HEADER OXYGEN STORAGE, OXYGEN TRANSPORT 24-MAR-09 3GQP TITLE CRYSTAL STRUCTURE DETERMINATION OF CAT (FELIS SILVESTRIS CATUS) TITLE 2 HEMOGLOBIN AT 2.0 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOGLOBIN SUBUNIT ALPHA; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: HEMOGLOBIN ALPHA CHAIN, ALPHA-GLOBIN; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMOGLOBIN SUBUNIT BETA-A/B; COMPND 7 CHAIN: B, D; COMPND 8 SYNONYM: HEMOGLOBIN BETA-A/B CHAIN, BETA-A/B-GLOBIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FELIS SILVESTRIS CATUS; SOURCE 3 ORGANISM_COMMON: CAT; SOURCE 4 ORGANISM_TAXID: 9685; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: FELIS SILVESTRIS CATUS; SOURCE 7 ORGANISM_COMMON: CAT; SOURCE 8 ORGANISM_TAXID: 9685 KEYWDS LOW OXYGEN AFFINITY, METHEMOGLOBIN, CHROMATOGRAPHY, MONOCLINIC, HEME, KEYWDS 2 IRON, OXYGEN TRANSPORT, TRANSPORT, POLYMORPHISM, OXYGEN STORAGE EXPDTA X-RAY DIFFRACTION AUTHOR M.BALASUBRAMANIAN,P.SATHYA MOORTHY,K.NEELAGANDAN,M.N.PONNUSWAMY REVDAT 3 01-NOV-23 3GQP 1 REMARK LINK REVDAT 2 20-JUN-18 3GQP 1 AUTHOR JRNL REVDAT 1 02-MAR-10 3GQP 0 JRNL AUTH M.BALASUBRAMANIAN,P.SATHYA MOORTHY,K.NEELAGANDAN, JRNL AUTH 2 M.N.PONNUSWAMY JRNL TITL CRYSTAL STRUCTURE DETERMINATION OF CAT (FELIS SILVESTRIS JRNL TITL 2 CATUS) HEMOGLOBIN AT 2 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.NEELAGANDAN,P.SATHYA MOORTHY,M.BALASUBRAMANIAN, REMARK 1 AUTH 2 M.N.PONNUSWAMY REMARK 1 TITL CRYSTALLIZATION OF SHEEP (OVIS ARIES) AND GOAT (CAPRA REMARK 1 TITL 2 HIRCUS) HAEMOGLOBINS UNDER UNBUFFERED LOW-SALT CONDITIONS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 63 887 2007 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 17909297 REMARK 1 DOI 10.1107/S1744309107044296 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.BALASUBRAMANIAN,P.SATHYA MOORTHY,K.NEELAGANDAN, REMARK 1 AUTH 2 M.N.PONNUSWAMY REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY REMARK 1 TITL 2 CRYSTALLOGRAPHIC STUDY OF LOW OXYGEN-AFFINITY HAEMOGLOBIN REMARK 1 TITL 3 FROM CAT (FELIS SILVESTRIS CATUS) IN TWO DIFFERENT CRYSTAL REMARK 1 TITL 4 FORMS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 65 313 2009 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19255493 REMARK 1 DOI 10.1107/S1744309109004503 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.BALASUBRAMANIAN,P.SATHYA MOORTHY,K.NEELAGANDAN, REMARK 1 AUTH 2 M.N.PONNUSWAMY REMARK 1 TITL PRELIMINARY CRYSTALLOGRAPHIC STUDY OF HEMOGLOBIN FROM REMARK 1 TITL 2 BUFFALO (BUBALUS BUBALIS): A LOW OXYGEN AFFINITY SPECIES REMARK 1 REF PROTEIN PEPT.LETT. V. 16 213 2009 REMARK 1 REFN ISSN 0929-8665 REMARK 1 PMID 19200047 REMARK 1 REFERENCE 4 REMARK 1 AUTH P.SATHYA MOORTHY,K.NEELAGANDAN,M.BALASUBRAMANIAN, REMARK 1 AUTH 2 M.N.PONNUSWAMY REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY REMARK 1 TITL 2 DIFFRACTION STUDIES ON GOAT (CAPRA HIRCUS) HEMOGLOBIN - A REMARK 1 TITL 3 LOW OXYGEN AFFINITY SPECIES REMARK 1 REF PROTEIN PEPT.LETT. V. 16 454 2009 REMARK 1 REFN ISSN 0929-8665 REMARK 1 PMID 19356147 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.300 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 31437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3460 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2293 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 229 REMARK 3 BIN FREE R VALUE : 0.3850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 172 REMARK 3 SOLVENT ATOMS : 217 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.60000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : 0.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.328 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.246 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.176 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.110 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.906 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.869 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4716 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6448 ; 1.367 ; 2.048 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 568 ; 5.834 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 196 ;37.516 ;24.082 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 720 ;17.118 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;12.785 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 682 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3602 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2476 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3164 ; 0.292 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 257 ; 0.163 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.221 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.202 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2902 ; 0.729 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4526 ; 1.017 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2057 ; 1.763 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1914 ; 2.393 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GQP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000052194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5417 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOMAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33292 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.07390 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.55 REMARK 200 R MERGE FOR SHELL (I) : 0.32370 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3D4X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% PEG 3350, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.60850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -111.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 90 -72.76 -53.41 REMARK 500 ARG A 92 88.10 61.76 REMARK 500 PRO A 95 -33.35 -37.37 REMARK 500 THR A 137 47.72 -98.37 REMARK 500 SER A 138 -66.26 -93.29 REMARK 500 ASP B 80 55.78 -147.64 REMARK 500 ASN B 123 151.72 -42.26 REMARK 500 ARG C 92 78.72 42.59 REMARK 500 TYR C 140 -27.66 -39.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 143 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 NE2 REMARK 620 2 HEM A 143 NA 91.6 REMARK 620 3 HEM A 143 NB 85.0 89.1 REMARK 620 4 HEM A 143 NC 87.2 178.7 91.2 REMARK 620 5 HEM A 143 ND 95.9 90.0 178.7 89.8 REMARK 620 6 HOH A 175 O 155.5 111.2 86.2 70.1 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 148 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 92 NE2 REMARK 620 2 HEM B 148 NA 92.7 REMARK 620 3 HEM B 148 NB 96.8 88.6 REMARK 620 4 HEM B 148 NC 92.6 174.7 91.0 REMARK 620 5 HEM B 148 ND 90.3 88.9 172.6 90.9 REMARK 620 6 HOH B 166 O 171.2 93.5 89.6 81.2 83.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 143 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 87 NE2 REMARK 620 2 HEM C 143 NA 83.0 REMARK 620 3 HEM C 143 NB 89.9 87.7 REMARK 620 4 HEM C 143 NC 96.8 179.7 92.1 REMARK 620 5 HEM C 143 ND 91.4 93.6 178.3 86.6 REMARK 620 6 HOH C 193 O 174.5 92.7 86.4 87.5 92.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 148 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 92 NE2 REMARK 620 2 HEM D 148 NA 82.5 REMARK 620 3 HEM D 148 NB 92.4 88.3 REMARK 620 4 HEM D 148 NC 100.0 176.8 93.5 REMARK 620 5 HEM D 148 ND 92.0 87.9 173.8 90.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 148 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QU0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF SHEEP METHEMOGLOBIN AT 2.7 REMARK 900 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 2RI4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF GOAT METHEMOGLOBIN AT 2.7 REMARK 900 ANGSTROM REMARK 900 RELATED ID: 3EU1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF GOAT HEMOGLOBIN (CAPRA HIRCUS) REMARK 900 AT 3 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 3D4X RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF CAT (FELIS SILVESTRIS CATUS) REMARK 900 HEMOGLOBIN AT 2.2 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 3CY5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF BUFFALO (BUBALUS BUBALIS) REMARK 900 HEMOGLOBIN AT 2 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 3D1A RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF GOAT HEMOGLOBIN AT 2.61 ANGSTROM REMARK 900 RESOLUTION REMARK 900 RELATED ID: 3GQR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE DETERMINATION OF CAT (FELIS SILVESTRIS CATUS) REMARK 900 HEMOGLOBIN AT 2.4 ANGSTROM RESOLUTION DBREF 3GQP A 1 141 UNP P07405 HBA_FELCA 1 141 DBREF 3GQP B 2 146 UNP P07412 HBB_FELCA 2 146 DBREF 3GQP C 1 141 UNP P07405 HBA_FELCA 1 141 DBREF 3GQP D 2 146 UNP P07412 HBB_FELCA 2 146 SEQRES 1 A 141 VAL LEU SER ALA ALA ASP LYS SER ASN VAL LYS ALA CYS SEQRES 2 A 141 TRP GLY LYS ILE GLY SER HIS ALA GLY GLU TYR GLY ALA SEQRES 3 A 141 GLU ALA LEU GLU ARG THR PHE CYS SER PHE PRO THR THR SEQRES 4 A 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER SEQRES 5 A 141 ALA GLN VAL LYS ALA HIS GLY GLN LYS VAL ALA ASP ALA SEQRES 6 A 141 LEU THR GLN ALA VAL ALA HIS MET ASP ASP LEU PRO THR SEQRES 7 A 141 ALA MET SER ALA LEU SER ASP LEU HIS ALA TYR LYS LEU SEQRES 8 A 141 ARG VAL ASP PRO VAL ASN PHE LYS PHE LEU SER HIS CYS SEQRES 9 A 141 LEU LEU VAL THR LEU ALA CYS HIS HIS PRO ALA GLU PHE SEQRES 10 A 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE PHE SER SEQRES 11 A 141 ALA VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 B 145 PHE LEU THR ALA GLU GLU LYS GLY LEU VAL ASN GLY LEU SEQRES 2 B 145 TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU ALA SEQRES 3 B 145 LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN ARG SEQRES 4 B 145 PHE PHE GLU SER PHE GLY ASP LEU SER SER ALA ASP ALA SEQRES 5 B 145 ILE MET SER ASN ALA LYS VAL LYS ALA HIS GLY LYS LYS SEQRES 6 B 145 VAL LEU ASN SER PHE SER ASP GLY LEU LYS ASN ILE ASP SEQRES 7 B 145 ASP LEU LYS GLY ALA PHE ALA LYS LEU SER GLU LEU HIS SEQRES 8 B 145 CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG LEU SEQRES 9 B 145 LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS PHE SEQRES 10 B 145 GLY HIS ASP PHE ASN PRO GLN VAL GLN ALA ALA PHE GLN SEQRES 11 B 145 LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS LYS SEQRES 12 B 145 TYR HIS SEQRES 1 C 141 VAL LEU SER ALA ALA ASP LYS SER ASN VAL LYS ALA CYS SEQRES 2 C 141 TRP GLY LYS ILE GLY SER HIS ALA GLY GLU TYR GLY ALA SEQRES 3 C 141 GLU ALA LEU GLU ARG THR PHE CYS SER PHE PRO THR THR SEQRES 4 C 141 LYS THR TYR PHE PRO HIS PHE ASP LEU SER HIS GLY SER SEQRES 5 C 141 ALA GLN VAL LYS ALA HIS GLY GLN LYS VAL ALA ASP ALA SEQRES 6 C 141 LEU THR GLN ALA VAL ALA HIS MET ASP ASP LEU PRO THR SEQRES 7 C 141 ALA MET SER ALA LEU SER ASP LEU HIS ALA TYR LYS LEU SEQRES 8 C 141 ARG VAL ASP PRO VAL ASN PHE LYS PHE LEU SER HIS CYS SEQRES 9 C 141 LEU LEU VAL THR LEU ALA CYS HIS HIS PRO ALA GLU PHE SEQRES 10 C 141 THR PRO ALA VAL HIS ALA SER LEU ASP LYS PHE PHE SER SEQRES 11 C 141 ALA VAL SER THR VAL LEU THR SER LYS TYR ARG SEQRES 1 D 145 PHE LEU THR ALA GLU GLU LYS GLY LEU VAL ASN GLY LEU SEQRES 2 D 145 TRP GLY LYS VAL ASN VAL ASP GLU VAL GLY GLY GLU ALA SEQRES 3 D 145 LEU GLY ARG LEU LEU VAL VAL TYR PRO TRP THR GLN ARG SEQRES 4 D 145 PHE PHE GLU SER PHE GLY ASP LEU SER SER ALA ASP ALA SEQRES 5 D 145 ILE MET SER ASN ALA LYS VAL LYS ALA HIS GLY LYS LYS SEQRES 6 D 145 VAL LEU ASN SER PHE SER ASP GLY LEU LYS ASN ILE ASP SEQRES 7 D 145 ASP LEU LYS GLY ALA PHE ALA LYS LEU SER GLU LEU HIS SEQRES 8 D 145 CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG LEU SEQRES 9 D 145 LEU GLY ASN VAL LEU VAL CYS VAL LEU ALA HIS HIS PHE SEQRES 10 D 145 GLY HIS ASP PHE ASN PRO GLN VAL GLN ALA ALA PHE GLN SEQRES 11 D 145 LYS VAL VAL ALA GLY VAL ALA ASN ALA LEU ALA HIS LYS SEQRES 12 D 145 TYR HIS HET HEM A 143 43 HET HEM B 148 43 HET HEM C 143 43 HET HEM D 148 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 9 HOH *217(H2 O) HELIX 1 1 SER A 3 GLY A 18 1 16 HELIX 2 2 HIS A 20 PHE A 36 1 17 HELIX 3 3 PRO A 37 PHE A 43 5 7 HELIX 4 4 SER A 52 HIS A 72 1 21 HELIX 5 5 ASP A 75 MET A 80 1 6 HELIX 6 6 MET A 80 TYR A 89 1 10 HELIX 7 7 PRO A 95 HIS A 113 1 19 HELIX 8 8 THR A 118 THR A 137 1 20 HELIX 9 9 THR B 4 GLY B 16 1 13 HELIX 10 10 ASN B 19 TYR B 35 1 17 HELIX 11 11 PRO B 36 GLY B 46 5 11 HELIX 12 12 SER B 50 SER B 56 1 7 HELIX 13 13 ASN B 57 ASN B 77 1 21 HELIX 14 14 ASP B 80 PHE B 85 1 6 HELIX 15 15 PHE B 85 LYS B 95 1 11 HELIX 16 16 PRO B 100 GLY B 119 1 20 HELIX 17 17 HIS B 120 PHE B 122 5 3 HELIX 18 18 ASN B 123 HIS B 143 1 21 HELIX 19 19 SER C 3 GLY C 18 1 16 HELIX 20 20 HIS C 20 PHE C 36 1 17 HELIX 21 21 PRO C 37 PHE C 43 5 7 HELIX 22 22 SER C 52 HIS C 72 1 21 HELIX 23 23 ASP C 75 MET C 80 1 6 HELIX 24 24 MET C 80 TYR C 89 1 10 HELIX 25 25 ASP C 94 HIS C 113 1 20 HELIX 26 26 THR C 118 SER C 138 1 21 HELIX 27 27 THR D 4 GLY D 16 1 13 HELIX 28 28 GLU D 22 TYR D 35 1 14 HELIX 29 29 PRO D 36 GLY D 46 5 11 HELIX 30 30 SER D 50 SER D 56 1 7 HELIX 31 31 ASN D 57 LYS D 76 1 20 HELIX 32 32 ASP D 80 LYS D 95 1 16 HELIX 33 33 PRO D 100 GLY D 119 1 20 HELIX 34 34 HIS D 120 PHE D 122 5 3 HELIX 35 35 ASN D 123 LYS D 144 1 22 LINK NE2 HIS A 87 FE HEM A 143 1555 1555 2.31 LINK FE HEM A 143 O HOH A 175 1555 1555 2.56 LINK NE2 HIS B 92 FE HEM B 148 1555 1555 2.18 LINK FE HEM B 148 O HOH B 166 1555 1555 2.06 LINK NE2 HIS C 87 FE HEM C 143 1555 1555 2.20 LINK FE HEM C 143 O HOH C 193 1555 1555 2.03 LINK NE2 HIS D 92 FE HEM D 148 1555 1555 2.18 SITE 1 AC1 16 TYR A 42 PHE A 43 HIS A 45 PHE A 46 SITE 2 AC1 16 HIS A 58 LYS A 61 LEU A 86 HIS A 87 SITE 3 AC1 16 LEU A 91 VAL A 93 ASN A 97 PHE A 98 SITE 4 AC1 16 VAL A 132 LEU A 136 HOH A 175 HOH A 177 SITE 1 AC2 13 PHE B 41 PHE B 42 HIS B 63 LYS B 66 SITE 2 AC2 13 SER B 70 LEU B 88 HIS B 92 LEU B 96 SITE 3 AC2 13 ASN B 102 PHE B 103 LEU B 106 LEU B 141 SITE 4 AC2 13 HOH B 166 SITE 1 AC3 15 TYR C 42 PHE C 43 HIS C 45 HIS C 58 SITE 2 AC3 15 LYS C 61 ALA C 65 LEU C 86 HIS C 87 SITE 3 AC3 15 LEU C 91 VAL C 93 ASN C 97 PHE C 98 SITE 4 AC3 15 LEU C 101 LEU C 136 HOH C 193 SITE 1 AC4 11 PHE D 41 PHE D 42 HIS D 63 LYS D 66 SITE 2 AC4 11 SER D 70 HIS D 92 LEU D 96 ASN D 102 SITE 3 AC4 11 PHE D 103 LEU D 106 LEU D 141 CRYST1 55.507 73.217 70.380 90.00 103.38 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018016 0.000000 0.004286 0.00000 SCALE2 0.000000 0.013658 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014605 0.00000