HEADER HYDROLASE 03-MAR-09 3GH7 TITLE CRYSTAL STRUCTURE OF BETA-HEXOSAMINIDASE FROM PAENIBACILLUS SP. TS12 TITLE 2 IN COMPLEX WITH GALNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-HEXOSAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEX1; COMPND 5 EC: 3.2.1.52; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PAENIBACILLUS SP.; SOURCE 3 ORGANISM_TAXID: 58172; SOURCE 4 STRAIN: TS12; SOURCE 5 GENE: HEX1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28C KEYWDS BETA-N-ACETYLHEXOSAMINIDASE, GLYCOSPHINGOLIPIDS, PAENIBACILLUS SP., KEYWDS 2 GH20, HYDROLASE, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 3 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR T.SUMIDA,R.ISHII,T.YANAGISAWA,S.YOKOYAMA,M.ITO,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 01-NOV-23 3GH7 1 HETSYN REVDAT 3 29-JUL-20 3GH7 1 COMPND REMARK HETNAM SITE REVDAT 2 12-FEB-14 3GH7 1 JRNL VERSN REVDAT 1 07-JUL-09 3GH7 0 JRNL AUTH T.SUMIDA,R.ISHII,T.YANAGISAWA,S.YOKOYAMA,M.ITO JRNL TITL MOLECULAR CLONING AND CRYSTAL STRUCTURAL ANALYSIS OF A NOVEL JRNL TITL 2 BETA-N-ACETYLHEXOSAMINIDASE FROM PAENIBACILLUS SP. TS12 JRNL TITL 3 CAPABLE OF DEGRADING GLYCOSPHINGOLIPIDS JRNL REF J.MOL.BIOL. V. 392 87 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19524595 JRNL DOI 10.1016/J.JMB.2009.06.025 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 39027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2071 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2697 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.1530 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.2280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3922 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 562 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.484 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4037 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5494 ; 1.313 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 504 ; 5.756 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 181 ;35.196 ;24.586 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 638 ;12.720 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;15.441 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 603 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3095 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2086 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2781 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 508 ; 0.144 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 62 ; 0.188 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 46 ; 0.171 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2565 ; 0.797 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4044 ; 1.229 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1693 ; 1.919 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1450 ; 2.944 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4258 ; 1.191 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 562 ; 4.056 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3942 ; 1.785 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GH7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41113 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB 1HP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA-ACETATE, PEG2000, PH 4.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.03700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.03700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 47.83350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.06150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 47.83350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.06150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.03700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 47.83350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.06150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.03700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 47.83350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.06150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 SER A -20 REMARK 465 SER A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 SER A 3 REMARK 465 PHE A 4 REMARK 465 ILE A 5 REMARK 465 PRO A 6 REMARK 465 GLU A 7 REMARK 465 SER A 8 REMARK 465 ALA A 9 REMARK 465 SER A 10 REMARK 465 ALA A 11 REMARK 465 SER A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 14 139.31 -176.65 REMARK 500 GLN A 79 64.90 -118.89 REMARK 500 GLN A 409 18.41 -149.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GH4 RELATED DB: PDB REMARK 900 RELATED ID: 3GH5 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN REMARK 999 DOES NOT CURRENTLY EXIST. REMARK 999 THE AUTHOR HAS SUBMITTED TO DDBJ, ACCESSION NUMBER AB490155. REMARK 999 THE RESIDUES (-22)- 0 ARE EXPRESSION TAGS. DBREF 3GH7 A -22 502 PDB 3GH7 3GH7 -22 502 SEQRES 1 A 525 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 525 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET MET SER SEQRES 3 A 525 PHE ILE PRO GLU SER ALA SER ALA SER THR SER GLN PRO SEQRES 4 A 525 SER ILE LEU PRO LYS PRO VAL SER TYR THR VAL GLY SER SEQRES 5 A 525 GLY GLN PHE VAL LEU THR LYS ASN ALA SER ILE PHE VAL SEQRES 6 A 525 ALA GLY ASN ASN VAL GLY GLU THR ASP GLU LEU PHE ASN SEQRES 7 A 525 ILE GLY GLN ALA LEU ALA LYS LYS LEU ASN ALA SER THR SEQRES 8 A 525 GLY TYR THR ILE SER VAL VAL LYS SER ASN GLN PRO THR SEQRES 9 A 525 ALA GLY SER ILE TYR LEU THR THR VAL GLY GLY ASN ALA SEQRES 10 A 525 ALA LEU GLY ASN GLU GLY TYR ASP LEU ILE THR THR SER SEQRES 11 A 525 ASN GLN VAL THR LEU THR ALA ASN LYS PRO GLU GLY VAL SEQRES 12 A 525 PHE ARG GLY ASN GLN THR LEU LEU GLN LEU LEU PRO ALA SEQRES 13 A 525 GLY ILE GLU LYS ASN THR VAL VAL SER GLY VAL GLN TRP SEQRES 14 A 525 VAL ILE PRO HIS SER ASN ILE SER ASP LYS PRO GLU TYR SEQRES 15 A 525 GLU TYR ARG GLY LEU MET LEU ASP VAL ALA ARG HIS PHE SEQRES 16 A 525 PHE THR VAL ASP GLU VAL LYS ARG GLN ILE ASP LEU ALA SEQRES 17 A 525 SER GLN TYR LYS ILE ASN LYS PHE HIS MET HIS LEU SER SEQRES 18 A 525 ASP ASP GLN GLY TRP ARG ILE GLU ILE LYS SER TRP PRO SEQRES 19 A 525 ASP LEU ILE GLU ILE GLY SER LYS GLY GLN VAL GLY GLY SEQRES 20 A 525 GLY PRO GLY GLY TYR TYR THR GLN GLU GLN PHE LYS ASP SEQRES 21 A 525 ILE VAL SER TYR ALA ALA GLU ARG TYR ILE GLU VAL ILE SEQRES 22 A 525 PRO GLU ILE ASP MET PRO GLY HIS THR ASN ALA ALA LEU SEQRES 23 A 525 ALA SER TYR GLY GLU LEU ASN PRO ASP GLY LYS ARG LYS SEQRES 24 A 525 ALA MET ARG THR ASP THR ALA VAL GLY TYR SER THR LEU SEQRES 25 A 525 MET PRO ARG ALA GLU ILE THR TYR GLN PHE VAL GLU ASP SEQRES 26 A 525 VAL ILE SER GLU LEU ALA ALA ILE SER PRO SER PRO TYR SEQRES 27 A 525 ILE HIS LEU GLY GLY ASP GLU SER ASN ALA THR SER ALA SEQRES 28 A 525 ALA ASP TYR ASP TYR PHE PHE GLY ARG VAL THR ALA ILE SEQRES 29 A 525 ALA ASN SER TYR GLY LYS LYS VAL VAL GLY TRP ASP PRO SEQRES 30 A 525 SER ASP THR SER SER GLY ALA THR SER ASP SER VAL LEU SEQRES 31 A 525 GLN ASN TRP THR CYS SER ALA SER THR GLY THR ALA ALA SEQRES 32 A 525 LYS ALA LYS GLY MET LYS VAL ILE VAL SER PRO ALA ASN SEQRES 33 A 525 ALA TYR LEU ASP MET LYS TYR TYR SER ASP SER PRO ILE SEQRES 34 A 525 GLY LEU GLN TRP ARG GLY PHE VAL ASN THR ASN ARG ALA SEQRES 35 A 525 TYR ASN TRP ASP PRO THR ASP CYS ILE LYS GLY ALA ASN SEQRES 36 A 525 ILE TYR GLY VAL GLU SER THR LEU TRP THR GLU THR PHE SEQRES 37 A 525 VAL THR GLN ASP HIS LEU ASP TYR MET LEU TYR PRO LYS SEQRES 38 A 525 LEU LEU SER ASN ALA GLU VAL GLY TRP THR ALA ARG GLY SEQRES 39 A 525 ASP ARG ASN TRP ASP ASP PHE LYS GLU ARG LEU ILE GLU SEQRES 40 A 525 HIS THR PRO ARG LEU GLN ASN LYS GLY ILE LYS PHE PHE SEQRES 41 A 525 ALA ASP PRO ILE VAL HET SO4 A1200 5 HET NGA A1300 15 HETNAM SO4 SULFATE ION HETNAM NGA 2-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE HETSYN NGA N-ACETYL-BETA-D-GALACTOSAMINE; 2-ACETAMIDO-2-DEOXY- HETSYN 2 NGA BETA-D-GALACTOSE; 2-ACETAMIDO-2-DEOXY-D-GALACTOSE; 2- HETSYN 3 NGA ACETAMIDO-2-DEOXY-GALACTOSE; N-ACETYL-D-GALACTOSAMINE FORMUL 2 SO4 O4 S 2- FORMUL 3 NGA C8 H15 N O6 FORMUL 4 HOH *562(H2 O) HELIX 1 1 ASN A 46 GLY A 69 1 24 HELIX 2 2 ASN A 93 GLY A 97 5 5 HELIX 3 3 LYS A 116 LEU A 131 1 16 HELIX 4 4 THR A 174 GLN A 187 1 14 HELIX 5 5 PRO A 211 ILE A 216 1 6 HELIX 6 6 GLN A 221 GLY A 225 5 5 HELIX 7 7 THR A 231 GLU A 244 1 14 HELIX 8 8 THR A 259 TYR A 266 1 8 HELIX 9 9 GLY A 267 ASN A 270 5 4 HELIX 10 10 ALA A 293 SER A 311 1 19 HELIX 11 11 SER A 327 TYR A 345 1 19 HELIX 12 12 PRO A 354 SER A 358 5 5 HELIX 13 13 GLY A 377 GLY A 384 1 8 HELIX 14 14 PRO A 391 TYR A 395 5 5 HELIX 15 15 ASN A 415 ASN A 421 1 7 HELIX 16 16 ASP A 423 ILE A 428 1 6 HELIX 17 17 THR A 447 TYR A 456 1 10 HELIX 18 18 PRO A 457 THR A 468 1 12 HELIX 19 19 ALA A 469 ARG A 473 5 5 HELIX 20 20 ASN A 474 LYS A 492 1 19 SHEET 1 A 7 SER A 24 VAL A 33 0 SHEET 2 A 7 VAL A 147 ASP A 155 -1 O ILE A 148 N PHE A 32 SHEET 3 A 7 TYR A 101 THR A 105 -1 N LEU A 103 O ILE A 153 SHEET 4 A 7 GLN A 109 ALA A 114 -1 O THR A 113 N ASP A 102 SHEET 5 A 7 SER A 84 THR A 88 1 N TYR A 86 O VAL A 110 SHEET 6 A 7 SER A 39 ALA A 43 1 N PHE A 41 O ILE A 85 SHEET 7 A 7 SER A 73 LYS A 76 1 O VAL A 75 N ILE A 40 SHEET 1 B 9 TYR A 161 ASP A 167 0 SHEET 2 B 9 LYS A 192 HIS A 196 1 O HIS A 194 N LEU A 164 SHEET 3 B 9 GLU A 248 GLU A 252 1 O GLU A 248 N PHE A 193 SHEET 4 B 9 TYR A 315 HIS A 317 1 O HIS A 317 N PRO A 251 SHEET 5 B 9 LYS A 348 TRP A 352 1 O VAL A 350 N ILE A 316 SHEET 6 B 9 VAL A 366 ASN A 369 1 O GLN A 368 N GLY A 351 SHEET 7 B 9 LYS A 386 VAL A 389 1 O ILE A 388 N LEU A 367 SHEET 8 B 9 ASN A 432 LEU A 440 1 O GLY A 435 N VAL A 389 SHEET 9 B 9 TYR A 161 ASP A 167 1 N MET A 165 O SER A 438 CISPEP 1 LEU A 19 PRO A 20 0 2.24 CISPEP 2 MET A 255 PRO A 256 0 -2.64 CISPEP 3 ASP A 353 PRO A 354 0 5.46 CISPEP 4 TYR A 456 PRO A 457 0 9.44 CRYST1 95.667 102.123 108.074 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010453 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009792 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009253 0.00000