HEADER HYDROLASE 30-MAR-09 3GUO TITLE T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- TITLE 2 PHENOL BINDING COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LYSIS PROTEIN, MURAMIDASE, ENDOLYSIN; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_TAXID: 10665; SOURCE 4 GENE: E; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: RR1; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P1403 KEYWDS T4 LYSOZYME, APOLAR CAVITY, BURIED CHARGE, LIGAND BINDING, KEYWDS 2 ANTIMICROBIAL, BACTERIOLYTIC ENZYME, GLYCOSIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.LIU,B.W.MATTHEWS REVDAT 7 06-SEP-23 3GUO 1 REMARK REVDAT 6 13-OCT-21 3GUO 1 REMARK SEQADV LINK REVDAT 5 01-NOV-17 3GUO 1 REMARK REVDAT 4 09-APR-14 3GUO 1 REMARK REVDAT 3 13-JUL-11 3GUO 1 VERSN REVDAT 2 06-OCT-09 3GUO 1 JRNL REVDAT 1 25-AUG-09 3GUO 0 JRNL AUTH L.LIU,W.A.BAASE,M.M.MICHAEL,B.W.MATTHEWS JRNL TITL USE OF STABILIZING MUTATIONS TO ENGINEER A CHARGED GROUP JRNL TITL 2 WITHIN A LIGAND-BINDING HYDROPHOBIC CAVITY IN T4 LYSOZYME. JRNL REF BIOCHEMISTRY V. 48 8842 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19663503 JRNL DOI 10.1021/BI900685J REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15928 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 848 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.22 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1186 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2586 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.46000 REMARK 3 B22 (A**2) : 1.46000 REMARK 3 B33 (A**2) : -2.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.351 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.249 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.215 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.617 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2704 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3644 ; 1.490 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 6.250 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;35.524 ;23.077 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 500 ;16.974 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;20.471 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 396 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2042 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1229 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1830 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 133 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.212 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.027 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1698 ; 0.779 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2626 ; 1.225 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1173 ; 2.251 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1016 ; 3.401 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 5 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 12 1 REMARK 3 1 B 1 B 12 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 100 ; 0.03 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 100 ; 0.11 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 13 A 26 4 REMARK 3 1 B 13 B 26 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 123 ; 0.17 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 123 ; 0.64 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 27 A 37 1 REMARK 3 1 B 27 B 37 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 79 ; 0.03 ; 0.05 REMARK 3 TIGHT THERMAL 3 A (A**2): 79 ; 0.11 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 38 A 50 4 REMARK 3 1 B 38 B 50 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 4 A (A): 96 ; 0.18 ; 0.50 REMARK 3 MEDIUM THERMAL 4 A (A**2): 96 ; 0.36 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 51 B 602 1 REMARK 3 1 B 51 B 602 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 5 A (A): 931 ; 0.03 ; 0.05 REMARK 3 TIGHT THERMAL 5 A (A**2): 931 ; 0.09 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 12 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7940 13.1860 -4.8080 REMARK 3 T TENSOR REMARK 3 T11: -0.1515 T22: -0.0231 REMARK 3 T33: -0.0983 T12: -0.0166 REMARK 3 T13: -0.0794 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 10.1762 L22: 4.3875 REMARK 3 L33: 16.2547 L12: 1.4751 REMARK 3 L13: 4.9511 L23: 7.8482 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.2257 S13: 0.6524 REMARK 3 S21: -0.4398 S22: -0.4549 S23: 0.1868 REMARK 3 S31: -0.6198 S32: -1.4946 S33: 0.4598 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5750 11.5630 13.1070 REMARK 3 T TENSOR REMARK 3 T11: -0.2078 T22: 0.0388 REMARK 3 T33: -0.0750 T12: -0.0025 REMARK 3 T13: 0.0154 T23: -0.1482 REMARK 3 L TENSOR REMARK 3 L11: 6.7399 L22: 7.8803 REMARK 3 L33: 4.4756 L12: 1.5676 REMARK 3 L13: -1.8068 L23: -5.8972 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.3582 S13: -0.2331 REMARK 3 S21: 0.0234 S22: -0.0825 S23: 0.7285 REMARK 3 S31: 0.1367 S32: -0.2719 S33: 0.0776 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 162 REMARK 3 RESIDUE RANGE : A 501 A 501 REMARK 3 RESIDUE RANGE : A 601 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 4.1600 4.0020 -2.1750 REMARK 3 T TENSOR REMARK 3 T11: -0.0272 T22: -0.1468 REMARK 3 T33: -0.1632 T12: -0.1360 REMARK 3 T13: -0.0216 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 2.8608 L22: 2.4133 REMARK 3 L33: 8.2982 L12: 0.1062 REMARK 3 L13: 1.0681 L23: 2.6501 REMARK 3 S TENSOR REMARK 3 S11: 0.1337 S12: -0.1424 S13: -0.1574 REMARK 3 S21: 0.2375 S22: -0.1417 S23: 0.0548 REMARK 3 S31: 0.9897 S32: -0.6346 S33: 0.0081 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 170 B 675 REMARK 3 RESIDUE RANGE : A 165 A 166 REMARK 3 RESIDUE RANGE : B 165 B 166 REMARK 3 ORIGIN FOR THE GROUP (A): 9.7620 14.3200 -4.8030 REMARK 3 T TENSOR REMARK 3 T11: -0.0082 T22: -0.0048 REMARK 3 T33: -0.0158 T12: -0.0107 REMARK 3 T13: -0.0324 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 0.0183 L22: 0.2356 REMARK 3 L33: 1.0377 L12: 0.0401 REMARK 3 L13: -0.1345 L23: -0.2099 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: -0.0426 S13: 0.0269 REMARK 3 S21: -0.0520 S22: 0.0920 S23: 0.0586 REMARK 3 S31: -0.0249 S32: -0.1005 S33: -0.0783 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 12 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4350 25.3970 -6.8730 REMARK 3 T TENSOR REMARK 3 T11: 0.0321 T22: -0.1301 REMARK 3 T33: -0.0990 T12: -0.0403 REMARK 3 T13: -0.0122 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 3.5600 L22: 12.4380 REMARK 3 L33: 19.8119 L12: 1.3185 REMARK 3 L13: 7.9137 L23: 8.0819 REMARK 3 S TENSOR REMARK 3 S11: -0.4719 S12: -0.6260 S13: 0.1392 REMARK 3 S21: -0.3535 S22: -0.1348 S23: 0.8166 REMARK 3 S31: -1.7785 S32: -0.7354 S33: 0.6067 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 50 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9740 30.4940 -25.3230 REMARK 3 T TENSOR REMARK 3 T11: 0.4655 T22: -0.1638 REMARK 3 T33: 0.1494 T12: -0.3901 REMARK 3 T13: -0.2235 T23: 0.2436 REMARK 3 L TENSOR REMARK 3 L11: 19.3470 L22: 8.4894 REMARK 3 L33: 17.4509 L12: -3.3381 REMARK 3 L13: -0.8263 L23: 2.8238 REMARK 3 S TENSOR REMARK 3 S11: -0.9516 S12: 1.3835 S13: 2.6365 REMARK 3 S21: -0.5375 S22: 0.3729 S23: -0.6624 REMARK 3 S31: -2.9076 S32: 2.0006 S33: 0.5787 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 51 B 162 REMARK 3 ORIGIN FOR THE GROUP (A): 20.8040 20.6800 -10.2640 REMARK 3 T TENSOR REMARK 3 T11: -0.1152 T22: 0.0031 REMARK 3 T33: -0.1614 T12: -0.1712 REMARK 3 T13: 0.0323 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 2.5737 L22: 2.9383 REMARK 3 L33: 8.2495 L12: -0.2403 REMARK 3 L13: 2.5490 L23: 1.0249 REMARK 3 S TENSOR REMARK 3 S11: -0.1545 S12: 0.2406 S13: 0.0836 REMARK 3 S21: -0.1473 S22: 0.1310 S23: -0.1702 REMARK 3 S31: -0.7764 S32: 1.1673 S33: 0.0236 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052328. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : KOHZU REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 46.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3GUI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.14M MAGNESIUM/CALCIUM REMARK 280 SULFATE, 0.1M PIPES, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.12650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.68975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.56325 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 163 REMARK 465 LEU A 164 REMARK 465 ASN B 163 REMARK 465 LEU B 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 17 132.16 -39.59 REMARK 500 SER A 136 155.50 -44.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPH A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPH B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 165 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GUI RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 APO STRUCTURE REMARK 900 RELATED ID: 3GUJ RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 BENZENE BINDING REMARK 900 RELATED ID: 3GUK RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 TOLUENE BINDING REMARK 900 RELATED ID: 3GUL RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 ETHYLBENZENE BINDING REMARK 900 RELATED ID: 3GUM RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 P-XYLENE BINDING REMARK 900 RELATED ID: 3GUN RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 ANILINE BINDING REMARK 900 RELATED ID: 3GUP RELATED DB: PDB REMARK 900 T4 LYSOZYME M102E/L99A MUTANT WITH BURIED CHARGE IN APOLAR CAVITY-- REMARK 900 PYRIDINE BINDING DBREF 3GUO A 1 164 UNP P00720 LYS_BPT4 1 164 DBREF 3GUO B 1 164 UNP P00720 LYS_BPT4 1 164 SEQADV 3GUO CYS A 21 UNP P00720 THR 21 ENGINEERED MUTATION SEQADV 3GUO ASP A 38 UNP P00720 SER 38 ENGINEERED MUTATION SEQADV 3GUO ALA A 99 UNP P00720 LEU 99 ENGINEERED MUTATION SEQADV 3GUO GLU A 102 UNP P00720 MET 102 ENGINEERED MUTATION SEQADV 3GUO VAL A 108 UNP P00720 GLU 108 ENGINEERED MUTATION SEQADV 3GUO VAL A 117 UNP P00720 SER 117 ENGINEERED MUTATION SEQADV 3GUO CYS A 142 UNP P00720 THR 142 ENGINEERED MUTATION SEQADV 3GUO ASP A 144 UNP P00720 ASN 144 ENGINEERED MUTATION SEQADV 3GUO CYS B 21 UNP P00720 THR 21 ENGINEERED MUTATION SEQADV 3GUO ASP B 38 UNP P00720 SER 38 ENGINEERED MUTATION SEQADV 3GUO ALA B 99 UNP P00720 LEU 99 ENGINEERED MUTATION SEQADV 3GUO GLU B 102 UNP P00720 MET 102 ENGINEERED MUTATION SEQADV 3GUO VAL B 108 UNP P00720 GLU 108 ENGINEERED MUTATION SEQADV 3GUO VAL B 117 UNP P00720 SER 117 ENGINEERED MUTATION SEQADV 3GUO CYS B 142 UNP P00720 THR 142 ENGINEERED MUTATION SEQADV 3GUO ASP B 144 UNP P00720 ASN 144 ENGINEERED MUTATION SEQRES 1 A 164 MET ASN ILE PHE GLU MET LEU ARG ILE ASP GLU GLY LEU SEQRES 2 A 164 ARG LEU LYS ILE TYR LYS ASP CYS GLU GLY TYR TYR THR SEQRES 3 A 164 ILE GLY ILE GLY HIS LEU LEU THR LYS SER PRO ASP LEU SEQRES 4 A 164 ASN ALA ALA LYS SER GLU LEU ASP LYS ALA ILE GLY ARG SEQRES 5 A 164 ASN CYS ASN GLY VAL ILE THR LYS ASP GLU ALA GLU LYS SEQRES 6 A 164 LEU PHE ASN GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE SEQRES 7 A 164 LEU ARG ASN ALA LYS LEU LYS PRO VAL TYR ASP SER LEU SEQRES 8 A 164 ASP ALA VAL ARG ARG CME ALA ALA ILE ASN GLU VAL PHE SEQRES 9 A 164 GLN MET GLY VAL THR GLY VAL ALA GLY PHE THR ASN VAL SEQRES 10 A 164 LEU ARG MET LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA SEQRES 11 A 164 VAL ASN LEU ALA LYS SER ARG TRP TYR ASN GLN CYS PRO SEQRES 12 A 164 ASP ARG ALA LYS ARG VAL ILE THR THR PHE ARG THR GLY SEQRES 13 A 164 THR TRP ASP ALA TYR LYS ASN LEU SEQRES 1 B 164 MET ASN ILE PHE GLU MET LEU ARG ILE ASP GLU GLY LEU SEQRES 2 B 164 ARG LEU LYS ILE TYR LYS ASP CYS GLU GLY TYR TYR THR SEQRES 3 B 164 ILE GLY ILE GLY HIS LEU LEU THR LYS SER PRO ASP LEU SEQRES 4 B 164 ASN ALA ALA LYS SER GLU LEU ASP LYS ALA ILE GLY ARG SEQRES 5 B 164 ASN CYS ASN GLY VAL ILE THR LYS ASP GLU ALA GLU LYS SEQRES 6 B 164 LEU PHE ASN GLN ASP VAL ASP ALA ALA VAL ARG GLY ILE SEQRES 7 B 164 LEU ARG ASN ALA LYS LEU LYS PRO VAL TYR ASP SER LEU SEQRES 8 B 164 ASP ALA VAL ARG ARG CME ALA ALA ILE ASN GLU VAL PHE SEQRES 9 B 164 GLN MET GLY VAL THR GLY VAL ALA GLY PHE THR ASN VAL SEQRES 10 B 164 LEU ARG MET LEU GLN GLN LYS ARG TRP ASP GLU ALA ALA SEQRES 11 B 164 VAL ASN LEU ALA LYS SER ARG TRP TYR ASN GLN CYS PRO SEQRES 12 B 164 ASP ARG ALA LYS ARG VAL ILE THR THR PHE ARG THR GLY SEQRES 13 B 164 THR TRP ASP ALA TYR LYS ASN LEU MODRES 3GUO CME A 97 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE MODRES 3GUO CME B 97 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 97 10 HET CME B 97 10 HET IPH A 501 7 HET CL A 165 1 HET CA A 166 1 HET IPH B 501 7 HET CL B 165 1 HET CL B 166 1 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM IPH PHENOL HETNAM CL CHLORIDE ION HETNAM CA CALCIUM ION FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 3 IPH 2(C6 H6 O) FORMUL 4 CL 3(CL 1-) FORMUL 5 CA CA 2+ FORMUL 9 HOH *89(H2 O) HELIX 1 1 ASN A 2 GLY A 12 1 11 HELIX 2 2 ASP A 38 GLY A 51 1 14 HELIX 3 3 THR A 59 ARG A 80 1 22 HELIX 4 4 LEU A 84 LEU A 91 1 8 HELIX 5 5 ASP A 92 PHE A 114 1 23 HELIX 6 6 PHE A 114 GLN A 123 1 10 HELIX 7 7 ARG A 125 ALA A 134 1 10 HELIX 8 8 SER A 136 CYS A 142 1 7 HELIX 9 9 CYS A 142 GLY A 156 1 15 HELIX 10 10 TRP A 158 LYS A 162 5 5 HELIX 11 11 ASN B 2 GLY B 12 1 11 HELIX 12 12 ASP B 38 GLY B 51 1 14 HELIX 13 13 THR B 59 ASN B 81 1 23 HELIX 14 14 LEU B 84 LEU B 91 1 8 HELIX 15 15 ASP B 92 PHE B 114 1 23 HELIX 16 16 PHE B 114 GLN B 123 1 10 HELIX 17 17 ARG B 125 ALA B 134 1 10 HELIX 18 18 SER B 136 CYS B 142 1 7 HELIX 19 19 CYS B 142 GLY B 156 1 15 HELIX 20 20 TRP B 158 LYS B 162 5 5 SHEET 1 A 3 ARG A 14 LYS A 19 0 SHEET 2 A 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18 SHEET 3 A 3 HIS A 31 THR A 34 -1 O LEU A 33 N TYR A 25 SHEET 1 B 3 ARG B 14 LYS B 19 0 SHEET 2 B 3 TYR B 25 GLY B 28 -1 O GLY B 28 N ARG B 14 SHEET 3 B 3 HIS B 31 THR B 34 -1 O LEU B 33 N TYR B 25 SSBOND 1 CYS A 21 CYS A 142 1555 1555 2.04 SSBOND 2 CYS B 21 CYS B 142 1555 1555 2.04 LINK C ARG A 96 N CME A 97 1555 1555 1.34 LINK C CME A 97 N ALA A 98 1555 1555 1.34 LINK C ARG B 96 N CME B 97 1555 1555 1.34 LINK C CME B 97 N ALA B 98 1555 1555 1.34 CISPEP 1 CYS A 54 ASN A 55 0 2.25 CISPEP 2 CYS B 54 ASN B 55 0 -1.99 SITE 1 AC1 7 ALA A 99 GLU A 102 VAL A 103 VAL A 111 SITE 2 AC1 7 LEU A 121 PHE A 153 HOH A 601 SITE 1 AC2 4 CYS A 142 PRO A 143 ASP A 144 ARG A 145 SITE 1 AC3 2 TYR A 88 TYR B 88 SITE 1 AC4 6 ALA B 99 GLU B 102 VAL B 111 LEU B 121 SITE 2 AC4 6 PHE B 153 HOH B 602 SITE 1 AC5 4 CYS B 142 PRO B 143 ASP B 144 ARG B 145 CRYST1 49.514 49.514 130.253 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020196 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007677 0.00000