HEADER TRANSCRIPTION 14-MAR-09 3GMJ TITLE CRYSTAL STRUCTURE OF MAD MH2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN MOTHERS AGAINST DPP; COMPND 3 CHAIN: D, B, A, C; COMPND 4 FRAGMENT: MH2 DOMAIN, RESIDUES 215-455; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: MAD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPGH KEYWDS MH2, SMAD, MAD, CYTOPLASM, DEVELOPMENTAL PROTEIN, NUCLEUS, KEYWDS 2 PHOSPHOPROTEIN, TRANSCRIPTION, TRANSCRIPTION REGULATION, UBL KEYWDS 3 CONJUGATION EXPDTA X-RAY DIFFRACTION AUTHOR J.W.WU,C.WANG REVDAT 2 20-MAR-24 3GMJ 1 SEQADV REVDAT 1 15-DEC-09 3GMJ 0 JRNL AUTH C.WANG,L.CHEN,L.WANG,J.W.WU JRNL TITL CRYSTAL STRUCTURE OF THE MH2 DOMAIN OF DROSOPHILA MAD JRNL REF SCI.CHINA, SER.C: LIFE SCI. V. 52 539 2009 JRNL REFN ISSN 1006-9305 JRNL PMID 19557331 JRNL DOI 10.1007/S11427-009-0080-X REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33566 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.3280 - 7.1250 0.98 1876 89 0.1330 0.1690 REMARK 3 2 7.1250 - 5.6860 0.98 1856 101 0.1850 0.2470 REMARK 3 3 5.6860 - 4.9760 0.98 1895 99 0.1540 0.1990 REMARK 3 4 4.9760 - 4.5250 0.98 1897 97 0.1390 0.1680 REMARK 3 5 4.5250 - 4.2030 0.98 1869 97 0.1420 0.1770 REMARK 3 6 4.2030 - 3.9570 0.98 1852 104 0.1560 0.2040 REMARK 3 7 3.9570 - 3.7600 0.98 1897 101 0.1660 0.2230 REMARK 3 8 3.7600 - 3.5970 0.98 1846 113 0.1840 0.2170 REMARK 3 9 3.5970 - 3.4590 0.98 1858 112 0.1980 0.2380 REMARK 3 10 3.4590 - 3.3400 0.98 1892 106 0.2050 0.2150 REMARK 3 11 3.3400 - 3.2360 0.98 1842 113 0.2330 0.2640 REMARK 3 12 3.2360 - 3.1440 0.98 1901 99 0.2320 0.2540 REMARK 3 13 3.1440 - 3.0610 0.98 1875 87 0.2380 0.2880 REMARK 3 14 3.0610 - 2.9870 0.98 1873 89 0.2580 0.3120 REMARK 3 15 2.9870 - 2.9190 0.98 1877 90 0.2680 0.2860 REMARK 3 16 2.9190 - 2.8570 0.98 1886 100 0.2760 0.2950 REMARK 3 17 2.8570 - 2.8000 0.98 1873 104 0.2820 0.3340 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 67.70 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.73000 REMARK 3 B22 (A**2) : -9.73000 REMARK 3 B33 (A**2) : 5.72300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.8490 REMARK 3 OPERATOR: K,H,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6388 REMARK 3 ANGLE : 1.090 8689 REMARK 3 CHIRALITY : 0.071 934 REMARK 3 PLANARITY : 0.004 1139 REMARK 3 DIHEDRAL : 19.274 2240 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GMJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000052046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33568 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%(V/V) METHANOL, 0.3M NA MALONATE, REMARK 280 0.1M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 68.63050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.62384 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.81000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 68.63050 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 39.62384 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.81000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 68.63050 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 39.62384 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.81000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.24768 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 129.62000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 79.24768 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 129.62000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 79.24768 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 129.62000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY D 211 REMARK 465 PRO D 212 REMARK 465 HIS D 213 REMARK 465 MET D 214 REMARK 465 ASP D 215 REMARK 465 SER D 216 REMARK 465 LEU D 217 REMARK 465 ALA D 218 REMARK 465 GLY D 219 REMARK 465 THR D 220 REMARK 465 PRO D 221 REMARK 465 PRO D 222 REMARK 465 PRO D 223 REMARK 465 ALA D 224 REMARK 465 TYR D 225 REMARK 465 SER D 226 REMARK 465 PRO D 227 REMARK 465 SER D 228 REMARK 465 GLU D 229 REMARK 465 ASP D 230 REMARK 465 GLY D 231 REMARK 465 ASN D 232 REMARK 465 SER D 233 REMARK 465 ASN D 234 REMARK 465 ASN D 235 REMARK 465 PRO D 236 REMARK 465 ASN D 237 REMARK 465 ASP D 238 REMARK 465 GLY D 239 REMARK 465 GLY D 240 REMARK 465 GLN D 241 REMARK 465 LEU D 242 REMARK 465 LEU D 243 REMARK 465 ASP D 244 REMARK 465 ALA D 245 REMARK 465 GLN D 246 REMARK 465 MET D 247 REMARK 465 GLY D 248 REMARK 465 ASP D 249 REMARK 465 VAL D 250 REMARK 465 ALA D 251 REMARK 465 GLN D 252 REMARK 465 VAL D 253 REMARK 465 SER D 254 REMARK 465 TYR D 255 REMARK 465 SER D 256 REMARK 465 GLY B 211 REMARK 465 PRO B 212 REMARK 465 HIS B 213 REMARK 465 MET B 214 REMARK 465 ASP B 215 REMARK 465 SER B 216 REMARK 465 LEU B 217 REMARK 465 ALA B 218 REMARK 465 GLY B 219 REMARK 465 THR B 220 REMARK 465 PRO B 221 REMARK 465 PRO B 222 REMARK 465 PRO B 223 REMARK 465 ALA B 224 REMARK 465 TYR B 225 REMARK 465 SER B 226 REMARK 465 PRO B 227 REMARK 465 SER B 228 REMARK 465 GLU B 229 REMARK 465 ASP B 230 REMARK 465 GLY B 231 REMARK 465 ASN B 232 REMARK 465 SER B 233 REMARK 465 ASN B 234 REMARK 465 ASN B 235 REMARK 465 PRO B 236 REMARK 465 ASN B 237 REMARK 465 ASP B 238 REMARK 465 GLY B 239 REMARK 465 GLY B 240 REMARK 465 GLN B 241 REMARK 465 LEU B 242 REMARK 465 LEU B 243 REMARK 465 ASP B 244 REMARK 465 ALA B 245 REMARK 465 GLN B 246 REMARK 465 MET B 247 REMARK 465 GLY B 248 REMARK 465 ASP B 249 REMARK 465 VAL B 250 REMARK 465 ALA B 251 REMARK 465 GLN B 252 REMARK 465 VAL B 253 REMARK 465 SER B 254 REMARK 465 TYR B 255 REMARK 465 SER B 256 REMARK 465 GLY A 211 REMARK 465 PRO A 212 REMARK 465 HIS A 213 REMARK 465 MET A 214 REMARK 465 ASP A 215 REMARK 465 SER A 216 REMARK 465 LEU A 217 REMARK 465 ALA A 218 REMARK 465 GLY A 219 REMARK 465 THR A 220 REMARK 465 PRO A 221 REMARK 465 PRO A 222 REMARK 465 PRO A 223 REMARK 465 ALA A 224 REMARK 465 TYR A 225 REMARK 465 SER A 226 REMARK 465 PRO A 227 REMARK 465 SER A 228 REMARK 465 GLU A 229 REMARK 465 ASP A 230 REMARK 465 GLY A 231 REMARK 465 ASN A 232 REMARK 465 SER A 233 REMARK 465 ASN A 234 REMARK 465 ASN A 235 REMARK 465 PRO A 236 REMARK 465 ASN A 237 REMARK 465 ASP A 238 REMARK 465 GLY A 239 REMARK 465 GLY A 240 REMARK 465 GLN A 241 REMARK 465 LEU A 242 REMARK 465 LEU A 243 REMARK 465 ASP A 244 REMARK 465 ALA A 245 REMARK 465 GLN A 246 REMARK 465 MET A 247 REMARK 465 GLY A 248 REMARK 465 ASP A 249 REMARK 465 VAL A 250 REMARK 465 ALA A 251 REMARK 465 GLN A 252 REMARK 465 VAL A 253 REMARK 465 SER A 254 REMARK 465 TYR A 255 REMARK 465 SER A 256 REMARK 465 GLY C 211 REMARK 465 PRO C 212 REMARK 465 HIS C 213 REMARK 465 MET C 214 REMARK 465 ASP C 215 REMARK 465 SER C 216 REMARK 465 LEU C 217 REMARK 465 ALA C 218 REMARK 465 GLY C 219 REMARK 465 THR C 220 REMARK 465 PRO C 221 REMARK 465 PRO C 222 REMARK 465 PRO C 223 REMARK 465 ALA C 224 REMARK 465 TYR C 225 REMARK 465 SER C 226 REMARK 465 PRO C 227 REMARK 465 SER C 228 REMARK 465 GLU C 229 REMARK 465 ASP C 230 REMARK 465 GLY C 231 REMARK 465 ASN C 232 REMARK 465 SER C 233 REMARK 465 ASN C 234 REMARK 465 ASN C 235 REMARK 465 PRO C 236 REMARK 465 ASN C 237 REMARK 465 ASP C 238 REMARK 465 GLY C 239 REMARK 465 GLY C 240 REMARK 465 GLN C 241 REMARK 465 LEU C 242 REMARK 465 LEU C 243 REMARK 465 ASP C 244 REMARK 465 ALA C 245 REMARK 465 GLN C 246 REMARK 465 MET C 247 REMARK 465 GLY C 248 REMARK 465 ASP C 249 REMARK 465 VAL C 250 REMARK 465 ALA C 251 REMARK 465 GLN C 252 REMARK 465 VAL C 253 REMARK 465 SER C 254 REMARK 465 TYR C 255 REMARK 465 SER C 256 REMARK 465 GLY C 445 REMARK 465 SER C 446 REMARK 465 PRO C 447 REMARK 465 HIS C 448 REMARK 465 ASN C 449 REMARK 465 ALA C 450 REMARK 465 ILE C 451 REMARK 465 SER C 452 REMARK 465 SER C 453 REMARK 465 VAL C 454 REMARK 465 SER C 455 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU D 269 -110.35 74.13 REMARK 500 ASN D 295 -98.50 -63.75 REMARK 500 SER D 296 -61.13 10.21 REMARK 500 ASP D 297 28.12 91.93 REMARK 500 ASN D 306 108.73 -167.55 REMARK 500 THR D 330 -116.38 50.35 REMARK 500 HIS D 354 -113.11 -91.18 REMARK 500 GLN D 380 -75.85 -59.21 REMARK 500 LEU D 381 -48.53 -25.34 REMARK 500 VAL D 407 -78.90 81.07 REMARK 500 GLU D 413 -1.83 95.25 REMARK 500 GLN D 443 78.26 -112.93 REMARK 500 MET D 444 -162.17 -172.20 REMARK 500 SER D 446 162.93 -49.86 REMARK 500 HIS D 448 -96.87 -62.29 REMARK 500 ASN D 449 98.12 -41.58 REMARK 500 ALA D 450 -178.76 -53.29 REMARK 500 LEU B 269 -131.42 59.43 REMARK 500 ASN B 270 44.67 -109.00 REMARK 500 SER B 296 -148.98 -64.75 REMARK 500 ARG B 309 123.26 -30.07 REMARK 500 THR B 330 -106.89 4.48 REMARK 500 ASN B 351 19.95 -64.62 REMARK 500 VAL B 386 -84.99 -49.03 REMARK 500 ASN B 387 28.32 -68.84 REMARK 500 PHE B 390 -70.16 -61.55 REMARK 500 VAL B 407 -65.59 69.20 REMARK 500 GLU B 413 0.25 92.00 REMARK 500 THR B 420 3.48 -68.88 REMARK 500 PRO B 447 -168.31 -55.64 REMARK 500 HIS B 448 -92.05 -103.33 REMARK 500 ASN B 449 97.59 -36.85 REMARK 500 SER B 453 42.46 -104.04 REMARK 500 VAL B 454 -44.39 -159.70 REMARK 500 LEU A 269 -106.35 74.21 REMARK 500 SER A 293 127.24 -22.47 REMARK 500 ASP A 297 6.67 129.51 REMARK 500 ASN A 308 7.12 -60.51 REMARK 500 ASN A 310 -160.46 -107.73 REMARK 500 THR A 330 -121.28 52.39 REMARK 500 PRO A 358 4.19 -62.71 REMARK 500 PHE A 378 -73.48 -59.39 REMARK 500 LEU A 381 -39.08 -39.66 REMARK 500 SER A 385 55.50 -91.05 REMARK 500 VAL A 407 -44.72 79.66 REMARK 500 ALA A 412 77.54 -63.81 REMARK 500 GLU A 413 -29.32 153.98 REMARK 500 MET A 444 125.96 177.91 REMARK 500 HIS A 448 -76.86 -64.38 REMARK 500 ASN A 449 106.80 -43.46 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONFLICT HAS BEEN GENERATED IN CLONING PROCESS. DBREF 3GMJ D 215 455 UNP P42003 MAD_DROME 215 455 DBREF 3GMJ B 215 455 UNP P42003 MAD_DROME 215 455 DBREF 3GMJ A 215 455 UNP P42003 MAD_DROME 215 455 DBREF 3GMJ C 215 455 UNP P42003 MAD_DROME 215 455 SEQADV 3GMJ GLY D 211 UNP P42003 EXPRESSION TAG SEQADV 3GMJ PRO D 212 UNP P42003 EXPRESSION TAG SEQADV 3GMJ HIS D 213 UNP P42003 EXPRESSION TAG SEQADV 3GMJ MET D 214 UNP P42003 EXPRESSION TAG SEQADV 3GMJ GLN D 353 UNP P42003 HIS 353 SEE REMARK 999 SEQADV 3GMJ GLY B 211 UNP P42003 EXPRESSION TAG SEQADV 3GMJ PRO B 212 UNP P42003 EXPRESSION TAG SEQADV 3GMJ HIS B 213 UNP P42003 EXPRESSION TAG SEQADV 3GMJ MET B 214 UNP P42003 EXPRESSION TAG SEQADV 3GMJ GLN B 353 UNP P42003 HIS 353 SEE REMARK 999 SEQADV 3GMJ GLY A 211 UNP P42003 EXPRESSION TAG SEQADV 3GMJ PRO A 212 UNP P42003 EXPRESSION TAG SEQADV 3GMJ HIS A 213 UNP P42003 EXPRESSION TAG SEQADV 3GMJ MET A 214 UNP P42003 EXPRESSION TAG SEQADV 3GMJ GLN A 353 UNP P42003 HIS 353 SEE REMARK 999 SEQADV 3GMJ GLY C 211 UNP P42003 EXPRESSION TAG SEQADV 3GMJ PRO C 212 UNP P42003 EXPRESSION TAG SEQADV 3GMJ HIS C 213 UNP P42003 EXPRESSION TAG SEQADV 3GMJ MET C 214 UNP P42003 EXPRESSION TAG SEQADV 3GMJ GLN C 353 UNP P42003 HIS 353 SEE REMARK 999 SEQRES 1 D 245 GLY PRO HIS MET ASP SER LEU ALA GLY THR PRO PRO PRO SEQRES 2 D 245 ALA TYR SER PRO SER GLU ASP GLY ASN SER ASN ASN PRO SEQRES 3 D 245 ASN ASP GLY GLY GLN LEU LEU ASP ALA GLN MET GLY ASP SEQRES 4 D 245 VAL ALA GLN VAL SER TYR SER GLU PRO ALA PHE TRP ALA SEQRES 5 D 245 SER ILE ALA TYR TYR GLU LEU ASN CYS ARG VAL GLY GLU SEQRES 6 D 245 VAL PHE HIS CYS ASN ASN ASN SER VAL ILE VAL ASP GLY SEQRES 7 D 245 PHE THR ASN PRO SER ASN ASN SER ASP ARG CYS CYS LEU SEQRES 8 D 245 GLY GLN LEU SER ASN VAL ASN ARG ASN SER THR ILE GLU SEQRES 9 D 245 ASN THR ARG ARG HIS ILE GLY LYS GLY VAL HIS LEU TYR SEQRES 10 D 245 TYR VAL THR GLY GLU VAL TYR ALA GLU CYS LEU SER ASP SEQRES 11 D 245 SER ALA ILE PHE VAL GLN SER ARG ASN CYS ASN TYR GLN SEQRES 12 D 245 HIS GLY PHE HIS PRO SER THR VAL CYS LYS ILE PRO PRO SEQRES 13 D 245 GLY CYS SER LEU LYS ILE PHE ASN ASN GLN GLU PHE ALA SEQRES 14 D 245 GLN LEU LEU SER GLN SER VAL ASN ASN GLY PHE GLU ALA SEQRES 15 D 245 VAL TYR GLU LEU THR LYS MET CYS THR ILE ARG MET SER SEQRES 16 D 245 PHE VAL LYS GLY TRP GLY ALA GLU TYR HIS ARG GLN ASP SEQRES 17 D 245 VAL THR SER THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 18 D 245 GLY PRO LEU GLN TRP LEU ASP LYS VAL LEU THR GLN MET SEQRES 19 D 245 GLY SER PRO HIS ASN ALA ILE SER SER VAL SER SEQRES 1 B 245 GLY PRO HIS MET ASP SER LEU ALA GLY THR PRO PRO PRO SEQRES 2 B 245 ALA TYR SER PRO SER GLU ASP GLY ASN SER ASN ASN PRO SEQRES 3 B 245 ASN ASP GLY GLY GLN LEU LEU ASP ALA GLN MET GLY ASP SEQRES 4 B 245 VAL ALA GLN VAL SER TYR SER GLU PRO ALA PHE TRP ALA SEQRES 5 B 245 SER ILE ALA TYR TYR GLU LEU ASN CYS ARG VAL GLY GLU SEQRES 6 B 245 VAL PHE HIS CYS ASN ASN ASN SER VAL ILE VAL ASP GLY SEQRES 7 B 245 PHE THR ASN PRO SER ASN ASN SER ASP ARG CYS CYS LEU SEQRES 8 B 245 GLY GLN LEU SER ASN VAL ASN ARG ASN SER THR ILE GLU SEQRES 9 B 245 ASN THR ARG ARG HIS ILE GLY LYS GLY VAL HIS LEU TYR SEQRES 10 B 245 TYR VAL THR GLY GLU VAL TYR ALA GLU CYS LEU SER ASP SEQRES 11 B 245 SER ALA ILE PHE VAL GLN SER ARG ASN CYS ASN TYR GLN SEQRES 12 B 245 HIS GLY PHE HIS PRO SER THR VAL CYS LYS ILE PRO PRO SEQRES 13 B 245 GLY CYS SER LEU LYS ILE PHE ASN ASN GLN GLU PHE ALA SEQRES 14 B 245 GLN LEU LEU SER GLN SER VAL ASN ASN GLY PHE GLU ALA SEQRES 15 B 245 VAL TYR GLU LEU THR LYS MET CYS THR ILE ARG MET SER SEQRES 16 B 245 PHE VAL LYS GLY TRP GLY ALA GLU TYR HIS ARG GLN ASP SEQRES 17 B 245 VAL THR SER THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 18 B 245 GLY PRO LEU GLN TRP LEU ASP LYS VAL LEU THR GLN MET SEQRES 19 B 245 GLY SER PRO HIS ASN ALA ILE SER SER VAL SER SEQRES 1 A 245 GLY PRO HIS MET ASP SER LEU ALA GLY THR PRO PRO PRO SEQRES 2 A 245 ALA TYR SER PRO SER GLU ASP GLY ASN SER ASN ASN PRO SEQRES 3 A 245 ASN ASP GLY GLY GLN LEU LEU ASP ALA GLN MET GLY ASP SEQRES 4 A 245 VAL ALA GLN VAL SER TYR SER GLU PRO ALA PHE TRP ALA SEQRES 5 A 245 SER ILE ALA TYR TYR GLU LEU ASN CYS ARG VAL GLY GLU SEQRES 6 A 245 VAL PHE HIS CYS ASN ASN ASN SER VAL ILE VAL ASP GLY SEQRES 7 A 245 PHE THR ASN PRO SER ASN ASN SER ASP ARG CYS CYS LEU SEQRES 8 A 245 GLY GLN LEU SER ASN VAL ASN ARG ASN SER THR ILE GLU SEQRES 9 A 245 ASN THR ARG ARG HIS ILE GLY LYS GLY VAL HIS LEU TYR SEQRES 10 A 245 TYR VAL THR GLY GLU VAL TYR ALA GLU CYS LEU SER ASP SEQRES 11 A 245 SER ALA ILE PHE VAL GLN SER ARG ASN CYS ASN TYR GLN SEQRES 12 A 245 HIS GLY PHE HIS PRO SER THR VAL CYS LYS ILE PRO PRO SEQRES 13 A 245 GLY CYS SER LEU LYS ILE PHE ASN ASN GLN GLU PHE ALA SEQRES 14 A 245 GLN LEU LEU SER GLN SER VAL ASN ASN GLY PHE GLU ALA SEQRES 15 A 245 VAL TYR GLU LEU THR LYS MET CYS THR ILE ARG MET SER SEQRES 16 A 245 PHE VAL LYS GLY TRP GLY ALA GLU TYR HIS ARG GLN ASP SEQRES 17 A 245 VAL THR SER THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 18 A 245 GLY PRO LEU GLN TRP LEU ASP LYS VAL LEU THR GLN MET SEQRES 19 A 245 GLY SER PRO HIS ASN ALA ILE SER SER VAL SER SEQRES 1 C 245 GLY PRO HIS MET ASP SER LEU ALA GLY THR PRO PRO PRO SEQRES 2 C 245 ALA TYR SER PRO SER GLU ASP GLY ASN SER ASN ASN PRO SEQRES 3 C 245 ASN ASP GLY GLY GLN LEU LEU ASP ALA GLN MET GLY ASP SEQRES 4 C 245 VAL ALA GLN VAL SER TYR SER GLU PRO ALA PHE TRP ALA SEQRES 5 C 245 SER ILE ALA TYR TYR GLU LEU ASN CYS ARG VAL GLY GLU SEQRES 6 C 245 VAL PHE HIS CYS ASN ASN ASN SER VAL ILE VAL ASP GLY SEQRES 7 C 245 PHE THR ASN PRO SER ASN ASN SER ASP ARG CYS CYS LEU SEQRES 8 C 245 GLY GLN LEU SER ASN VAL ASN ARG ASN SER THR ILE GLU SEQRES 9 C 245 ASN THR ARG ARG HIS ILE GLY LYS GLY VAL HIS LEU TYR SEQRES 10 C 245 TYR VAL THR GLY GLU VAL TYR ALA GLU CYS LEU SER ASP SEQRES 11 C 245 SER ALA ILE PHE VAL GLN SER ARG ASN CYS ASN TYR GLN SEQRES 12 C 245 HIS GLY PHE HIS PRO SER THR VAL CYS LYS ILE PRO PRO SEQRES 13 C 245 GLY CYS SER LEU LYS ILE PHE ASN ASN GLN GLU PHE ALA SEQRES 14 C 245 GLN LEU LEU SER GLN SER VAL ASN ASN GLY PHE GLU ALA SEQRES 15 C 245 VAL TYR GLU LEU THR LYS MET CYS THR ILE ARG MET SER SEQRES 16 C 245 PHE VAL LYS GLY TRP GLY ALA GLU TYR HIS ARG GLN ASP SEQRES 17 C 245 VAL THR SER THR PRO CYS TRP ILE GLU ILE HIS LEU HIS SEQRES 18 C 245 GLY PRO LEU GLN TRP LEU ASP LYS VAL LEU THR GLN MET SEQRES 19 C 245 GLY SER PRO HIS ASN ALA ILE SER SER VAL SER FORMUL 5 HOH *24(H2 O) HELIX 1 1 GLY D 302 LEU D 304 5 3 HELIX 2 2 ASN D 310 GLY D 321 1 12 HELIX 3 3 SER D 347 HIS D 354 1 8 HELIX 4 4 ASN D 374 SER D 385 1 12 HELIX 5 5 VAL D 386 GLY D 389 5 4 HELIX 6 6 PHE D 390 THR D 397 1 8 HELIX 7 7 ASP D 418 THR D 422 5 5 HELIX 8 8 HIS D 431 THR D 442 1 12 HELIX 9 9 ASN B 310 GLY B 321 1 12 HELIX 10 10 ASN B 349 HIS B 354 1 6 HELIX 11 11 ASN B 374 SER B 385 1 12 HELIX 12 12 VAL B 386 ASN B 388 5 3 HELIX 13 13 GLY B 389 GLU B 395 1 7 HELIX 14 14 LEU B 396 CYS B 400 1 5 HELIX 15 15 ASP B 418 THR B 422 5 5 HELIX 16 16 HIS B 431 GLN B 443 1 13 HELIX 17 17 ASN A 310 GLY A 321 1 12 HELIX 18 18 SER A 347 GLY A 355 1 9 HELIX 19 19 ASN A 374 SER A 385 1 12 HELIX 20 20 GLY A 389 LEU A 396 1 8 HELIX 21 21 THR A 397 MET A 399 5 3 HELIX 22 22 ASP A 418 THR A 422 5 5 HELIX 23 23 HIS A 431 THR A 442 1 12 HELIX 24 24 ASN C 310 ARG C 317 1 8 HELIX 25 25 ARG C 318 GLY C 321 5 4 HELIX 26 26 ASN C 349 HIS C 354 1 6 HELIX 27 27 ASN C 375 GLN C 380 1 6 HELIX 28 28 LEU C 382 VAL C 386 5 5 HELIX 29 29 GLY C 389 TYR C 394 1 6 HELIX 30 30 THR C 397 MET C 399 5 3 HELIX 31 31 ASP C 418 THR C 422 5 5 HELIX 32 32 HIS C 431 THR C 442 1 12 SHEET 1 A 6 CYS D 271 CYS D 279 0 SHEET 2 A 6 ALA D 262 GLU D 268 -1 N TYR D 266 O VAL D 273 SHEET 3 A 6 TRP D 425 LEU D 430 -1 O HIS D 429 N SER D 263 SHEET 4 A 6 THR D 401 PHE D 406 -1 N ILE D 402 O ILE D 428 SHEET 5 A 6 ILE D 343 GLN D 346 -1 N GLN D 346 O ARG D 403 SHEET 6 A 6 CYS D 362 ILE D 364 -1 O CYS D 362 N VAL D 345 SHEET 1 B 5 ARG D 298 CYS D 300 0 SHEET 2 B 5 SER D 283 ASP D 287 1 N ILE D 285 O CYS D 299 SHEET 3 B 5 VAL D 324 VAL D 329 -1 O LEU D 326 N VAL D 284 SHEET 4 B 5 GLU D 332 CYS D 337 -1 O GLU D 336 N HIS D 325 SHEET 5 B 5 SER D 369 PHE D 373 -1 O LEU D 370 N ALA D 335 SHEET 1 C 3 CYS B 271 ARG B 272 0 SHEET 2 C 3 ALA B 262 GLU B 268 -1 N GLU B 268 O CYS B 271 SHEET 3 C 3 PHE B 277 CYS B 279 -1 O PHE B 277 N ILE B 264 SHEET 1 D 6 CYS B 271 ARG B 272 0 SHEET 2 D 6 ALA B 262 GLU B 268 -1 N GLU B 268 O CYS B 271 SHEET 3 D 6 TRP B 425 LEU B 430 -1 O TRP B 425 N TYR B 267 SHEET 4 D 6 THR B 401 PHE B 406 -1 N ILE B 402 O ILE B 428 SHEET 5 D 6 ILE B 343 GLN B 346 -1 N GLN B 346 O ARG B 403 SHEET 6 D 6 CYS B 362 ILE B 364 -1 O ILE B 364 N ILE B 343 SHEET 1 E 5 ARG B 298 CYS B 300 0 SHEET 2 E 5 SER B 283 ASP B 287 1 N ILE B 285 O CYS B 299 SHEET 3 E 5 VAL B 324 TYR B 328 -1 O LEU B 326 N VAL B 284 SHEET 4 E 5 VAL B 333 CYS B 337 -1 O GLU B 336 N HIS B 325 SHEET 5 E 5 SER B 369 PHE B 373 -1 O LEU B 370 N ALA B 335 SHEET 1 F 6 PHE A 277 CYS A 279 0 SHEET 2 F 6 ALA A 262 TYR A 267 -1 N ALA A 262 O CYS A 279 SHEET 3 F 6 TRP A 425 LEU A 430 -1 O TRP A 425 N TYR A 267 SHEET 4 F 6 THR A 401 PHE A 406 -1 N ILE A 402 O ILE A 428 SHEET 5 F 6 ILE A 343 GLN A 346 -1 N GLN A 346 O ARG A 403 SHEET 6 F 6 CYS A 362 ILE A 364 -1 O ILE A 364 N ILE A 343 SHEET 1 G 5 ARG A 298 CYS A 300 0 SHEET 2 G 5 SER A 283 ASP A 287 1 N ASP A 287 O CYS A 299 SHEET 3 G 5 VAL A 324 VAL A 329 -1 O LEU A 326 N VAL A 284 SHEET 4 G 5 GLU A 332 CYS A 337 -1 O GLU A 336 N HIS A 325 SHEET 5 G 5 SER A 369 PHE A 373 -1 O LEU A 370 N ALA A 335 SHEET 1 H 3 CYS C 271 ARG C 272 0 SHEET 2 H 3 ALA C 262 GLU C 268 -1 N GLU C 268 O CYS C 271 SHEET 3 H 3 PHE C 277 CYS C 279 -1 O PHE C 277 N ILE C 264 SHEET 1 I 5 CYS C 271 ARG C 272 0 SHEET 2 I 5 ALA C 262 GLU C 268 -1 N GLU C 268 O CYS C 271 SHEET 3 I 5 TRP C 425 LEU C 430 -1 O HIS C 429 N SER C 263 SHEET 4 I 5 THR C 401 PHE C 406 -1 N ILE C 402 O ILE C 428 SHEET 5 I 5 ILE C 343 GLN C 346 -1 N GLN C 346 O ARG C 403 SHEET 1 J 5 ARG C 298 CYS C 300 0 SHEET 2 J 5 SER C 283 ASP C 287 1 N ILE C 285 O CYS C 299 SHEET 3 J 5 HIS C 325 TYR C 327 -1 O LEU C 326 N VAL C 284 SHEET 4 J 5 GLU C 332 GLU C 336 -1 O GLU C 336 N HIS C 325 SHEET 5 J 5 PHE C 373 ASN C 374 -1 O PHE C 373 N VAL C 333 CRYST1 137.261 137.261 194.430 90.00 90.00 120.00 H 3 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007285 0.004206 0.000000 0.00000 SCALE2 0.000000 0.008412 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005143 0.00000