data_3GEX # _entry.id 3GEX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GEX pdb_00003gex 10.2210/pdb3gex/pdb RCSB RCSB051774 ? ? WWPDB D_1000051774 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-11-10 4 'Structure model' 1 3 2023-11-01 5 'Structure model' 1 4 2023-11-22 6 'Structure model' 1 5 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_chem_comp_atom.atom_id' 6 5 'Structure model' '_chem_comp_bond.atom_id_2' 7 6 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GEX _pdbx_database_status.recvd_initial_deposition_date 2009-02-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hu, X.' 1 'Liu, R.' 2 # _citation.id primary _citation.title '1.6 angstrom crystal structure of fluorescent protein Cypet' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, R.' 1 ? primary 'Ding, Y.' 2 ? primary 'Hu, X.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Green fluorescent protein' 27496.031 1 ? 'T10G, V12I, D20E, A88V, I168A, E173T, L195I' ? ? 2 water nat water 18.015 180 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Cypet # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;LYFQGMVSKGEELFGGIVPILVELEGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTL(CRF)VQCFS RYPDHMKQHDFFKSVMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYISHNVYI TADKQKNGIKANFKARHNITDGSVQLADHYQQNTPIGDGPVILPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHG MDELYK ; _entity_poly.pdbx_seq_one_letter_code_can ;LYFQGMVSKGEELFGGIVPILVELEGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTWGVQCFSRY PDHMKQHDFFKSVMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYISHNVYITA DKQKNGIKANFKARHNITDGSVQLADHYQQNTPIGDGPVILPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMD ELYK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 TYR n 1 3 PHE n 1 4 GLN n 1 5 GLY n 1 6 MET n 1 7 VAL n 1 8 SER n 1 9 LYS n 1 10 GLY n 1 11 GLU n 1 12 GLU n 1 13 LEU n 1 14 PHE n 1 15 GLY n 1 16 GLY n 1 17 ILE n 1 18 VAL n 1 19 PRO n 1 20 ILE n 1 21 LEU n 1 22 VAL n 1 23 GLU n 1 24 LEU n 1 25 GLU n 1 26 GLY n 1 27 ASP n 1 28 VAL n 1 29 ASN n 1 30 GLY n 1 31 HIS n 1 32 LYS n 1 33 PHE n 1 34 SER n 1 35 VAL n 1 36 SER n 1 37 GLY n 1 38 GLU n 1 39 GLY n 1 40 GLU n 1 41 GLY n 1 42 ASP n 1 43 ALA n 1 44 THR n 1 45 TYR n 1 46 GLY n 1 47 LYS n 1 48 LEU n 1 49 THR n 1 50 LEU n 1 51 LYS n 1 52 PHE n 1 53 ILE n 1 54 CYS n 1 55 THR n 1 56 THR n 1 57 GLY n 1 58 LYS n 1 59 LEU n 1 60 PRO n 1 61 VAL n 1 62 PRO n 1 63 TRP n 1 64 PRO n 1 65 THR n 1 66 LEU n 1 67 VAL n 1 68 THR n 1 69 THR n 1 70 LEU n 1 71 CRF n 1 72 VAL n 1 73 GLN n 1 74 CYS n 1 75 PHE n 1 76 SER n 1 77 ARG n 1 78 TYR n 1 79 PRO n 1 80 ASP n 1 81 HIS n 1 82 MET n 1 83 LYS n 1 84 GLN n 1 85 HIS n 1 86 ASP n 1 87 PHE n 1 88 PHE n 1 89 LYS n 1 90 SER n 1 91 VAL n 1 92 MET n 1 93 PRO n 1 94 GLU n 1 95 GLY n 1 96 TYR n 1 97 VAL n 1 98 GLN n 1 99 GLU n 1 100 ARG n 1 101 THR n 1 102 ILE n 1 103 PHE n 1 104 PHE n 1 105 LYS n 1 106 ASP n 1 107 ASP n 1 108 GLY n 1 109 ASN n 1 110 TYR n 1 111 LYS n 1 112 THR n 1 113 ARG n 1 114 ALA n 1 115 GLU n 1 116 VAL n 1 117 LYS n 1 118 PHE n 1 119 GLU n 1 120 GLY n 1 121 ASP n 1 122 THR n 1 123 LEU n 1 124 VAL n 1 125 ASN n 1 126 ARG n 1 127 ILE n 1 128 GLU n 1 129 LEU n 1 130 LYS n 1 131 GLY n 1 132 ILE n 1 133 ASP n 1 134 PHE n 1 135 LYS n 1 136 GLU n 1 137 ASP n 1 138 GLY n 1 139 ASN n 1 140 ILE n 1 141 LEU n 1 142 GLY n 1 143 HIS n 1 144 LYS n 1 145 LEU n 1 146 GLU n 1 147 TYR n 1 148 ASN n 1 149 TYR n 1 150 ILE n 1 151 SER n 1 152 HIS n 1 153 ASN n 1 154 VAL n 1 155 TYR n 1 156 ILE n 1 157 THR n 1 158 ALA n 1 159 ASP n 1 160 LYS n 1 161 GLN n 1 162 LYS n 1 163 ASN n 1 164 GLY n 1 165 ILE n 1 166 LYS n 1 167 ALA n 1 168 ASN n 1 169 PHE n 1 170 LYS n 1 171 ALA n 1 172 ARG n 1 173 HIS n 1 174 ASN n 1 175 ILE n 1 176 THR n 1 177 ASP n 1 178 GLY n 1 179 SER n 1 180 VAL n 1 181 GLN n 1 182 LEU n 1 183 ALA n 1 184 ASP n 1 185 HIS n 1 186 TYR n 1 187 GLN n 1 188 GLN n 1 189 ASN n 1 190 THR n 1 191 PRO n 1 192 ILE n 1 193 GLY n 1 194 ASP n 1 195 GLY n 1 196 PRO n 1 197 VAL n 1 198 ILE n 1 199 LEU n 1 200 PRO n 1 201 ASP n 1 202 ASN n 1 203 HIS n 1 204 TYR n 1 205 LEU n 1 206 SER n 1 207 THR n 1 208 GLN n 1 209 SER n 1 210 ALA n 1 211 LEU n 1 212 SER n 1 213 LYS n 1 214 ASP n 1 215 PRO n 1 216 ASN n 1 217 GLU n 1 218 LYS n 1 219 ARG n 1 220 ASP n 1 221 HIS n 1 222 MET n 1 223 VAL n 1 224 LEU n 1 225 LEU n 1 226 GLU n 1 227 PHE n 1 228 VAL n 1 229 THR n 1 230 ALA n 1 231 ALA n 1 232 GLY n 1 233 ILE n 1 234 THR n 1 235 HIS n 1 236 GLY n 1 237 MET n 1 238 ASP n 1 239 GLU n 1 240 LEU n 1 241 TYR n 1 242 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Jellyfish _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GFP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aequorea victoria' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6100 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pT7His-CyPet _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CRF 'L-peptide linking' n '[(4Z)-2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(1H-indol-3-ylmethylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl]acetic acid' ? 'C17 H18 N4 O4' 342.349 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 -4 -4 LEU LEU A . n A 1 2 TYR 2 -3 -3 TYR TYR A . n A 1 3 PHE 3 -2 -2 PHE PHE A . n A 1 4 GLN 4 -1 -1 GLN GLN A . n A 1 5 GLY 5 0 0 GLY GLY A . n A 1 6 MET 6 1 1 MET MET A . n A 1 7 VAL 7 2 2 VAL VAL A . n A 1 8 SER 8 3 3 SER SER A . n A 1 9 LYS 9 4 4 LYS LYS A . n A 1 10 GLY 10 5 5 GLY GLY A . n A 1 11 GLU 11 6 6 GLU GLU A . n A 1 12 GLU 12 7 7 GLU GLU A . n A 1 13 LEU 13 8 8 LEU LEU A . n A 1 14 PHE 14 9 9 PHE PHE A . n A 1 15 GLY 15 10 10 GLY GLY A . n A 1 16 GLY 16 11 11 GLY GLY A . n A 1 17 ILE 17 12 12 ILE ILE A . n A 1 18 VAL 18 13 13 VAL VAL A . n A 1 19 PRO 19 14 14 PRO PRO A . n A 1 20 ILE 20 15 15 ILE ILE A . n A 1 21 LEU 21 16 16 LEU LEU A . n A 1 22 VAL 22 17 17 VAL VAL A . n A 1 23 GLU 23 18 18 GLU GLU A . n A 1 24 LEU 24 19 19 LEU LEU A . n A 1 25 GLU 25 20 20 GLU GLU A . n A 1 26 GLY 26 21 21 GLY GLY A . n A 1 27 ASP 27 22 22 ASP ASP A . n A 1 28 VAL 28 23 23 VAL VAL A . n A 1 29 ASN 29 24 24 ASN ASN A . n A 1 30 GLY 30 25 25 GLY GLY A . n A 1 31 HIS 31 26 26 HIS HIS A . n A 1 32 LYS 32 27 27 LYS LYS A . n A 1 33 PHE 33 28 28 PHE PHE A . n A 1 34 SER 34 29 29 SER SER A . n A 1 35 VAL 35 30 30 VAL VAL A . n A 1 36 SER 36 31 31 SER SER A . n A 1 37 GLY 37 32 32 GLY GLY A . n A 1 38 GLU 38 33 33 GLU GLU A . n A 1 39 GLY 39 34 34 GLY GLY A . n A 1 40 GLU 40 35 35 GLU GLU A . n A 1 41 GLY 41 36 36 GLY GLY A . n A 1 42 ASP 42 37 37 ASP ASP A . n A 1 43 ALA 43 38 38 ALA ALA A . n A 1 44 THR 44 39 39 THR THR A . n A 1 45 TYR 45 40 40 TYR TYR A . n A 1 46 GLY 46 41 41 GLY GLY A . n A 1 47 LYS 47 42 42 LYS LYS A . n A 1 48 LEU 48 43 43 LEU LEU A . n A 1 49 THR 49 44 44 THR THR A . n A 1 50 LEU 50 45 45 LEU LEU A . n A 1 51 LYS 51 46 46 LYS LYS A . n A 1 52 PHE 52 47 47 PHE PHE A . n A 1 53 ILE 53 48 48 ILE ILE A . n A 1 54 CYS 54 49 49 CYS CYS A . n A 1 55 THR 55 50 50 THR THR A . n A 1 56 THR 56 51 51 THR THR A . n A 1 57 GLY 57 52 52 GLY GLY A . n A 1 58 LYS 58 53 53 LYS LYS A . n A 1 59 LEU 59 54 54 LEU LEU A . n A 1 60 PRO 60 55 55 PRO PRO A . n A 1 61 VAL 61 56 56 VAL VAL A . n A 1 62 PRO 62 57 57 PRO PRO A . n A 1 63 TRP 63 58 58 TRP TRP A . n A 1 64 PRO 64 59 59 PRO PRO A . n A 1 65 THR 65 60 60 THR THR A . n A 1 66 LEU 66 61 61 LEU LEU A . n A 1 67 VAL 67 62 62 VAL VAL A . n A 1 68 THR 68 63 63 THR THR A . n A 1 69 THR 69 64 64 THR THR A . n A 1 70 LEU 70 65 65 LEU LEU A . n A 1 71 CRF 71 67 67 CRF CRF A . n A 1 72 VAL 72 69 69 VAL VAL A . n A 1 73 GLN 73 70 70 GLN GLN A . n A 1 74 CYS 74 71 71 CYS CYS A . n A 1 75 PHE 75 72 72 PHE PHE A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 ARG 77 74 74 ARG ARG A . n A 1 78 TYR 78 75 75 TYR TYR A . n A 1 79 PRO 79 76 76 PRO PRO A . n A 1 80 ASP 80 77 77 ASP ASP A . n A 1 81 HIS 81 78 78 HIS HIS A . n A 1 82 MET 82 79 79 MET MET A . n A 1 83 LYS 83 80 80 LYS LYS A . n A 1 84 GLN 84 81 81 GLN GLN A . n A 1 85 HIS 85 82 82 HIS HIS A . n A 1 86 ASP 86 83 83 ASP ASP A . n A 1 87 PHE 87 84 84 PHE PHE A . n A 1 88 PHE 88 85 85 PHE PHE A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 SER 90 87 87 SER SER A . n A 1 91 VAL 91 88 88 VAL VAL A . n A 1 92 MET 92 89 89 MET MET A . n A 1 93 PRO 93 90 90 PRO PRO A . n A 1 94 GLU 94 91 91 GLU GLU A . n A 1 95 GLY 95 92 92 GLY GLY A . n A 1 96 TYR 96 93 93 TYR TYR A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 GLN 98 95 95 GLN GLN A . n A 1 99 GLU 99 96 96 GLU GLU A . n A 1 100 ARG 100 97 97 ARG ARG A . n A 1 101 THR 101 98 98 THR THR A . n A 1 102 ILE 102 99 99 ILE ILE A . n A 1 103 PHE 103 100 100 PHE PHE A . n A 1 104 PHE 104 101 101 PHE PHE A . n A 1 105 LYS 105 102 102 LYS LYS A . n A 1 106 ASP 106 103 103 ASP ASP A . n A 1 107 ASP 107 104 104 ASP ASP A . n A 1 108 GLY 108 105 105 GLY GLY A . n A 1 109 ASN 109 106 106 ASN ASN A . n A 1 110 TYR 110 107 107 TYR TYR A . n A 1 111 LYS 111 108 108 LYS LYS A . n A 1 112 THR 112 109 109 THR THR A . n A 1 113 ARG 113 110 110 ARG ARG A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 GLU 115 112 112 GLU GLU A . n A 1 116 VAL 116 113 113 VAL VAL A . n A 1 117 LYS 117 114 114 LYS LYS A . n A 1 118 PHE 118 115 115 PHE PHE A . n A 1 119 GLU 119 116 116 GLU GLU A . n A 1 120 GLY 120 117 117 GLY GLY A . n A 1 121 ASP 121 118 118 ASP ASP A . n A 1 122 THR 122 119 119 THR THR A . n A 1 123 LEU 123 120 120 LEU LEU A . n A 1 124 VAL 124 121 121 VAL VAL A . n A 1 125 ASN 125 122 122 ASN ASN A . n A 1 126 ARG 126 123 123 ARG ARG A . n A 1 127 ILE 127 124 124 ILE ILE A . n A 1 128 GLU 128 125 125 GLU GLU A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 GLY 131 128 128 GLY GLY A . n A 1 132 ILE 132 129 129 ILE ILE A . n A 1 133 ASP 133 130 130 ASP ASP A . n A 1 134 PHE 134 131 131 PHE PHE A . n A 1 135 LYS 135 132 132 LYS LYS A . n A 1 136 GLU 136 133 133 GLU GLU A . n A 1 137 ASP 137 134 134 ASP ASP A . n A 1 138 GLY 138 135 135 GLY GLY A . n A 1 139 ASN 139 136 136 ASN ASN A . n A 1 140 ILE 140 137 137 ILE ILE A . n A 1 141 LEU 141 138 138 LEU LEU A . n A 1 142 GLY 142 139 139 GLY GLY A . n A 1 143 HIS 143 140 140 HIS HIS A . n A 1 144 LYS 144 141 141 LYS LYS A . n A 1 145 LEU 145 142 142 LEU LEU A . n A 1 146 GLU 146 143 143 GLU GLU A . n A 1 147 TYR 147 144 144 TYR TYR A . n A 1 148 ASN 148 145 145 ASN ASN A . n A 1 149 TYR 149 146 146 TYR TYR A . n A 1 150 ILE 150 147 147 ILE ILE A . n A 1 151 SER 151 148 148 SER SER A . n A 1 152 HIS 152 149 149 HIS HIS A . n A 1 153 ASN 153 150 150 ASN ASN A . n A 1 154 VAL 154 151 151 VAL VAL A . n A 1 155 TYR 155 152 152 TYR TYR A . n A 1 156 ILE 156 153 153 ILE ILE A . n A 1 157 THR 157 154 154 THR THR A . n A 1 158 ALA 158 155 155 ALA ALA A . n A 1 159 ASP 159 156 156 ASP ASP A . n A 1 160 LYS 160 157 157 LYS LYS A . n A 1 161 GLN 161 158 158 GLN GLN A . n A 1 162 LYS 162 159 159 LYS LYS A . n A 1 163 ASN 163 160 160 ASN ASN A . n A 1 164 GLY 164 161 161 GLY GLY A . n A 1 165 ILE 165 162 162 ILE ILE A . n A 1 166 LYS 166 163 163 LYS LYS A . n A 1 167 ALA 167 164 164 ALA ALA A . n A 1 168 ASN 168 165 165 ASN ASN A . n A 1 169 PHE 169 166 166 PHE PHE A . n A 1 170 LYS 170 167 167 LYS LYS A . n A 1 171 ALA 171 168 168 ALA ALA A . n A 1 172 ARG 172 169 169 ARG ARG A . n A 1 173 HIS 173 170 170 HIS HIS A . n A 1 174 ASN 174 171 171 ASN ASN A . n A 1 175 ILE 175 172 172 ILE ILE A . n A 1 176 THR 176 173 173 THR THR A . n A 1 177 ASP 177 174 174 ASP ASP A . n A 1 178 GLY 178 175 175 GLY GLY A . n A 1 179 SER 179 176 176 SER SER A . n A 1 180 VAL 180 177 177 VAL VAL A . n A 1 181 GLN 181 178 178 GLN GLN A . n A 1 182 LEU 182 179 179 LEU LEU A . n A 1 183 ALA 183 180 180 ALA ALA A . n A 1 184 ASP 184 181 181 ASP ASP A . n A 1 185 HIS 185 182 182 HIS HIS A . n A 1 186 TYR 186 183 183 TYR TYR A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 GLN 188 185 185 GLN GLN A . n A 1 189 ASN 189 186 186 ASN ASN A . n A 1 190 THR 190 187 187 THR THR A . n A 1 191 PRO 191 188 188 PRO PRO A . n A 1 192 ILE 192 189 189 ILE ILE A . n A 1 193 GLY 193 190 190 GLY GLY A . n A 1 194 ASP 194 191 191 ASP ASP A . n A 1 195 GLY 195 192 192 GLY GLY A . n A 1 196 PRO 196 193 193 PRO PRO A . n A 1 197 VAL 197 194 194 VAL VAL A . n A 1 198 ILE 198 195 195 ILE ILE A . n A 1 199 LEU 199 196 196 LEU LEU A . n A 1 200 PRO 200 197 197 PRO PRO A . n A 1 201 ASP 201 198 198 ASP ASP A . n A 1 202 ASN 202 199 199 ASN ASN A . n A 1 203 HIS 203 200 200 HIS HIS A . n A 1 204 TYR 204 201 201 TYR TYR A . n A 1 205 LEU 205 202 202 LEU LEU A . n A 1 206 SER 206 203 203 SER SER A . n A 1 207 THR 207 204 204 THR THR A . n A 1 208 GLN 208 205 205 GLN GLN A . n A 1 209 SER 209 206 206 SER SER A . n A 1 210 ALA 210 207 207 ALA ALA A . n A 1 211 LEU 211 208 208 LEU LEU A . n A 1 212 SER 212 209 209 SER SER A . n A 1 213 LYS 213 210 210 LYS LYS A . n A 1 214 ASP 214 211 211 ASP ASP A . n A 1 215 PRO 215 212 212 PRO PRO A . n A 1 216 ASN 216 213 213 ASN ASN A . n A 1 217 GLU 217 214 214 GLU GLU A . n A 1 218 LYS 218 215 215 LYS LYS A . n A 1 219 ARG 219 216 216 ARG ARG A . n A 1 220 ASP 220 217 217 ASP ASP A . n A 1 221 HIS 221 218 218 HIS HIS A . n A 1 222 MET 222 219 219 MET MET A . n A 1 223 VAL 223 220 220 VAL VAL A . n A 1 224 LEU 224 221 221 LEU LEU A . n A 1 225 LEU 225 222 222 LEU LEU A . n A 1 226 GLU 226 223 223 GLU GLU A . n A 1 227 PHE 227 224 224 PHE PHE A . n A 1 228 VAL 228 225 225 VAL VAL A . n A 1 229 THR 229 226 226 THR THR A . n A 1 230 ALA 230 227 227 ALA ALA A . n A 1 231 ALA 231 228 228 ALA ALA A . n A 1 232 GLY 232 229 229 GLY GLY A . n A 1 233 ILE 233 230 230 ILE ILE A . n A 1 234 THR 234 231 231 THR THR A . n A 1 235 HIS 235 232 ? ? ? A . n A 1 236 GLY 236 233 ? ? ? A . n A 1 237 MET 237 234 ? ? ? A . n A 1 238 ASP 238 235 ? ? ? A . n A 1 239 GLU 239 236 ? ? ? A . n A 1 240 LEU 240 237 ? ? ? A . n A 1 241 TYR 241 238 ? ? ? A . n A 1 242 LYS 242 239 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 241 241 HOH HOH A . B 2 HOH 2 242 242 HOH HOH A . B 2 HOH 3 243 243 HOH HOH A . B 2 HOH 4 244 244 HOH HOH A . B 2 HOH 5 245 245 HOH HOH A . B 2 HOH 6 246 246 HOH HOH A . B 2 HOH 7 247 247 HOH HOH A . B 2 HOH 8 248 248 HOH HOH A . B 2 HOH 9 249 249 HOH HOH A . B 2 HOH 10 250 250 HOH HOH A . B 2 HOH 11 251 251 HOH HOH A . B 2 HOH 12 252 252 HOH HOH A . B 2 HOH 13 253 253 HOH HOH A . B 2 HOH 14 254 254 HOH HOH A . B 2 HOH 15 255 255 HOH HOH A . B 2 HOH 16 256 256 HOH HOH A . B 2 HOH 17 257 257 HOH HOH A . B 2 HOH 18 258 258 HOH HOH A . B 2 HOH 19 259 259 HOH HOH A . B 2 HOH 20 260 260 HOH HOH A . B 2 HOH 21 261 261 HOH HOH A . B 2 HOH 22 262 262 HOH HOH A . B 2 HOH 23 263 263 HOH HOH A . B 2 HOH 24 264 264 HOH HOH A . B 2 HOH 25 265 265 HOH HOH A . B 2 HOH 26 266 266 HOH HOH A . B 2 HOH 27 267 267 HOH HOH A . B 2 HOH 28 268 268 HOH HOH A . B 2 HOH 29 269 269 HOH HOH A . B 2 HOH 30 270 270 HOH HOH A . B 2 HOH 31 271 271 HOH HOH A . B 2 HOH 32 272 272 HOH HOH A . B 2 HOH 33 273 273 HOH HOH A . B 2 HOH 34 274 274 HOH HOH A . B 2 HOH 35 275 275 HOH HOH A . B 2 HOH 36 276 276 HOH HOH A . B 2 HOH 37 277 277 HOH HOH A . B 2 HOH 38 278 278 HOH HOH A . B 2 HOH 39 279 279 HOH HOH A . B 2 HOH 40 280 280 HOH HOH A . B 2 HOH 41 281 281 HOH HOH A . B 2 HOH 42 282 282 HOH HOH A . B 2 HOH 43 283 283 HOH HOH A . B 2 HOH 44 284 284 HOH HOH A . B 2 HOH 45 285 285 HOH HOH A . B 2 HOH 46 286 286 HOH HOH A . B 2 HOH 47 287 287 HOH HOH A . B 2 HOH 48 288 288 HOH HOH A . B 2 HOH 49 289 289 HOH HOH A . B 2 HOH 50 290 290 HOH HOH A . B 2 HOH 51 291 291 HOH HOH A . B 2 HOH 52 292 292 HOH HOH A . B 2 HOH 53 293 293 HOH HOH A . B 2 HOH 54 294 294 HOH HOH A . B 2 HOH 55 295 295 HOH HOH A . B 2 HOH 56 296 296 HOH HOH A . B 2 HOH 57 297 297 HOH HOH A . B 2 HOH 58 298 298 HOH HOH A . B 2 HOH 59 299 299 HOH HOH A . B 2 HOH 60 300 300 HOH HOH A . B 2 HOH 61 301 301 HOH HOH A . B 2 HOH 62 302 302 HOH HOH A . B 2 HOH 63 303 303 HOH HOH A . B 2 HOH 64 304 304 HOH HOH A . B 2 HOH 65 305 305 HOH HOH A . B 2 HOH 66 306 306 HOH HOH A . B 2 HOH 67 307 307 HOH HOH A . B 2 HOH 68 308 308 HOH HOH A . B 2 HOH 69 309 309 HOH HOH A . B 2 HOH 70 310 310 HOH HOH A . B 2 HOH 71 311 311 HOH HOH A . B 2 HOH 72 312 312 HOH HOH A . B 2 HOH 73 313 313 HOH HOH A . B 2 HOH 74 314 314 HOH HOH A . B 2 HOH 75 315 315 HOH HOH A . B 2 HOH 76 316 316 HOH HOH A . B 2 HOH 77 317 317 HOH HOH A . B 2 HOH 78 318 318 HOH HOH A . B 2 HOH 79 319 319 HOH HOH A . B 2 HOH 80 320 320 HOH HOH A . B 2 HOH 81 321 321 HOH HOH A . B 2 HOH 82 322 322 HOH HOH A . B 2 HOH 83 323 323 HOH HOH A . B 2 HOH 84 324 324 HOH HOH A . B 2 HOH 85 325 325 HOH HOH A . B 2 HOH 86 326 326 HOH HOH A . B 2 HOH 87 327 327 HOH HOH A . B 2 HOH 88 328 328 HOH HOH A . B 2 HOH 89 329 329 HOH HOH A . B 2 HOH 90 330 330 HOH HOH A . B 2 HOH 91 331 331 HOH HOH A . B 2 HOH 92 332 332 HOH HOH A . B 2 HOH 93 333 333 HOH HOH A . B 2 HOH 94 334 334 HOH HOH A . B 2 HOH 95 335 335 HOH HOH A . B 2 HOH 96 336 336 HOH HOH A . B 2 HOH 97 337 337 HOH HOH A . B 2 HOH 98 338 338 HOH HOH A . B 2 HOH 99 339 339 HOH HOH A . B 2 HOH 100 340 340 HOH HOH A . B 2 HOH 101 341 341 HOH HOH A . B 2 HOH 102 342 342 HOH HOH A . B 2 HOH 103 343 343 HOH HOH A . B 2 HOH 104 344 344 HOH HOH A . B 2 HOH 105 345 345 HOH HOH A . B 2 HOH 106 346 346 HOH HOH A . B 2 HOH 107 347 347 HOH HOH A . B 2 HOH 108 348 348 HOH HOH A . B 2 HOH 109 349 349 HOH HOH A . B 2 HOH 110 350 350 HOH HOH A . B 2 HOH 111 351 351 HOH HOH A . B 2 HOH 112 352 352 HOH HOH A . B 2 HOH 113 353 353 HOH HOH A . B 2 HOH 114 354 354 HOH HOH A . B 2 HOH 115 355 355 HOH HOH A . B 2 HOH 116 356 356 HOH HOH A . B 2 HOH 117 357 357 HOH HOH A . B 2 HOH 118 358 358 HOH HOH A . B 2 HOH 119 359 359 HOH HOH A . B 2 HOH 120 360 360 HOH HOH A . B 2 HOH 121 361 361 HOH HOH A . B 2 HOH 122 362 362 HOH HOH A . B 2 HOH 123 363 363 HOH HOH A . B 2 HOH 124 364 364 HOH HOH A . B 2 HOH 125 365 365 HOH HOH A . B 2 HOH 126 366 366 HOH HOH A . B 2 HOH 127 368 368 HOH HOH A . B 2 HOH 128 369 369 HOH HOH A . B 2 HOH 129 370 370 HOH HOH A . B 2 HOH 130 371 371 HOH HOH A . B 2 HOH 131 372 372 HOH HOH A . B 2 HOH 132 373 373 HOH HOH A . B 2 HOH 133 374 374 HOH HOH A . B 2 HOH 134 375 375 HOH HOH A . B 2 HOH 135 376 376 HOH HOH A . B 2 HOH 136 377 377 HOH HOH A . B 2 HOH 137 378 378 HOH HOH A . B 2 HOH 138 379 379 HOH HOH A . B 2 HOH 139 380 380 HOH HOH A . B 2 HOH 140 381 381 HOH HOH A . B 2 HOH 141 382 382 HOH HOH A . B 2 HOH 142 383 383 HOH HOH A . B 2 HOH 143 384 384 HOH HOH A . B 2 HOH 144 385 385 HOH HOH A . B 2 HOH 145 386 386 HOH HOH A . B 2 HOH 146 387 387 HOH HOH A . B 2 HOH 147 388 388 HOH HOH A . B 2 HOH 148 389 389 HOH HOH A . B 2 HOH 149 390 390 HOH HOH A . B 2 HOH 150 391 391 HOH HOH A . B 2 HOH 151 392 392 HOH HOH A . B 2 HOH 152 393 393 HOH HOH A . B 2 HOH 153 394 394 HOH HOH A . B 2 HOH 154 395 395 HOH HOH A . B 2 HOH 155 396 396 HOH HOH A . B 2 HOH 156 397 397 HOH HOH A . B 2 HOH 157 398 398 HOH HOH A . B 2 HOH 158 399 399 HOH HOH A . B 2 HOH 159 400 400 HOH HOH A . B 2 HOH 160 401 401 HOH HOH A . B 2 HOH 161 402 402 HOH HOH A . B 2 HOH 162 403 403 HOH HOH A . B 2 HOH 163 404 404 HOH HOH A . B 2 HOH 164 405 405 HOH HOH A . B 2 HOH 165 406 406 HOH HOH A . B 2 HOH 166 407 407 HOH HOH A . B 2 HOH 167 408 408 HOH HOH A . B 2 HOH 168 409 409 HOH HOH A . B 2 HOH 169 410 410 HOH HOH A . B 2 HOH 170 411 411 HOH HOH A . B 2 HOH 171 412 412 HOH HOH A . B 2 HOH 172 413 413 HOH HOH A . B 2 HOH 173 414 414 HOH HOH A . B 2 HOH 174 415 415 HOH HOH A . B 2 HOH 175 416 416 HOH HOH A . B 2 HOH 176 417 417 HOH HOH A . B 2 HOH 177 418 418 HOH HOH A . B 2 HOH 178 419 419 HOH HOH A . B 2 HOH 179 420 420 HOH HOH A . B 2 HOH 180 421 421 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3GEX _cell.length_a 50.907 _cell.length_b 63.011 _cell.length_c 71.424 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GEX _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3GEX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30% PEG 4000, 0.1M Tris-HCl pH 8.5, 0.2M Lithium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2008-12-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3GEX _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.6 _reflns.number_obs 28302 _reflns.number_all 31080 _reflns.percent_possible_obs 91.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.039 _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 59.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.230 _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_redundancy 1.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1825 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GEX _refine.ls_number_reflns_obs 25452 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.41 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 91.16 _refine.ls_R_factor_obs 0.19683 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19324 _refine.ls_R_factor_R_free 0.22881 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 2848 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 20.199 _refine.aniso_B[1][1] -0.98 _refine.aniso_B[2][2] -1.16 _refine.aniso_B[3][3] 2.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1QYO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.115 _refine.pdbx_overall_ESU_R_Free 0.112 _refine.overall_SU_ML 0.064 _refine.overall_SU_B 1.771 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1907 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 180 _refine_hist.number_atoms_total 2087 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 20.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1954 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.309 1.966 ? 2646 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.222 5.000 ? 237 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.131 25.158 ? 95 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.043 15.000 ? 331 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.100 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.089 0.200 ? 283 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1500 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.253 0.300 ? 858 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.317 0.500 ? 1299 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.183 0.500 ? 303 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.214 0.300 ? 56 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.145 0.500 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.939 2.000 ? 1197 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.502 3.000 ? 1898 'X-RAY DIFFRACTION' ? r_scbond_it 1.013 2.000 ? 845 'X-RAY DIFFRACTION' ? r_scangle_it 1.550 3.000 ? 748 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 1148 _refine_ls_shell.R_factor_R_work 0.385 _refine_ls_shell.percent_reflns_obs 56.22 _refine_ls_shell.R_factor_R_free 0.483 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 127 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1155 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3GEX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3GEX _struct.title '1.6 angstrom crystal structure of fluorescent protein Cypet' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GEX _struct_keywords.pdbx_keywords 'FLUORESCENT PROTEIN' _struct_keywords.text 'BETA BARREL, CHROMOPHORE, Luminescence, Photoprotein, FLUORESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GFP_AEQVI _struct_ref.pdbx_db_accession P42212 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQ HDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNG IKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GEX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 242 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42212 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GEX LEU A 1 ? UNP P42212 ? ? 'expression tag' -4 1 1 3GEX TYR A 2 ? UNP P42212 ? ? 'expression tag' -3 2 1 3GEX PHE A 3 ? UNP P42212 ? ? 'expression tag' -2 3 1 3GEX GLN A 4 ? UNP P42212 ? ? 'expression tag' -1 4 1 3GEX GLY A 5 ? UNP P42212 ? ? 'expression tag' 0 5 1 3GEX MET A 6 ? UNP P42212 ? ? 'expression tag' 1 6 1 3GEX VAL A 7 ? UNP P42212 MET 1 'SEE REMARK 999' 2 7 1 3GEX GLY A 15 ? UNP P42212 THR 9 'engineered mutation' 10 8 1 3GEX ILE A 17 ? UNP P42212 VAL 11 'engineered mutation' 12 9 1 3GEX GLU A 25 ? UNP P42212 ASP 19 'engineered mutation' 20 10 1 3GEX LEU A 70 ? UNP P42212 PHE 64 'SEE REMARK 999' 65 11 1 3GEX CRF A 71 ? UNP P42212 SER 65 chromophore 67 12 1 3GEX CRF A 71 ? UNP P42212 TYR 66 chromophore 67 13 1 3GEX CRF A 71 ? UNP P42212 GLY 67 chromophore 67 14 1 3GEX VAL A 91 ? UNP P42212 ALA 87 'engineered mutation' 88 15 1 3GEX ILE A 150 ? UNP P42212 ASN 146 'SEE REMARK 999' 147 16 1 3GEX THR A 157 ? UNP P42212 MET 153 'SEE REMARK 999' 154 17 1 3GEX ALA A 167 ? UNP P42212 VAL 163 'SEE REMARK 999' 164 18 1 3GEX ALA A 171 ? UNP P42212 ILE 167 'engineered mutation' 168 19 1 3GEX THR A 176 ? UNP P42212 GLU 172 'engineered mutation' 173 20 1 3GEX ILE A 198 ? UNP P42212 LEU 194 'engineered mutation' 195 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'AUTHOR STATES THAT THE BIOLOGICAL UNIT IS UNKNOWN.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 8 ? LEU A 13 ? SER A 3 LEU A 8 1 ? 6 HELX_P HELX_P2 2 PRO A 62 ? VAL A 67 ? PRO A 57 VAL A 62 5 ? 6 HELX_P HELX_P3 3 VAL A 72 ? SER A 76 ? VAL A 69 SER A 73 5 ? 5 HELX_P HELX_P4 4 PRO A 79 ? HIS A 85 ? PRO A 76 HIS A 82 5 ? 7 HELX_P HELX_P5 5 ASP A 86 ? VAL A 91 ? ASP A 83 VAL A 88 1 ? 6 HELX_P HELX_P6 6 LYS A 160 ? ASN A 163 ? LYS A 157 ASN A 160 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 70 C ? ? ? 1_555 A CRF 71 N1 ? ? A LEU 65 A CRF 67 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale2 covale both ? A CRF 71 C3 ? ? ? 1_555 A VAL 72 N ? ? A CRF 67 A VAL 69 1_555 ? ? ? ? ? ? ? 1.475 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CRF _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 71 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id CRF _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 67 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id 'THR, TRP, GLY' _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id CRF _pdbx_modification_feature.type None _pdbx_modification_feature.category Chromophore/chromophore-like # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 MET 92 A . ? MET 89 A PRO 93 A ? PRO 90 A 1 6.00 2 GLU 136 A . ? GLU 133 A ASP 137 A ? ASP 134 A 1 4.20 3 GLU 136 A . ? GLU 133 A ASP 137 A ? ASP 134 A 1 7.35 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 17 ? VAL A 28 ? ILE A 12 VAL A 23 A 2 HIS A 31 ? ASP A 42 ? HIS A 26 ASP A 37 A 3 LYS A 47 ? CYS A 54 ? LYS A 42 CYS A 49 A 4 HIS A 221 ? ALA A 231 ? HIS A 218 ALA A 228 A 5 HIS A 203 ? SER A 212 ? HIS A 200 SER A 209 A 6 ILE A 150 ? ASP A 159 ? ILE A 147 ASP A 156 A 7 GLY A 164 ? ASN A 174 ? GLY A 161 ASN A 171 A 8 VAL A 180 ? PRO A 191 ? VAL A 177 PRO A 188 A 9 TYR A 96 ? PHE A 104 ? TYR A 93 PHE A 101 A 10 ASN A 109 ? GLU A 119 ? ASN A 106 GLU A 116 A 11 THR A 122 ? ILE A 132 ? THR A 119 ILE A 129 A 12 ILE A 17 ? VAL A 28 ? ILE A 12 VAL A 23 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 26 ? N GLY A 21 O PHE A 33 ? O PHE A 28 A 2 3 N SER A 36 ? N SER A 31 O ILE A 53 ? O ILE A 48 A 3 4 N LEU A 50 ? N LEU A 45 O LEU A 224 ? O LEU A 221 A 4 5 O LEU A 225 ? O LEU A 222 N ALA A 210 ? N ALA A 207 A 5 6 O SER A 209 ? O SER A 206 N ILE A 150 ? N ILE A 147 A 6 7 N ASP A 159 ? N ASP A 156 O GLY A 164 ? O GLY A 161 A 7 8 N HIS A 173 ? N HIS A 170 O GLN A 181 ? O GLN A 178 A 8 9 O THR A 190 ? O THR A 187 N VAL A 97 ? N VAL A 94 A 9 10 N ILE A 102 ? N ILE A 99 O TYR A 110 ? O TYR A 107 A 10 11 N GLU A 119 ? N GLU A 116 O THR A 122 ? O THR A 119 A 11 12 O ILE A 127 ? O ILE A 124 N GLU A 23 ? N GLU A 18 # _pdbx_entry_details.entry_id 3GEX _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE WAS MUTATED FROM SER & TYR TO THR & TRP, RESPECTIVELY, TO FORM CHROMOPHORE. THESE FIVE RESIDUES ARE THE NEUTRAL MUTATIONS THAT COME FROM THE ORIGINAL PLASMID. ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 312 ? ? O A HOH 379 ? ? 2.07 2 1 OD1 A ASP 37 ? ? O A HOH 325 ? ? 2.07 3 1 OE1 A GLU 133 ? B O A HOH 403 ? ? 2.13 4 1 O A ASN 145 ? A O A HOH 304 ? ? 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 133 ? A -20.57 -73.53 2 1 ASP A 134 ? A 124.03 -65.65 3 1 ASP A 134 ? B 119.12 -40.42 4 1 ASN A 145 ? B -149.86 -75.56 5 1 TYR A 146 ? A -43.11 158.12 6 1 SER A 176 ? ? -78.51 -168.50 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CRF 71 A CRF 67 ? THR ? 2 A CRF 71 A CRF 67 ? TRP ? 3 A CRF 71 A CRF 67 ? GLY ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 232 ? A HIS 235 2 1 Y 1 A GLY 233 ? A GLY 236 3 1 Y 1 A MET 234 ? A MET 237 4 1 Y 1 A ASP 235 ? A ASP 238 5 1 Y 1 A GLU 236 ? A GLU 239 6 1 Y 1 A LEU 237 ? A LEU 240 7 1 Y 1 A TYR 238 ? A TYR 241 8 1 Y 1 A LYS 239 ? A LYS 242 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CRF N1 N N N 74 CRF CA1 C N R 75 CRF CB1 C N R 76 CRF CG1 C N N 77 CRF OG1 O N N 78 CRF C1 C N N 79 CRF N2 N N N 80 CRF N3 N N N 81 CRF C2 C N N 82 CRF O2 O N N 83 CRF CA2 C N N 84 CRF CA3 C N N 85 CRF C3 C N N 86 CRF O3 O N N 87 CRF CB2 C N N 88 CRF CG2 C Y N 89 CRF CD1 C Y N 90 CRF CD2 C Y N 91 CRF CE2 C Y N 92 CRF NE1 N Y N 93 CRF CE3 C Y N 94 CRF CZ2 C Y N 95 CRF CZ3 C Y N 96 CRF CH2 C Y N 97 CRF H H N N 98 CRF H2 H N N 99 CRF HA1 H N N 100 CRF HB1 H N N 101 CRF HG11 H N N 102 CRF HG12 H N N 103 CRF HG13 H N N 104 CRF HOG H N N 105 CRF HA31 H N N 106 CRF HA32 H N N 107 CRF OXT O N N 108 CRF HB2 H N N 109 CRF HD1 H N N 110 CRF HE1 H N N 111 CRF HE3 H N N 112 CRF HZ2 H N N 113 CRF HZ3 H N N 114 CRF HH2 H N N 115 CRF HXT H N N 116 CYS N N N N 117 CYS CA C N R 118 CYS C C N N 119 CYS O O N N 120 CYS CB C N N 121 CYS SG S N N 122 CYS OXT O N N 123 CYS H H N N 124 CYS H2 H N N 125 CYS HA H N N 126 CYS HB2 H N N 127 CYS HB3 H N N 128 CYS HG H N N 129 CYS HXT H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CRF N1 CA1 sing N N 70 CRF N1 H sing N N 71 CRF N1 H2 sing N N 72 CRF CA1 CB1 sing N N 73 CRF CA1 C1 sing N N 74 CRF CA1 HA1 sing N N 75 CRF CB1 CG1 sing N N 76 CRF CB1 OG1 sing N N 77 CRF CB1 HB1 sing N N 78 CRF CG1 HG11 sing N N 79 CRF CG1 HG12 sing N N 80 CRF CG1 HG13 sing N N 81 CRF OG1 HOG sing N N 82 CRF C1 N2 doub N N 83 CRF C1 N3 sing N N 84 CRF N2 CA2 sing N N 85 CRF N3 C2 sing N N 86 CRF N3 CA3 sing N N 87 CRF C2 O2 doub N N 88 CRF C2 CA2 sing N N 89 CRF CA2 CB2 doub N Z 90 CRF CA3 C3 sing N N 91 CRF CA3 HA31 sing N N 92 CRF CA3 HA32 sing N N 93 CRF C3 O3 doub N N 94 CRF C3 OXT sing N N 95 CRF CB2 CG2 sing N N 96 CRF CB2 HB2 sing N N 97 CRF CG2 CD1 doub Y N 98 CRF CG2 CD2 sing Y N 99 CRF CD1 NE1 sing Y N 100 CRF CD1 HD1 sing N N 101 CRF CD2 CE2 doub Y N 102 CRF CD2 CE3 sing Y N 103 CRF CE2 NE1 sing Y N 104 CRF CE2 CZ2 sing Y N 105 CRF NE1 HE1 sing N N 106 CRF CE3 CZ3 doub Y N 107 CRF CE3 HE3 sing N N 108 CRF CZ2 CH2 doub Y N 109 CRF CZ2 HZ2 sing N N 110 CRF CZ3 CH2 sing Y N 111 CRF CZ3 HZ3 sing N N 112 CRF CH2 HH2 sing N N 113 CRF OXT HXT sing N N 114 CYS N CA sing N N 115 CYS N H sing N N 116 CYS N H2 sing N N 117 CYS CA C sing N N 118 CYS CA CB sing N N 119 CYS CA HA sing N N 120 CYS C O doub N N 121 CYS C OXT sing N N 122 CYS CB SG sing N N 123 CYS CB HB2 sing N N 124 CYS CB HB3 sing N N 125 CYS SG HG sing N N 126 CYS OXT HXT sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1QYO _pdbx_initial_refinement_model.details 'PDB ENTRY 1QYO' # _atom_sites.entry_id 3GEX _atom_sites.fract_transf_matrix[1][1] 0.019644 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015870 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014001 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_