 HOH HOH T .
M 9 HOH 26 362 362 HOH HOH T .
M 9 HOH 27 383 383 HOH HOH T .
M 9 HOH 28 410 410 HOH HOH T .
N 9 HOH 1 45 45 HOH HOH P .
N 9 HOH 2 56 56 HOH HOH P .
N 9 HOH 3 63 63 HOH HOH P .
N 9 HOH 4 78 78 HOH HOH P .
N 9 HOH 5 107 107 HOH HOH P .
N 9 HOH 6 129 129 HOH HOH P .
N 9 HOH 7 133 133 HOH HOH P .
N 9 HOH 8 144 144 HOH HOH P .
N 9 HOH 9 159 159 HOH HOH P .
N 9 HOH 10 175 175 HOH HOH P .
N 9 HOH 11 303 303 HOH HOH P .
N 9 HOH 12 337 337 HOH HOH P .
O 9 HOH 1 31 31 HOH HOH D .
O 9 HOH 2 37 37 HOH HOH D .
O 9 HOH 3 52 52 HOH HOH D .
O 9 HOH 4 55 55 HOH HOH D .
O 9 HOH 5 94 94 HOH HOH D .
O 9 HOH 6 96 96 HOH HOH D .
O 9 HOH 7 130 130 HOH HOH D .
O 9 HOH 8 331 331 HOH HOH D .
O 9 HOH 9 338 338 HOH HOH D .
O 9 HOH 10 371 371 HOH HOH D .
O 9 HOH 11 372 372 HOH HOH D .
O 9 HOH 12 381 381 HOH HOH D .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details tetrameric
_pdbx_struct_assembly.oligomeric_count 4
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 6090 ?
1 MORE -92 ?
1 'SSA (A^2)' 19900 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? L HOH . ? A HOH 1 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 OD1 ? A ASP 181 ? A ASP 190 ? 1_555 84.1 ?
2 O ? L HOH . ? A HOH 1 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 OD2 ? A ASP 183 ? A ASP 192 ? 1_555 86.5 ?
3 OD1 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 OD2 ? A ASP 183 ? A ASP 192 ? 1_555 108.1 ?
4 O ? L HOH . ? A HOH 1 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 162.6 ?
5 OD1 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 112.9 ?
6 OD2 ? A ASP 183 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 84.5 ?
7 O ? L HOH . ? A HOH 1 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O2B ? E 4BD . ? A 4BD 346 ? 1_555 78.8 ?
8 OD1 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O2B ? E 4BD . ? A 4BD 346 ? 1_555 160.8 ?
9 OD2 ? A ASP 183 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O2B ? E 4BD . ? A 4BD 346 ? 1_555 79.7 ?
10 O1A ? E 4BD . ? A 4BD 346 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O2B ? E 4BD . ? A 4BD 346 ? 1_555 85.0 ?
11 O ? L HOH . ? A HOH 1 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O3G ? E 4BD . ? A 4BD 346 ? 1_555 91.2 ?
12 OD1 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O3G ? E 4BD . ? A 4BD 346 ? 1_555 87.2 ?
13 OD2 ? A ASP 183 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O3G ? E 4BD . ? A 4BD 346 ? 1_555 164.2 ?
14 O1A ? E 4BD . ? A 4BD 346 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O3G ? E 4BD . ? A 4BD 346 ? 1_555 93.5 ?
15 O2B ? E 4BD . ? A 4BD 346 ? 1_555 MG ? F MG . ? A MG 347 ? 1_555 O3G ? E 4BD . ? A 4BD 346 ? 1_555 84.5 ?
16 O ? L HOH . ? A HOH 2 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 OD2 ? A ASP 181 ? A ASP 190 ? 1_555 81.3 ?
17 O ? L HOH . ? A HOH 2 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 OD1 ? A ASP 183 ? A ASP 192 ? 1_555 165.8 ?
18 OD2 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 OD1 ? A ASP 183 ? A ASP 192 ? 1_555 88.8 ?
19 O ? L HOH . ? A HOH 2 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 OD2 ? A ASP 247 ? A ASP 256 ? 1_555 93.0 ?
20 OD2 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 OD2 ? A ASP 247 ? A ASP 256 ? 1_555 92.9 ?
21 OD1 ? A ASP 183 ? A ASP 192 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 OD2 ? A ASP 247 ? A ASP 256 ? 1_555 97.5 ?
22 O ? L HOH . ? A HOH 2 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 78.5 ?
23 OD2 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 92.0 ?
24 OD1 ? A ASP 183 ? A ASP 192 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 91.9 ?
25 OD2 ? A ASP 247 ? A ASP 256 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 O1A ? E 4BD . ? A 4BD 346 ? 1_555 169.5 ?
26 O ? L HOH . ? A HOH 2 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 89.9 ?
27 OD2 ? A ASP 181 ? A ASP 190 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 169.2 ?
28 OD1 ? A ASP 183 ? A ASP 192 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 101.0 ?
29 OD2 ? A ASP 247 ? A ASP 256 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 81.4 ?
30 O1A ? E 4BD . ? A 4BD 346 ? 1_555 MG ? G MG . ? A MG 348 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 92.3 ?
31 O ? A LYS 51 ? A LYS 60 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? A LEU 53 ? A LEU 62 ? 1_555 82.1 ?
32 O ? A LYS 51 ? A LYS 60 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? A VAL 56 ? A VAL 65 ? 1_555 87.7 ?
33 O ? A LEU 53 ? A LEU 62 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? A VAL 56 ? A VAL 65 ? 1_555 90.4 ?
34 O ? A LYS 51 ? A LYS 60 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 172.3 ?
35 O ? A LEU 53 ? A LEU 62 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 96.9 ?
36 O ? A VAL 56 ? A VAL 65 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 84.7 ?
37 O ? A LYS 51 ? A LYS 60 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? O HOH . ? D HOH 55 ? 1_555 93.0 ?
38 O ? A LEU 53 ? A LEU 62 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? O HOH . ? D HOH 55 ? 1_555 169.4 ?
39 O ? A VAL 56 ? A VAL 65 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? O HOH . ? D HOH 55 ? 1_555 80.1 ?
40 OP1 ? D DC 3 ? D DC 3 ? 1_555 NA ? I NA . ? A NA 350 ? 1_555 O ? O HOH . ? D HOH 55 ? 1_555 86.8 ?
41 O ? A THR 92 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? A VAL 94 ? A VAL 103 ? 1_555 93.2 ?
42 O ? A THR 92 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? A ILE 97 ? A ILE 106 ? 1_555 97.4 ?
43 O ? A VAL 94 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? A ILE 97 ? A ILE 106 ? 1_555 88.8 ?
44 O ? A THR 92 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? L HOH . ? A HOH 510 ? 1_555 79.9 ?
45 O ? A VAL 94 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? L HOH . ? A HOH 510 ? 1_555 86.1 ?
46 O ? A ILE 97 ? A ILE 106 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? L HOH . ? A HOH 510 ? 1_555 174.1 ?
47 O ? A THR 92 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 165.6 ?
48 O ? A VAL 94 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 93.4 ?
49 O ? A ILE 97 ? A ILE 106 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 95.5 ?
50 O ? L HOH . ? A HOH 510 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 87.8 ?
51 O ? A THR 92 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? N HOH . ? P HOH 56 ? 1_555 76.3 ?
52 O ? A VAL 94 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? N HOH . ? P HOH 56 ? 1_555 166.9 ?
53 O ? A ILE 97 ? A ILE 106 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? N HOH . ? P HOH 56 ? 1_555 100.2 ?
54 O ? L HOH . ? A HOH 510 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? N HOH . ? P HOH 56 ? 1_555 84.4 ?
55 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? H NA . ? A NA 349 ? 1_555 O ? N HOH . ? P HOH 56 ? 1_555 95.2 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2009-05-05
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2023-09-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Data collection'
3 3 'Structure model' 'Database references'
4 3 'Structure model' 'Derived calculations'
5 3 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' chem_comp_atom
2 3 'Structure model' chem_comp_bond
3 3 'Structure model' database_2
4 3 'Structure model' pdbx_initial_refinement_model
5 3 'Structure model' pdbx_struct_conn_angle
6 3 'Structure model' struct_conn
7 3 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_database_2.pdbx_DOI'
2 3 'Structure model' '_database_2.pdbx_database_accession'
3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'
4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id'
7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id'
8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id'
11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'
12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id'
14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id'
15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'
16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id'
19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id'
20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
22 3 'Structure model' '_pdbx_struct_conn_angle.value'
23 3 'Structure model' '_struct_conn.pdbx_dist_value'
24 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
31 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
37 3 'Structure model' '_struct_conn.ptnr2_label_seq_id'
38 3 'Structure model' '_struct_site.pdbx_auth_asym_id'
39 3 'Structure model' '_struct_site.pdbx_auth_comp_id'
40 3 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
HKL-2000 'data collection' . ? 1
CNS refinement . ? 2
HKL-2000 'data reduction' . ? 3
HKL-2000 'data scaling' . ? 4
CNS phasing . ? 5
#
_pdbx_validate_rmsd_bond.id 1
_pdbx_validate_rmsd_bond.PDB_model_num 1
_pdbx_validate_rmsd_bond.auth_atom_id_1 P
_pdbx_validate_rmsd_bond.auth_asym_id_1 D
_pdbx_validate_rmsd_bond.auth_comp_id_1 DG
_pdbx_validate_rmsd_bond.auth_seq_id_1 1
_pdbx_validate_rmsd_bond.PDB_ins_code_1 ?
_pdbx_validate_rmsd_bond.label_alt_id_1 ?
_pdbx_validate_rmsd_bond.auth_atom_id_2 OP3
_pdbx_validate_rmsd_bond.auth_asym_id_2 D
_pdbx_validate_rmsd_bond.auth_comp_id_2 DG
_pdbx_validate_rmsd_bond.auth_seq_id_2 1
_pdbx_validate_rmsd_bond.PDB_ins_code_2 ?
_pdbx_validate_rmsd_bond.label_alt_id_2 ?
_pdbx_validate_rmsd_bond.bond_value 1.521
_pdbx_validate_rmsd_bond.bond_target_value 1.607
_pdbx_validate_rmsd_bond.bond_deviation -0.086
_pdbx_validate_rmsd_bond.bond_standard_deviation 0.012
_pdbx_validate_rmsd_bond.linker_flag N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ALA A 32 ? ? -115.78 74.89
2 1 ASP A 170 ? ? -172.73 118.04
3 1 CYS A 178 ? ? -110.41 -129.17
4 1 ASP A 190 ? ? -162.65 -169.35
5 1 THR A 205 ? ? -117.66 68.34
6 1 LYS A 206 ? ? -55.00 4.43
7 1 LYS A 209 ? ? 55.88 13.68
8 1 ASP A 246 ? ? 71.00 -22.23
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A LYS 248 ? CG ? A LYS 239 CG
2 1 Y 1 A LYS 248 ? CD ? A LYS 239 CD
3 1 Y 1 A LYS 248 ? CE ? A LYS 239 CE
4 1 Y 1 A LYS 248 ? NZ ? A LYS 239 NZ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
4BD PA P N S 1
4BD O1A O N N 2
4BD O2A O N N 3
4BD C3A C N N 4
4BD F1A F N N 5
4BD F2A F N N 6
4BD "O5'" O N N 7
4BD PB P N S 8
4BD O1B O N N 9
4BD O2B O N N 10
4BD O3B O N N 11
4BD PG P N N 12
4BD O1G O N N 13
4BD O2G O N N 14
4BD O3G O N N 15
4BD "C5'" C N N 16
4BD "C4'" C N R 17
4BD "O4'" O N N 18
4BD "C1'" C N R 19
4BD N1 N N N 20
4BD C6 C N N 21
4BD C2 C N N 22
4BD O2 O N N 23
4BD N3 N N N 24
4BD C4 C N N 25
4BD O4 O N N 26
4BD C5 C N N 27
4BD C5M C N N 28
4BD "C2'" C N N 29
4BD "C3'" C N S 30
4BD "O3'" O N N 31
4BD HO1A H N N 32
4BD HO2B H N N 33
4BD HO1G H N N 34
4BD HO3G H N N 35
4BD "H5'" H N N 36
4BD "H5'A" H N N 37
4BD "H4'" H N N 38
4BD "H1'" H N N 39
4BD H6 H N N 40
4BD HN3 H N N 41
4BD H5M H N N 42
4BD H5MA H N N 43
4BD H5MB H N N 44
4BD "H2'" H N N 45
4BD "H2'A" H N N 46
4BD "H3'" H N N 47
4BD "HO3'" H N N 48
ALA N N N N 49
ALA CA C N S 50
ALA C C N N 51
ALA O O N N 52
ALA CB C N N 53
ALA OXT O N N 54
ALA H H N N 55
ALA H2 H N N 56
ALA HA H N N 57
ALA HB1 H N N 58
ALA HB2 H N N 59
ALA HB3 H N N 60
ALA HXT H N N 61
ARG N N N N 62
ARG CA C N S 63
ARG C C N N 64
ARG O O N N 65
ARG CB C N N 66
ARG CG C N N 67
ARG CD C N N 68
ARG NE N N N 69
ARG CZ C N N 70
ARG NH1 N N N 71
ARG NH2 N N N 72
ARG OXT O N N 73
ARG H H N N 74
ARG H2 H N N 75
ARG HA H N N 76
ARG HB2 H N N 77
ARG HB3 H N N 78
ARG HG2 H N N 79
ARG HG3 H N N 80
ARG HD2 H N N 81
ARG HD3 H N N 82
ARG HE H N N 83
ARG HH11 H N N 84
ARG HH12 H N N 85
ARG HH21 H N N 86
ARG HH22 H N N 87
ARG HXT H N N 88
ASN N N N N 89
ASN CA C N S 90
ASN C C N N 91
ASN O O N N 92
ASN CB C N N 93
ASN CG C N N 94
ASN OD1 O N N 95
ASN ND2 N N N 96
ASN OXT O N N 97
ASN H H N N 98
ASN H2 H N N 99
ASN HA H N N 100
ASN HB2 H N N 101
ASN HB3 H N N 102
ASN HD21 H N N 103
ASN HD22 H N N 104
ASN HXT H N N 105
ASP N N N N 106
ASP CA C N S 107
ASP C C N N 108
ASP O O N N 109
ASP CB C N N 110
ASP CG C N N 111
ASP OD1 O N N 112
ASP OD2 O N N 113
ASP OXT O N N 114
ASP H H N N 115
ASP H2 H N N 116
ASP HA H N N 117
ASP HB2 H N N 118
ASP HB3 H N N 119
ASP HD2 H N N 120
ASP HXT H N N 121
CL CL CL N N 122
CYS N N N N 123
CYS CA C N R 124
CYS C C N N 125
CYS O O N N 126
CYS CB C N N 127
CYS SG S N N 128
CYS OXT O N N 129
CYS H H N N 130
CYS H2 H N N 131
CYS HA H N N 132
CYS HB2 H N N 133
CYS HB3 H N N 134
CYS HG H N N 135
CYS HXT H N N 136
DA OP3 O N N 137
DA P P N N 138
DA OP1 O N N 139
DA OP2 O N N 140
DA "O5'" O N N 141
DA "C5'" C N N 142
DA "C4'" C N R 143
DA "O4'" O N N 144
DA "C3'" C N S 145
DA "O3'" O N N 146
DA "C2'" C N N 147
DA "C1'" C N R 148
DA N9 N Y N 149
DA C8 C Y N 150
DA N7 N Y N 151
DA C5 C Y N 152
DA C6 C Y N 153
DA N6 N N N 154
DA N1 N Y N 155
DA C2 C Y N 156
DA N3 N Y N 157
DA C4 C Y N 158
DA HOP3 H N N 159
DA HOP2 H N N 160
DA "H5'" H N N 161
DA "H5''" H N N 162
DA "H4'" H N N 163
DA "H3'" H N N 164
DA "HO3'" H N N 165
DA "H2'" H N N 166
DA "H2''" H N N 167
DA "H1'" H N N 168
DA H8 H N N 169
DA H61 H N N 170
DA H62 H N N 171
DA H2 H N N 172
DC OP3 O N N 173
DC P P N N 174
DC OP1 O N N 175
DC OP2 O N N 176
DC "O5'" O N N 177
DC "C5'" C N N 178
DC "C4'" C N R 179
DC "O4'" O N N 180
DC "C3'" C N S 181
DC "O3'" O N N 182
DC "C2'" C N N 183
DC "C1'" C N R 184
DC N1 N N N 185
DC C2 C N N 186
DC O2 O N N 187
DC N3 N N N 188
DC C4 C N N 189
DC N4 N N N 190
DC C5 C N N 191
DC C6 C N N 192
DC HOP3 H N N 193
DC HOP2 H N N 194
DC "H5'" H N N 195
DC "H5''" H N N 196
DC "H4'" H N N 197
DC "H3'" H N N 198
DC "HO3'" H N N 199
DC "H2'" H N N 200
DC "H2''" H N N 201
DC "H1'" H N N 202
DC H41 H N N 203
DC H42 H N N 204
DC H5 H N N 205
DC H6 H N N 206
DG OP3 O N N 207
DG P P N N 208
DG OP1 O N N 209
DG OP2 O N N 210
DG "O5'" O N N 211
DG "C5'" C N N 212
DG "C4'" C N R 213
DG "O4'" O N N 214
DG "C3'" C N S 215
DG "O3'" O N N 216
DG "C2'" C N N 217
DG "C1'" C N R 218
DG N9 N Y N 219
DG C8 C Y N 220
DG N7 N Y N 221
DG C5 C Y N 222
DG C6 C N N 223
DG O6 O N N 224
DG N1 N N N 225
DG C2 C N N 226
DG N2 N N N 227
DG N3 N N N 228
DG C4 C Y N 229
DG HOP3 H N N 230
DG HOP2 H N N 231
DG "H5'" H N N 232
DG "H5''" H N N 233
DG "H4'" H N N 234
DG "H3'" H N N 235
DG "HO3'" H N N 236
DG "H2'" H N N 237
DG "H2''" H N N 238
DG "H1'" H N N 239
DG H8 H N N 240
DG H1 H N N 241
DG H21 H N N 242
DG H22 H N N 243
DT OP3 O N N 244
DT P P N N 245
DT OP1 O N N 246
DT OP2 O N N 247
DT "O5'" O N N 248
DT "C5'" C N N 249
DT "C4'" C N R 250
DT "O4'" O N N 251
DT "C3'" C N S 252
DT "O3'" O N N 253
DT "C2'" C N N 254
DT "C1'" C N R 255
DT N1 N N N 256
DT C2 C N N 257
DT O2 O N N 258
DT N3 N N N 259
DT C4 C N N 260
DT O4 O N N 261
DT C5 C N N 262
DT C7 C N N 263
DT C6 C N N 264
DT HOP3 H N N 265
DT HOP2 H N N 266
DT "H5'" H N N 267
DT "H5''" H N N 268
DT "H4'" H N N 269
DT "H3'" H N N 270
DT "HO3'" H N N 271
DT "H2'" H N N 272
DT "H2''" H N N 273
DT "H1'" H N N 274
DT H3 H N N 275
DT H71 H N N 276
DT H72 H N N 277
DT H73 H N N 278
DT H6 H N N 279
GLN N N N N 280
GLN CA C N S 281
GLN C C N N 282
GLN O O N N 283
GLN CB C N N 284
GLN CG C N N 285
GLN CD C N N 286
GLN OE1 O N N 287
GLN NE2 N N N 288
GLN OXT O N N 289
GLN H H N N 290
GLN H2 H N N 291
GLN HA H N N 292
GLN HB2 H N N 293
GLN HB3 H N N 294
GLN HG2 H N N 295
GLN HG3 H N N 296
GLN HE21 H N N 297
GLN HE22 H N N 298
GLN HXT H N N 299
GLU N N N N 300
GLU CA C N S 301
GLU C C N N 302
GLU O O N N 303
GLU CB C N N 304
GLU CG C N N 305
GLU CD C N N 306
GLU OE1 O N N 307
GLU OE2 O N N 308
GLU OXT O N N 309
GLU H H N N 310
GLU H2 H N N 311
GLU HA H N N 312
GLU HB2 H N N 313
GLU HB3 H N N 314
GLU HG2 H N N 315
GLU HG3 H N N 316
GLU HE2 H N N 317
GLU HXT H N N 318
GLY N N N N 319
GLY CA C N N 320
GLY C C N N 321
GLY O O N N 322
GLY OXT O N N 323
GLY H H N N 324
GLY H2 H N N 325
GLY HA2 H N N 326
GLY HA3 H N N 327
GLY HXT H N N 328
HIS N N N N 329
HIS CA C N S 330
HIS C C N N 331
HIS O O N N 332
HIS CB C N N 333
HIS CG C Y N 334
HIS ND1 N Y N 335
HIS CD2 C Y N 336
HIS CE1 C Y N 337
HIS NE2 N Y N 338
HIS OXT O N N 339
HIS H H N N 340
HIS H2 H N N 341
HIS HA H N N 342
HIS HB2 H N N 343
HIS HB3 H N N 344
HIS HD1 H N N 345
HIS HD2 H N N 346
HIS HE1 H N N 347
HIS HE2 H N N 348
HIS HXT H N N 349
HOH O O N N 350
HOH H1 H N N 351
HOH H2 H N N 352
ILE N N N N 353
ILE CA C N S 354
ILE C C N N 355
ILE O O N N 356
ILE CB C N S 357
ILE CG1 C N N 358
ILE CG2 C N N 359
ILE CD1 C N N 360
ILE OXT O N N 361
ILE H H N N 362
ILE H2 H N N 363
ILE HA H N N 364
ILE HB H N N 365
ILE HG12 H N N 366
ILE HG13 H N N 367
ILE HG21 H N N 368
ILE HG22 H N N 369
ILE HG23 H N N 370
ILE HD11 H N N 371
ILE HD12 H N N 372
ILE HD13 H N N 373
ILE HXT H N N 374
LEU N N N N 375
LEU CA C N S 376
LEU C C N N 377
LEU O O N N 378
LEU CB C N N 379
LEU CG C N N 380
LEU CD1 C N N 381
LEU CD2 C N N 382
LEU OXT O N N 383
LEU H H N N 384
LEU H2 H N N 385
LEU HA H N N 386
LEU HB2 H N N 387
LEU HB3 H N N 388
LEU HG H N N 389
LEU HD11 H N N 390
LEU HD12 H N N 391
LEU HD13 H N N 392
LEU HD21 H N N 393
LEU HD22 H N N 394
LEU HD23 H N N 395
LEU HXT H N N 396
LYS N N N N 397
LYS CA C N S 398
LYS C C N N 399
LYS O O N N 400
LYS CB C N N 401
LYS CG C N N 402
LYS CD C N N 403
LYS CE C N N 404
LYS NZ N N N 405
LYS OXT O N N 406
LYS H H N N 407
LYS H2 H N N 408
LYS HA H N N 409
LYS HB2 H N N 410
LYS HB3 H N N 411
LYS HG2 H N N 412
LYS HG3 H N N 413
LYS HD2 H N N 414
LYS HD3 H N N 415
LYS HE2 H N N 416
LYS HE3 H N N 417
LYS HZ1 H N N 418
LYS HZ2 H N N 419
LYS HZ3 H N N 420
LYS HXT H N N 421
MET N N N N 422
MET CA C N S 423
MET C C N N 424
MET O O N N 425
MET CB C N N 426
MET CG C N N 427
MET SD S N N 428
MET CE C N N 429
MET OXT O N N 430
MET H H N N 431
MET H2 H N N 432
MET HA H N N 433
MET HB2 H N N 434
MET HB3 H N N 435
MET HG2 H N N 436
MET HG3 H N N 437
MET HE1 H N N 438
MET HE2 H N N 439
MET HE3 H N N 440
MET HXT H N N 441
MG MG MG N N 442
NA NA NA N N 443
PHE N N N N 444
PHE CA C N S 445
PHE C C N N 446
PHE O O N N 447
PHE CB C N N 448
PHE CG C Y N 449
PHE CD1 C Y N 450
PHE CD2 C Y N 451
PHE CE1 C Y N 452
PHE CE2 C Y N 453
PHE CZ C Y N 454
PHE OXT O N N 455
PHE H H N N 456
PHE H2 H N N 457
PHE HA H N N 458
PHE HB2 H N N 459
PHE HB3 H N N 460
PHE HD1 H N N 461
PHE HD2 H N N 462
PHE HE1 H N N 463
PHE HE2 H N N 464
PHE HZ H N N 465
PHE HXT H N N 466
PRO N N N N 467
PRO CA C N S 468
PRO C C N N 469
PRO O O N N 470
PRO CB C N N 471
PRO CG C N N 472
PRO CD C N N 473
PRO OXT O N N 474
PRO H H N N 475
PRO HA H N N 476
PRO HB2 H N N 477
PRO HB3 H N N 478
PRO HG2 H N N 479
PRO HG3 H N N 480
PRO HD2 H N N 481
PRO HD3 H N N 482
PRO HXT H N N 483
SER N N N N 484
SER CA C N S 485
SER C C N N 486
SER O O N N 487
SER CB C N N 488
SER OG O N N 489
SER OXT O N N 490
SER H H N N 491
SER H2 H N N 492
SER HA H N N 493
SER HB2 H N N 494
SER HB3 H N N 495
SER HG H N N 496
SER HXT H N N 497
THR N N N N 498
THR CA C N S 499
THR C C N N 500
THR O O N N 501
THR CB C N R 502
THR OG1 O N N 503
THR CG2 C N N 504
THR OXT O N N 505
THR H H N N 506
THR H2 H N N 507
THR HA H N N 508
THR HB H N N 509
THR HG1 H N N 510
THR HG21 H N N 511
THR HG22 H N N 512
THR HG23 H N N 513
THR HXT H N N 514
TRP N N N N 515
TRP CA C N S 516
TRP C C N N 517
TRP O O N N 518
TRP CB C N N 519
TRP CG C Y N 520
TRP CD1 C Y N 521
TRP CD2 C Y N 522
TRP NE1 N Y N 523
TRP CE2 C Y N 524
TRP CE3 C Y N 525
TRP CZ2 C Y N 526
TRP CZ3 C Y N 527
TRP CH2 C Y N 528
TRP OXT O N N 529
TRP H H N N 530
TRP H2 H N N 531
TRP HA H N N 532
TRP HB2 H N N 533
TRP HB3 H N N 534
TRP HD1 H N N 535
TRP HE1 H N N 536
TRP HE3 H N N 537
TRP HZ2 H N N 538
TRP HZ3 H N N 539
TRP HH2 H N N 540
TRP HXT H N N 541
TYR N N N N 542
TYR CA C N S 543
TYR C C N N 544
TYR O O N N 545
TYR CB C N N 546
TYR CG C Y N 547
TYR CD1 C Y N 548
TYR CD2 C Y N 549
TYR CE1 C Y N 550
TYR CE2 C Y N 551
TYR CZ C Y N 552
TYR OH O N N 553
TYR OXT O N N 554
TYR H H N N 555
TYR H2 H N N 556
TYR HA H N N 557
TYR HB2 H N N 558
TYR HB3 H N N 559
TYR HD1 H N N 560
TYR HD2 H N N 561
TYR HE1 H N N 562
TYR HE2 H N N 563
TYR HH H N N 564
TYR HXT H N N 565
VAL N N N N 566
VAL CA C N S 567
VAL C C N N 568
VAL O O N N 569
VAL CB C N N 570
VAL CG1 C N N 571
VAL CG2 C N N 572
VAL OXT O N N 573
VAL H H N N 574
VAL H2 H N N 575
VAL HA H N N 576
VAL HB H N N 577
VAL HG11 H N N 578
VAL HG12 H N N 579
VAL HG13 H N N 580
VAL HG21 H N N 581
VAL HG22 H N N 582
VAL HG23 H N N 583
VAL HXT H N N 584
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4BD "O5'" PA sing N N 1
4BD C3A PA sing N N 2
4BD PA O2A doub N N 3
4BD PA O1A sing N N 4
4BD O1A HO1A sing N N 5
4BD F1A C3A sing N N 6
4BD PB C3A sing N N 7
4BD C3A F2A sing N N 8
4BD "C5'" "O5'" sing N N 9
4BD O1B PB doub N N 10
4BD PB O2B sing N N 11
4BD PB O3B sing N N 12
4BD O2B HO2B sing N N 13
4BD O3B PG sing N N 14
4BD PG O2G doub N N 15
4BD PG O1G sing N N 16
4BD PG O3G sing N N 17
4BD O1G HO1G sing N N 18
4BD O3G HO3G sing N N 19
4BD "C4'" "C5'" sing N N 20
4BD "C5'" "H5'" sing N N 21
4BD "C5'" "H5'A" sing N N 22
4BD "C3'" "C4'" sing N N 23
4BD "O4'" "C4'" sing N N 24
4BD "C4'" "H4'" sing N N 25
4BD "C1'" "O4'" sing N N 26
4BD "C2'" "C1'" sing N N 27
4BD "C1'" N1 sing N N 28
4BD "C1'" "H1'" sing N N 29
4BD C2 N1 sing N N 30
4BD N1 C6 sing N N 31
4BD C6 C5 doub N N 32
4BD C6 H6 sing N N 33
4BD O2 C2 doub N N 34
4BD C2 N3 sing N N 35
4BD N3 C4 sing N N 36
4BD N3 HN3 sing N N 37
4BD C4 O4 doub N N 38
4BD C4 C5 sing N N 39
4BD C5 C5M sing N N 40
4BD C5M H5M sing N N 41
4BD C5M H5MA sing N N 42
4BD C5M H5MB sing N N 43
4BD "C2'" "C3'" sing N N 44
4BD "C2'" "H2'" sing N N 45
4BD "C2'" "H2'A" sing N N 46
4BD "O3'" "C3'" sing N N 47
4BD "C3'" "H3'" sing N N 48
4BD "O3'" "HO3'" sing N N 49
ALA N CA sing N N 50
ALA N H sing N N 51
ALA N H2 sing N N 52
ALA CA C sing N N 53
ALA CA CB sing N N 54
ALA CA HA sing N N 55
ALA C O doub N N 56
ALA C OXT sing N N 57
ALA CB HB1 sing N N 58
ALA CB HB2 sing N N 59
ALA CB HB3 sing N N 60
ALA OXT HXT sing N N 61
ARG N CA sing N N 62
ARG N H sing N N 63
ARG N H2 sing N N 64
ARG CA C sing N N 65
ARG CA CB sing N N 66
ARG CA HA sing N N 67
ARG C O doub N N 68
ARG C OXT sing N N 69
ARG CB CG sing N N 70
ARG CB HB2 sing N N 71
ARG CB HB3 sing N N 72
ARG CG CD sing N N 73
ARG CG HG2 sing N N 74
ARG CG HG3 sing N N 75
ARG CD NE sing N N 76
ARG CD HD2 sing N N 77
ARG CD HD3 sing N N 78
ARG NE CZ sing N N 79
ARG NE HE sing N N 80
ARG CZ NH1 sing N N 81
ARG CZ NH2 doub N N 82
ARG NH1 HH11 sing N N 83
ARG NH1 HH12 sing N N 84
ARG NH2 HH21 sing N N 85
ARG NH2 HH22 sing N N 86
ARG OXT HXT sing N N 87
ASN N CA sing N N 88
ASN N H sing N N 89
ASN N H2 sing N N 90
ASN CA C sing N N 91
ASN CA CB sing N N 92
ASN CA HA sing N N 93
ASN C O doub N N 94
ASN C OXT sing N N 95
ASN CB CG sing N N 96
ASN CB HB2 sing N N 97
ASN CB HB3 sing N N 98
ASN CG OD1 doub N N 99
ASN CG ND2 sing N N 100
ASN ND2 HD21 sing N N 101
ASN ND2 HD22 sing N N 102
ASN OXT HXT sing N N 103
ASP N CA sing N N 104
ASP N H sing N N 105
ASP N H2 sing N N 106
ASP CA C sing N N 107
ASP CA CB sing N N 108
ASP CA HA sing N N 109
ASP C O doub N N 110
ASP C OXT sing N N 111
ASP CB CG sing N N 112
ASP CB HB2 sing N N 113
ASP CB HB3 sing N N 114
ASP CG OD1 doub N N 115
ASP CG OD2 sing N N 116
ASP OD2 HD2 sing N N 117
ASP OXT HXT sing N N 118
CYS N CA sing N N 119
CYS N H sing N N 120
CYS N H2 sing N N 121
CYS CA C sing N N 122
CYS CA CB sing N N 123
CYS CA HA sing N N 124
CYS C O doub N N 125
CYS C OXT sing N N 126
CYS CB SG sing N N 127
CYS CB HB2 sing N N 128
CYS CB HB3 sing N N 129
CYS SG HG sing N N 130
CYS OXT HXT sing N N 131
DA OP3 P sing N N 132
DA OP3 HOP3 sing N N 133
DA P OP1 doub N N 134
DA P OP2 sing N N 135
DA P "O5'" sing N N 136
DA OP2 HOP2 sing N N 137
DA "O5'" "C5'" sing N N 138
DA "C5'" "C4'" sing N N 139
DA "C5'" "H5'" sing N N 140
DA "C5'" "H5''" sing N N 141
DA "C4'" "O4'" sing N N 142
DA "C4'" "C3'" sing N N 143
DA "C4'" "H4'" sing N N 144
DA "O4'" "C1'" sing N N 145
DA "C3'" "O3'" sing N N 146
DA "C3'" "C2'" sing N N 147
DA "C3'" "H3'" sing N N 148
DA "O3'" "HO3'" sing N N 149
DA "C2'" "C1'" sing N N 150
DA "C2'" "H2'" sing N N 151
DA "C2'" "H2''" sing N N 152
DA "C1'" N9 sing N N 153
DA "C1'" "H1'" sing N N 154
DA N9 C8 sing Y N 155
DA N9 C4 sing Y N 156
DA C8 N7 doub Y N 157
DA C8 H8 sing N N 158
DA N7 C5 sing Y N 159
DA C5 C6 sing Y N 160
DA C5 C4 doub Y N 161
DA C6 N6 sing N N 162
DA C6 N1 doub Y N 163
DA N6 H61 sing N N 164
DA N6 H62 sing N N 165
DA N1 C2 sing Y N 166
DA C2 N3 doub Y N 167
DA C2 H2 sing N N 168
DA N3 C4 sing Y N 169
DC OP3 P sing N N 170
DC OP3 HOP3 sing N N 171
DC P OP1 doub N N 172
DC P OP2 sing N N 173
DC P "O5'" sing N N 174
DC OP2 HOP2 sing N N 175
DC "O5'" "C5'" sing N N 176
DC "C5'" "C4'" sing N N 177
DC "C5'" "H5'" sing N N 178
DC "C5'" "H5''" sing N N 179
DC "C4'" "O4'" sing N N 180
DC "C4'" "C3'" sing N N 181
DC "C4'" "H4'" sing N N 182
DC "O4'" "C1'" sing N N 183
DC "C3'" "O3'" sing N N 184
DC "C3'" "C2'" sing N N 185
DC "C3'" "H3'" sing N N 186
DC "O3'" "HO3'" sing N N 187
DC "C2'" "C1'" sing N N 188
DC "C2'" "H2'" sing N N 189
DC "C2'" "H2''" sing N N 190
DC "C1'" N1 sing N N 191
DC "C1'" "H1'" sing N N 192
DC N1 C2 sing N N 193
DC N1 C6 sing N N 194
DC C2 O2 doub N N 195
DC C2 N3 sing N N 196
DC N3 C4 doub N N 197
DC C4 N4 sing N N 198
DC C4 C5 sing N N 199
DC N4 H41 sing N N 200
DC N4 H42 sing N N 201
DC C5 C6 doub N N 202
DC C5 H5 sing N N 203
DC C6 H6 sing N N 204
DG OP3 P sing N N 205
DG OP3 HOP3 sing N N 206
DG P OP1 doub N N 207
DG P OP2 sing N N 208
DG P "O5'" sing N N 209
DG OP2 HOP2 sing N N 210
DG "O5'" "C5'" sing N N 211
DG "C5'" "C4'" sing N N 212
DG "C5'" "H5'" sing N N 213
DG "C5'" "H5''" sing N N 214
DG "C4'" "O4'" sing N N 215
DG "C4'" "C3'" sing N N 216
DG "C4'" "H4'" sing N N 217
DG "O4'" "C1'" sing N N 218
DG "C3'" "O3'" sing N N 219
DG "C3'" "C2'" sing N N 220
DG "C3'" "H3'" sing N N 221
DG "O3'" "HO3'" sing N N 222
DG "C2'" "C1'" sing N N 223
DG "C2'" "H2'" sing N N 224
DG "C2'" "H2''" sing N N 225
DG "C1'" N9 sing N N 226
DG "C1'" "H1'" sing N N 227
DG N9 C8 sing Y N 228
DG N9 C4 sing Y N 229
DG C8 N7 doub Y N 230
DG C8 H8 sing N N 231
DG N7 C5 sing Y N 232
DG C5 C6 sing N N 233
DG C5 C4 doub Y N 234
DG C6 O6 doub N N 235
DG C6 N1 sing N N 236
DG N1 C2 sing N N 237
DG N1 H1 sing N N 238
DG C2 N2 sing N N 239
DG C2 N3 doub N N 240
DG N2 H21 sing N N 241
DG N2 H22 sing N N 242
DG N3 C4 sing N N 243
DT OP3 P sing N N 244
DT OP3 HOP3 sing N N 245
DT P OP1 doub N N 246
DT P OP2 sing N N 247
DT P "O5'" sing N N 248
DT OP2 HOP2 sing N N 249
DT "O5'" "C5'" sing N N 250
DT "C5'" "C4'" sing N N 251
DT "C5'" "H5'" sing N N 252
DT "C5'" "H5''" sing N N 253
DT "C4'" "O4'" sing N N 254
DT "C4'" "C3'" sing N N 255
DT "C4'" "H4'" sing N N 256
DT "O4'" "C1'" sing N N 257
DT "C3'" "O3'" sing N N 258
DT "C3'" "C2'" sing N N 259
DT "C3'" "H3'" sing N N 260
DT "O3'" "HO3'" sing N N 261
DT "C2'" "C1'" sing N N 262
DT "C2'" "H2'" sing N N 263
DT "C2'" "H2''" sing N N 264
DT "C1'" N1 sing N N 265
DT "C1'" "H1'" sing N N 266
DT N1 C2 sing N N 267
DT N1 C6 sing N N 268
DT C2 O2 doub N N 269
DT C2 N3 sing N N 270
DT N3 C4 sing N N 271
DT N3 H3 sing N N 272
DT C4 O4 doub N N 273
DT C4 C5 sing N N 274
DT C5 C7 sing N N 275
DT C5 C6 doub N N 276
DT C7 H71 sing N N 277
DT C7 H72 sing N N 278
DT C7 H73 sing N N 279
DT C6 H6 sing N N 280
GLN N CA sing N N 281
GLN N H sing N N 282
GLN N H2 sing N N 283
GLN CA C sing N N 284
GLN CA CB sing N N 285
GLN CA HA sing N N 286
GLN C O doub N N 287
GLN C OXT sing N N 288
GLN CB CG sing N N 289
GLN CB HB2 sing N N 290
GLN CB HB3 sing N N 291
GLN CG CD sing N N 292
GLN CG HG2 sing N N 293
GLN CG HG3 sing N N 294
GLN CD OE1 doub N N 295
GLN CD NE2 sing N N 296
GLN NE2 HE21 sing N N 297
GLN NE2 HE22 sing N N 298
GLN OXT HXT sing N N 299
GLU N CA sing N N 300
GLU N H sing N N 301
GLU N H2 sing N N 302
GLU CA C sing N N 303
GLU CA CB sing N N 304
GLU CA HA sing N N 305
GLU C O doub N N 306
GLU C OXT sing N N 307
GLU CB CG sing N N 308
GLU CB HB2 sing N N 309
GLU CB HB3 sing N N 310
GLU CG CD sing N N 311
GLU CG HG2 sing N N 312
GLU CG HG3 sing N N 313
GLU CD OE1 doub N N 314
GLU CD OE2 sing N N 315
GLU OE2 HE2 sing N N 316
GLU OXT HXT sing N N 317
GLY N CA sing N N 318
GLY N H sing N N 319
GLY N H2 sing N N 320
GLY CA C sing N N 321
GLY CA HA2 sing N N 322
GLY CA HA3 sing N N 323
GLY C O doub N N 324
GLY C OXT sing N N 325
GLY OXT HXT sing N N 326
HIS N CA sing N N 327
HIS N H sing N N 328
HIS N H2 sing N N 329
HIS CA C sing N N 330
HIS CA CB sing N N 331
HIS CA HA sing N N 332
HIS C O doub N N 333
HIS C OXT sing N N 334
HIS CB CG sing N N 335
HIS CB HB2 sing N N 336
HIS CB HB3 sing N N 337
HIS CG ND1 sing Y N 338
HIS CG CD2 doub Y N 339
HIS ND1 CE1 doub Y N 340
HIS ND1 HD1 sing N N 341
HIS CD2 NE2 sing Y N 342
HIS CD2 HD2 sing N N 343
HIS CE1 NE2 sing Y N 344
HIS CE1 HE1 sing N N 345
HIS NE2 HE2 sing N N 346
HIS OXT HXT sing N N 347
HOH O H1 sing N N 348
HOH O H2 sing N N 349
ILE N CA sing N N 350
ILE N H sing N N 351
ILE N H2 sing N N 352
ILE CA C sing N N 353
ILE CA CB sing N N 354
ILE CA HA sing N N 355
ILE C O doub N N 356
ILE C OXT sing N N 357
ILE CB CG1 sing N N 358
ILE CB CG2 sing N N 359
ILE CB HB sing N N 360
ILE CG1 CD1 sing N N 361
ILE CG1 HG12 sing N N 362
ILE CG1 HG13 sing N N 363
ILE CG2 HG21 sing N N 364
ILE CG2 HG22 sing N N 365
ILE CG2 HG23 sing N N 366
ILE CD1 HD11 sing N N 367
ILE CD1 HD12 sing N N 368
ILE CD1 HD13 sing N N 369
ILE OXT HXT sing N N 370
LEU N CA sing N N 371
LEU N H sing N N 372
LEU N H2 sing N N 373
LEU CA C sing N N 374
LEU CA CB sing N N 375
LEU CA HA sing N N 376
LEU C O doub N N 377
LEU C OXT sing N N 378
LEU CB CG sing N N 379
LEU CB HB2 sing N N 380
LEU CB HB3 sing N N 381
LEU CG CD1 sing N N 382
LEU CG CD2 sing N N 383
LEU CG HG sing N N 384
LEU CD1 HD11 sing N N 385
LEU CD1 HD12 sing N N 386
LEU CD1 HD13 sing N N 387
LEU CD2 HD21 sing N N 388
LEU CD2 HD22 sing N N 389
LEU CD2 HD23 sing N N 390
LEU OXT HXT sing N N 391
LYS N CA sing N N 392
LYS N H sing N N 393
LYS N H2 sing N N 394
LYS CA C sing N N 395
LYS CA CB sing N N 396
LYS CA HA sing N N 397
LYS C O doub N N 398
LYS C OXT sing N N 399
LYS CB CG sing N N 400
LYS CB HB2 sing N N 401
LYS CB HB3 sing N N 402
LYS CG CD sing N N 403
LYS CG HG2 sing N N 404
LYS CG HG3 sing N N 405
LYS CD CE sing N N 406
LYS CD HD2 sing N N 407
LYS CD HD3 sing N N 408
LYS CE NZ sing N N 409
LYS CE HE2 sing N N 410
LYS CE HE3 sing N N 411
LYS NZ HZ1 sing N N 412
LYS NZ HZ2 sing N N 413
LYS NZ HZ3 sing N N 414
LYS OXT HXT sing N N 415
MET N CA sing N N 416
MET N H sing N N 417
MET N H2 sing N N 418
MET CA C sing N N 419
MET CA CB sing N N 420
MET CA HA sing N N 421
MET C O doub N N 422
MET C OXT sing N N 423
MET CB CG sing N N 424
MET CB HB2 sing N N 425
MET CB HB3 sing N N 426
MET CG SD sing N N 427
MET CG HG2 sing N N 428
MET CG HG3 sing N N 429
MET SD CE sing N N 430
MET CE HE1 sing N N 431
MET CE HE2 sing N N 432
MET CE HE3 sing N N 433
MET OXT HXT sing N N 434
PHE N CA sing N N 435
PHE N H sing N N 436
PHE N H2 sing N N 437
PHE CA C sing N N 438
PHE CA CB sing N N 439
PHE CA HA sing N N 440
PHE C O doub N N 441
PHE C OXT sing N N 442
PHE CB CG sing N N 443
PHE CB HB2 sing N N 444
PHE CB HB3 sing N N 445
PHE CG CD1 doub Y N 446
PHE CG CD2 sing Y N 447
PHE CD1 CE1 sing Y N 448
PHE CD1 HD1 sing N N 449
PHE CD2 CE2 doub Y N 450
PHE CD2 HD2 sing N N 451
PHE CE1 CZ doub Y N 452
PHE CE1 HE1 sing N N 453
PHE CE2 CZ sing Y N 454
PHE CE2 HE2 sing N N 455
PHE CZ HZ sing N N 456
PHE OXT HXT sing N N 457
PRO N CA sing N N 458
PRO N CD sing N N 459
PRO N H sing N N 460
PRO CA C sing N N 461
PRO CA CB sing N N 462
PRO CA HA sing N N 463
PRO C O doub N N 464
PRO C OXT sing N N 465
PRO CB CG sing N N 466
PRO CB HB2 sing N N 467
PRO CB HB3 sing N N 468
PRO CG CD sing N N 469
PRO CG HG2 sing N N 470
PRO CG HG3 sing N N 471
PRO CD HD2 sing N N 472
PRO CD HD3 sing N N 473
PRO OXT HXT sing N N 474
SER N CA sing N N 475
SER N H sing N N 476
SER N H2 sing N N 477
SER CA C sing N N 478
SER CA CB sing N N 479
SER CA HA sing N N 480
SER C O doub N N 481
SER C OXT sing N N 482
SER CB OG sing N N 483
SER CB HB2 sing N N 484
SER CB HB3 sing N N 485
SER OG HG sing N N 486
SER OXT HXT sing N N 487
THR N CA sing N N 488
THR N H sing N N 489
THR N H2 sing N N 490
THR CA C sing N N 491
THR CA CB sing N N 492
THR CA HA sing N N 493
THR C O doub N N 494
THR C OXT sing N N 495
THR CB OG1 sing N N 496
THR CB CG2 sing N N 497
THR CB HB sing N N 498
THR OG1 HG1 sing N N 499
THR CG2 HG21 sing N N 500
THR CG2 HG22 sing N N 501
THR CG2 HG23 sing N N 502
THR OXT HXT sing N N 503
TRP N CA sing N N 504
TRP N H sing N N 505
TRP N H2 sing N N 506
TRP CA C sing N N 507
TRP CA CB sing N N 508
TRP CA HA sing N N 509
TRP C O doub N N 510
TRP C OXT sing N N 511
TRP CB CG sing N N 512
TRP CB HB2 sing N N 513
TRP CB HB3 sing N N 514
TRP CG CD1 doub Y N 515
TRP CG CD2 sing Y N 516
TRP CD1 NE1 sing Y N 517
TRP CD1 HD1 sing N N 518
TRP CD2 CE2 doub Y N 519
TRP CD2 CE3 sing Y N 520
TRP NE1 CE2 sing Y N 521
TRP NE1 HE1 sing N N 522
TRP CE2 CZ2 sing Y N 523
TRP CE3 CZ3 doub Y N 524
TRP CE3 HE3 sing N N 525
TRP CZ2 CH2 doub Y N 526
TRP CZ2 HZ2 sing N N 527
TRP CZ3 CH2 sing Y N 528
TRP CZ3 HZ3 sing N N 529
TRP CH2 HH2 sing N N 530
TRP OXT HXT sing N N 531
TYR N CA sing N N 532
TYR N H sing N N 533
TYR N H2 sing N N 534
TYR CA C sing N N 535
TYR CA CB sing N N 536
TYR CA HA sing N N 537
TYR C O doub N N 538
TYR C OXT sing N N 539
TYR CB CG sing N N 540
TYR CB HB2 sing N N 541
TYR CB HB3 sing N N 542
TYR CG CD1 doub Y N 543
TYR CG CD2 sing Y N 544
TYR CD1 CE1 sing Y N 545
TYR CD1 HD1 sing N N 546
TYR CD2 CE2 doub Y N 547
TYR CD2 HD2 sing N N 548
TYR CE1 CZ doub Y N 549
TYR CE1 HE1 sing N N 550
TYR CE2 CZ sing Y N 551
TYR CE2 HE2 sing N N 552
TYR CZ OH sing N N 553
TYR OH HH sing N N 554
TYR OXT HXT sing N N 555
VAL N CA sing N N 556
VAL N H sing N N 557
VAL N H2 sing N N 558
VAL CA C sing N N 559
VAL CA CB sing N N 560
VAL CA HA sing N N 561
VAL C O doub N N 562
VAL C OXT sing N N 563
VAL CB CG1 sing N N 564
VAL CB CG2 sing N N 565
VAL CB HB sing N N 566
VAL CG1 HG11 sing N N 567
VAL CG1 HG12 sing N N 568
VAL CG1 HG13 sing N N 569
VAL CG2 HG21 sing N N 570
VAL CG2 HG22 sing N N 571
VAL CG2 HG23 sing N N 572
VAL OXT HXT sing N N 573
#
loop_
_ndb_struct_conf_na.entry_id
_ndb_struct_conf_na.feature
3GDX 'double helix'
3GDX 'b-form double helix'
#
loop_
_ndb_struct_na_base_pair.model_number
_ndb_struct_na_base_pair.i_label_asym_id
_ndb_struct_na_base_pair.i_label_comp_id
_ndb_struct_na_base_pair.i_label_seq_id
_ndb_struct_na_base_pair.i_symmetry
_ndb_struct_na_base_pair.j_label_asym_id
_ndb_struct_na_base_pair.j_label_comp_id
_ndb_struct_na_base_pair.j_label_seq_id
_ndb_struct_na_base_pair.j_symmetry
_ndb_struct_na_base_pair.shear
_ndb_struct_na_base_pair.stretch
_ndb_struct_na_base_pair.stagger
_ndb_struct_na_base_pair.buckle
_ndb_struct_na_base_pair.propeller
_ndb_struct_na_base_pair.opening
_ndb_struct_na_base_pair.pair_number
_ndb_struct_na_base_pair.pair_name
_ndb_struct_na_base_pair.i_auth_asym_id
_ndb_struct_na_base_pair.i_auth_seq_id
_ndb_struct_na_base_pair.i_PDB_ins_code
_ndb_struct_na_base_pair.j_auth_asym_id
_ndb_struct_na_base_pair.j_auth_seq_id
_ndb_struct_na_base_pair.j_PDB_ins_code
_ndb_struct_na_base_pair.hbond_type_28
_ndb_struct_na_base_pair.hbond_type_12
1 B DC 1 1_555 D DG 5 1_555 0.135 -0.176 0.220 -13.477 -7.938 -3.701 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1
1 B DC 2 1_555 D DG 4 1_555 0.667 -0.280 0.069 -1.058 -9.491 1.194 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1
1 B DG 3 1_555 D DC 3 1_555 -0.357 -0.137 0.183 1.442 -21.805 6.571 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1
1 B DA 4 1_555 D DT 2 1_555 0.042 -0.096 0.086 3.959 -10.529 -1.864 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1
1 B DC 5 1_555 D DG 1 1_555 -0.020 -0.017 -0.645 16.935 0.500 -1.339 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1
1 B DG 7 1_555 C DC 10 1_555 -0.435 -0.124 0.498 13.250 -3.054 3.050 6 T_DG7:DC10_P T 7 ? P 10 ? 19 1
1 B DC 8 1_555 C DG 9 1_555 0.240 -0.154 -0.676 18.764 -6.428 2.475 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1
1 B DG 9 1_555 C DC 8 1_555 -0.347 -0.151 -0.181 -1.914 -0.790 0.207 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1
1 B DC 10 1_555 C DG 7 1_555 0.363 -0.217 -0.039 1.669 -4.454 -1.616 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1
1 B DA 11 1_555 C DT 6 1_555 0.204 -0.039 0.226 1.270 -13.822 2.777 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1
1 B DT 12 1_555 C DA 5 1_555 0.251 -0.153 -0.038 5.023 -11.320 0.336 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1
1 B DC 13 1_555 C DG 4 1_555 -0.088 -0.209 -0.092 -2.216 -9.206 -1.291 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1
1 B DA 14 1_555 C DT 3 1_555 -0.067 -0.146 -0.083 -2.436 -8.487 -4.101 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1
1 B DG 15 1_555 C DC 2 1_555 -0.291 -0.178 0.378 6.825 -9.608 0.486 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1
1 B DC 16 1_555 C DG 1 1_555 0.528 -0.324 0.423 8.970 -12.614 -0.319 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1
#
loop_
_ndb_struct_na_base_pair_step.model_number
_ndb_struct_na_base_pair_step.i_label_asym_id_1
_ndb_struct_na_base_pair_step.i_label_comp_id_1
_ndb_struct_na_base_pair_step.i_label_seq_id_1
_ndb_struct_na_base_pair_step.i_symmetry_1
_ndb_struct_na_base_pair_step.j_label_asym_id_1
_ndb_struct_na_base_pair_step.j_label_comp_id_1
_ndb_struct_na_base_pair_step.j_label_seq_id_1
_ndb_struct_na_base_pair_step.j_symmetry_1
_ndb_struct_na_base_pair_step.i_label_asym_id_2
_ndb_struct_na_base_pair_step.i_label_comp_id_2
_ndb_struct_na_base_pair_step.i_label_seq_id_2
_ndb_struct_na_base_pair_step.i_symmetry_2
_ndb_struct_na_base_pair_step.j_label_asym_id_2
_ndb_struct_na_base_pair_step.j_label_comp_id_2
_ndb_struct_na_base_pair_step.j_label_seq_id_2
_ndb_struct_na_base_pair_step.j_symmetry_2
_ndb_struct_na_base_pair_step.shift
_ndb_struct_na_base_pair_step.slide
_ndb_struct_na_base_pair_step.rise
_ndb_struct_na_base_pair_step.tilt
_ndb_struct_na_base_pair_step.roll
_ndb_struct_na_base_pair_step.twist
_ndb_struct_na_base_pair_step.x_displacement
_ndb_struct_na_base_pair_step.y_displacement
_ndb_struct_na_base_pair_step.helical_rise
_ndb_struct_na_base_pair_step.inclination
_ndb_struct_na_base_pair_step.tip
_ndb_struct_na_base_pair_step.helical_twist
_ndb_struct_na_base_pair_step.step_number
_ndb_struct_na_base_pair_step.step_name
_ndb_struct_na_base_pair_step.i_auth_asym_id_1
_ndb_struct_na_base_pair_step.i_auth_seq_id_1
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1
_ndb_struct_na_base_pair_step.j_auth_asym_id_1
_ndb_struct_na_base_pair_step.j_auth_seq_id_1
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1
_ndb_struct_na_base_pair_step.i_auth_asym_id_2
_ndb_struct_na_base_pair_step.i_auth_seq_id_2
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2
_ndb_struct_na_base_pair_step.j_auth_asym_id_2
_ndb_struct_na_base_pair_step.j_auth_seq_id_2
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2
1 B DC 1 1_555 D DG 5 1_555 B DC 2 1_555 D DG 4 1_555 -0.252 0.299 3.020 2.818 7.930 32.645 -0.687 0.862 2.977 13.823
-4.911 33.683 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ?
1 B DC 2 1_555 D DG 4 1_555 B DG 3 1_555 D DC 3 1_555 0.138 1.646 3.443 -3.222 3.637 33.566 2.193 -0.794 3.568 6.256 5.543
33.905 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ?
1 B DG 3 1_555 D DC 3 1_555 B DA 4 1_555 D DT 2 1_555 -0.178 0.033 3.218 -0.619 -1.702 36.755 0.280 0.200 3.216 -2.698 0.981
36.798 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ?
1 B DA 4 1_555 D DT 2 1_555 B DC 5 1_555 D DG 1 1_555 0.785 -0.405 2.970 6.215 5.718 25.380 -2.251 -0.205 2.917 12.579
-13.671 26.727 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ?
1 B DG 7 1_555 C DC 10 1_555 B DC 8 1_555 C DG 9 1_555 0.505 -0.472 3.251 7.665 4.403 34.668 -1.407 0.286 3.205 7.244
-12.611 35.744 5 TT_DG7DC8:DG9DC10_PP T 7 ? P 10 ? T 8 ? P 9 ?
1 B DC 8 1_555 C DG 9 1_555 B DG 9 1_555 C DC 8 1_555 -1.238 -0.294 3.846 -6.173 8.261 36.474 -1.725 0.958 3.843 12.885 9.628
37.856 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ?
1 B DG 9 1_555 C DC 8 1_555 B DC 10 1_555 C DG 7 1_555 -0.668 -0.463 3.289 -1.223 3.784 33.459 -1.416 0.954 3.241 6.543 2.114
33.688 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ?
1 B DC 10 1_555 C DG 7 1_555 B DA 11 1_555 C DT 6 1_555 -0.086 -0.177 3.225 -2.411 6.757 37.031 -1.133 -0.174 3.145 10.518 3.753
37.695 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ?
1 B DA 11 1_555 C DT 6 1_555 B DT 12 1_555 C DA 5 1_555 0.090 -0.756 3.216 0.927 -0.018 29.731 -1.470 0.015 3.218 -0.035
-1.807 29.745 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ?
1 B DT 12 1_555 C DA 5 1_555 B DC 13 1_555 C DG 4 1_555 0.166 -0.197 3.307 1.777 2.370 35.843 -0.661 -0.014 3.292 3.842
-2.881 35.961 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ?
1 B DC 13 1_555 C DG 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.427 0.108 3.298 0.801 10.589 34.537 -1.345 0.805 3.183 17.334
-1.311 36.085 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ?
1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 0.399 -0.129 3.049 -4.573 5.961 31.066 -1.229 -1.489 2.889 10.931 8.384
31.940 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ?
1 B DG 15 1_555 C DC 2 1_555 B DC 16 1_555 C DG 1 1_555 0.355 -0.718 3.130 -1.173 3.408 39.579 -1.431 -0.651 3.049 5.021 1.729
39.736 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
5 "5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]thymidine" 4BD
6 'MAGNESIUM ION' MG
7 'SODIUM ION' NA
8 'CHLORIDE ION' CL
9 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 2FMS
_pdbx_initial_refinement_model.details 'PDB entry 2FMS'
#