HEADER TRANSPORT PROTEIN 07-MAR-09 3GJ0 TITLE CRYSTAL STRUCTURE OF HUMAN RANGDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING NUCLEAR PROTEIN RAN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GTPASE RAN, RAS-RELATED NUCLEAR PROTEIN, RAS-LIKE PROTEIN COMPND 5 TC4, ANDROGEN RECEPTOR-ASSOCIATED PROTEIN 24; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARA24, OK/SW-CL.81, RAN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS G PROTEIN, GDP, ACETYLATION, CYTOPLASM, GTP-BINDING, HOST-VIRUS KEYWDS 2 INTERACTION, NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN, KEYWDS 3 POLYMORPHISM, PROTEIN TRANSPORT, TRANSPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.R.PARTRIDGE,T.U.SCHWARTZ REVDAT 2 06-SEP-23 3GJ0 1 REMARK SEQADV LINK REVDAT 1 04-AUG-09 3GJ0 0 JRNL AUTH J.R.PARTRIDGE,T.U.SCHWARTZ JRNL TITL CRYSTALLOGRAPHIC AND BIOCHEMICAL ANALYSIS OF THE RAN-BINDING JRNL TITL 2 ZINC FINGER DOMAIN. JRNL REF J.MOL.BIOL. V. 391 375 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19505478 JRNL DOI 10.1016/J.JMB.2009.06.011 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 70432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3552 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.2355 - 4.3245 0.90 2768 135 0.1780 0.1826 REMARK 3 2 4.3245 - 3.4329 0.93 2727 140 0.1506 0.1583 REMARK 3 3 3.4329 - 2.9991 0.94 2703 166 0.1627 0.1872 REMARK 3 4 2.9991 - 2.7249 0.96 2704 150 0.1807 0.2072 REMARK 3 5 2.7249 - 2.5296 0.96 2737 145 0.1772 0.1921 REMARK 3 6 2.5296 - 2.3805 0.96 2713 167 0.1795 0.2117 REMARK 3 7 2.3805 - 2.2613 0.96 2671 152 0.1714 0.2238 REMARK 3 8 2.2613 - 2.1629 0.96 2732 132 0.1852 0.2023 REMARK 3 9 2.1629 - 2.0796 0.97 2675 164 0.1660 0.1859 REMARK 3 10 2.0796 - 2.0078 0.97 2729 136 0.1649 0.1688 REMARK 3 11 2.0078 - 1.9451 0.96 2667 162 0.1788 0.2007 REMARK 3 12 1.9451 - 1.8895 0.97 2685 150 0.1779 0.1998 REMARK 3 13 1.8895 - 1.8397 0.95 2659 130 0.2066 0.2340 REMARK 3 14 1.8397 - 1.7948 0.97 2699 141 0.1771 0.1935 REMARK 3 15 1.7948 - 1.7540 0.96 2684 137 0.1762 0.2180 REMARK 3 16 1.7540 - 1.7167 0.96 2682 144 0.1712 0.2250 REMARK 3 17 1.7167 - 1.6824 0.96 2681 130 0.1756 0.2119 REMARK 3 18 1.6824 - 1.6506 0.96 2652 148 0.1776 0.2316 REMARK 3 19 1.6506 - 1.6211 0.96 2656 133 0.1766 0.2166 REMARK 3 20 1.6211 - 1.5936 0.95 2655 136 0.1918 0.2260 REMARK 3 21 1.5936 - 1.5679 0.95 2621 138 0.2005 0.2436 REMARK 3 22 1.5679 - 1.5438 0.95 2658 139 0.2027 0.2494 REMARK 3 23 1.5438 - 1.5211 0.95 2617 140 0.2182 0.2222 REMARK 3 24 1.5211 - 1.4997 0.93 2607 110 0.2331 0.2625 REMARK 3 25 1.4997 - 1.4800 0.91 2498 127 0.2507 0.2565 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 53.54 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3345 REMARK 3 ANGLE : 1.244 4547 REMARK 3 CHIRALITY : 0.081 500 REMARK 3 PLANARITY : 0.005 571 REMARK 3 DIHEDRAL : 15.899 1216 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 14.0030 38.6393 -14.2278 REMARK 3 T TENSOR REMARK 3 T11: 0.1109 T22: 0.0926 REMARK 3 T33: 0.1071 T12: -0.0052 REMARK 3 T13: 0.0003 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.0729 L22: 0.8808 REMARK 3 L33: 0.7160 L12: 0.2383 REMARK 3 L13: 0.0951 L23: -0.0201 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: 0.0049 S13: -0.0572 REMARK 3 S21: 0.0163 S22: -0.0392 S23: 0.0617 REMARK 3 S31: -0.0448 S32: -0.0255 S33: 0.0056 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GJ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051920. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70774 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 32.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1BYU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.5, 18-20% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.28350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 40.77200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 40.77200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.64175 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 40.77200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 40.77200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.92525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 40.77200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.77200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.64175 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 40.77200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.77200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 97.92525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.28350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 494 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 208 REMARK 465 LEU A 209 REMARK 465 PRO A 210 REMARK 465 ASP A 211 REMARK 465 GLU A 212 REMARK 465 ASP A 213 REMARK 465 ASP A 214 REMARK 465 ASP A 215 REMARK 465 LEU A 216 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 GLN B 4 REMARK 465 GLY B 5 REMARK 465 GLU B 6 REMARK 465 PRO B 7 REMARK 465 GLN B 69 REMARK 465 GLU B 70 REMARK 465 LYS B 71 REMARK 465 PHE B 72 REMARK 465 GLY B 73 REMARK 465 GLY B 74 REMARK 465 THR B 207 REMARK 465 ALA B 208 REMARK 465 LEU B 209 REMARK 465 PRO B 210 REMARK 465 ASP B 211 REMARK 465 GLU B 212 REMARK 465 ASP B 213 REMARK 465 ASP B 214 REMARK 465 ASP B 215 REMARK 465 LEU B 216 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 24 OG1 REMARK 620 2 HOH A 218 O 92.7 REMARK 620 3 HOH A 220 O 175.8 91.2 REMARK 620 4 HOH A 228 O 87.3 87.6 91.2 REMARK 620 5 HOH A 233 O 85.9 177.2 90.1 89.9 REMARK 620 6 GDP A 302 O1B 91.8 87.3 90.0 174.8 95.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 24 OG1 REMARK 620 2 GDP B 217 O1B 91.4 REMARK 620 3 HOH B 219 O 83.0 172.8 REMARK 620 4 HOH B 221 O 85.0 97.5 86.5 REMARK 620 5 HOH B 222 O 173.3 94.0 91.9 90.4 REMARK 620 6 HOH B 223 O 88.9 90.5 84.9 170.1 94.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 217 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CH5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RANGDP-NUP153ZNF2 COMPLEX REMARK 900 RELATED ID: 2GQE RELATED DB: PDB REMARK 900 MOLECULAR CHARACTERIZATION OF THE RAN BINDING ZINC FINGER DOMAIN REMARK 900 RELATED ID: 1BYU RELATED DB: PDB REMARK 900 CANINE GDP-RAN REMARK 900 RELATED ID: 3GJ3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN IN COMPLEX WITH NUP153 - REMARK 900 ZINC FINGER MODULE 2 REMARK 900 RELATED ID: 3GJ4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 3 REMARK 900 RELATED ID: 3GJ5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 4 REMARK 900 RELATED ID: 3GJ6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 1 REMARK 900 RELATED ID: 3GJ7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 12 REMARK 900 RELATED ID: 3GJ8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN NUCLEOPORIN F35S MUTANT IN COMPLEX WITH REMARK 900 NUP153 - ZINC FINGER MODULE 34 DBREF 3GJ0 A 2 216 UNP P62826 RAN_HUMAN 2 216 DBREF 3GJ0 B 2 216 UNP P62826 RAN_HUMAN 2 216 SEQADV 3GJ0 GLY A -4 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 PRO A -3 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 HIS A -2 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 MET A -1 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 ALA A 0 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 SER A 1 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 GLY B -4 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 PRO B -3 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 HIS B -2 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 MET B -1 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 ALA B 0 UNP P62826 EXPRESSION TAG SEQADV 3GJ0 SER B 1 UNP P62826 EXPRESSION TAG SEQRES 1 A 221 GLY PRO HIS MET ALA SER ALA ALA GLN GLY GLU PRO GLN SEQRES 2 A 221 VAL GLN PHE LYS LEU VAL LEU VAL GLY ASP GLY GLY THR SEQRES 3 A 221 GLY LYS THR THR PHE VAL LYS ARG HIS LEU THR GLY GLU SEQRES 4 A 221 PHE GLU LYS LYS TYR VAL ALA THR LEU GLY VAL GLU VAL SEQRES 5 A 221 HIS PRO LEU VAL PHE HIS THR ASN ARG GLY PRO ILE LYS SEQRES 6 A 221 PHE ASN VAL TRP ASP THR ALA GLY GLN GLU LYS PHE GLY SEQRES 7 A 221 GLY LEU ARG ASP GLY TYR TYR ILE GLN ALA GLN CYS ALA SEQRES 8 A 221 ILE ILE MET PHE ASP VAL THR SER ARG VAL THR TYR LYS SEQRES 9 A 221 ASN VAL PRO ASN TRP HIS ARG ASP LEU VAL ARG VAL CYS SEQRES 10 A 221 GLU ASN ILE PRO ILE VAL LEU CYS GLY ASN LYS VAL ASP SEQRES 11 A 221 ILE LYS ASP ARG LYS VAL LYS ALA LYS SER ILE VAL PHE SEQRES 12 A 221 HIS ARG LYS LYS ASN LEU GLN TYR TYR ASP ILE SER ALA SEQRES 13 A 221 LYS SER ASN TYR ASN PHE GLU LYS PRO PHE LEU TRP LEU SEQRES 14 A 221 ALA ARG LYS LEU ILE GLY ASP PRO ASN LEU GLU PHE VAL SEQRES 15 A 221 ALA MET PRO ALA LEU ALA PRO PRO GLU VAL VAL MET ASP SEQRES 16 A 221 PRO ALA LEU ALA ALA GLN TYR GLU HIS ASP LEU GLU VAL SEQRES 17 A 221 ALA GLN THR THR ALA LEU PRO ASP GLU ASP ASP ASP LEU SEQRES 1 B 221 GLY PRO HIS MET ALA SER ALA ALA GLN GLY GLU PRO GLN SEQRES 2 B 221 VAL GLN PHE LYS LEU VAL LEU VAL GLY ASP GLY GLY THR SEQRES 3 B 221 GLY LYS THR THR PHE VAL LYS ARG HIS LEU THR GLY GLU SEQRES 4 B 221 PHE GLU LYS LYS TYR VAL ALA THR LEU GLY VAL GLU VAL SEQRES 5 B 221 HIS PRO LEU VAL PHE HIS THR ASN ARG GLY PRO ILE LYS SEQRES 6 B 221 PHE ASN VAL TRP ASP THR ALA GLY GLN GLU LYS PHE GLY SEQRES 7 B 221 GLY LEU ARG ASP GLY TYR TYR ILE GLN ALA GLN CYS ALA SEQRES 8 B 221 ILE ILE MET PHE ASP VAL THR SER ARG VAL THR TYR LYS SEQRES 9 B 221 ASN VAL PRO ASN TRP HIS ARG ASP LEU VAL ARG VAL CYS SEQRES 10 B 221 GLU ASN ILE PRO ILE VAL LEU CYS GLY ASN LYS VAL ASP SEQRES 11 B 221 ILE LYS ASP ARG LYS VAL LYS ALA LYS SER ILE VAL PHE SEQRES 12 B 221 HIS ARG LYS LYS ASN LEU GLN TYR TYR ASP ILE SER ALA SEQRES 13 B 221 LYS SER ASN TYR ASN PHE GLU LYS PRO PHE LEU TRP LEU SEQRES 14 B 221 ALA ARG LYS LEU ILE GLY ASP PRO ASN LEU GLU PHE VAL SEQRES 15 B 221 ALA MET PRO ALA LEU ALA PRO PRO GLU VAL VAL MET ASP SEQRES 16 B 221 PRO ALA LEU ALA ALA GLN TYR GLU HIS ASP LEU GLU VAL SEQRES 17 B 221 ALA GLN THR THR ALA LEU PRO ASP GLU ASP ASP ASP LEU HET MG A 301 1 HET GDP A 302 28 HET MG B 301 1 HET GDP B 217 28 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 GDP 2(C10 H15 N5 O11 P2) FORMUL 7 HOH *478(H2 O) HELIX 1 1 GLY A 22 LYS A 28 1 7 HELIX 2 2 HIS A 30 GLU A 36 1 7 HELIX 3 3 GLY A 68 PHE A 72 5 5 HELIX 4 4 ARG A 76 ILE A 81 1 6 HELIX 5 5 SER A 94 ASN A 100 1 7 HELIX 6 6 ASN A 100 CYS A 112 1 13 HELIX 7 7 LYS A 132 ILE A 136 5 5 HELIX 8 8 VAL A 137 ASN A 143 1 7 HELIX 9 9 GLU A 158 GLY A 170 1 13 HELIX 10 10 ASP A 190 THR A 206 1 17 HELIX 11 11 GLY B 22 LYS B 28 1 7 HELIX 12 12 HIS B 30 GLU B 36 1 7 HELIX 13 13 ARG B 76 ILE B 81 1 6 HELIX 14 14 SER B 94 ASN B 100 1 7 HELIX 15 15 ASN B 100 CYS B 112 1 13 HELIX 16 16 LYS B 132 ILE B 136 5 5 HELIX 17 17 VAL B 137 LYS B 142 1 6 HELIX 18 18 PHE B 157 GLY B 170 1 14 HELIX 19 19 ASP B 190 THR B 206 1 17 SHEET 1 A 7 LYS A 38 VAL A 40 0 SHEET 2 A 7 VAL A 45 THR A 54 -1 O VAL A 47 N LYS A 38 SHEET 3 A 7 GLY A 57 THR A 66 -1 O PHE A 61 N LEU A 50 SHEET 4 A 7 GLN A 10 GLY A 17 1 N PHE A 11 O ASN A 62 SHEET 5 A 7 CYS A 85 ASP A 91 1 O MET A 89 N VAL A 16 SHEET 6 A 7 ILE A 117 ASN A 122 1 O ASN A 122 N PHE A 90 SHEET 7 A 7 GLN A 145 ASP A 148 1 O GLN A 145 N LEU A 119 SHEET 1 B 3 LYS A 38 VAL A 40 0 SHEET 2 B 3 VAL A 45 THR A 54 -1 O VAL A 47 N LYS A 38 SHEET 3 B 3 PHE A 176 ALA A 178 -1 O VAL A 177 N HIS A 53 SHEET 1 C 7 LYS B 38 VAL B 40 0 SHEET 2 C 7 VAL B 45 THR B 54 -1 O VAL B 47 N LYS B 38 SHEET 3 C 7 GLY B 57 THR B 66 -1 O PHE B 61 N LEU B 50 SHEET 4 C 7 GLN B 10 GLY B 17 1 N LEU B 13 O TRP B 64 SHEET 5 C 7 CYS B 85 ASP B 91 1 O MET B 89 N VAL B 16 SHEET 6 C 7 ILE B 117 ASN B 122 1 O ASN B 122 N PHE B 90 SHEET 7 C 7 GLN B 145 ASP B 148 1 O GLN B 145 N LEU B 119 LINK OG1 THR A 24 MG MG A 301 1555 1555 2.16 LINK O HOH A 218 MG MG A 301 1555 1555 2.12 LINK O HOH A 220 MG MG A 301 1555 1555 2.19 LINK O HOH A 228 MG MG A 301 1555 1555 2.11 LINK O HOH A 233 MG MG A 301 1555 1555 2.16 LINK MG MG A 301 O1B GDP A 302 1555 1555 2.06 LINK OG1 THR B 24 MG MG B 301 1555 1555 2.21 LINK O1B GDP B 217 MG MG B 301 1555 1555 2.04 LINK O HOH B 219 MG MG B 301 1555 1555 2.25 LINK O HOH B 221 MG MG B 301 1555 1555 2.14 LINK O HOH B 222 MG MG B 301 1555 1555 2.21 LINK O HOH B 223 MG MG B 301 1555 1555 2.15 SITE 1 AC1 6 THR A 24 HOH A 218 HOH A 220 HOH A 228 SITE 2 AC1 6 HOH A 233 GDP A 302 SITE 1 AC2 22 GLY A 20 THR A 21 GLY A 22 LYS A 23 SITE 2 AC2 22 THR A 24 THR A 25 ASN A 122 LYS A 123 SITE 3 AC2 22 ASP A 125 ILE A 126 SER A 150 ALA A 151 SITE 4 AC2 22 LYS A 152 HOH A 218 HOH A 220 HOH A 247 SITE 5 AC2 22 HOH A 277 MG A 301 HOH A 329 HOH A 345 SITE 6 AC2 22 HOH A 439 HOH A 463 SITE 1 AC3 6 THR B 24 GDP B 217 HOH B 219 HOH B 221 SITE 2 AC3 6 HOH B 222 HOH B 223 SITE 1 AC4 24 GLY B 20 THR B 21 GLY B 22 LYS B 23 SITE 2 AC4 24 THR B 24 THR B 25 ASN B 122 LYS B 123 SITE 3 AC4 24 ASP B 125 ILE B 126 SER B 150 ALA B 151 SITE 4 AC4 24 LYS B 152 ASN B 173 HOH B 222 HOH B 223 SITE 5 AC4 24 HOH B 251 HOH B 295 MG B 301 HOH B 354 SITE 6 AC4 24 HOH B 403 HOH B 424 HOH B 500 HOH B 501 CRYST1 81.544 81.544 130.567 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012263 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007659 0.00000