data_3GI0 # _entry.id 3GI0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GI0 pdb_00003gi0 10.2210/pdb3gi0/pdb RCSB RCSB051884 ? ? WWPDB D_1000051884 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3FSM _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GI0 _pdbx_database_status.recvd_initial_deposition_date 2009-03-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Torbeev, V.Y.' 1 'Kent, S.B.H.' 2 # _citation.id primary _citation.title 'Correlations of protein dynamics with function in HIV-1 protease catalysis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Torbeev, V.Y.' 1 ? primary 'Kent, S.B.H.' 2 ? # _cell.entry_id 3GI0 _cell.length_a 51.172 _cell.length_b 58.456 _cell.length_c 60.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GI0 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;COVALENT DIMER [L-ALA51,D-ALA51'] HIV-1 PROTEASE ; 21919.703 2 3.4.23.16 ? ? ? 2 polymer syn 'JG-365 inhibitor' 845.039 2 ? ? ? ? 3 water nat water 18.015 96 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEE(NLE)NLPG(YCM)WKPK(NLE)IGGIAGFIKVRQYDQIPVEI (ABA)GHKAIGTVLVGPTPVNIIGRNLLTQIG(ABA)TLNF(YCM)GGGGPQITLWKRPLVTIRIGGQLKEALLDTGADD TVIEE(NLE)NLPG(YCM)WKPK(NLE)IGGI(DAL)GFIKVRQYDQIPVEI(ABA)GHKAIGTVLVGPTPVNIIGRNLL TQIG(ABA)TLNF ; ;PQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEELNLPGCWKPKLIGGIAGFIKVRQYDQIPVEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNFCGGGGPQITLWKRPLVTIRIGGQLKEALLDTGADDTVIEELNLPGCWKPKLIGGIAGFIKV RQYDQIPVEIAGHKAIGTVLVGPTPVNIIGRNLLTQIGATLNF ; A,B ? 2 'polypeptide(L)' no yes '(ACE)SLN(JG3)I(VME)' XSLNXIX C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 ARG n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 NLE n 1 37 ASN n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 YCM n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 NLE n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 ALA n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 PRO n 1 64 VAL n 1 65 GLU n 1 66 ILE n 1 67 ABA n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 ABA n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n 1 100 YCM n 1 101 GLY n 1 102 GLY n 1 103 GLY n 1 104 GLY n 1 105 PRO n 1 106 GLN n 1 107 ILE n 1 108 THR n 1 109 LEU n 1 110 TRP n 1 111 LYS n 1 112 ARG n 1 113 PRO n 1 114 LEU n 1 115 VAL n 1 116 THR n 1 117 ILE n 1 118 ARG n 1 119 ILE n 1 120 GLY n 1 121 GLY n 1 122 GLN n 1 123 LEU n 1 124 LYS n 1 125 GLU n 1 126 ALA n 1 127 LEU n 1 128 LEU n 1 129 ASP n 1 130 THR n 1 131 GLY n 1 132 ALA n 1 133 ASP n 1 134 ASP n 1 135 THR n 1 136 VAL n 1 137 ILE n 1 138 GLU n 1 139 GLU n 1 140 NLE n 1 141 ASN n 1 142 LEU n 1 143 PRO n 1 144 GLY n 1 145 YCM n 1 146 TRP n 1 147 LYS n 1 148 PRO n 1 149 LYS n 1 150 NLE n 1 151 ILE n 1 152 GLY n 1 153 GLY n 1 154 ILE n 1 155 DAL n 1 156 GLY n 1 157 PHE n 1 158 ILE n 1 159 LYS n 1 160 VAL n 1 161 ARG n 1 162 GLN n 1 163 TYR n 1 164 ASP n 1 165 GLN n 1 166 ILE n 1 167 PRO n 1 168 VAL n 1 169 GLU n 1 170 ILE n 1 171 ABA n 1 172 GLY n 1 173 HIS n 1 174 LYS n 1 175 ALA n 1 176 ILE n 1 177 GLY n 1 178 THR n 1 179 VAL n 1 180 LEU n 1 181 VAL n 1 182 GLY n 1 183 PRO n 1 184 THR n 1 185 PRO n 1 186 VAL n 1 187 ASN n 1 188 ILE n 1 189 ILE n 1 190 GLY n 1 191 ARG n 1 192 ASN n 1 193 LEU n 1 194 LEU n 1 195 THR n 1 196 GLN n 1 197 ILE n 1 198 GLY n 1 199 ABA n 1 200 THR n 1 201 LEU n 1 202 ASN n 1 203 PHE n 2 1 ACE n 2 2 SER n 2 3 LEU n 2 4 ASN n 2 5 JG3 n 2 6 ILE n 2 7 VME n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 99 'Homo sapiens' human 9606 'total chemical protein synthesis' 1 2 sample 105 203 'Homo sapiens' human 9606 'total chemical protein synthesis' 2 1 sample ? ? 'synthetic construct' ? 32630 'chemical peptide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP POL_HV1A2 P03369 1 491 ;PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPVEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; ? 2 PDB 3GI0 3GI0 2 1 XSLNXIX ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GI0 A 1 ? 99 ? P03369 491 ? 589 ? 1 99 2 1 3GI0 A 105 ? 203 ? P03369 491 ? 589 ? 105 203 3 1 3GI0 B 1 ? 99 ? P03369 491 ? 589 ? 1 99 4 1 3GI0 B 105 ? 203 ? P03369 491 ? 589 ? 105 203 5 2 3GI0 C 1 ? 7 ? 3GI0 1 ? 7 ? 1 7 6 2 3GI0 D 1 ? 7 ? 3GI0 1 ? 7 ? 1 7 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GI0 LYS A 7 ? PDB POL_HV1A2 GLN 497 'SEE REMARK 999' 7 1 1 3GI0 ILE A 33 ? PDB POL_HV1A2 LEU 523 'SEE REMARK 999' 33 2 1 3GI0 NLE A 36 ? PDB POL_HV1A2 MET 526 'SEE REMARK 999' 36 3 1 3GI0 YCM A 41 ? PDB POL_HV1A2 LYS 531 'SEE REMARK 999' 41 4 1 3GI0 NLE A 46 ? PDB POL_HV1A2 MET 536 'SEE REMARK 999' 46 5 1 3GI0 ALA A 51 ? PDB POL_HV1A2 GLY 541 'SEE REMARK 999' 51 6 1 3GI0 ABA A 67 ? PDB POL_HV1A2 CYS 557 'SEE REMARK 999' 67 7 1 3GI0 ABA A 95 ? PDB POL_HV1A2 CYS 585 'SEE REMARK 999' 95 8 1 3GI0 YCM A 100 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 100 9 1 3GI0 GLY A 101 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 101 10 1 3GI0 GLY A 102 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 102 11 1 3GI0 GLY A 103 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 103 12 1 3GI0 GLY A 104 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 104 13 2 3GI0 LYS A 111 ? PDB POL_HV1A2 GLN 497 'SEE REMARK 999' 111 14 2 3GI0 ILE A 137 ? PDB POL_HV1A2 LEU 523 'SEE REMARK 999' 137 15 2 3GI0 NLE A 140 ? PDB POL_HV1A2 MET 526 'SEE REMARK 999' 140 16 2 3GI0 YCM A 145 ? PDB POL_HV1A2 LYS 531 'SEE REMARK 999' 145 17 2 3GI0 NLE A 150 ? PDB POL_HV1A2 MET 536 'SEE REMARK 999' 150 18 2 3GI0 DAL A 155 ? PDB POL_HV1A2 GLY 541 'SEE REMARK 999' 155 19 2 3GI0 ABA A 171 ? PDB POL_HV1A2 CYS 557 'SEE REMARK 999' 171 20 2 3GI0 ABA A 199 ? PDB POL_HV1A2 CYS 585 'SEE REMARK 999' 199 21 3 3GI0 LYS B 7 ? PDB POL_HV1A2 GLN 497 'SEE REMARK 999' 7 22 3 3GI0 ILE B 33 ? PDB POL_HV1A2 LEU 523 'SEE REMARK 999' 33 23 3 3GI0 NLE B 36 ? PDB POL_HV1A2 MET 526 'SEE REMARK 999' 36 24 3 3GI0 YCM B 41 ? PDB POL_HV1A2 LYS 531 'SEE REMARK 999' 41 25 3 3GI0 NLE B 46 ? PDB POL_HV1A2 MET 536 'SEE REMARK 999' 46 26 3 3GI0 ALA B 51 ? PDB POL_HV1A2 GLY 541 'SEE REMARK 999' 51 27 3 3GI0 ABA B 67 ? PDB POL_HV1A2 CYS 557 'SEE REMARK 999' 67 28 3 3GI0 ABA B 95 ? PDB POL_HV1A2 CYS 585 'SEE REMARK 999' 95 29 3 3GI0 YCM B 100 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 100 30 3 3GI0 GLY B 101 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 101 31 3 3GI0 GLY B 102 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 102 32 3 3GI0 GLY B 103 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 103 33 3 3GI0 GLY B 104 ? PDB POL_HV1A2 ? ? 'SEE REMARK 999' 104 34 4 3GI0 LYS B 111 ? PDB POL_HV1A2 GLN 497 'SEE REMARK 999' 111 35 4 3GI0 ILE B 137 ? PDB POL_HV1A2 LEU 523 'SEE REMARK 999' 137 36 4 3GI0 NLE B 140 ? PDB POL_HV1A2 MET 526 'SEE REMARK 999' 140 37 4 3GI0 YCM B 145 ? PDB POL_HV1A2 LYS 531 'SEE REMARK 999' 145 38 4 3GI0 NLE B 150 ? PDB POL_HV1A2 MET 536 'SEE REMARK 999' 150 39 4 3GI0 DAL B 155 ? PDB POL_HV1A2 GLY 541 'SEE REMARK 999' 155 40 4 3GI0 ABA B 171 ? PDB POL_HV1A2 CYS 557 'SEE REMARK 999' 171 41 4 3GI0 ABA B 199 ? PDB POL_HV1A2 CYS 585 'SEE REMARK 999' 199 42 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ABA 'L-peptide linking' n 'ALPHA-AMINOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JG3 peptide-like . '1-[(2S,3S)-3-amino-2-hydroxy-4-phenylbutyl]-L-proline' ? 'C15 H22 N2 O3' 278.347 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VME peptide-like . 'METHYL L-VALINATE' O-METHYLVALINE 'C6 H13 N O2' 131.173 YCM 'L-peptide linking' n 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' CYSTEINE-S-ACETAMIDE 'C5 H10 N2 O3 S' 178.209 # _exptl.entry_id 3GI0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.1M CITRATE, 0.2M SODIUM PHOPHATE,30% (W/V) AMMONIUM SULFATE, 10% (V/V) DMSO , PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K ; # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-08-10 _diffrn_detector.details ;double crystal monochromator and K-B pair of biomorph mirrors for vertical and horizontal focusing ; # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97934 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3GI0 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.80 _reflns.number_obs 17520 _reflns.number_all 17520 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.22 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.438 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.86 _reflns_shell.pdbx_redundancy 6.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3GI0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 16579 _refine.ls_number_reflns_all 16579 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.90 _refine.ls_R_factor_obs 0.19016 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18778 _refine.ls_R_factor_R_free 0.23682 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 883 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.929 _refine.B_iso_mean 20.294 _refine.aniso_B[1][1] -0.65 _refine.aniso_B[2][2] 0.23 _refine.aniso_B[3][3] 0.42 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. SEE REMARK 999 FOR THE SPECIAL STRUCTURAL SOLUTION' _refine.pdbx_starting_model 'PDB entry 3FSM' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.153 _refine.pdbx_overall_ESU_R_Free 0.144 _refine.overall_SU_ML 0.086 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.486 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3212 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 96 _refine_hist.number_atoms_total 3308 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 1774 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.673 1.982 ? 2403 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.430 5.000 ? 228 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43.139 25.082 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.533 15.000 ? 303 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.514 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.123 0.200 ? 279 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1259 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.206 0.200 ? 745 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.320 0.200 ? 1163 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.174 0.200 ? 106 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.044 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.175 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.195 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.057 1.500 ? 1171 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.557 2.000 ? 1839 'X-RAY DIFFRACTION' ? r_scbond_it 2.569 3.000 ? 685 'X-RAY DIFFRACTION' ? r_scangle_it 3.931 4.500 ? 564 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.801 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 1206 _refine_ls_shell.R_factor_R_work 0.181 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.234 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3GI0 _struct.title ;Crystal structure of a chemically synthesized 203 amino acid 'covalent dimer' [l-ala51,d-ala51'] hiv-1 protease molecule complexed with jg-365 inhibitor ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GI0 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'beta-barrel, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 YCM A 100 ? GLY A 103 ? YCM A 100 GLY A 103 5 ? 4 HELX_P HELX_P3 3 GLY A 190 ? THR A 195 ? GLY A 190 THR A 195 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 35 C A ? ? 1_555 A NLE 36 N A ? A GLU 35 A NLE 36 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale2 covale both ? A NLE 36 C A ? ? 1_555 A ASN 37 N A ? A NLE 36 A ASN 37 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A GLY 40 C A ? ? 1_555 A YCM 41 N A ? A GLY 40 A YCM 41 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A YCM 41 C A ? ? 1_555 A TRP 42 N A ? A YCM 41 A TRP 42 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale5 covale both ? A LYS 45 C A ? ? 1_555 A NLE 46 N A ? A LYS 45 A NLE 46 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale6 covale both ? A NLE 46 C A ? ? 1_555 A ILE 47 N A ? A NLE 46 A ILE 47 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A ILE 66 C A ? ? 1_555 A ABA 67 N A ? A ILE 66 A ABA 67 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? A ABA 67 C A ? ? 1_555 A GLY 68 N A ? A ABA 67 A GLY 68 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A GLY 94 C A ? ? 1_555 A ABA 95 N A ? A GLY 94 A ABA 95 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A ABA 95 C A ? ? 1_555 A THR 96 N A ? A ABA 95 A THR 96 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale11 covale both ? A PHE 99 C A ? ? 1_555 A YCM 100 N A ? A PHE 99 A YCM 100 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale12 covale both ? A YCM 100 C A ? ? 1_555 A GLY 101 N A ? A YCM 100 A GLY 101 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? A GLU 139 C A ? ? 1_555 A NLE 140 N A ? A GLU 139 A NLE 140 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale14 covale both ? A NLE 140 C A ? ? 1_555 A ASN 141 N A ? A NLE 140 A ASN 141 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale15 covale both ? A GLY 144 C A ? ? 1_555 A YCM 145 N A ? A GLY 144 A YCM 145 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale16 covale both ? A YCM 145 C A ? ? 1_555 A TRP 146 N A ? A YCM 145 A TRP 146 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale17 covale both ? A LYS 149 C A ? ? 1_555 A NLE 150 N A ? A LYS 149 A NLE 150 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale18 covale both ? A NLE 150 C A ? ? 1_555 A ILE 151 N A ? A NLE 150 A ILE 151 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? A ILE 154 C A ? ? 1_555 A DAL 155 N A ? A ILE 154 A DAL 155 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale20 covale both ? A DAL 155 C A ? ? 1_555 A GLY 156 N A ? A DAL 155 A GLY 156 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale21 covale both ? A ILE 170 C A ? ? 1_555 A ABA 171 N A ? A ILE 170 A ABA 171 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale22 covale both ? A ABA 171 C A ? ? 1_555 A GLY 172 N A ? A ABA 171 A GLY 172 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale23 covale both ? A GLY 198 C A ? ? 1_555 A ABA 199 N A ? A GLY 198 A ABA 199 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale24 covale both ? A ABA 199 C A ? ? 1_555 A THR 200 N A ? A ABA 199 A THR 200 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale25 covale both ? B GLU 35 C B ? ? 1_555 B NLE 36 N B ? B GLU 35 B NLE 36 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale26 covale both ? B NLE 36 C B ? ? 1_555 B ASN 37 N B ? B NLE 36 B ASN 37 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale27 covale both ? B GLY 40 C B ? ? 1_555 B YCM 41 N B ? B GLY 40 B YCM 41 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale28 covale both ? B YCM 41 C B ? ? 1_555 B TRP 42 N B ? B YCM 41 B TRP 42 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale29 covale both ? B LYS 45 C B ? ? 1_555 B NLE 46 N B ? B LYS 45 B NLE 46 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale30 covale both ? B NLE 46 C B ? ? 1_555 B ILE 47 N B ? B NLE 46 B ILE 47 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale31 covale both ? B ILE 66 C B ? ? 1_555 B ABA 67 N B ? B ILE 66 B ABA 67 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale32 covale both ? B ABA 67 C B ? ? 1_555 B GLY 68 N B ? B ABA 67 B GLY 68 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale33 covale both ? B GLY 94 C B ? ? 1_555 B ABA 95 N B ? B GLY 94 B ABA 95 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale34 covale both ? B ABA 95 C B ? ? 1_555 B THR 96 N B ? B ABA 95 B THR 96 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale35 covale both ? B PHE 99 C B ? ? 1_555 B YCM 100 N B ? B PHE 99 B YCM 100 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale36 covale both ? B YCM 100 C B ? ? 1_555 B GLY 101 N B ? B YCM 100 B GLY 101 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale37 covale both ? B GLU 139 C B ? ? 1_555 B NLE 140 N B ? B GLU 139 B NLE 140 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale38 covale both ? B NLE 140 C B ? ? 1_555 B ASN 141 N B ? B NLE 140 B ASN 141 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale39 covale both ? B GLY 144 C B ? ? 1_555 B YCM 145 N B ? B GLY 144 B YCM 145 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale40 covale both ? B YCM 145 C B ? ? 1_555 B TRP 146 N B ? B YCM 145 B TRP 146 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale41 covale both ? B LYS 149 C B ? ? 1_555 B NLE 150 N B ? B LYS 149 B NLE 150 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale42 covale both ? B NLE 150 C B ? ? 1_555 B ILE 151 N B ? B NLE 150 B ILE 151 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale43 covale both ? B ILE 154 C B ? ? 1_555 B DAL 155 N B ? B ILE 154 B DAL 155 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale44 covale both ? B DAL 155 C B ? ? 1_555 B GLY 156 N B ? B DAL 155 B GLY 156 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale45 covale both ? B ILE 170 C B ? ? 1_555 B ABA 171 N B ? B ILE 170 B ABA 171 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale46 covale both ? B ABA 171 C B ? ? 1_555 B GLY 172 N B ? B ABA 171 B GLY 172 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale47 covale both ? B GLY 198 C B ? ? 1_555 B ABA 199 N B ? B GLY 198 B ABA 199 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale48 covale both ? B ABA 199 C B ? ? 1_555 B THR 200 N B ? B ABA 199 B THR 200 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale49 covale both ? C ACE 1 C A ? ? 1_555 C SER 2 N A ? C ACE 1 C SER 2 1_555 ? ? ? ? ? ? ? 1.336 sing ? covale50 covale both ? C ASN 4 C A ? ? 1_555 C JG3 5 N A ? C ASN 4 C JG3 5 1_555 ? ? ? ? ? ? ? 1.331 sing ? covale51 covale both ? C JG3 5 C A ? ? 1_555 C ILE 6 N A ? C JG3 5 C ILE 6 1_555 ? ? ? ? ? ? ? 1.330 sing ? covale52 covale both ? C ILE 6 C A ? ? 1_555 C VME 7 N A ? C ILE 6 C VME 7 1_555 ? ? ? ? ? ? ? 1.322 sing ? covale53 covale both ? D ACE 1 C B ? ? 1_555 D SER 2 N B ? D ACE 1 D SER 2 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale54 covale both ? D ASN 4 C B ? ? 1_555 D JG3 5 N B ? D ASN 4 D JG3 5 1_555 ? ? ? ? ? ? ? 1.334 sing ? covale55 covale both ? D JG3 5 C B ? ? 1_555 D ILE 6 N B ? D JG3 5 D ILE 6 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale56 covale both ? D ILE 6 C B ? ? 1_555 D VME 7 N B ? D ILE 6 D VME 7 1_555 ? ? ? ? ? ? ? 1.331 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR A 200 ? ASN A 202 ? THR A 200 ASN A 202 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN A 106 ? ILE A 107 ? GLN A 106 ILE A 107 B 1 TRP A 42 ? GLY A 49 ? TRP A 42 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 VAL A 32 ? ILE A 33 ? VAL A 32 ILE A 33 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS A 147 ? GLY A 153 ? LYS A 147 GLY A 153 C 2 GLY A 156 ? ILE A 170 ? GLY A 156 ILE A 170 C 3 HIS A 173 ? VAL A 181 ? HIS A 173 VAL A 181 C 4 VAL A 136 ? ILE A 137 ? VAL A 136 ILE A 137 C 5 ILE A 188 ? ILE A 189 ? ILE A 188 ILE A 189 C 6 GLN A 122 ? LEU A 128 ? GLN A 122 LEU A 128 C 7 LEU A 114 ? ILE A 119 ? LEU A 114 ILE A 119 C 8 GLY A 156 ? ILE A 170 ? GLY A 156 ILE A 170 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU A 201 ? O LEU A 201 A 2 3 O THR A 200 ? O THR A 200 N ASN A 98 ? N ASN A 98 A 3 4 N LEU A 97 ? N LEU A 97 O ILE A 107 ? O ILE A 107 B 1 2 N LYS A 45 ? N LYS A 45 O VAL A 56 ? O VAL A 56 B 2 3 N ILE A 66 ? N ILE A 66 O HIS A 69 ? O HIS A 69 B 3 4 O LEU A 76 ? O LEU A 76 N ILE A 33 ? N ILE A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N ARG A 14 ? N ARG A 14 O GLU A 65 ? O GLU A 65 C 1 2 N LYS A 149 ? N LYS A 149 O VAL A 160 ? O VAL A 160 C 2 3 N ILE A 170 ? N ILE A 170 O HIS A 173 ? O HIS A 173 C 3 4 O LEU A 180 ? O LEU A 180 N ILE A 137 ? N ILE A 137 C 4 5 N VAL A 136 ? N VAL A 136 O ILE A 188 ? O ILE A 188 C 5 6 O ILE A 189 ? O ILE A 189 N LEU A 127 ? N LEU A 127 C 6 7 O GLN A 122 ? O GLN A 122 N ILE A 119 ? N ILE A 119 C 7 8 N ARG A 118 ? N ARG A 118 O GLU A 169 ? O GLU A 169 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DAL 155 ? 7 'BINDING SITE FOR RESIDUE DAL A 155' AC2 Software B DAL 155 ? 7 'BINDING SITE FOR RESIDUE DAL B 155' AC3 Software ? ? ? ? 20 'BINDING SITE FOR CHAIN C OF JG-365 INHIBITOR' AC4 Software ? ? ? ? 20 'BINDING SITE FOR CHAIN D OF JG-365 INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ALA A 51 ? ALA A 51 . ? 1_555 ? 2 AC1 7 PHE A 53 ? PHE A 53 . ? 1_555 ? 3 AC1 7 ILE A 54 ? ILE A 54 . ? 1_555 ? 4 AC1 7 GLY A 153 ? GLY A 153 . ? 1_555 ? 5 AC1 7 ILE A 154 ? ILE A 154 . ? 1_555 ? 6 AC1 7 GLY A 156 ? GLY A 156 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 263 . ? 1_555 ? 8 AC2 7 HOH E . ? HOH A 259 . ? 1_555 ? 9 AC2 7 ALA B 51 ? ALA B 51 . ? 1_555 ? 10 AC2 7 GLY B 52 ? GLY B 52 . ? 1_555 ? 11 AC2 7 PHE B 53 ? PHE B 53 . ? 1_555 ? 12 AC2 7 GLY B 153 ? GLY B 153 . ? 1_555 ? 13 AC2 7 ILE B 154 ? ILE B 154 . ? 1_555 ? 14 AC2 7 GLY B 156 ? GLY B 156 . ? 1_555 ? 15 AC3 20 ARG A 8 ? ARG A 8 . ? 1_555 ? 16 AC3 20 ASP A 25 ? ASP A 25 . ? 1_555 ? 17 AC3 20 GLY A 27 ? GLY A 27 . ? 1_555 ? 18 AC3 20 ALA A 28 ? ALA A 28 . ? 1_555 ? 19 AC3 20 ASP A 29 ? ASP A 29 . ? 1_555 ? 20 AC3 20 ASP A 30 ? ASP A 30 . ? 1_555 ? 21 AC3 20 ILE A 47 ? ILE A 47 . ? 1_555 ? 22 AC3 20 GLY A 48 ? GLY A 48 . ? 1_555 ? 23 AC3 20 GLY A 49 ? GLY A 49 . ? 1_555 ? 24 AC3 20 ILE A 50 ? ILE A 50 . ? 1_555 ? 25 AC3 20 ARG A 112 ? ARG A 112 . ? 1_555 ? 26 AC3 20 ASP A 129 ? ASP A 129 . ? 1_555 ? 27 AC3 20 GLY A 131 ? GLY A 131 . ? 1_555 ? 28 AC3 20 ALA A 132 ? ALA A 132 . ? 1_555 ? 29 AC3 20 ASP A 133 ? ASP A 133 . ? 1_555 ? 30 AC3 20 GLY A 152 ? GLY A 152 . ? 1_555 ? 31 AC3 20 GLY A 153 ? GLY A 153 . ? 1_555 ? 32 AC3 20 PRO A 185 ? PRO A 185 . ? 1_555 ? 33 AC3 20 VAL A 186 ? VAL A 186 . ? 1_555 ? 34 AC3 20 HOH E . ? HOH A 207 . ? 1_555 ? 35 AC4 20 HOH E . ? HOH A 207 . ? 1_555 ? 36 AC4 20 ARG B 8 ? ARG B 8 . ? 1_555 ? 37 AC4 20 ASP B 25 ? ASP B 25 . ? 1_555 ? 38 AC4 20 GLY B 27 ? GLY B 27 . ? 1_555 ? 39 AC4 20 ALA B 28 ? ALA B 28 . ? 1_555 ? 40 AC4 20 ASP B 29 ? ASP B 29 . ? 1_555 ? 41 AC4 20 ASP B 30 ? ASP B 30 . ? 1_555 ? 42 AC4 20 ILE B 47 ? ILE B 47 . ? 1_555 ? 43 AC4 20 GLY B 48 ? GLY B 48 . ? 1_555 ? 44 AC4 20 GLY B 49 ? GLY B 49 . ? 1_555 ? 45 AC4 20 ILE B 50 ? ILE B 50 . ? 1_555 ? 46 AC4 20 ILE B 84 ? ILE B 84 . ? 1_555 ? 47 AC4 20 ASP B 129 ? ASP B 129 . ? 1_555 ? 48 AC4 20 GLY B 131 ? GLY B 131 . ? 1_555 ? 49 AC4 20 ASP B 133 ? ASP B 133 . ? 1_555 ? 50 AC4 20 GLY B 152 ? GLY B 152 . ? 1_555 ? 51 AC4 20 GLY B 153 ? GLY B 153 . ? 1_555 ? 52 AC4 20 ILE B 154 ? ILE B 154 . ? 1_555 ? 53 AC4 20 PRO B 185 ? PRO B 185 . ? 1_555 ? 54 AC4 20 ILE B 188 ? ILE B 188 . ? 1_555 ? # _database_PDB_matrix.entry_id 3GI0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GI0 _atom_sites.fract_transf_matrix[1][1] 0.019542 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017107 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016407 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 NLE 36 36 36 NLE NLE A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 YCM 41 41 41 YCM YCM A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 NLE 46 46 46 NLE NLE A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ABA 67 67 67 ABA ABA A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ABA 95 95 95 ABA ABA A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 YCM 100 100 100 YCM YCM A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 NLE 140 140 140 NLE NLE A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 YCM 145 145 145 YCM YCM A . n A 1 146 TRP 146 146 146 TRP TRP A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 NLE 150 150 150 NLE NLE A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 DAL 155 155 155 DAL DAL A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 PHE 157 157 157 PHE PHE A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 TYR 163 163 163 TYR TYR A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 ABA 171 171 171 ABA ABA A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 VAL 181 181 181 VAL VAL A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 PRO 183 183 183 PRO PRO A . n A 1 184 THR 184 184 184 THR THR A . n A 1 185 PRO 185 185 185 PRO PRO A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 ASN 192 192 192 ASN ASN A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 THR 195 195 195 THR THR A . n A 1 196 GLN 196 196 196 GLN GLN A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 ABA 199 199 199 ABA ABA A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 PHE 203 203 203 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 NLE 36 36 36 NLE NLE B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 YCM 41 41 41 YCM YCM B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 NLE 46 46 46 NLE NLE B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 ALA 51 51 51 ALA ALA B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 ABA 67 67 67 ABA ABA B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 ABA 95 95 95 ABA ABA B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n B 1 100 YCM 100 100 100 YCM YCM B . n B 1 101 GLY 101 101 101 GLY GLY B . n B 1 102 GLY 102 102 102 GLY GLY B . n B 1 103 GLY 103 103 103 GLY GLY B . n B 1 104 GLY 104 104 104 GLY GLY B . n B 1 105 PRO 105 105 105 PRO PRO B . n B 1 106 GLN 106 106 106 GLN GLN B . n B 1 107 ILE 107 107 107 ILE ILE B . n B 1 108 THR 108 108 108 THR THR B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 TRP 110 110 110 TRP TRP B . n B 1 111 LYS 111 111 111 LYS LYS B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 PRO 113 113 113 PRO PRO B . n B 1 114 LEU 114 114 114 LEU LEU B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 THR 116 116 116 THR THR B . n B 1 117 ILE 117 117 117 ILE ILE B . n B 1 118 ARG 118 118 118 ARG ARG B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 GLY 120 120 120 GLY GLY B . n B 1 121 GLY 121 121 121 GLY GLY B . n B 1 122 GLN 122 122 122 GLN GLN B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 LYS 124 124 124 LYS LYS B . n B 1 125 GLU 125 125 125 GLU GLU B . n B 1 126 ALA 126 126 126 ALA ALA B . n B 1 127 LEU 127 127 127 LEU LEU B . n B 1 128 LEU 128 128 128 LEU LEU B . n B 1 129 ASP 129 129 129 ASP ASP B . n B 1 130 THR 130 130 130 THR THR B . n B 1 131 GLY 131 131 131 GLY GLY B . n B 1 132 ALA 132 132 132 ALA ALA B . n B 1 133 ASP 133 133 133 ASP ASP B . n B 1 134 ASP 134 134 134 ASP ASP B . n B 1 135 THR 135 135 135 THR THR B . n B 1 136 VAL 136 136 136 VAL VAL B . n B 1 137 ILE 137 137 137 ILE ILE B . n B 1 138 GLU 138 138 138 GLU GLU B . n B 1 139 GLU 139 139 139 GLU GLU B . n B 1 140 NLE 140 140 140 NLE NLE B . n B 1 141 ASN 141 141 141 ASN ASN B . n B 1 142 LEU 142 142 142 LEU LEU B . n B 1 143 PRO 143 143 143 PRO PRO B . n B 1 144 GLY 144 144 144 GLY GLY B . n B 1 145 YCM 145 145 145 YCM YCM B . n B 1 146 TRP 146 146 146 TRP TRP B . n B 1 147 LYS 147 147 147 LYS LYS B . n B 1 148 PRO 148 148 148 PRO PRO B . n B 1 149 LYS 149 149 149 LYS LYS B . n B 1 150 NLE 150 150 150 NLE NLE B . n B 1 151 ILE 151 151 151 ILE ILE B . n B 1 152 GLY 152 152 152 GLY GLY B . n B 1 153 GLY 153 153 153 GLY GLY B . n B 1 154 ILE 154 154 154 ILE ILE B . n B 1 155 DAL 155 155 155 DAL DAL B . n B 1 156 GLY 156 156 156 GLY GLY B . n B 1 157 PHE 157 157 157 PHE PHE B . n B 1 158 ILE 158 158 158 ILE ILE B . n B 1 159 LYS 159 159 159 LYS LYS B . n B 1 160 VAL 160 160 160 VAL VAL B . n B 1 161 ARG 161 161 161 ARG ARG B . n B 1 162 GLN 162 162 162 GLN GLN B . n B 1 163 TYR 163 163 163 TYR TYR B . n B 1 164 ASP 164 164 164 ASP ASP B . n B 1 165 GLN 165 165 165 GLN GLN B . n B 1 166 ILE 166 166 166 ILE ILE B . n B 1 167 PRO 167 167 167 PRO PRO B . n B 1 168 VAL 168 168 168 VAL VAL B . n B 1 169 GLU 169 169 169 GLU GLU B . n B 1 170 ILE 170 170 170 ILE ILE B . n B 1 171 ABA 171 171 171 ABA ABA B . n B 1 172 GLY 172 172 172 GLY GLY B . n B 1 173 HIS 173 173 173 HIS HIS B . n B 1 174 LYS 174 174 174 LYS LYS B . n B 1 175 ALA 175 175 175 ALA ALA B . n B 1 176 ILE 176 176 176 ILE ILE B . n B 1 177 GLY 177 177 177 GLY GLY B . n B 1 178 THR 178 178 178 THR THR B . n B 1 179 VAL 179 179 179 VAL VAL B . n B 1 180 LEU 180 180 180 LEU LEU B . n B 1 181 VAL 181 181 181 VAL VAL B . n B 1 182 GLY 182 182 182 GLY GLY B . n B 1 183 PRO 183 183 183 PRO PRO B . n B 1 184 THR 184 184 184 THR THR B . n B 1 185 PRO 185 185 185 PRO PRO B . n B 1 186 VAL 186 186 186 VAL VAL B . n B 1 187 ASN 187 187 187 ASN ASN B . n B 1 188 ILE 188 188 188 ILE ILE B . n B 1 189 ILE 189 189 189 ILE ILE B . n B 1 190 GLY 190 190 190 GLY GLY B . n B 1 191 ARG 191 191 191 ARG ARG B . n B 1 192 ASN 192 192 192 ASN ASN B . n B 1 193 LEU 193 193 193 LEU LEU B . n B 1 194 LEU 194 194 194 LEU LEU B . n B 1 195 THR 195 195 195 THR THR B . n B 1 196 GLN 196 196 196 GLN GLN B . n B 1 197 ILE 197 197 197 ILE ILE B . n B 1 198 GLY 198 198 198 GLY GLY B . n B 1 199 ABA 199 199 199 ABA ABA B . n B 1 200 THR 200 200 200 THR THR B . n B 1 201 LEU 201 201 201 LEU LEU B . n B 1 202 ASN 202 202 202 ASN ASN B . n B 1 203 PHE 203 203 203 PHE PHE B . n C 2 1 ACE 1 1 1 ACE ACE C . n C 2 2 SER 2 2 2 SER SER C . n C 2 3 LEU 3 3 3 LEU LEU C . n C 2 4 ASN 4 4 4 ASN ASN C . n C 2 5 JG3 5 5 5 JG3 JG3 C . n C 2 6 ILE 6 6 6 ILE ILE C . n C 2 7 VME 7 7 7 VME VME C . n D 2 1 ACE 1 1 1 ACE ACE D . n D 2 2 SER 2 2 2 SER SER D . n D 2 3 LEU 3 3 3 LEU LEU D . n D 2 4 ASN 4 4 4 ASN ASN D . n D 2 5 JG3 5 5 5 JG3 JG3 D . n D 2 6 ILE 6 6 6 ILE ILE D . n D 2 7 VME 7 7 7 VME VME D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 204 204 HOH HOH A . E 3 HOH 2 205 205 HOH HOH A . E 3 HOH 3 206 206 HOH HOH A . E 3 HOH 4 207 207 HOH HOH A . E 3 HOH 5 208 208 HOH HOH A . E 3 HOH 6 209 209 HOH HOH A . E 3 HOH 7 210 210 HOH HOH A . E 3 HOH 8 211 211 HOH HOH A . E 3 HOH 9 212 212 HOH HOH A . E 3 HOH 10 213 213 HOH HOH A . E 3 HOH 11 214 214 HOH HOH A . E 3 HOH 12 215 215 HOH HOH A . E 3 HOH 13 216 216 HOH HOH A . E 3 HOH 14 217 217 HOH HOH A . E 3 HOH 15 218 218 HOH HOH A . E 3 HOH 16 219 219 HOH HOH A . E 3 HOH 17 220 220 HOH HOH A . E 3 HOH 18 221 221 HOH HOH A . E 3 HOH 19 222 222 HOH HOH A . E 3 HOH 20 223 223 HOH HOH A . E 3 HOH 21 224 224 HOH HOH A . E 3 HOH 22 225 225 HOH HOH A . E 3 HOH 23 226 226 HOH HOH A . E 3 HOH 24 227 227 HOH HOH A . E 3 HOH 25 228 228 HOH HOH A . E 3 HOH 26 229 229 HOH HOH A . E 3 HOH 27 230 230 HOH HOH A . E 3 HOH 28 231 231 HOH HOH A . E 3 HOH 29 232 232 HOH HOH A . E 3 HOH 30 233 233 HOH HOH A . E 3 HOH 31 234 234 HOH HOH A . E 3 HOH 32 235 235 HOH HOH A . E 3 HOH 33 236 236 HOH HOH A . E 3 HOH 34 237 237 HOH HOH A . E 3 HOH 35 238 238 HOH HOH A . E 3 HOH 36 239 239 HOH HOH A . E 3 HOH 37 240 240 HOH HOH A . E 3 HOH 38 241 241 HOH HOH A . E 3 HOH 39 242 242 HOH HOH A . E 3 HOH 40 243 243 HOH HOH A . E 3 HOH 41 244 244 HOH HOH A . E 3 HOH 42 245 245 HOH HOH A . E 3 HOH 43 246 246 HOH HOH A . E 3 HOH 44 247 247 HOH HOH A . E 3 HOH 45 248 248 HOH HOH A . E 3 HOH 46 249 249 HOH HOH A . E 3 HOH 47 250 250 HOH HOH A . E 3 HOH 48 251 251 HOH HOH A . E 3 HOH 49 252 252 HOH HOH A . E 3 HOH 50 253 253 HOH HOH A . E 3 HOH 51 254 254 HOH HOH A . E 3 HOH 52 255 255 HOH HOH A . E 3 HOH 53 256 256 HOH HOH A . E 3 HOH 54 257 257 HOH HOH A . E 3 HOH 55 258 258 HOH HOH A . E 3 HOH 56 259 259 HOH HOH A . E 3 HOH 57 260 260 HOH HOH A . E 3 HOH 58 261 261 HOH HOH A . E 3 HOH 59 262 262 HOH HOH A . E 3 HOH 60 263 263 HOH HOH A . E 3 HOH 61 264 264 HOH HOH A . E 3 HOH 62 265 265 HOH HOH A . E 3 HOH 63 266 266 HOH HOH A . E 3 HOH 64 267 267 HOH HOH A . E 3 HOH 65 268 268 HOH HOH A . E 3 HOH 66 269 269 HOH HOH A . E 3 HOH 67 270 270 HOH HOH A . E 3 HOH 68 271 271 HOH HOH A . E 3 HOH 69 272 272 HOH HOH A . E 3 HOH 70 273 273 HOH HOH A . E 3 HOH 71 274 274 HOH HOH A . E 3 HOH 72 275 275 HOH HOH A . E 3 HOH 73 276 276 HOH HOH A . E 3 HOH 74 277 277 HOH HOH A . E 3 HOH 75 278 278 HOH HOH A . E 3 HOH 76 279 279 HOH HOH A . E 3 HOH 77 280 280 HOH HOH A . E 3 HOH 78 281 281 HOH HOH A . E 3 HOH 79 282 282 HOH HOH A . E 3 HOH 80 283 283 HOH HOH A . E 3 HOH 81 284 284 HOH HOH A . E 3 HOH 82 285 285 HOH HOH A . E 3 HOH 83 286 286 HOH HOH A . E 3 HOH 84 287 287 HOH HOH A . E 3 HOH 85 288 288 HOH HOH A . E 3 HOH 86 289 289 HOH HOH A . E 3 HOH 87 290 290 HOH HOH A . E 3 HOH 88 291 291 HOH HOH A . E 3 HOH 89 292 292 HOH HOH A . E 3 HOH 90 293 293 HOH HOH A . E 3 HOH 91 294 294 HOH HOH A . E 3 HOH 92 295 295 HOH HOH A . E 3 HOH 93 296 296 HOH HOH A . E 3 HOH 94 297 297 HOH HOH A . E 3 HOH 95 298 298 HOH HOH A . F 3 HOH 1 299 299 HOH HOH C . # _pdbx_molecule_features.prd_id PRD_000228 _pdbx_molecule_features.name JG-365 _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000228 C 2 PRD_000228 D # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A NLE 36 A NLE 36 ? LEU NORLEUCINE 2 A YCM 41 A YCM 41 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 3 A NLE 46 A NLE 46 ? LEU NORLEUCINE 4 A ABA 67 A ABA 67 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 5 A ABA 95 A ABA 95 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 6 A YCM 100 A YCM 100 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 7 A NLE 140 A NLE 140 ? LEU NORLEUCINE 8 A YCM 145 A YCM 145 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 9 A NLE 150 A NLE 150 ? LEU NORLEUCINE 10 A ABA 171 A ABA 171 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 11 A ABA 199 A ABA 199 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 12 B NLE 36 B NLE 36 ? LEU NORLEUCINE 13 B YCM 41 B YCM 41 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 14 B NLE 46 B NLE 46 ? LEU NORLEUCINE 15 B ABA 67 B ABA 67 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 16 B ABA 95 B ABA 95 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 17 B YCM 100 B YCM 100 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 18 B NLE 140 B NLE 140 ? LEU NORLEUCINE 19 B YCM 145 B YCM 145 ? CYS 'S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE' 20 B NLE 150 B NLE 150 ? LEU NORLEUCINE 21 B ABA 171 B ABA 171 ? ALA 'ALPHA-AMINOBUTYRIC ACID' 22 B ABA 199 B ABA 199 ? ALA 'ALPHA-AMINOBUTYRIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1940 ? 1 MORE -7 ? 1 'SSA (A^2)' 9410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-10 2 'Structure model' 1 1 2012-12-12 3 'Structure model' 1 2 2017-06-07 4 'Structure model' 1 3 2023-09-06 5 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Atomic model' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 5 'Structure model' atom_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_validate_main_chain_plane 10 5 'Structure model' pdbx_validate_peptide_omega 11 5 'Structure model' pdbx_validate_rmsd_angle 12 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 6 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 5 'Structure model' '_atom_site.auth_atom_id' 20 5 'Structure model' '_atom_site.label_atom_id' 21 5 'Structure model' '_chem_comp_atom.atom_id' 22 5 'Structure model' '_chem_comp_bond.atom_id_1' 23 5 'Structure model' '_chem_comp_bond.atom_id_2' 24 5 'Structure model' '_pdbx_validate_peptide_omega.auth_comp_id_1' 25 5 'Structure model' '_pdbx_validate_peptide_omega.auth_comp_id_2' 26 5 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_1' 27 5 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_2' 28 5 'Structure model' '_pdbx_validate_peptide_omega.omega' 29 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing v.5 ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3GI0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;BOTH THE HIV-1 PROTEASE COVALENT DIMER [L-ALA51,D-ALA51'] (CHAINS A AND B) AND JG-365 INHIBITOR (CHAINS C AND D) WERE CHEMICALLY SYNTHESIZED WITH NON-NATURAL AMINO ACIDS INTRODUCED AT SEVERAL POSITIONS. THE HIV-1 PROTEASE DIMER HAS TWO COVALENTLY LINKED MONOMER PARTS, RESIDUES 1-99 AND RESIDUES 105-203, BOTH REPRESENTING ANALOGUE OF HIV-1 PROTEASE CORRESPONDING TO THE RESIDUES 491-589 OF UNP ENTRY P03369. THE REGION 1-99 OF THE FIRST HALF AND 105-203 OF THE SECOND HALF SHARE THE SAME SEQUENCE EXCEPT FOR THE 51ST RESIDUE, WHICH IS L-ALA(ALA51) IN REGION 1-99 AND D-ALA (DAL155) IN REGION 105-203. THERE IS A SHORT LINKER REGION (RESIDUES 100-104). THE TWO REGIONS (HALVES) ARE RELATED BY INTRA-MOLECULAR PSEUDO-2-FOLD SYMMETRY, I.E. REGIONS 1-99 AND 105-203 HAVE SIMILAR STRUCTURES BUT DO NOT SUPERIMPOSE COMPLETELY. MOREOVER, THERE IS A DISORDER WITH RESPECT TO THE NON-CRYSTALLOGRAPHIC PSEUDO-2-FOLD SYMMETRY AXIS OF THE COVELENT DIMER HIV-1 PROTEASE. SUCH CONCLUSION IS BASED ON THE SPLIT OF THE DENSITY AT THE BETA-TURN REGIONS FOR RESIDUES 49-52 AND 153-156, ALTHOUGH THE IS NO DENSITY SPLIT BETWEEN TWO CONFORMERS FOR MOST OF THE ATOMS. TO ACCOUNT FOR SUCH DISORDER, CHAINS A AND B, EACH REPRESENTING THE SAME 203-AMINO ACID RESIDUE COVALENT DIMER HIV-1 PROTEASE WERE INTRODUCED IN THE STRUCTURE SOLUTION. SO WERE CHAINS C AND D FOR THE PEPTIDOMIMETIC JG-365 INHIBITOR, WHERE CHAIN C OF INHIBITOR CORRESPONDS TO THE MODEL A OF THE COVELENT DIMER HIV-1 PROTEASE AND CHAIN D CORRESPONDS TO MODEL B. THESE TWO MODELS, OR TWO CONFORMATIONS OF ONE POLYMER CHAIN ARE RELATED TO EACH OTHER BY PSEUDO-2-FOLD SYMMETRY. THE OCCUPANCIES WERE DETERMINED TO BE 0.65 FOR CHAINS A AND C AND 0.35 FOR CHAINS B AND D, RESPECTIVELY. ; _pdbx_entry_details.compound_details 'SEE REMARK 999' _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ILE _pdbx_validate_close_contact.auth_seq_id_1 50 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 263 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.88 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PHE B 99 ? B YCM B 100 ? B -131.62 2 1 JG3 C 5 ? A ILE C 6 ? A -110.06 3 1 JG3 D 5 ? B ILE D 6 ? B -112.26 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 JG3 C 5 ? A 34.72 2 1 JG3 D 5 ? B 33.37 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ABA N N N N 1 ABA CA C N S 2 ABA C C N N 3 ABA O O N N 4 ABA CB C N N 5 ABA CG C N N 6 ABA OXT O N N 7 ABA H H N N 8 ABA H2 H N N 9 ABA HA H N N 10 ABA HB3 H N N 11 ABA HB2 H N N 12 ABA HG1 H N N 13 ABA HG3 H N N 14 ABA HG2 H N N 15 ABA HXT H N N 16 ACE C C N N 17 ACE O O N N 18 ACE CH3 C N N 19 ACE H H N N 20 ACE H1 H N N 21 ACE H2 H N N 22 ACE H3 H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 CYS N N N N 97 CYS CA C N R 98 CYS C C N N 99 CYS O O N N 100 CYS CB C N N 101 CYS SG S N N 102 CYS OXT O N N 103 CYS H H N N 104 CYS H2 H N N 105 CYS HA H N N 106 CYS HB2 H N N 107 CYS HB3 H N N 108 CYS HG H N N 109 CYS HXT H N N 110 DAL N N N N 111 DAL CA C N R 112 DAL CB C N N 113 DAL C C N N 114 DAL O O N N 115 DAL OXT O N N 116 DAL H H N N 117 DAL H2 H N N 118 DAL HA H N N 119 DAL HB1 H N N 120 DAL HB2 H N N 121 DAL HB3 H N N 122 DAL HXT H N N 123 GLN N N N N 124 GLN CA C N S 125 GLN C C N N 126 GLN O O N N 127 GLN CB C N N 128 GLN CG C N N 129 GLN CD C N N 130 GLN OE1 O N N 131 GLN NE2 N N N 132 GLN OXT O N N 133 GLN H H N N 134 GLN H2 H N N 135 GLN HA H N N 136 GLN HB2 H N N 137 GLN HB3 H N N 138 GLN HG2 H N N 139 GLN HG3 H N N 140 GLN HE21 H N N 141 GLN HE22 H N N 142 GLN HXT H N N 143 GLU N N N N 144 GLU CA C N S 145 GLU C C N N 146 GLU O O N N 147 GLU CB C N N 148 GLU CG C N N 149 GLU CD C N N 150 GLU OE1 O N N 151 GLU OE2 O N N 152 GLU OXT O N N 153 GLU H H N N 154 GLU H2 H N N 155 GLU HA H N N 156 GLU HB2 H N N 157 GLU HB3 H N N 158 GLU HG2 H N N 159 GLU HG3 H N N 160 GLU HE2 H N N 161 GLU HXT H N N 162 GLY N N N N 163 GLY CA C N N 164 GLY C C N N 165 GLY O O N N 166 GLY OXT O N N 167 GLY H H N N 168 GLY H2 H N N 169 GLY HA2 H N N 170 GLY HA3 H N N 171 GLY HXT H N N 172 HIS N N N N 173 HIS CA C N S 174 HIS C C N N 175 HIS O O N N 176 HIS CB C N N 177 HIS CG C Y N 178 HIS ND1 N Y N 179 HIS CD2 C Y N 180 HIS CE1 C Y N 181 HIS NE2 N Y N 182 HIS OXT O N N 183 HIS H H N N 184 HIS H2 H N N 185 HIS HA H N N 186 HIS HB2 H N N 187 HIS HB3 H N N 188 HIS HD1 H N N 189 HIS HD2 H N N 190 HIS HE1 H N N 191 HIS HE2 H N N 192 HIS HXT H N N 193 HOH O O N N 194 HOH H1 H N N 195 HOH H2 H N N 196 ILE N N N N 197 ILE CA C N S 198 ILE C C N N 199 ILE O O N N 200 ILE CB C N S 201 ILE CG1 C N N 202 ILE CG2 C N N 203 ILE CD1 C N N 204 ILE OXT O N N 205 ILE H H N N 206 ILE H2 H N N 207 ILE HA H N N 208 ILE HB H N N 209 ILE HG12 H N N 210 ILE HG13 H N N 211 ILE HG21 H N N 212 ILE HG22 H N N 213 ILE HG23 H N N 214 ILE HD11 H N N 215 ILE HD12 H N N 216 ILE HD13 H N N 217 ILE HXT H N N 218 JG3 C1 C N S 219 JG3 N N N N 220 JG3 O1 O N N 221 JG3 C C N N 222 JG3 N2 N N N 223 JG3 O O N N 224 JG3 C3 C N N 225 JG3 C4 C N N 226 JG3 C5 C Y N 227 JG3 C6 C Y N 228 JG3 C7 C Y N 229 JG3 CA C N S 230 JG3 C8 C N S 231 JG3 C10 C N N 232 JG3 C11 C N N 233 JG3 C12 C Y N 234 JG3 C13 C Y N 235 JG3 C14 C Y N 236 JG3 C15 C N N 237 JG3 H1 H N N 238 JG3 H H N N 239 JG3 H3 H N N 240 JG3 H4 H N N 241 JG3 H5 H N N 242 JG3 H6 H N N 243 JG3 H7 H N N 244 JG3 H8 H N N 245 JG3 H9 H N N 246 JG3 H10 H N N 247 JG3 HA H N N 248 JG3 H12 H N N 249 JG3 H13 H N N 250 JG3 H14 H N N 251 JG3 H15 H N N 252 JG3 H16 H N N 253 JG3 H17 H N N 254 JG3 H18 H N N 255 JG3 H19 H N N 256 JG3 H20 H N N 257 JG3 H2 H N N 258 JG3 OXT O N N 259 JG3 HXT H N N 260 LEU N N N N 261 LEU CA C N S 262 LEU C C N N 263 LEU O O N N 264 LEU CB C N N 265 LEU CG C N N 266 LEU CD1 C N N 267 LEU CD2 C N N 268 LEU OXT O N N 269 LEU H H N N 270 LEU H2 H N N 271 LEU HA H N N 272 LEU HB2 H N N 273 LEU HB3 H N N 274 LEU HG H N N 275 LEU HD11 H N N 276 LEU HD12 H N N 277 LEU HD13 H N N 278 LEU HD21 H N N 279 LEU HD22 H N N 280 LEU HD23 H N N 281 LEU HXT H N N 282 LYS N N N N 283 LYS CA C N S 284 LYS C C N N 285 LYS O O N N 286 LYS CB C N N 287 LYS CG C N N 288 LYS CD C N N 289 LYS CE C N N 290 LYS NZ N N N 291 LYS OXT O N N 292 LYS H H N N 293 LYS H2 H N N 294 LYS HA H N N 295 LYS HB2 H N N 296 LYS HB3 H N N 297 LYS HG2 H N N 298 LYS HG3 H N N 299 LYS HD2 H N N 300 LYS HD3 H N N 301 LYS HE2 H N N 302 LYS HE3 H N N 303 LYS HZ1 H N N 304 LYS HZ2 H N N 305 LYS HZ3 H N N 306 LYS HXT H N N 307 MET N N N N 308 MET CA C N S 309 MET C C N N 310 MET O O N N 311 MET CB C N N 312 MET CG C N N 313 MET SD S N N 314 MET CE C N N 315 MET OXT O N N 316 MET H H N N 317 MET H2 H N N 318 MET HA H N N 319 MET HB2 H N N 320 MET HB3 H N N 321 MET HG2 H N N 322 MET HG3 H N N 323 MET HE1 H N N 324 MET HE2 H N N 325 MET HE3 H N N 326 MET HXT H N N 327 NLE N N N N 328 NLE CA C N S 329 NLE C C N N 330 NLE O O N N 331 NLE OXT O N N 332 NLE CB C N N 333 NLE CG C N N 334 NLE CD C N N 335 NLE CE C N N 336 NLE H H N N 337 NLE H2 H N N 338 NLE HA H N N 339 NLE HXT H N N 340 NLE HB2 H N N 341 NLE HB3 H N N 342 NLE HG2 H N N 343 NLE HG3 H N N 344 NLE HD2 H N N 345 NLE HD3 H N N 346 NLE HE1 H N N 347 NLE HE2 H N N 348 NLE HE3 H N N 349 PHE N N N N 350 PHE CA C N S 351 PHE C C N N 352 PHE O O N N 353 PHE CB C N N 354 PHE CG C Y N 355 PHE CD1 C Y N 356 PHE CD2 C Y N 357 PHE CE1 C Y N 358 PHE CE2 C Y N 359 PHE CZ C Y N 360 PHE OXT O N N 361 PHE H H N N 362 PHE H2 H N N 363 PHE HA H N N 364 PHE HB2 H N N 365 PHE HB3 H N N 366 PHE HD1 H N N 367 PHE HD2 H N N 368 PHE HE1 H N N 369 PHE HE2 H N N 370 PHE HZ H N N 371 PHE HXT H N N 372 PRO N N N N 373 PRO CA C N S 374 PRO C C N N 375 PRO O O N N 376 PRO CB C N N 377 PRO CG C N N 378 PRO CD C N N 379 PRO OXT O N N 380 PRO H H N N 381 PRO HA H N N 382 PRO HB2 H N N 383 PRO HB3 H N N 384 PRO HG2 H N N 385 PRO HG3 H N N 386 PRO HD2 H N N 387 PRO HD3 H N N 388 PRO HXT H N N 389 SER N N N N 390 SER CA C N S 391 SER C C N N 392 SER O O N N 393 SER CB C N N 394 SER OG O N N 395 SER OXT O N N 396 SER H H N N 397 SER H2 H N N 398 SER HA H N N 399 SER HB2 H N N 400 SER HB3 H N N 401 SER HG H N N 402 SER HXT H N N 403 THR N N N N 404 THR CA C N S 405 THR C C N N 406 THR O O N N 407 THR CB C N R 408 THR OG1 O N N 409 THR CG2 C N N 410 THR OXT O N N 411 THR H H N N 412 THR H2 H N N 413 THR HA H N N 414 THR HB H N N 415 THR HG1 H N N 416 THR HG21 H N N 417 THR HG22 H N N 418 THR HG23 H N N 419 THR HXT H N N 420 TRP N N N N 421 TRP CA C N S 422 TRP C C N N 423 TRP O O N N 424 TRP CB C N N 425 TRP CG C Y N 426 TRP CD1 C Y N 427 TRP CD2 C Y N 428 TRP NE1 N Y N 429 TRP CE2 C Y N 430 TRP CE3 C Y N 431 TRP CZ2 C Y N 432 TRP CZ3 C Y N 433 TRP CH2 C Y N 434 TRP OXT O N N 435 TRP H H N N 436 TRP H2 H N N 437 TRP HA H N N 438 TRP HB2 H N N 439 TRP HB3 H N N 440 TRP HD1 H N N 441 TRP HE1 H N N 442 TRP HE3 H N N 443 TRP HZ2 H N N 444 TRP HZ3 H N N 445 TRP HH2 H N N 446 TRP HXT H N N 447 TYR N N N N 448 TYR CA C N S 449 TYR C C N N 450 TYR O O N N 451 TYR CB C N N 452 TYR CG C Y N 453 TYR CD1 C Y N 454 TYR CD2 C Y N 455 TYR CE1 C Y N 456 TYR CE2 C Y N 457 TYR CZ C Y N 458 TYR OH O N N 459 TYR OXT O N N 460 TYR H H N N 461 TYR H2 H N N 462 TYR HA H N N 463 TYR HB2 H N N 464 TYR HB3 H N N 465 TYR HD1 H N N 466 TYR HD2 H N N 467 TYR HE1 H N N 468 TYR HE2 H N N 469 TYR HH H N N 470 TYR HXT H N N 471 VAL N N N N 472 VAL CA C N S 473 VAL C C N N 474 VAL O O N N 475 VAL CB C N N 476 VAL CG1 C N N 477 VAL CG2 C N N 478 VAL OXT O N N 479 VAL H H N N 480 VAL H2 H N N 481 VAL HA H N N 482 VAL HB H N N 483 VAL HG11 H N N 484 VAL HG12 H N N 485 VAL HG13 H N N 486 VAL HG21 H N N 487 VAL HG22 H N N 488 VAL HG23 H N N 489 VAL HXT H N N 490 VME N N N N 491 VME CA C N S 492 VME C C N N 493 VME O O N N 494 VME CB C N N 495 VME CG1 C N N 496 VME CG2 C N N 497 VME CM C N N 498 VME OXT O N N 499 VME H H N N 500 VME H2 H N N 501 VME HA H N N 502 VME HB H N N 503 VME HG11 H N N 504 VME HG12 H N N 505 VME HG13 H N N 506 VME HG21 H N N 507 VME HG22 H N N 508 VME HG23 H N N 509 VME HMC1 H N N 510 VME HMC2 H N N 511 VME HMC3 H N N 512 YCM N N N N 513 YCM CA C N R 514 YCM CB C N N 515 YCM SG S N N 516 YCM CD C N N 517 YCM CE C N N 518 YCM OZ1 O N N 519 YCM NZ2 N N N 520 YCM C C N N 521 YCM O O N N 522 YCM OXT O N N 523 YCM H H N N 524 YCM H2 H N N 525 YCM HA H N N 526 YCM HB2 H N N 527 YCM HB3 H N N 528 YCM HD2 H N N 529 YCM HD3 H N N 530 YCM HZ21 H N N 531 YCM HZ22 H N N 532 YCM HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ABA N CA sing N N 1 ABA N H sing N N 2 ABA N H2 sing N N 3 ABA CA C sing N N 4 ABA CA CB sing N N 5 ABA CA HA sing N N 6 ABA C O doub N N 7 ABA C OXT sing N N 8 ABA CB CG sing N N 9 ABA CB HB3 sing N N 10 ABA CB HB2 sing N N 11 ABA CG HG1 sing N N 12 ABA CG HG3 sing N N 13 ABA CG HG2 sing N N 14 ABA OXT HXT sing N N 15 ACE C O doub N N 16 ACE C CH3 sing N N 17 ACE C H sing N N 18 ACE CH3 H1 sing N N 19 ACE CH3 H2 sing N N 20 ACE CH3 H3 sing N N 21 ALA N CA sing N N 22 ALA N H sing N N 23 ALA N H2 sing N N 24 ALA CA C sing N N 25 ALA CA CB sing N N 26 ALA CA HA sing N N 27 ALA C O doub N N 28 ALA C OXT sing N N 29 ALA CB HB1 sing N N 30 ALA CB HB2 sing N N 31 ALA CB HB3 sing N N 32 ALA OXT HXT sing N N 33 ARG N CA sing N N 34 ARG N H sing N N 35 ARG N H2 sing N N 36 ARG CA C sing N N 37 ARG CA CB sing N N 38 ARG CA HA sing N N 39 ARG C O doub N N 40 ARG C OXT sing N N 41 ARG CB CG sing N N 42 ARG CB HB2 sing N N 43 ARG CB HB3 sing N N 44 ARG CG CD sing N N 45 ARG CG HG2 sing N N 46 ARG CG HG3 sing N N 47 ARG CD NE sing N N 48 ARG CD HD2 sing N N 49 ARG CD HD3 sing N N 50 ARG NE CZ sing N N 51 ARG NE HE sing N N 52 ARG CZ NH1 sing N N 53 ARG CZ NH2 doub N N 54 ARG NH1 HH11 sing N N 55 ARG NH1 HH12 sing N N 56 ARG NH2 HH21 sing N N 57 ARG NH2 HH22 sing N N 58 ARG OXT HXT sing N N 59 ASN N CA sing N N 60 ASN N H sing N N 61 ASN N H2 sing N N 62 ASN CA C sing N N 63 ASN CA CB sing N N 64 ASN CA HA sing N N 65 ASN C O doub N N 66 ASN C OXT sing N N 67 ASN CB CG sing N N 68 ASN CB HB2 sing N N 69 ASN CB HB3 sing N N 70 ASN CG OD1 doub N N 71 ASN CG ND2 sing N N 72 ASN ND2 HD21 sing N N 73 ASN ND2 HD22 sing N N 74 ASN OXT HXT sing N N 75 ASP N CA sing N N 76 ASP N H sing N N 77 ASP N H2 sing N N 78 ASP CA C sing N N 79 ASP CA CB sing N N 80 ASP CA HA sing N N 81 ASP C O doub N N 82 ASP C OXT sing N N 83 ASP CB CG sing N N 84 ASP CB HB2 sing N N 85 ASP CB HB3 sing N N 86 ASP CG OD1 doub N N 87 ASP CG OD2 sing N N 88 ASP OD2 HD2 sing N N 89 ASP OXT HXT sing N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 DAL N CA sing N N 104 DAL N H sing N N 105 DAL N H2 sing N N 106 DAL CA CB sing N N 107 DAL CA C sing N N 108 DAL CA HA sing N N 109 DAL CB HB1 sing N N 110 DAL CB HB2 sing N N 111 DAL CB HB3 sing N N 112 DAL C O doub N N 113 DAL C OXT sing N N 114 DAL OXT HXT sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 JG3 C1 O1 sing N N 206 JG3 C1 H1 sing N N 207 JG3 N CA sing N N 208 JG3 N H sing N N 209 JG3 O1 H3 sing N N 210 JG3 C C8 sing N N 211 JG3 N2 C8 sing N N 212 JG3 O C doub N N 213 JG3 C3 N2 sing N N 214 JG3 C3 C15 sing N N 215 JG3 C3 H4 sing N N 216 JG3 C3 H5 sing N N 217 JG3 C4 C1 sing N N 218 JG3 C4 N2 sing N N 219 JG3 C4 H6 sing N N 220 JG3 C4 H7 sing N N 221 JG3 C5 C12 doub Y N 222 JG3 C5 C13 sing Y N 223 JG3 C5 H8 sing N N 224 JG3 C6 C14 doub Y N 225 JG3 C6 H9 sing N N 226 JG3 C7 C14 sing Y N 227 JG3 C7 H10 sing N N 228 JG3 CA C1 sing N N 229 JG3 CA C10 sing N N 230 JG3 CA HA sing N N 231 JG3 C8 C11 sing N N 232 JG3 C8 H12 sing N N 233 JG3 C10 H13 sing N N 234 JG3 C10 H14 sing N N 235 JG3 C11 H15 sing N N 236 JG3 C11 H16 sing N N 237 JG3 C12 C6 sing Y N 238 JG3 C12 H17 sing N N 239 JG3 C13 C7 doub Y N 240 JG3 C13 H18 sing N N 241 JG3 C14 C10 sing N N 242 JG3 C15 C11 sing N N 243 JG3 C15 H19 sing N N 244 JG3 C15 H20 sing N N 245 JG3 N H2 sing N N 246 JG3 C OXT sing N N 247 JG3 OXT HXT sing N N 248 LEU N CA sing N N 249 LEU N H sing N N 250 LEU N H2 sing N N 251 LEU CA C sing N N 252 LEU CA CB sing N N 253 LEU CA HA sing N N 254 LEU C O doub N N 255 LEU C OXT sing N N 256 LEU CB CG sing N N 257 LEU CB HB2 sing N N 258 LEU CB HB3 sing N N 259 LEU CG CD1 sing N N 260 LEU CG CD2 sing N N 261 LEU CG HG sing N N 262 LEU CD1 HD11 sing N N 263 LEU CD1 HD12 sing N N 264 LEU CD1 HD13 sing N N 265 LEU CD2 HD21 sing N N 266 LEU CD2 HD22 sing N N 267 LEU CD2 HD23 sing N N 268 LEU OXT HXT sing N N 269 LYS N CA sing N N 270 LYS N H sing N N 271 LYS N H2 sing N N 272 LYS CA C sing N N 273 LYS CA CB sing N N 274 LYS CA HA sing N N 275 LYS C O doub N N 276 LYS C OXT sing N N 277 LYS CB CG sing N N 278 LYS CB HB2 sing N N 279 LYS CB HB3 sing N N 280 LYS CG CD sing N N 281 LYS CG HG2 sing N N 282 LYS CG HG3 sing N N 283 LYS CD CE sing N N 284 LYS CD HD2 sing N N 285 LYS CD HD3 sing N N 286 LYS CE NZ sing N N 287 LYS CE HE2 sing N N 288 LYS CE HE3 sing N N 289 LYS NZ HZ1 sing N N 290 LYS NZ HZ2 sing N N 291 LYS NZ HZ3 sing N N 292 LYS OXT HXT sing N N 293 MET N CA sing N N 294 MET N H sing N N 295 MET N H2 sing N N 296 MET CA C sing N N 297 MET CA CB sing N N 298 MET CA HA sing N N 299 MET C O doub N N 300 MET C OXT sing N N 301 MET CB CG sing N N 302 MET CB HB2 sing N N 303 MET CB HB3 sing N N 304 MET CG SD sing N N 305 MET CG HG2 sing N N 306 MET CG HG3 sing N N 307 MET SD CE sing N N 308 MET CE HE1 sing N N 309 MET CE HE2 sing N N 310 MET CE HE3 sing N N 311 MET OXT HXT sing N N 312 NLE N CA sing N N 313 NLE N H sing N N 314 NLE N H2 sing N N 315 NLE CA C sing N N 316 NLE CA CB sing N N 317 NLE CA HA sing N N 318 NLE C O doub N N 319 NLE C OXT sing N N 320 NLE OXT HXT sing N N 321 NLE CB CG sing N N 322 NLE CB HB2 sing N N 323 NLE CB HB3 sing N N 324 NLE CG CD sing N N 325 NLE CG HG2 sing N N 326 NLE CG HG3 sing N N 327 NLE CD CE sing N N 328 NLE CD HD2 sing N N 329 NLE CD HD3 sing N N 330 NLE CE HE1 sing N N 331 NLE CE HE2 sing N N 332 NLE CE HE3 sing N N 333 PHE N CA sing N N 334 PHE N H sing N N 335 PHE N H2 sing N N 336 PHE CA C sing N N 337 PHE CA CB sing N N 338 PHE CA HA sing N N 339 PHE C O doub N N 340 PHE C OXT sing N N 341 PHE CB CG sing N N 342 PHE CB HB2 sing N N 343 PHE CB HB3 sing N N 344 PHE CG CD1 doub Y N 345 PHE CG CD2 sing Y N 346 PHE CD1 CE1 sing Y N 347 PHE CD1 HD1 sing N N 348 PHE CD2 CE2 doub Y N 349 PHE CD2 HD2 sing N N 350 PHE CE1 CZ doub Y N 351 PHE CE1 HE1 sing N N 352 PHE CE2 CZ sing Y N 353 PHE CE2 HE2 sing N N 354 PHE CZ HZ sing N N 355 PHE OXT HXT sing N N 356 PRO N CA sing N N 357 PRO N CD sing N N 358 PRO N H sing N N 359 PRO CA C sing N N 360 PRO CA CB sing N N 361 PRO CA HA sing N N 362 PRO C O doub N N 363 PRO C OXT sing N N 364 PRO CB CG sing N N 365 PRO CB HB2 sing N N 366 PRO CB HB3 sing N N 367 PRO CG CD sing N N 368 PRO CG HG2 sing N N 369 PRO CG HG3 sing N N 370 PRO CD HD2 sing N N 371 PRO CD HD3 sing N N 372 PRO OXT HXT sing N N 373 SER N CA sing N N 374 SER N H sing N N 375 SER N H2 sing N N 376 SER CA C sing N N 377 SER CA CB sing N N 378 SER CA HA sing N N 379 SER C O doub N N 380 SER C OXT sing N N 381 SER CB OG sing N N 382 SER CB HB2 sing N N 383 SER CB HB3 sing N N 384 SER OG HG sing N N 385 SER OXT HXT sing N N 386 THR N CA sing N N 387 THR N H sing N N 388 THR N H2 sing N N 389 THR CA C sing N N 390 THR CA CB sing N N 391 THR CA HA sing N N 392 THR C O doub N N 393 THR C OXT sing N N 394 THR CB OG1 sing N N 395 THR CB CG2 sing N N 396 THR CB HB sing N N 397 THR OG1 HG1 sing N N 398 THR CG2 HG21 sing N N 399 THR CG2 HG22 sing N N 400 THR CG2 HG23 sing N N 401 THR OXT HXT sing N N 402 TRP N CA sing N N 403 TRP N H sing N N 404 TRP N H2 sing N N 405 TRP CA C sing N N 406 TRP CA CB sing N N 407 TRP CA HA sing N N 408 TRP C O doub N N 409 TRP C OXT sing N N 410 TRP CB CG sing N N 411 TRP CB HB2 sing N N 412 TRP CB HB3 sing N N 413 TRP CG CD1 doub Y N 414 TRP CG CD2 sing Y N 415 TRP CD1 NE1 sing Y N 416 TRP CD1 HD1 sing N N 417 TRP CD2 CE2 doub Y N 418 TRP CD2 CE3 sing Y N 419 TRP NE1 CE2 sing Y N 420 TRP NE1 HE1 sing N N 421 TRP CE2 CZ2 sing Y N 422 TRP CE3 CZ3 doub Y N 423 TRP CE3 HE3 sing N N 424 TRP CZ2 CH2 doub Y N 425 TRP CZ2 HZ2 sing N N 426 TRP CZ3 CH2 sing Y N 427 TRP CZ3 HZ3 sing N N 428 TRP CH2 HH2 sing N N 429 TRP OXT HXT sing N N 430 TYR N CA sing N N 431 TYR N H sing N N 432 TYR N H2 sing N N 433 TYR CA C sing N N 434 TYR CA CB sing N N 435 TYR CA HA sing N N 436 TYR C O doub N N 437 TYR C OXT sing N N 438 TYR CB CG sing N N 439 TYR CB HB2 sing N N 440 TYR CB HB3 sing N N 441 TYR CG CD1 doub Y N 442 TYR CG CD2 sing Y N 443 TYR CD1 CE1 sing Y N 444 TYR CD1 HD1 sing N N 445 TYR CD2 CE2 doub Y N 446 TYR CD2 HD2 sing N N 447 TYR CE1 CZ doub Y N 448 TYR CE1 HE1 sing N N 449 TYR CE2 CZ sing Y N 450 TYR CE2 HE2 sing N N 451 TYR CZ OH sing N N 452 TYR OH HH sing N N 453 TYR OXT HXT sing N N 454 VAL N CA sing N N 455 VAL N H sing N N 456 VAL N H2 sing N N 457 VAL CA C sing N N 458 VAL CA CB sing N N 459 VAL CA HA sing N N 460 VAL C O doub N N 461 VAL C OXT sing N N 462 VAL CB CG1 sing N N 463 VAL CB CG2 sing N N 464 VAL CB HB sing N N 465 VAL CG1 HG11 sing N N 466 VAL CG1 HG12 sing N N 467 VAL CG1 HG13 sing N N 468 VAL CG2 HG21 sing N N 469 VAL CG2 HG22 sing N N 470 VAL CG2 HG23 sing N N 471 VAL OXT HXT sing N N 472 VME N CA sing N N 473 VME N H sing N N 474 VME N H2 sing N N 475 VME CA C sing N N 476 VME CA CB sing N N 477 VME CA HA sing N N 478 VME C O doub N N 479 VME C OXT sing N N 480 VME CB CG1 sing N N 481 VME CB CG2 sing N N 482 VME CB HB sing N N 483 VME CG1 HG11 sing N N 484 VME CG1 HG12 sing N N 485 VME CG1 HG13 sing N N 486 VME CG2 HG21 sing N N 487 VME CG2 HG22 sing N N 488 VME CG2 HG23 sing N N 489 VME CM OXT sing N N 490 VME CM HMC1 sing N N 491 VME CM HMC2 sing N N 492 VME CM HMC3 sing N N 493 YCM N CA sing N N 494 YCM N H sing N N 495 YCM N H2 sing N N 496 YCM CA CB sing N N 497 YCM CA C sing N N 498 YCM CA HA sing N N 499 YCM CB SG sing N N 500 YCM CB HB2 sing N N 501 YCM CB HB3 sing N N 502 YCM SG CD sing N N 503 YCM CD CE sing N N 504 YCM CD HD2 sing N N 505 YCM CD HD3 sing N N 506 YCM CE OZ1 doub N N 507 YCM CE NZ2 sing N N 508 YCM NZ2 HZ21 sing N N 509 YCM NZ2 HZ22 sing N N 510 YCM C O doub N N 511 YCM C OXT sing N N 512 YCM OXT HXT sing N N 513 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3FSM _pdbx_initial_refinement_model.details 'PDB entry 3FSM' #