HEADER DE NOVO PROTEIN 22-APR-09 3H5G TITLE SWITCHING THE CHIRALITY OF THE METAL ENVIRONMENT ALTERS THE TITLE 2 COORDINATION MODE IN DESIGNED PEPTIDES. COMPND MOL_ID: 1; COMPND 2 MOLECULE: COIL SER L16D-PEN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHETIC CONSTRUCT KEYWDS DE-NOVO PROTEIN, PARALLEL THREE-STRANDED COILED COIL, D- KEYWDS 2 PENICILLAMINE, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.F.A.PEACOCK,J.A.STUCKEY,V.L.PECORARO REVDAT 6 22-NOV-23 3H5G 1 REMARK REVDAT 5 06-SEP-23 3H5G 1 REMARK LINK REVDAT 4 01-NOV-17 3H5G 1 REMARK REVDAT 3 13-JUL-11 3H5G 1 VERSN REVDAT 2 29-SEP-09 3H5G 1 JRNL REVDAT 1 14-JUL-09 3H5G 0 JRNL AUTH A.F.PEACOCK,J.A.STUCKEY,V.L.PECORARO JRNL TITL SWITCHING THE CHIRALITY OF THE METAL ENVIRONMENT ALTERS THE JRNL TITL 2 COORDINATION MODE IN DESIGNED PEPTIDES. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 48 7371 2009 JRNL REFN ISSN 1433-7851 JRNL PMID 19579245 JRNL DOI 10.1002/ANIE.200902166 REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 9085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 440 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 566 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.1680 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 708 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.118 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.117 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.925 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 709 ; 0.011 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 485 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 951 ; 1.143 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1193 ; 0.907 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 88 ; 4.058 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 26 ;34.102 ;27.308 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 140 ;14.025 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 106 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 740 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 112 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 199 ; 0.245 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 458 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 343 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 357 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 33 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 8 ; 0.263 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.153 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.293 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 4 ; 0.112 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 592 ; 0.883 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 179 ; 0.214 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 692 ; 1.090 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 347 ; 2.249 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 257 ; 2.996 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 9 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7287 4.9139 15.1250 REMARK 3 T TENSOR REMARK 3 T11: -0.0484 T22: 0.0700 REMARK 3 T33: -0.0439 T12: -0.0110 REMARK 3 T13: -0.0449 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 28.4036 L22: 8.8524 REMARK 3 L33: 22.1737 L12: 8.2995 REMARK 3 L13: -21.7912 L23: -4.8026 REMARK 3 S TENSOR REMARK 3 S11: 0.7487 S12: -0.4509 S13: 0.3276 REMARK 3 S21: 0.4325 S22: -0.1902 S23: -0.0753 REMARK 3 S31: -0.1578 S32: 0.3946 S33: -0.5585 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 21 REMARK 3 ORIGIN FOR THE GROUP (A): 7.9616 2.6929 4.4779 REMARK 3 T TENSOR REMARK 3 T11: -0.0692 T22: -0.0282 REMARK 3 T33: -0.0102 T12: -0.0019 REMARK 3 T13: 0.0049 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 31.7154 L22: 5.0057 REMARK 3 L33: 19.0749 L12: -7.8186 REMARK 3 L13: -22.2594 L23: 5.1428 REMARK 3 S TENSOR REMARK 3 S11: 0.2509 S12: 0.3175 S13: 0.1327 REMARK 3 S21: -0.0586 S22: -0.1355 S23: 0.3015 REMARK 3 S31: -0.1840 S32: -0.6072 S33: -0.1153 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 29 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0955 -0.8395 -2.0178 REMARK 3 T TENSOR REMARK 3 T11: -0.0819 T22: -0.0785 REMARK 3 T33: -0.0328 T12: -0.0028 REMARK 3 T13: 0.0054 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 24.0965 L22: 11.4218 REMARK 3 L33: 15.0679 L12: 0.0502 REMARK 3 L13: -6.8297 L23: 5.1587 REMARK 3 S TENSOR REMARK 3 S11: 0.0827 S12: -0.2694 S13: -0.0239 REMARK 3 S21: -0.0698 S22: -0.0498 S23: -0.5050 REMARK 3 S31: -0.1366 S32: 0.4602 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 5 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2345 -4.1209 22.1112 REMARK 3 T TENSOR REMARK 3 T11: -0.0237 T22: 0.0710 REMARK 3 T33: -0.0548 T12: 0.0100 REMARK 3 T13: 0.0132 T23: 0.0689 REMARK 3 L TENSOR REMARK 3 L11: 27.0070 L22: 12.1217 REMARK 3 L33: 51.4793 L12: 2.2989 REMARK 3 L13: -17.6227 L23: -6.1564 REMARK 3 S TENSOR REMARK 3 S11: 0.2951 S12: 1.3052 S13: 0.9601 REMARK 3 S21: -0.2925 S22: 0.2669 S23: 0.4809 REMARK 3 S31: -1.1531 S32: -0.4430 S33: -0.5620 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 14 REMARK 3 ORIGIN FOR THE GROUP (A): 4.6614 -1.2408 18.7098 REMARK 3 T TENSOR REMARK 3 T11: -0.0280 T22: 0.1459 REMARK 3 T33: -0.0667 T12: -0.0342 REMARK 3 T13: 0.0511 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 54.9053 L22: 9.3712 REMARK 3 L33: 15.6087 L12: 16.0136 REMARK 3 L13: -14.2987 L23: -7.2875 REMARK 3 S TENSOR REMARK 3 S11: 0.5446 S12: -0.8182 S13: 0.5518 REMARK 3 S21: 0.2569 S22: -0.1580 S23: 0.1012 REMARK 3 S31: -0.4311 S32: -0.2858 S33: -0.3867 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 29 REMARK 3 ORIGIN FOR THE GROUP (A): 20.9125 2.3782 9.9103 REMARK 3 T TENSOR REMARK 3 T11: 0.0039 T22: -0.0906 REMARK 3 T33: -0.0672 T12: -0.0728 REMARK 3 T13: -0.0144 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 22.2639 L22: 7.4020 REMARK 3 L33: 11.9302 L12: 7.9637 REMARK 3 L13: -11.3355 L23: -7.1912 REMARK 3 S TENSOR REMARK 3 S11: 0.2987 S12: -0.2252 S13: -0.4530 REMARK 3 S21: 0.4859 S22: -0.3206 S23: -0.1743 REMARK 3 S31: -0.3100 S32: 0.0124 S33: 0.0219 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 5 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0589 -4.2366 12.8004 REMARK 3 T TENSOR REMARK 3 T11: -0.0353 T22: -0.0501 REMARK 3 T33: -0.0382 T12: -0.0295 REMARK 3 T13: 0.0187 T23: -0.0520 REMARK 3 L TENSOR REMARK 3 L11: 34.4289 L22: 17.2253 REMARK 3 L33: 11.3002 L12: 3.4383 REMARK 3 L13: -5.0875 L23: 4.8795 REMARK 3 S TENSOR REMARK 3 S11: -0.9395 S12: -0.6859 S13: -0.1471 REMARK 3 S21: 0.5626 S22: 0.2711 S23: -0.1050 REMARK 3 S31: -0.3170 S32: 0.0860 S33: 0.6684 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 17 REMARK 3 ORIGIN FOR THE GROUP (A): 2.4167 -6.8535 9.1831 REMARK 3 T TENSOR REMARK 3 T11: -0.0864 T22: -0.0604 REMARK 3 T33: 0.0252 T12: -0.0483 REMARK 3 T13: 0.0569 T23: -0.0428 REMARK 3 L TENSOR REMARK 3 L11: 55.9911 L22: 4.2709 REMARK 3 L33: 4.3203 L12: -3.0046 REMARK 3 L13: -11.2767 L23: 1.1358 REMARK 3 S TENSOR REMARK 3 S11: -0.1791 S12: 0.1070 S13: -1.0563 REMARK 3 S21: 0.1778 S22: -0.1463 S23: 0.3562 REMARK 3 S31: 0.2476 S32: -0.2454 S33: 0.3255 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 18 C 29 REMARK 3 ORIGIN FOR THE GROUP (A): 20.7782 -7.5045 6.1191 REMARK 3 T TENSOR REMARK 3 T11: -0.0713 T22: -0.1200 REMARK 3 T33: -0.0696 T12: 0.0031 REMARK 3 T13: -0.0131 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 27.9110 L22: 7.5867 REMARK 3 L33: 7.1361 L12: -2.3683 REMARK 3 L13: -1.4592 L23: 0.0353 REMARK 3 S TENSOR REMARK 3 S11: -0.0566 S12: -0.3162 S13: -0.0976 REMARK 3 S21: 0.3879 S22: 0.0516 S23: -0.0635 REMARK 3 S31: -0.1157 S32: 0.0510 S33: 0.0050 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H5G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052715. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9096 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 54.0260 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.18700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.1 REMARK 200 STARTING MODEL: 2JGO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 200, 5% PEG 3000, PH 6.0, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.36150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 14.61850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.36150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.61850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 46 LIES ON A SPECIAL POSITION. REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 1 CB CG CD OE1 OE2 REMARK 480 LYS A 15 CD CE NZ REMARK 480 GLN A 17 CD OE1 NE2 REMARK 480 LYS B 15 CD CE NZ REMARK 480 GLN B 17 CD OE1 NE2 REMARK 480 LYS C 15 CD CE NZ REMARK 480 GLN C 17 CD OE1 NE2 REMARK 480 GLU C 20 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ZN ZN A 32 O HOH C 35 1.55 REMARK 500 ZN ZN A 35 O HOH A 41 1.57 REMARK 500 NZ LYS C 15 O HOH C 45 1.66 REMARK 500 OE1 GLU A 1 O HOH A 51 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU C 24 O HOH C 35 3545 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 15 CG LYS A 15 CD 0.205 REMARK 500 GLU C 20 CG GLU C 20 CD 0.322 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 1 N - CA - CB ANGL. DEV. = -18.3 DEGREES REMARK 500 GLU C 20 CB - CG - CD ANGL. DEV. = -24.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEI B 16 -60.70 -39.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 33 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 6 OE1 REMARK 620 2 GLU C 1 OE2 105.3 REMARK 620 3 HOH C 56 O 111.9 91.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 34 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 24 OE2 REMARK 620 2 HOH A 41 O 115.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 35 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 24 OE1 REMARK 620 2 GLU A 24 OE2 64.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 33 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 34 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 35 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 32 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JGO RELATED DB: PDB REMARK 900 ARSENATED COIL SER L9C REMARK 900 RELATED ID: 1COS RELATED DB: PDB REMARK 900 ANTIPARALLEL COIL SER REMARK 900 RELATED ID: 1COI RELATED DB: PDB REMARK 900 PARALLEL THREE STRANDED COILED COIL VALD REMARK 900 RELATED ID: 3H5F RELATED DB: PDB DBREF 3H5G A 0 30 PDB 3H5G 3H5G 0 30 DBREF 3H5G B 0 30 PDB 3H5G 3H5G 0 30 DBREF 3H5G C 0 30 PDB 3H5G 3H5G 0 30 SEQRES 1 A 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LEU ALA ALA LEU SEQRES 2 A 31 GLU SER LYS LEI GLN ALA LEU GLU LYS LYS LEU GLU ALA SEQRES 3 A 31 LEU GLU HIS GLY NH2 SEQRES 1 B 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LEU ALA ALA LEU SEQRES 2 B 31 GLU SER LYS LEI GLN ALA LEU GLU LYS LYS LEU GLU ALA SEQRES 3 B 31 LEU GLU HIS GLY NH2 SEQRES 1 C 31 ACE GLU TRP GLU ALA LEU GLU LYS LYS LEU ALA ALA LEU SEQRES 2 C 31 GLU SER LYS LEI GLN ALA LEU GLU LYS LYS LEU GLU ALA SEQRES 3 C 31 LEU GLU HIS GLY NH2 HET ACE A 0 3 HET LEI A 16 8 HET NH2 A 30 1 HET ACE B 0 3 HET LEI B 16 8 HET NH2 B 30 1 HET ACE C 0 3 HET LEI C 16 8 HET NH2 C 30 1 HET ZN A 31 1 HET ZN A 32 1 HET ZN A 33 1 HET ZN A 34 1 HET ZN A 35 1 HET ZN B 31 1 HET ZN C 31 1 HET ACT C 32 4 HETNAM ACE ACETYL GROUP HETNAM LEI 3-SULFANYL-D-VALINE HETNAM NH2 AMINO GROUP HETNAM ZN ZINC ION HETNAM ACT ACETATE ION HETSYN LEI D-PENICILLAMINE FORMUL 1 ACE 3(C2 H4 O) FORMUL 1 LEI 3(C5 H11 N O2 S) FORMUL 1 NH2 3(H2 N) FORMUL 4 ZN 7(ZN 2+) FORMUL 11 ACT C2 H3 O2 1- FORMUL 12 HOH *57(H2 O) HELIX 1 1 GLU A 1 HIS A 28 1 28 HELIX 2 2 GLU B 1 GLY B 29 1 29 HELIX 3 3 GLU C 1 HIS C 28 1 28 LINK C ACE A 0 N GLU A 1 1555 1555 1.34 LINK C LYS A 15 N LEI A 16 1555 1555 1.33 LINK C LEI A 16 N GLN A 17 1555 1555 1.33 LINK C GLY A 29 N NH2 A 30 1555 1555 1.28 LINK C ACE B 0 N GLU B 1 1555 1555 1.32 LINK C LYS B 15 N LEI B 16 1555 1555 1.33 LINK C LEI B 16 N GLN B 17 1555 1555 1.33 LINK C GLY B 29 N NH2 B 30 1555 1555 1.26 LINK C ACE C 0 N GLU C 1 1555 1555 1.32 LINK C LYS C 15 N LEI C 16 1555 1555 1.33 LINK C LEI C 16 N GLN C 17 1555 1555 1.33 LINK C GLY C 29 N NH2 C 30 1555 1555 1.28 LINK OE1 GLU A 6 ZN ZN A 33 1555 1555 2.01 LINK OE2 GLU A 24 ZN A ZN A 34 1555 1555 2.06 LINK OE1 GLU A 24 ZN B ZN A 35 1555 1555 2.28 LINK OE2 GLU A 24 ZN B ZN A 35 1555 1555 1.83 LINK NE2 HIS A 28 ZN ZN A 31 1555 1555 1.97 LINK ZN ZN A 33 OE2 GLU C 1 1555 1555 1.78 LINK ZN ZN A 33 O HOH C 56 1555 1555 1.89 LINK ZN A ZN A 34 O HOH A 41 1555 1555 1.91 LINK OE2 GLU C 6 ZN ZN C 31 1555 1555 2.21 SITE 1 AC1 4 HIS A 28 GLU B 3 GLU B 20 GLU B 24 SITE 1 AC2 3 GLU C 24 GLU C 27 HOH C 35 SITE 1 AC3 5 TRP A 2 GLU A 6 GLU C 1 HIS C 28 SITE 2 AC3 5 HOH C 56 SITE 1 AC4 5 GLU A 24 HOH A 41 GLU B 24 GLU B 27 SITE 2 AC4 5 HIS B 28 SITE 1 AC5 6 GLU A 24 GLU A 27 HOH A 41 GLU B 24 SITE 2 AC5 6 HIS B 28 LYS C 22 SITE 1 AC6 2 GLU B 6 HOH B 57 SITE 1 AC7 5 GLU B 1 HOH B 55 TRP C 2 GLU C 6 SITE 2 AC7 5 HOH C 42 SITE 1 AC8 3 HIS B 28 ACE C 0 GLU C 1 CRYST1 76.723 29.237 44.385 90.00 119.60 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013034 0.000000 0.007404 0.00000 SCALE2 0.000000 0.034203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025912 0.00000 HETATM 1 C ACE A 0 -8.277 8.474 19.379 1.00 36.18 C HETATM 2 O ACE A 0 -7.422 8.515 18.496 1.00 37.16 O HETATM 3 CH3 ACE A 0 -9.357 9.509 19.450 1.00 36.61 C