HEADER OXIDOREDUCTASE 03-APR-09 3GYE TITLE DIDYDROOROTATE DEHYDROGENASE FROM LEISHMANIA MAJOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROOROTATE DEHYDROGENASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.3.3.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 5664; SOURCE 4 STRAIN: FRIEDLIN; SOURCE 5 GENE: LMJF16.0530, PYRD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS ALPHA-BETA-BARRELS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.T.CORDEIRO,P.R.FELICIANO,M.C.NONATO REVDAT 2 06-SEP-23 3GYE 1 REMARK SEQADV REVDAT 1 07-APR-10 3GYE 0 JRNL AUTH A.T.CORDEIRO,P.R.FELICIANO,M.C.NONATO JRNL TITL CRYSTAL STRUCTURE OF LEISHMANIA MAJOR DIHYDROOROTATE JRNL TITL 2 DEHYDROGENASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 52702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2820 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3857 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1920 REMARK 3 BIN FREE R VALUE SET COUNT : 207 REMARK 3 BIN FREE R VALUE : 0.2320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4554 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 358 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -0.58000 REMARK 3 B12 (A**2) : 0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.643 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4756 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6446 ; 1.202 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 602 ; 5.849 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 200 ;38.814 ;24.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 784 ;12.601 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;15.859 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 716 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3586 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2312 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3316 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 369 ; 0.114 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.246 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3099 ; 0.728 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4780 ; 1.125 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1958 ; 1.920 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1664 ; 3.145 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 132 5 REMARK 3 1 B 1 B 132 5 REMARK 3 2 A 145 A 321 5 REMARK 3 2 B 145 B 321 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1193 ; 0.11 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 1112 ; 0.16 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1193 ; 0.56 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 1112 ; 1.01 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GYE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-09. REMARK 100 THE DEPOSITION ID IS D_1000052461. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU ULTRAX 18 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55526 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 124.035 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1DOR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM TRIBASIC DIHYDRATE PH 5.6, REMARK 280 1M LITHIUM SULFATE AND 0.5M AMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.25000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.50000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.87500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.12500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.62500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ALA A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 SER A 130 REMARK 465 CYS A 131 REMARK 465 PRO A 132 REMARK 465 ASN A 133 REMARK 465 VAL A 134 REMARK 465 PRO A 135 REMARK 465 GLY A 136 REMARK 465 LYS A 137 REMARK 465 PRO A 138 REMARK 465 GLN A 139 REMARK 465 VAL A 140 REMARK 465 ALA A 141 REMARK 465 TYR A 142 REMARK 465 ASP A 313 REMARK 465 GLY A 314 REMARK 465 THR A 315 REMARK 465 ALA A 316 REMARK 465 GLU A 317 REMARK 465 SER A 318 REMARK 465 THR A 319 REMARK 465 ARG A 320 REMARK 465 MET B -33 REMARK 465 GLY B -32 REMARK 465 SER B -31 REMARK 465 SER B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 SER B -23 REMARK 465 SER B -22 REMARK 465 GLY B -21 REMARK 465 LEU B -20 REMARK 465 VAL B -19 REMARK 465 PRO B -18 REMARK 465 ALA B -17 REMARK 465 GLY B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 MET B -13 REMARK 465 ALA B -12 REMARK 465 SER B -11 REMARK 465 MET B -10 REMARK 465 THR B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 GLN B -6 REMARK 465 GLN B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 SER B 130 REMARK 465 CYS B 131 REMARK 465 PRO B 132 REMARK 465 ASN B 133 REMARK 465 VAL B 134 REMARK 465 PRO B 135 REMARK 465 GLY B 136 REMARK 465 LYS B 137 REMARK 465 PRO B 138 REMARK 465 GLN B 139 REMARK 465 VAL B 140 REMARK 465 ALA B 141 REMARK 465 TYR B 142 REMARK 465 ASP B 313 REMARK 465 GLY B 314 REMARK 465 THR B 315 REMARK 465 ALA B 316 REMARK 465 GLU B 317 REMARK 465 SER B 318 REMARK 465 THR B 319 REMARK 465 ARG B 320 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 24 27.07 -158.03 REMARK 500 PRO A 159 39.41 -87.94 REMARK 500 CYS B 24 25.29 -155.54 REMARK 500 PRO B 159 48.87 -84.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 322 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 322 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3C3N RELATED DB: PDB REMARK 900 TRYPANOSOMA CRUZI DHODH REMARK 900 RELATED ID: 3GZ3 RELATED DB: PDB DBREF 3GYE A 1 320 UNP Q4QEW7 Q4QEW7_LEIMA 1 320 DBREF 3GYE B 1 320 UNP Q4QEW7 Q4QEW7_LEIMA 1 320 SEQADV 3GYE MET A -33 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -32 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A -31 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A -30 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -29 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -28 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -27 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -26 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -25 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -24 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A -23 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A -22 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -21 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE LEU A -20 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE VAL A -19 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE PRO A -18 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE ALA A -17 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -16 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A -15 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS A -14 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET A -13 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE ALA A -12 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A -11 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET A -10 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE THR A -9 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -8 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -7 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLN A -6 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLN A -5 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET A -4 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -3 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE ARG A -2 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY A -1 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER A 0 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET B -33 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -32 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B -31 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B -30 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -29 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -28 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -27 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -26 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -25 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -24 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B -23 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B -22 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -21 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE LEU B -20 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE VAL B -19 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE PRO B -18 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE ALA B -17 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -16 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B -15 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE HIS B -14 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET B -13 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE ALA B -12 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B -11 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET B -10 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE THR B -9 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -8 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -7 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLN B -6 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLN B -5 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE MET B -4 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -3 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE ARG B -2 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE GLY B -1 UNP Q4QEW7 EXPRESSION TAG SEQADV 3GYE SER B 0 UNP Q4QEW7 EXPRESSION TAG SEQRES 1 A 354 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 354 LEU VAL PRO ALA GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 354 GLY GLN GLN MET GLY ARG GLY SER MET SER LEU GLN VAL SEQRES 4 A 354 ASN LEU LEU ASN ASN THR PHE ALA ASN PRO PHE MET ASN SEQRES 5 A 354 ALA ALA GLY VAL MET CYS THR THR THR GLU GLU LEU VAL SEQRES 6 A 354 ALA MET THR GLU SER ALA SER GLY SER LEU VAL SER LYS SEQRES 7 A 354 SER CYS THR PRO ALA LEU ARG GLU GLY ASN PRO THR PRO SEQRES 8 A 354 ARG TYR GLN ALA LEU PRO LEU GLY SER ILE ASN SER MET SEQRES 9 A 354 GLY LEU PRO ASN ASN GLY PHE ASP PHE TYR LEU ALA TYR SEQRES 10 A 354 ALA ALA GLU GLN HIS ASP TYR GLY LYS LYS PRO LEU PHE SEQRES 11 A 354 LEU SER MET SER GLY LEU SER MET ARG GLU ASN VAL GLU SEQRES 12 A 354 MET CYS LYS ARG LEU ALA ALA VAL ALA THR GLU LYS GLY SEQRES 13 A 354 VAL ILE LEU GLU LEU ASN LEU SER CYS PRO ASN VAL PRO SEQRES 14 A 354 GLY LYS PRO GLN VAL ALA TYR ASP PHE ASP ALA MET ARG SEQRES 15 A 354 GLN CYS LEU THR ALA VAL SER GLU VAL TYR PRO HIS SER SEQRES 16 A 354 PHE GLY VAL LYS MET PRO PRO TYR PHE ASP PHE ALA HIS SEQRES 17 A 354 PHE ASP ALA ALA ALA GLU ILE LEU ASN GLU PHE PRO LYS SEQRES 18 A 354 VAL GLN PHE ILE THR CYS ILE ASN SER ILE GLY ASN GLY SEQRES 19 A 354 LEU VAL ILE ASP ALA GLU THR GLU SER VAL VAL ILE LYS SEQRES 20 A 354 PRO LYS GLN GLY PHE GLY GLY LEU GLY GLY ARG TYR VAL SEQRES 21 A 354 LEU PRO THR ALA LEU ALA ASN ILE ASN ALA PHE TYR ARG SEQRES 22 A 354 ARG CYS PRO GLY LYS LEU ILE PHE GLY CYS GLY GLY VAL SEQRES 23 A 354 TYR THR GLY GLU ASP ALA PHE LEU HIS VAL LEU ALA GLY SEQRES 24 A 354 ALA SER MET VAL GLN VAL GLY THR ALA LEU GLN GLU GLU SEQRES 25 A 354 GLY PRO SER ILE PHE GLU ARG LEU THR SER GLU LEU LEU SEQRES 26 A 354 GLY VAL MET ALA LYS LYS ARG TYR GLN THR LEU ASP GLU SEQRES 27 A 354 PHE ARG GLY LYS VAL ARG THR LEU ASP GLY THR ALA GLU SEQRES 28 A 354 SER THR ARG SEQRES 1 B 354 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 354 LEU VAL PRO ALA GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 B 354 GLY GLN GLN MET GLY ARG GLY SER MET SER LEU GLN VAL SEQRES 4 B 354 ASN LEU LEU ASN ASN THR PHE ALA ASN PRO PHE MET ASN SEQRES 5 B 354 ALA ALA GLY VAL MET CYS THR THR THR GLU GLU LEU VAL SEQRES 6 B 354 ALA MET THR GLU SER ALA SER GLY SER LEU VAL SER LYS SEQRES 7 B 354 SER CYS THR PRO ALA LEU ARG GLU GLY ASN PRO THR PRO SEQRES 8 B 354 ARG TYR GLN ALA LEU PRO LEU GLY SER ILE ASN SER MET SEQRES 9 B 354 GLY LEU PRO ASN ASN GLY PHE ASP PHE TYR LEU ALA TYR SEQRES 10 B 354 ALA ALA GLU GLN HIS ASP TYR GLY LYS LYS PRO LEU PHE SEQRES 11 B 354 LEU SER MET SER GLY LEU SER MET ARG GLU ASN VAL GLU SEQRES 12 B 354 MET CYS LYS ARG LEU ALA ALA VAL ALA THR GLU LYS GLY SEQRES 13 B 354 VAL ILE LEU GLU LEU ASN LEU SER CYS PRO ASN VAL PRO SEQRES 14 B 354 GLY LYS PRO GLN VAL ALA TYR ASP PHE ASP ALA MET ARG SEQRES 15 B 354 GLN CYS LEU THR ALA VAL SER GLU VAL TYR PRO HIS SER SEQRES 16 B 354 PHE GLY VAL LYS MET PRO PRO TYR PHE ASP PHE ALA HIS SEQRES 17 B 354 PHE ASP ALA ALA ALA GLU ILE LEU ASN GLU PHE PRO LYS SEQRES 18 B 354 VAL GLN PHE ILE THR CYS ILE ASN SER ILE GLY ASN GLY SEQRES 19 B 354 LEU VAL ILE ASP ALA GLU THR GLU SER VAL VAL ILE LYS SEQRES 20 B 354 PRO LYS GLN GLY PHE GLY GLY LEU GLY GLY ARG TYR VAL SEQRES 21 B 354 LEU PRO THR ALA LEU ALA ASN ILE ASN ALA PHE TYR ARG SEQRES 22 B 354 ARG CYS PRO GLY LYS LEU ILE PHE GLY CYS GLY GLY VAL SEQRES 23 B 354 TYR THR GLY GLU ASP ALA PHE LEU HIS VAL LEU ALA GLY SEQRES 24 B 354 ALA SER MET VAL GLN VAL GLY THR ALA LEU GLN GLU GLU SEQRES 25 B 354 GLY PRO SER ILE PHE GLU ARG LEU THR SER GLU LEU LEU SEQRES 26 B 354 GLY VAL MET ALA LYS LYS ARG TYR GLN THR LEU ASP GLU SEQRES 27 B 354 PHE ARG GLY LYS VAL ARG THR LEU ASP GLY THR ALA GLU SEQRES 28 B 354 SER THR ARG HET FMN A 321 31 HET GOL A 322 6 HET FMN B 321 31 HET GOL B 322 6 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM GOL GLYCEROL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 7 HOH *358(H2 O) HELIX 1 1 THR A 26 SER A 36 1 11 HELIX 2 2 GLY A 76 GLN A 87 1 12 HELIX 3 3 SER A 103 GLY A 122 1 20 HELIX 4 4 ASP A 143 TYR A 158 1 16 HELIX 5 5 ASP A 171 GLU A 184 1 14 HELIX 6 6 LYS A 213 GLN A 216 5 4 HELIX 7 7 GLY A 223 TYR A 225 5 3 HELIX 8 8 VAL A 226 CYS A 241 1 16 HELIX 9 9 THR A 254 GLY A 265 1 12 HELIX 10 10 GLY A 272 GLY A 279 1 8 HELIX 11 11 SER A 281 LYS A 297 1 17 HELIX 12 12 THR A 301 PHE A 305 5 5 HELIX 13 13 THR B 26 SER B 36 1 11 HELIX 14 14 GLY B 76 GLN B 87 1 12 HELIX 15 15 SER B 103 GLY B 122 1 20 HELIX 16 16 ASP B 143 TYR B 158 1 16 HELIX 17 17 ASP B 171 GLU B 184 1 14 HELIX 18 18 LYS B 213 GLN B 216 5 4 HELIX 19 19 GLY B 223 TYR B 225 5 3 HELIX 20 20 VAL B 226 CYS B 241 1 16 HELIX 21 21 THR B 254 GLY B 265 1 12 HELIX 22 22 GLY B 272 GLY B 279 1 8 HELIX 23 23 SER B 281 LYS B 297 1 17 HELIX 24 24 THR B 301 PHE B 305 5 5 SHEET 1 A 2 VAL A 5 LEU A 7 0 SHEET 2 A 2 ASN A 10 PHE A 12 -1 O PHE A 12 N VAL A 5 SHEET 1 B 8 PHE A 16 ASN A 18 0 SHEET 2 B 8 ALA A 266 VAL A 271 1 O VAL A 269 N MET A 17 SHEET 3 B 8 LEU A 245 CYS A 249 1 N ILE A 246 O SER A 267 SHEET 4 B 8 VAL A 188 CYS A 193 1 N ILE A 191 O PHE A 247 SHEET 5 B 8 PHE A 162 MET A 166 1 N VAL A 164 O THR A 192 SHEET 6 B 8 ILE A 124 ASN A 128 1 N LEU A 127 O GLY A 163 SHEET 7 B 8 LEU A 95 MET A 99 1 N MET A 99 O ASN A 128 SHEET 8 B 8 LEU A 41 CYS A 46 1 N LEU A 41 O PHE A 96 SHEET 1 C 4 TYR A 59 LEU A 62 0 SHEET 2 C 4 GLY A 65 ASN A 68 -1 O GLY A 65 N LEU A 62 SHEET 3 C 4 PHE A 218 GLY A 222 -1 O GLY A 220 N ASN A 68 SHEET 4 C 4 ILE A 197 LEU A 201 -1 N ILE A 197 O LEU A 221 SHEET 1 D 2 ILE A 203 ASP A 204 0 SHEET 2 D 2 SER A 209 VAL A 210 -1 O SER A 209 N ASP A 204 SHEET 1 E 2 VAL B 5 LEU B 7 0 SHEET 2 E 2 ASN B 10 PHE B 12 -1 O PHE B 12 N VAL B 5 SHEET 1 F 8 PHE B 16 ASN B 18 0 SHEET 2 F 8 ALA B 266 VAL B 271 1 O VAL B 271 N MET B 17 SHEET 3 F 8 LEU B 245 CYS B 249 1 N ILE B 246 O SER B 267 SHEET 4 F 8 VAL B 188 CYS B 193 1 N ILE B 191 O PHE B 247 SHEET 5 F 8 PHE B 162 MET B 166 1 N VAL B 164 O THR B 192 SHEET 6 F 8 ILE B 124 ASN B 128 1 N LEU B 127 O GLY B 163 SHEET 7 F 8 LEU B 95 MET B 99 1 N LEU B 97 O ILE B 124 SHEET 8 F 8 LEU B 41 CYS B 46 1 N LEU B 41 O PHE B 96 SHEET 1 G 4 TYR B 59 LEU B 62 0 SHEET 2 G 4 GLY B 65 ASN B 68 -1 O GLY B 65 N LEU B 62 SHEET 3 G 4 PHE B 218 GLY B 222 -1 O GLY B 220 N ASN B 68 SHEET 4 G 4 ILE B 197 LEU B 201 -1 N ILE B 197 O LEU B 221 SHEET 1 H 2 ILE B 203 ASP B 204 0 SHEET 2 H 2 SER B 209 VAL B 210 -1 O SER B 209 N ASP B 204 CISPEP 1 THR A 56 PRO A 57 0 -4.11 CISPEP 2 CYS A 193 ILE A 194 0 14.15 CISPEP 3 THR B 56 PRO B 57 0 -2.54 CISPEP 4 CYS B 193 ILE B 194 0 14.85 SITE 1 AC1 21 ALA A 19 ALA A 20 GLY A 21 LYS A 44 SITE 2 AC1 21 SER A 45 ASN A 68 ASN A 128 LYS A 165 SITE 3 AC1 21 ILE A 194 ASN A 195 GLY A 222 GLY A 223 SITE 4 AC1 21 VAL A 226 CYS A 249 GLY A 250 GLY A 251 SITE 5 AC1 21 GLY A 272 THR A 273 HOH A 351 HOH A 359 SITE 6 AC1 21 HOH A 375 SITE 1 AC2 4 ILE A 203 HOH A 428 HOH A 508 LEU B 231 SITE 1 AC3 19 ALA B 19 ALA B 20 GLY B 21 LYS B 44 SITE 2 AC3 19 SER B 45 ASN B 68 ASN B 128 LYS B 165 SITE 3 AC3 19 ILE B 194 ASN B 195 GLY B 223 CYS B 249 SITE 4 AC3 19 GLY B 250 GLY B 251 GLY B 272 THR B 273 SITE 5 AC3 19 HOH B 337 HOH B 338 HOH B 340 SITE 1 AC4 5 LEU A 231 HOH A 455 VAL B 202 ILE B 203 SITE 2 AC4 5 HOH B 483 CRYST1 143.664 143.664 69.750 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006961 0.004019 0.000000 0.00000 SCALE2 0.000000 0.008038 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014337 0.00000