HEADER CIRCADIAN CLOCK PROTEIN 25-FEB-09 3GEC TITLE CRYSTAL STRUCTURE OF A TANDEM PAS DOMAIN FRAGMENT OF DROSOPHILA PERIOD COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIOD CIRCADIAN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAS DOMAIN; COMPND 5 SYNONYM: PROTEIN CLOCK-6, CLK-6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: PER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P2 KEYWDS MONOMERIC PAS REPEAT FRAGMENT, CIRCADIAN CLOCK PROTEIN, ALTERNATIVE KEYWDS 2 SPLICING, BIOLOGICAL RHYTHMS, CYTOPLASM, NUCLEUS, PHOSPHOPROTEIN, KEYWDS 3 POLYMORPHISM EXPDTA X-RAY DIFFRACTION AUTHOR O.YILDIZ,E.WOLF REVDAT 2 01-NOV-23 3GEC 1 SEQADV REVDAT 1 16-JUN-09 3GEC 0 JRNL AUTH S.HENNIG,H.M.STRAUSS,K.VANSELOW,O.YILDIZ,S.SCHULZE,J.ARENS, JRNL AUTH 2 A.KRAMER,E.WOLF JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSES OF PAS DOMAIN JRNL TITL 2 INTERACTIONS OF THE CLOCK PROTEINS DROSOPHILA PERIOD AND JRNL TITL 3 MOUSE PERIOD2 JRNL REF PLOS BIOL. V. 7 E94 2009 JRNL REFN ISSN 1544-9173 JRNL PMID 19402751 JRNL DOI 10.1371/JOURNAL.PBIO.1000094 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 5576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.312 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 279 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE : 0.4480 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 34 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.077 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2054 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 136.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 151.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 22.01000 REMARK 3 B22 (A**2) : 22.01000 REMARK 3 B33 (A**2) : -44.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.81 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.51 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.44 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GEC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5578 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 18.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.42200 REMARK 200 R SYM FOR SHELL (I) : 0.46900 REMARK 200 FOR SHELL : 3.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1WA9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 70MM SODIUMTARTRATE, 20MM HEPES, 5MM REMARK 280 DTE, PH 7.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 282K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.13333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.56667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.56667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.13333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 227 REMARK 465 PRO A 228 REMARK 465 LEU A 229 REMARK 465 GLY A 230 REMARK 465 SER A 231 REMARK 465 GLY A 232 REMARK 465 GLU A 233 REMARK 465 ARG A 234 REMARK 465 VAL A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 295 REMARK 465 ILE A 296 REMARK 465 ALA A 297 REMARK 465 GLU A 298 REMARK 465 SER A 299 REMARK 465 ARG A 300 REMARK 465 GLY A 301 REMARK 465 SER A 302 REMARK 465 VAL A 303 REMARK 465 PRO A 304 REMARK 465 LYS A 305 REMARK 465 ASP A 306 REMARK 465 ALA A 307 REMARK 465 LYS A 308 REMARK 465 LEU A 321 REMARK 465 LYS A 322 REMARK 465 SER A 323 REMARK 465 GLY A 324 REMARK 465 GLY A 325 REMARK 465 PHE A 326 REMARK 465 GLY A 327 REMARK 465 VAL A 328 REMARK 465 ILE A 329 REMARK 465 GLY A 330 REMARK 465 ARG A 331 REMARK 465 PRO A 332 REMARK 465 VAL A 333 REMARK 465 ALA A 347 REMARK 465 PRO A 348 REMARK 465 GLU A 349 REMARK 465 GLU A 350 REMARK 465 ALA A 351 REMARK 465 ARG A 352 REMARK 465 PRO A 353 REMARK 465 ASP A 354 REMARK 465 ASN A 355 REMARK 465 TYR A 356 REMARK 465 MET A 357 REMARK 465 VAL A 358 REMARK 465 SER A 359 REMARK 465 ASN A 360 REMARK 465 GLY A 361 REMARK 465 THR A 362 REMARK 465 ASN A 363 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ALA A 450 O ALA A 450 6765 1.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 265 C - N - CA ANGL. DEV. = 11.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 239 -157.06 -123.75 REMARK 500 PHE A 240 157.13 177.97 REMARK 500 ILE A 244 -157.28 165.28 REMARK 500 SER A 245 -119.12 172.72 REMARK 500 ASP A 248 -41.19 -174.73 REMARK 500 ILE A 250 -158.88 56.16 REMARK 500 LEU A 252 -61.14 -96.02 REMARK 500 THR A 254 62.88 -163.10 REMARK 500 THR A 255 119.73 -5.76 REMARK 500 PRO A 256 2.58 -57.06 REMARK 500 ASP A 260 -80.37 -110.86 REMARK 500 PRO A 265 160.78 -46.66 REMARK 500 ARG A 266 -81.45 -57.71 REMARK 500 ASP A 267 -8.76 -58.43 REMARK 500 LEU A 270 -17.57 -41.78 REMARK 500 ILE A 275 -36.38 -21.50 REMARK 500 HIS A 279 141.71 -34.49 REMARK 500 LYS A 281 -80.83 -60.22 REMARK 500 ARG A 283 -48.42 -27.95 REMARK 500 PHE A 286 -72.86 -54.79 REMARK 500 ALA A 287 8.07 -54.66 REMARK 500 THR A 310 146.96 70.82 REMARK 500 PHE A 311 145.02 179.52 REMARK 500 ARG A 317 -170.61 -56.20 REMARK 500 TYR A 335 137.12 -22.82 REMARK 500 ALA A 370 91.98 -69.36 REMARK 500 SER A 376 -30.75 -33.12 REMARK 500 VAL A 379 -144.93 -118.04 REMARK 500 PRO A 380 -110.40 -105.42 REMARK 500 ASP A 381 66.71 -65.52 REMARK 500 LEU A 384 141.36 -31.59 REMARK 500 SER A 385 -132.82 -71.24 REMARK 500 SER A 388 126.90 -16.67 REMARK 500 PRO A 389 160.08 -44.52 REMARK 500 SER A 402 -84.20 -89.65 REMARK 500 ASP A 405 160.93 -39.09 REMARK 500 ALA A 407 -5.89 -51.81 REMARK 500 PRO A 416 -68.91 -22.29 REMARK 500 LEU A 419 -95.07 -92.76 REMARK 500 ILE A 420 75.65 -0.14 REMARK 500 TYR A 428 150.27 -30.64 REMARK 500 GLU A 431 22.13 -58.36 REMARK 500 ASP A 432 -40.96 -135.12 REMARK 500 THR A 442 -8.17 -46.47 REMARK 500 MET A 444 -64.04 -97.62 REMARK 500 ALA A 450 23.11 -64.77 REMARK 500 PRO A 458 126.66 -32.99 REMARK 500 PHE A 461 129.29 -172.28 REMARK 500 ILE A 463 -157.07 -87.80 REMARK 500 GLU A 472 60.36 -108.99 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 377 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WA9 RELATED DB: PDB REMARK 900 C-TERMINALLY EXTENDED PAS REPEAT FRAGMENT DBREF 3GEC A 232 538 UNP P07663 PER_DROME 232 538 SEQADV 3GEC GLY A 227 UNP P07663 EXPRESSION TAG SEQADV 3GEC PRO A 228 UNP P07663 EXPRESSION TAG SEQADV 3GEC LEU A 229 UNP P07663 EXPRESSION TAG SEQADV 3GEC GLY A 230 UNP P07663 EXPRESSION TAG SEQADV 3GEC SER A 231 UNP P07663 EXPRESSION TAG SEQRES 1 A 312 GLY PRO LEU GLY SER GLY GLU ARG VAL LYS GLU ASP SER SEQRES 2 A 312 PHE CYS CYS VAL ILE SER MET HIS ASP GLY ILE VAL LEU SEQRES 3 A 312 TYR THR THR PRO SER ILE THR ASP VAL LEU GLY TYR PRO SEQRES 4 A 312 ARG ASP MET TRP LEU GLY ARG SER PHE ILE ASP PHE VAL SEQRES 5 A 312 HIS LEU LYS ASP ARG ALA THR PHE ALA SER GLN ILE THR SEQRES 6 A 312 THR GLY ILE PRO ILE ALA GLU SER ARG GLY SER VAL PRO SEQRES 7 A 312 LYS ASP ALA LYS SER THR PHE CYS VAL MET LEU ARG ARG SEQRES 8 A 312 TYR ARG GLY LEU LYS SER GLY GLY PHE GLY VAL ILE GLY SEQRES 9 A 312 ARG PRO VAL SER TYR GLU PRO PHE ARG LEU GLY LEU THR SEQRES 10 A 312 PHE ARG GLU ALA PRO GLU GLU ALA ARG PRO ASP ASN TYR SEQRES 11 A 312 MET VAL SER ASN GLY THR ASN MET LEU LEU VAL ILE CYS SEQRES 12 A 312 ALA THR PRO ILE LYS SER SER TYR LYS VAL PRO ASP GLU SEQRES 13 A 312 ILE LEU SER GLN LYS SER PRO LYS PHE ALA ILE ARG HIS SEQRES 14 A 312 THR ALA THR GLY ILE ILE SER HIS VAL ASP SER ALA ALA SEQRES 15 A 312 VAL SER ALA LEU GLY TYR LEU PRO GLN ASP LEU ILE GLY SEQRES 16 A 312 ARG SER ILE MET ASP PHE TYR HIS HIS GLU ASP LEU SER SEQRES 17 A 312 VAL MET LYS GLU THR TYR GLU THR VAL MET LYS LYS GLY SEQRES 18 A 312 GLN THR ALA GLY ALA SER PHE CYS SER LYS PRO TYR ARG SEQRES 19 A 312 PHE LEU ILE GLN ASN GLY CYS TYR VAL LEU LEU GLU THR SEQRES 20 A 312 GLU TRP THR SER PHE VAL ASN PRO TRP SER ARG LYS LEU SEQRES 21 A 312 GLU PHE VAL VAL GLY HIS HIS ARG VAL PHE GLN GLY PRO SEQRES 22 A 312 LYS GLN CYS ASN VAL PHE GLU ALA ALA PRO THR CYS LYS SEQRES 23 A 312 LEU LYS ILE SER GLU GLU ALA GLN SER ARG ASN THR ARG SEQRES 24 A 312 ILE LYS GLU ASP ILE VAL LYS ARG LEU ALA GLU THR VAL HELIX 1 1 SER A 257 LEU A 262 1 6 HELIX 2 2 PRO A 265 LEU A 270 1 6 HELIX 3 3 SER A 273 PHE A 277 5 5 HELIX 4 4 ASP A 282 ILE A 290 1 9 HELIX 5 5 LEU A 415 LEU A 419 5 5 HELIX 6 6 SER A 423 TYR A 428 1 6 HELIX 7 7 HIS A 429 LYS A 446 1 18 HELIX 8 8 GLY A 447 THR A 449 5 3 HELIX 9 9 ARG A 522 VAL A 531 1 10 SHEET 1 A 3 CYS A 241 ILE A 244 0 SHEET 2 A 3 LEU A 365 CYS A 369 -1 O LEU A 366 N ILE A 244 SHEET 3 A 3 PHE A 344 ARG A 345 -1 N ARG A 345 O LEU A 365 SHEET 1 B 3 PHE A 311 LEU A 315 0 SHEET 2 B 3 GLU A 336 LEU A 340 -1 O GLU A 336 N LEU A 315 SHEET 3 B 3 THR A 371 PRO A 372 -1 O THR A 371 N ARG A 339 SHEET 1 C 4 ILE A 401 VAL A 404 0 SHEET 2 C 4 ILE A 393 THR A 396 -1 N ARG A 394 O SER A 402 SHEET 3 C 4 LEU A 486 HIS A 492 -1 O VAL A 489 N HIS A 395 SHEET 4 C 4 GLU A 474 VAL A 479 -1 N THR A 476 O VAL A 490 SHEET 1 D 3 TYR A 459 LEU A 462 0 SHEET 2 D 3 TYR A 468 LEU A 471 -1 O VAL A 469 N PHE A 461 SHEET 3 D 3 VAL A 495 GLN A 497 -1 O PHE A 496 N LEU A 470 CRYST1 114.950 114.950 85.700 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008699 0.005023 0.000000 0.00000 SCALE2 0.000000 0.010045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011669 0.00000