HEADER CHAPERONE 28-APR-09 3H84 TITLE CRYSTAL STRUCTURE OF GET3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATPASE GET3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ARSENICAL PUMP-DRIVING ATPASE, ARSENITE-TRANSLOCATING COMPND 5 ATPASE, ARSENICAL RESISTANCE ATPASE, ARSENITE-TRANSPORTING ATPASE, COMPND 6 GOLGI TO ER TRAFFIC PROTEIN 3; COMPND 7 EC: 3.6.3.16; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST,LAGER BEER YEAST,YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: GET3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28B KEYWDS BETA-ALPHA-BARRELS, ARSENICAL RESISTANCE, ATP-BINDING, ENDOPLASMIC KEYWDS 2 RETICULUM, ER-GOLGI TRANSPORT, GOLGI APPARATUS, HYDROLASE, KEYWDS 3 NUCLEOTIDE-BINDING, TRANSPORT, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR J.HU,J.LI,X.QIAN,B.SHA REVDAT 3 21-FEB-24 3H84 1 REMARK LINK REVDAT 2 13-JUL-11 3H84 1 VERSN REVDAT 1 22-DEC-09 3H84 0 JRNL AUTH J.HU,J.LI,X.QIAN,V.DENIC,B.SHA JRNL TITL THE CRYSTAL STRUCTURES OF YEAST GET3 SUGGEST A MECHANISM FOR JRNL TITL 2 TAIL-ANCHORED PROTEIN MEMBRANE INSERTION. JRNL REF PLOS ONE V. 4 E8061 2009 JRNL REFN ESSN 1932-6203 JRNL PMID 19956640 JRNL DOI 10.1371/JOURNAL.PONE.0008061 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.200 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 51794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2763 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3567 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 204 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5073 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 324 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 47.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.92000 REMARK 3 B22 (A**2) : -0.94000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.220 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.552 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5157 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6957 ; 1.106 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 645 ; 5.353 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 239 ;39.801 ;25.941 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 950 ;17.494 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;18.695 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 791 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3836 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2414 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3553 ; 0.294 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 289 ; 0.120 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 69 ; 0.156 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.092 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3215 ; 0.416 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5186 ; 0.786 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1973 ; 0.926 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1771 ; 1.522 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 348 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2724 16.9678 16.4731 REMARK 3 T TENSOR REMARK 3 T11: -0.1153 T22: -0.2129 REMARK 3 T33: -0.2717 T12: 0.0200 REMARK 3 T13: 0.0039 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 2.2599 L22: 1.8485 REMARK 3 L33: 2.1980 L12: 1.2279 REMARK 3 L13: -0.6035 L23: -0.5898 REMARK 3 S TENSOR REMARK 3 S11: 0.0615 S12: -0.1627 S13: 0.0327 REMARK 3 S21: 0.1913 S22: -0.0091 S23: -0.0596 REMARK 3 S31: 0.0763 S32: -0.1896 S33: -0.0524 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 350 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6263 -13.2540 -3.4789 REMARK 3 T TENSOR REMARK 3 T11: -0.1391 T22: -0.1955 REMARK 3 T33: 0.1735 T12: 0.0391 REMARK 3 T13: 0.0474 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 2.2464 L22: 2.6540 REMARK 3 L33: 2.0682 L12: -1.0853 REMARK 3 L13: -0.2599 L23: 0.4372 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: 0.0764 S13: 0.0753 REMARK 3 S21: -0.0494 S22: 0.0323 S23: 0.6784 REMARK 3 S31: -0.2181 S32: -0.3732 S33: -0.0530 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H84 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.07600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 32.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.58600 REMARK 200 R SYM FOR SHELL (I) : 0.58600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 4K, 0.2M AMMONIUM SULFATE, 20% REMARK 280 ETHYLENE GLYCOL, 0.1% N-OCTYL-[BETA]-D-GLUCOPYRANOSIDE, PH 6.0, REMARK 280 EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 109.70000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.87150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 109.70000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.87150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -267.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 LEU A 3 REMARK 465 THR A 4 REMARK 465 GLY A 191 REMARK 465 GLU A 192 REMARK 465 ILE A 193 REMARK 465 THR A 194 REMARK 465 ASN A 195 REMARK 465 LYS A 196 REMARK 465 LEU A 197 REMARK 465 GLY A 198 REMARK 465 PRO A 199 REMARK 465 MET A 200 REMARK 465 LEU A 201 REMARK 465 ASN A 202 REMARK 465 SER A 203 REMARK 465 PHE A 204 REMARK 465 MET A 205 REMARK 465 GLY A 206 REMARK 465 ALA A 207 REMARK 465 GLY A 208 REMARK 465 ASN A 209 REMARK 465 VAL A 210 REMARK 465 GLU A 351 REMARK 465 ASP A 352 REMARK 465 LYS A 353 REMARK 465 GLU A 354 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 LEU B 3 REMARK 465 THR B 4 REMARK 465 ALA B 93 REMARK 465 LEU B 94 REMARK 465 LYS B 95 REMARK 465 ASP B 96 REMARK 465 MET B 97 REMARK 465 ASN B 98 REMARK 465 ASP B 99 REMARK 465 MET B 100 REMARK 465 ALA B 101 REMARK 465 VAL B 102 REMARK 465 SER B 103 REMARK 465 ARG B 104 REMARK 465 ALA B 105 REMARK 465 ASN B 106 REMARK 465 ASN B 107 REMARK 465 ASN B 108 REMARK 465 GLY B 109 REMARK 465 SER B 110 REMARK 465 ASP B 111 REMARK 465 GLY B 112 REMARK 465 GLN B 113 REMARK 465 GLY B 114 REMARK 465 ASP B 115 REMARK 465 ASP B 116 REMARK 465 ASP B 352 REMARK 465 LYS B 353 REMARK 465 GLU B 354 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 113 -13.98 54.71 REMARK 500 ASP A 115 149.28 69.36 REMARK 500 ASP A 116 -54.30 -141.12 REMARK 500 GLU A 153 24.14 -74.05 REMARK 500 GLN A 154 -121.86 32.46 REMARK 500 GLU A 156 -165.44 -70.16 REMARK 500 HIS A 172 71.43 -111.93 REMARK 500 LYS A 189 -81.33 -72.66 REMARK 500 ASN A 267 27.58 -145.17 REMARK 500 ASN A 279 -159.46 -85.68 REMARK 500 ASP A 280 -85.71 49.78 REMARK 500 GLN A 281 -97.28 -62.12 REMARK 500 GLU A 282 -90.92 167.08 REMARK 500 CYS A 285 98.90 66.06 REMARK 500 TYR A 306 55.40 -118.88 REMARK 500 ILE A 321 89.16 69.20 REMARK 500 GLU B 156 77.65 51.21 REMARK 500 ILE B 212 17.59 40.02 REMARK 500 ASN B 267 23.06 -142.88 REMARK 500 GLU B 282 64.35 86.96 REMARK 500 HIS B 283 -130.07 -68.18 REMARK 500 ASN B 284 -161.68 57.26 REMARK 500 CYS B 285 98.35 56.16 REMARK 500 ALA B 318 -70.77 -51.51 REMARK 500 TYR B 348 26.67 -76.74 REMARK 500 GLU B 349 -11.45 -141.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 355 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 285 SG REMARK 620 2 CYS A 288 SG 118.7 REMARK 620 3 CYS B 285 SG 103.2 104.8 REMARK 620 4 CYS B 288 SG 96.7 115.8 117.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 358 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 359 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 356 DBREF 3H84 A 1 354 UNP Q12154 GET3_YEAST 1 354 DBREF 3H84 B 1 354 UNP Q12154 GET3_YEAST 1 354 SEQRES 1 A 354 MET ASP LEU THR VAL GLU PRO ASN LEU HIS SER LEU ILE SEQRES 2 A 354 THR SER THR THR HIS LYS TRP ILE PHE VAL GLY GLY LYS SEQRES 3 A 354 GLY GLY VAL GLY LYS THR THR SER SER CYS SER ILE ALA SEQRES 4 A 354 ILE GLN MET ALA LEU SER GLN PRO ASN LYS GLN PHE LEU SEQRES 5 A 354 LEU ILE SER THR ASP PRO ALA HIS ASN LEU SER ASP ALA SEQRES 6 A 354 PHE GLY GLU LYS PHE GLY LYS ASP ALA ARG LYS VAL THR SEQRES 7 A 354 GLY MET ASN ASN LEU SER CYS MET GLU ILE ASP PRO SER SEQRES 8 A 354 ALA ALA LEU LYS ASP MET ASN ASP MET ALA VAL SER ARG SEQRES 9 A 354 ALA ASN ASN ASN GLY SER ASP GLY GLN GLY ASP ASP LEU SEQRES 10 A 354 GLY SER LEU LEU GLN GLY GLY ALA LEU ALA ASP LEU THR SEQRES 11 A 354 GLY SER ILE PRO GLY ILE ASP GLU ALA LEU SER PHE MET SEQRES 12 A 354 GLU VAL MET LYS HIS ILE LYS ARG GLN GLU GLN GLY GLU SEQRES 13 A 354 GLY GLU THR PHE ASP THR VAL ILE PHE ASP THR ALA PRO SEQRES 14 A 354 THR GLY HIS THR LEU ARG PHE LEU GLN LEU PRO ASN THR SEQRES 15 A 354 LEU SER LYS LEU LEU GLU LYS PHE GLY GLU ILE THR ASN SEQRES 16 A 354 LYS LEU GLY PRO MET LEU ASN SER PHE MET GLY ALA GLY SEQRES 17 A 354 ASN VAL ASP ILE SER GLY LYS LEU ASN GLU LEU LYS ALA SEQRES 18 A 354 ASN VAL GLU THR ILE ARG GLN GLN PHE THR ASP PRO ASP SEQRES 19 A 354 LEU THR THR PHE VAL CYS VAL CYS ILE SER GLU PHE LEU SEQRES 20 A 354 SER LEU TYR GLU THR GLU ARG LEU ILE GLN GLU LEU ILE SEQRES 21 A 354 SER TYR ASP MET ASP VAL ASN SER ILE ILE VAL ASN GLN SEQRES 22 A 354 LEU LEU PHE ALA GLU ASN ASP GLN GLU HIS ASN CYS LYS SEQRES 23 A 354 ARG CYS GLN ALA ARG TRP LYS MET GLN LYS LYS TYR LEU SEQRES 24 A 354 ASP GLN ILE ASP GLU LEU TYR GLU ASP PHE HIS VAL VAL SEQRES 25 A 354 LYS MET PRO LEU CYS ALA GLY GLU ILE ARG GLY LEU ASN SEQRES 26 A 354 ASN LEU THR LYS PHE SER GLN PHE LEU ASN LYS GLU TYR SEQRES 27 A 354 ASN PRO ILE THR ASP GLY LYS VAL ILE TYR GLU LEU GLU SEQRES 28 A 354 ASP LYS GLU SEQRES 1 B 354 MET ASP LEU THR VAL GLU PRO ASN LEU HIS SER LEU ILE SEQRES 2 B 354 THR SER THR THR HIS LYS TRP ILE PHE VAL GLY GLY LYS SEQRES 3 B 354 GLY GLY VAL GLY LYS THR THR SER SER CYS SER ILE ALA SEQRES 4 B 354 ILE GLN MET ALA LEU SER GLN PRO ASN LYS GLN PHE LEU SEQRES 5 B 354 LEU ILE SER THR ASP PRO ALA HIS ASN LEU SER ASP ALA SEQRES 6 B 354 PHE GLY GLU LYS PHE GLY LYS ASP ALA ARG LYS VAL THR SEQRES 7 B 354 GLY MET ASN ASN LEU SER CYS MET GLU ILE ASP PRO SER SEQRES 8 B 354 ALA ALA LEU LYS ASP MET ASN ASP MET ALA VAL SER ARG SEQRES 9 B 354 ALA ASN ASN ASN GLY SER ASP GLY GLN GLY ASP ASP LEU SEQRES 10 B 354 GLY SER LEU LEU GLN GLY GLY ALA LEU ALA ASP LEU THR SEQRES 11 B 354 GLY SER ILE PRO GLY ILE ASP GLU ALA LEU SER PHE MET SEQRES 12 B 354 GLU VAL MET LYS HIS ILE LYS ARG GLN GLU GLN GLY GLU SEQRES 13 B 354 GLY GLU THR PHE ASP THR VAL ILE PHE ASP THR ALA PRO SEQRES 14 B 354 THR GLY HIS THR LEU ARG PHE LEU GLN LEU PRO ASN THR SEQRES 15 B 354 LEU SER LYS LEU LEU GLU LYS PHE GLY GLU ILE THR ASN SEQRES 16 B 354 LYS LEU GLY PRO MET LEU ASN SER PHE MET GLY ALA GLY SEQRES 17 B 354 ASN VAL ASP ILE SER GLY LYS LEU ASN GLU LEU LYS ALA SEQRES 18 B 354 ASN VAL GLU THR ILE ARG GLN GLN PHE THR ASP PRO ASP SEQRES 19 B 354 LEU THR THR PHE VAL CYS VAL CYS ILE SER GLU PHE LEU SEQRES 20 B 354 SER LEU TYR GLU THR GLU ARG LEU ILE GLN GLU LEU ILE SEQRES 21 B 354 SER TYR ASP MET ASP VAL ASN SER ILE ILE VAL ASN GLN SEQRES 22 B 354 LEU LEU PHE ALA GLU ASN ASP GLN GLU HIS ASN CYS LYS SEQRES 23 B 354 ARG CYS GLN ALA ARG TRP LYS MET GLN LYS LYS TYR LEU SEQRES 24 B 354 ASP GLN ILE ASP GLU LEU TYR GLU ASP PHE HIS VAL VAL SEQRES 25 B 354 LYS MET PRO LEU CYS ALA GLY GLU ILE ARG GLY LEU ASN SEQRES 26 B 354 ASN LEU THR LYS PHE SER GLN PHE LEU ASN LYS GLU TYR SEQRES 27 B 354 ASN PRO ILE THR ASP GLY LYS VAL ILE TYR GLU LEU GLU SEQRES 28 B 354 ASP LYS GLU HET ZN A 355 1 HET MG A 356 1 HET NA A 357 1 HET NA A 358 1 HET NA A 359 1 HET MG B 355 1 HET CL B 356 1 HET CL B 357 1 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 3 ZN ZN 2+ FORMUL 4 MG 2(MG 2+) FORMUL 5 NA 3(NA 1+) FORMUL 9 CL 2(CL 1-) FORMUL 11 HOH *324(H2 O) HELIX 1 1 LEU A 9 THR A 14 1 6 HELIX 2 2 GLY A 30 GLN A 46 1 17 HELIX 3 3 HIS A 60 GLY A 67 1 8 HELIX 4 4 ASP A 89 ASN A 107 1 19 HELIX 5 5 ASP A 116 LEU A 121 1 6 HELIX 6 6 GLN A 122 ALA A 125 5 4 HELIX 7 7 LEU A 126 THR A 130 5 5 HELIX 8 8 GLY A 135 GLU A 153 1 19 HELIX 9 9 LEU A 174 LEU A 177 5 4 HELIX 10 10 GLN A 178 PHE A 190 1 13 HELIX 11 11 ASP A 211 THR A 231 1 21 HELIX 12 12 GLU A 245 TYR A 262 1 18 HELIX 13 13 CYS A 285 TYR A 306 1 22 HELIX 14 14 ARG A 322 GLN A 332 1 11 HELIX 15 15 PHE A 333 ASN A 335 5 3 HELIX 16 16 ASN A 339 LEU A 350 1 12 HELIX 17 17 LEU B 9 THR B 14 1 6 HELIX 18 18 GLY B 30 GLN B 46 1 17 HELIX 19 19 HIS B 60 GLY B 67 1 8 HELIX 20 20 GLY B 118 ILE B 133 1 16 HELIX 21 21 GLY B 135 GLY B 155 1 21 HELIX 22 22 LEU B 174 LEU B 177 5 4 HELIX 23 23 GLN B 178 ASN B 195 1 18 HELIX 24 24 PRO B 199 GLY B 206 1 8 HELIX 25 25 ILE B 212 THR B 231 1 20 HELIX 26 26 GLU B 245 TYR B 262 1 18 HELIX 27 27 CYS B 285 TYR B 306 1 22 HELIX 28 28 GLY B 323 LYS B 336 1 14 HELIX 29 29 ASN B 339 TYR B 348 1 10 SHEET 1 A 8 ARG A 75 LYS A 76 0 SHEET 2 A 8 LEU A 83 GLU A 87 -1 O CYS A 85 N ARG A 75 SHEET 3 A 8 PHE A 51 SER A 55 1 N LEU A 53 O SER A 84 SHEET 4 A 8 THR A 162 ASP A 166 1 O ILE A 164 N LEU A 52 SHEET 5 A 8 TRP A 20 GLY A 24 1 N ILE A 21 O PHE A 165 SHEET 6 A 8 THR A 236 ILE A 243 1 O VAL A 239 N PHE A 22 SHEET 7 A 8 SER A 268 LEU A 274 1 O ILE A 270 N CYS A 242 SHEET 8 A 8 HIS A 310 PRO A 315 1 O MET A 314 N VAL A 271 SHEET 1 B 8 ARG B 75 LYS B 76 0 SHEET 2 B 8 LEU B 83 GLU B 87 -1 O CYS B 85 N ARG B 75 SHEET 3 B 8 PHE B 51 SER B 55 1 N LEU B 53 O SER B 84 SHEET 4 B 8 THR B 162 ASP B 166 1 O ILE B 164 N LEU B 52 SHEET 5 B 8 TRP B 20 GLY B 24 1 N ILE B 21 O PHE B 165 SHEET 6 B 8 THR B 236 ILE B 243 1 O VAL B 239 N PHE B 22 SHEET 7 B 8 SER B 268 LEU B 274 1 O ILE B 270 N CYS B 242 SHEET 8 B 8 HIS B 310 PRO B 315 1 O MET B 314 N VAL B 271 LINK SG CYS A 285 ZN ZN A 355 1555 1555 2.43 LINK SG CYS A 288 ZN ZN A 355 1555 1555 2.55 LINK ZN ZN A 355 SG CYS B 285 1555 1555 2.34 LINK ZN ZN A 355 SG CYS B 288 1555 1555 2.44 CISPEP 1 ASP A 115 ASP A 116 0 -6.91 CISPEP 2 LYS A 189 PHE A 190 0 -2.36 CISPEP 3 GLY B 157 GLU B 158 0 -6.55 CISPEP 4 GLY B 198 PRO B 199 0 0.54 SITE 1 AC1 4 CYS A 285 CYS A 288 CYS B 285 CYS B 288 SITE 1 AC2 3 ILE A 54 THR A 56 ASP A 166 SITE 1 AC3 2 LEU A 174 GLU A 258 SITE 1 AC4 1 THR B 32 SITE 1 AC5 1 ASP B 166 CRYST1 219.400 113.743 48.370 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004558 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008792 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020674 0.00000