HEADER TRANSFERASE 29-APR-09 3H8V TITLE HUMAN UBIQUITIN-ACTIVATING ENZYME 5 IN COMPLEX WITH ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 57-329; COMPND 5 SYNONYM: UBIQUITIN-ACTIVATING ENZYME 5, UBIQUITIN-ACTIVATING ENZYME COMPND 6 E1 DOMAIN-CONTAINING PROTEIN 1, UFM1-ACTIVATING ENZYME, THIFP1; COMPND 7 EC: 2.7.7.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBA5, UBE1DC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-LIC KEYWDS ROSSMANN FOLD, ATP-BINDING, UBL CONJUGATION PATHWAY, TRANSFERASE, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,J.P.BACIK,N.RASTGOO,J.WEIGELT,C.BOUNTRA,A.M.EDWARDS, AUTHOR 2 C.H.ARROWSMITH,A.BOCHKAREV,S.DHE-PAGANON,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 4 06-SEP-23 3H8V 1 REMARK REVDAT 3 12-NOV-14 3H8V 1 KEYWDS REVDAT 2 01-SEP-10 3H8V 1 JRNL REVDAT 1 26-MAY-09 3H8V 0 JRNL AUTH J.P.BACIK,J.R.WALKER,M.ALI,A.D.SCHIMMER,S.DHE-PAGANON JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN UBIQUITIN-ACTIVATING ENZYME 5 JRNL TITL 2 (UBA5) BOUND TO ATP: MECHANISTIC INSIGHTS INTO A JRNL TITL 3 MINIMALISTIC E1 ENZYME. JRNL REF J.BIOL.CHEM. V. 285 20273 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20368332 JRNL DOI 10.1074/JBC.M110.102921 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 3 NUMBER OF REFLECTIONS : 42909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2372 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3207 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3392 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.335 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3527 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4786 ; 1.251 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 455 ; 4.987 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;37.463 ;25.241 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 562 ;15.070 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;24.369 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 557 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2637 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 722 ; 0.701 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1164 ; 1.299 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 403 ; 2.113 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 363 ; 3.327 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3481 -25.5271 24.9718 REMARK 3 T TENSOR REMARK 3 T11: 0.3705 T22: 0.0854 REMARK 3 T33: 0.1636 T12: -0.0979 REMARK 3 T13: -0.0666 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 3.9488 L22: 3.2839 REMARK 3 L33: 3.8363 L12: 0.8434 REMARK 3 L13: -0.5958 L23: -0.0682 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: -0.2376 S13: -0.1487 REMARK 3 S21: 0.1226 S22: -0.0128 S23: 0.0527 REMARK 3 S31: 0.4322 S32: -0.0877 S33: -0.0291 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1762 -28.5942 22.6995 REMARK 3 T TENSOR REMARK 3 T11: 0.4152 T22: 0.0410 REMARK 3 T33: 0.2067 T12: -0.0568 REMARK 3 T13: -0.0652 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 4.9138 L22: 1.3428 REMARK 3 L33: 8.9804 L12: 1.0169 REMARK 3 L13: -0.4913 L23: 0.7884 REMARK 3 S TENSOR REMARK 3 S11: -0.0746 S12: -0.0451 S13: -0.1245 REMARK 3 S21: 0.0603 S22: 0.0922 S23: -0.2998 REMARK 3 S31: 0.3135 S32: 0.4107 S33: -0.0175 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 47.1867 -36.8595 21.2824 REMARK 3 T TENSOR REMARK 3 T11: 0.8127 T22: 0.5867 REMARK 3 T33: 0.5667 T12: 0.1617 REMARK 3 T13: -0.0794 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 8.7666 L22: 2.1660 REMARK 3 L33: 1.1875 L12: 0.2451 REMARK 3 L13: 0.1407 L23: -1.5722 REMARK 3 S TENSOR REMARK 3 S11: 0.5507 S12: 0.1404 S13: -0.6748 REMARK 3 S21: 0.0083 S22: -0.7115 S23: -0.3121 REMARK 3 S31: 0.1279 S32: 0.6294 S33: 0.1608 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 36.0681 -36.1478 24.8296 REMARK 3 T TENSOR REMARK 3 T11: 0.5555 T22: 0.1246 REMARK 3 T33: 0.3279 T12: 0.0173 REMARK 3 T13: -0.0355 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 9.4469 L22: 1.4392 REMARK 3 L33: 6.3356 L12: -0.5957 REMARK 3 L13: -4.4442 L23: 0.6632 REMARK 3 S TENSOR REMARK 3 S11: -0.2009 S12: -0.3013 S13: -0.3892 REMARK 3 S21: -0.1523 S22: 0.2436 S23: -0.3374 REMARK 3 S31: 0.7650 S32: 0.5273 S33: -0.0427 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3789 -28.3532 10.8234 REMARK 3 T TENSOR REMARK 3 T11: 0.4145 T22: 0.0861 REMARK 3 T33: 0.1794 T12: -0.1585 REMARK 3 T13: -0.0333 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 1.3718 L22: 1.3141 REMARK 3 L33: 3.7181 L12: 0.3145 REMARK 3 L13: -1.1577 L23: -0.7389 REMARK 3 S TENSOR REMARK 3 S11: -0.0978 S12: 0.1253 S13: -0.1332 REMARK 3 S21: -0.0177 S22: 0.1047 S23: 0.0001 REMARK 3 S31: 0.4378 S32: -0.1149 S33: -0.0069 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): 31.5739 -17.3939 14.4302 REMARK 3 T TENSOR REMARK 3 T11: 0.2836 T22: 0.0677 REMARK 3 T33: 0.1372 T12: -0.0989 REMARK 3 T13: -0.0481 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 3.2007 L22: 2.1130 REMARK 3 L33: 2.7041 L12: 0.6101 REMARK 3 L13: 0.1650 L23: 0.4933 REMARK 3 S TENSOR REMARK 3 S11: -0.1213 S12: 0.0819 S13: -0.1060 REMARK 3 S21: -0.1843 S22: 0.2144 S23: -0.0369 REMARK 3 S31: 0.1625 S32: -0.0568 S33: -0.0932 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 209 A 228 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2099 -9.5020 19.7821 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.0987 REMARK 3 T33: 0.1841 T12: -0.0757 REMARK 3 T13: -0.0301 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.4234 L22: 1.3222 REMARK 3 L33: 4.8445 L12: -0.9186 REMARK 3 L13: 1.9057 L23: -0.4687 REMARK 3 S TENSOR REMARK 3 S11: -0.1260 S12: 0.0194 S13: -0.0901 REMARK 3 S21: -0.1622 S22: 0.1991 S23: 0.0227 REMARK 3 S31: -0.2038 S32: 0.0601 S33: -0.0732 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 253 REMARK 3 ORIGIN FOR THE GROUP (A): 45.2275 -9.3078 23.0537 REMARK 3 T TENSOR REMARK 3 T11: 0.3568 T22: 0.2524 REMARK 3 T33: 0.2917 T12: -0.0680 REMARK 3 T13: -0.0570 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 0.4609 L22: 1.8405 REMARK 3 L33: 6.5102 L12: -0.9149 REMARK 3 L13: 1.2898 L23: -2.6579 REMARK 3 S TENSOR REMARK 3 S11: 0.0532 S12: 0.0886 S13: -0.0195 REMARK 3 S21: -0.0610 S22: -0.1396 S23: -0.0139 REMARK 3 S31: 0.0883 S32: 0.8307 S33: 0.0864 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 254 A 272 REMARK 3 ORIGIN FOR THE GROUP (A): 34.5314 -17.0950 30.0529 REMARK 3 T TENSOR REMARK 3 T11: 0.2601 T22: 0.1176 REMARK 3 T33: 0.1910 T12: -0.0349 REMARK 3 T13: -0.0250 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 9.7718 L22: 0.6175 REMARK 3 L33: 2.0802 L12: 0.2834 REMARK 3 L13: 1.3493 L23: 0.6517 REMARK 3 S TENSOR REMARK 3 S11: -0.1047 S12: 0.1801 S13: -0.0854 REMARK 3 S21: -0.0160 S22: 0.1236 S23: -0.0844 REMARK 3 S31: 0.1870 S32: 0.0191 S33: -0.0189 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 273 A 286 REMARK 3 ORIGIN FOR THE GROUP (A): 29.6853 -10.1539 28.8311 REMARK 3 T TENSOR REMARK 3 T11: 0.3010 T22: 0.1448 REMARK 3 T33: 0.2647 T12: -0.0521 REMARK 3 T13: -0.0609 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 0.4655 L22: 0.8623 REMARK 3 L33: 1.6447 L12: 0.0131 REMARK 3 L13: 0.8027 L23: 0.4028 REMARK 3 S TENSOR REMARK 3 S11: -0.0989 S12: -0.0694 S13: 0.1069 REMARK 3 S21: 0.0008 S22: 0.0027 S23: 0.0852 REMARK 3 S31: -0.0347 S32: -0.1769 S33: 0.0962 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 287 A 311 REMARK 3 ORIGIN FOR THE GROUP (A): 31.9927 -4.3531 16.9591 REMARK 3 T TENSOR REMARK 3 T11: 0.3482 T22: 0.0850 REMARK 3 T33: 0.1937 T12: -0.0516 REMARK 3 T13: -0.0548 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 1.3363 L22: 0.7335 REMARK 3 L33: 2.3809 L12: 0.2403 REMARK 3 L13: 0.3172 L23: 0.2422 REMARK 3 S TENSOR REMARK 3 S11: -0.1992 S12: 0.0100 S13: 0.0873 REMARK 3 S21: -0.2011 S22: 0.1668 S23: 0.0355 REMARK 3 S31: -0.2558 S32: -0.1974 S33: 0.0324 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 312 A 318 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2900 -3.7951 10.3281 REMARK 3 T TENSOR REMARK 3 T11: 0.4674 T22: 0.4419 REMARK 3 T33: 0.3944 T12: 0.0357 REMARK 3 T13: -0.2087 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 3.4646 L22: 6.2414 REMARK 3 L33: 9.5458 L12: -3.6730 REMARK 3 L13: 3.9490 L23: -0.7498 REMARK 3 S TENSOR REMARK 3 S11: 0.5539 S12: -0.2619 S13: -0.3836 REMARK 3 S21: -1.1406 S22: -0.0398 S23: 0.3561 REMARK 3 S31: -0.2369 S32: -0.7543 S33: -0.5141 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 70 B 89 REMARK 3 ORIGIN FOR THE GROUP (A): 60.3053 -21.3194 40.5459 REMARK 3 T TENSOR REMARK 3 T11: 0.4241 T22: 0.3427 REMARK 3 T33: 0.3176 T12: 0.2305 REMARK 3 T13: 0.0109 T23: -0.0603 REMARK 3 L TENSOR REMARK 3 L11: 4.0126 L22: 4.1258 REMARK 3 L33: 0.7032 L12: -0.9195 REMARK 3 L13: 0.1984 L23: -0.1646 REMARK 3 S TENSOR REMARK 3 S11: 0.1333 S12: 0.5151 S13: -0.0114 REMARK 3 S21: -0.5249 S22: -0.0716 S23: -0.5395 REMARK 3 S31: 0.3429 S32: 0.1908 S33: -0.0617 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 90 B 106 REMARK 3 ORIGIN FOR THE GROUP (A): 44.9238 -23.5225 46.5154 REMARK 3 T TENSOR REMARK 3 T11: 0.3074 T22: 0.0795 REMARK 3 T33: 0.2069 T12: 0.1230 REMARK 3 T13: -0.0547 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.9195 L22: 1.3810 REMARK 3 L33: 6.1271 L12: -0.3299 REMARK 3 L13: -0.7265 L23: -0.7156 REMARK 3 S TENSOR REMARK 3 S11: 0.0149 S12: 0.1157 S13: -0.0747 REMARK 3 S21: -0.1773 S22: 0.0813 S23: 0.2170 REMARK 3 S31: 0.1198 S32: -0.2309 S33: -0.0962 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 125 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4979 -39.5567 48.5273 REMARK 3 T TENSOR REMARK 3 T11: 0.7421 T22: 0.5974 REMARK 3 T33: 0.6478 T12: -0.1231 REMARK 3 T13: -0.0792 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 5.8594 L22: 2.6933 REMARK 3 L33: 9.3878 L12: 0.4151 REMARK 3 L13: -4.1927 L23: -2.2284 REMARK 3 S TENSOR REMARK 3 S11: -0.3474 S12: 1.0811 S13: -1.0186 REMARK 3 S21: -0.4255 S22: 0.4968 S23: 0.4695 REMARK 3 S31: 1.5984 S32: -1.7979 S33: -0.1494 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 141 B 170 REMARK 3 ORIGIN FOR THE GROUP (A): 46.6392 -34.6435 44.9426 REMARK 3 T TENSOR REMARK 3 T11: 0.5840 T22: 0.2951 REMARK 3 T33: 0.2864 T12: 0.0754 REMARK 3 T13: 0.0007 T23: -0.0861 REMARK 3 L TENSOR REMARK 3 L11: 2.2417 L22: 2.6442 REMARK 3 L33: 6.1771 L12: -1.6380 REMARK 3 L13: -2.4654 L23: 0.9315 REMARK 3 S TENSOR REMARK 3 S11: -0.2952 S12: 0.4676 S13: -0.4582 REMARK 3 S21: 0.0391 S22: -0.1739 S23: 0.3600 REMARK 3 S31: 1.0257 S32: -0.8881 S33: 0.4691 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 171 B 208 REMARK 3 ORIGIN FOR THE GROUP (A): 50.4824 -25.7915 59.2244 REMARK 3 T TENSOR REMARK 3 T11: 0.4220 T22: 0.2078 REMARK 3 T33: 0.2684 T12: 0.1887 REMARK 3 T13: -0.0349 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.6944 L22: 1.4167 REMARK 3 L33: 1.6396 L12: -0.0678 REMARK 3 L13: -0.2462 L23: -0.5518 REMARK 3 S TENSOR REMARK 3 S11: -0.1740 S12: -0.0161 S13: -0.1884 REMARK 3 S21: 0.0823 S22: 0.1427 S23: -0.1480 REMARK 3 S31: 0.3559 S32: 0.2438 S33: 0.0313 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 209 B 228 REMARK 3 ORIGIN FOR THE GROUP (A): 44.6715 -16.2031 55.9882 REMARK 3 T TENSOR REMARK 3 T11: 0.3287 T22: 0.1225 REMARK 3 T33: 0.2070 T12: 0.1091 REMARK 3 T13: -0.0123 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.0986 L22: 2.3837 REMARK 3 L33: 3.1807 L12: 0.4073 REMARK 3 L13: 0.0473 L23: 0.5778 REMARK 3 S TENSOR REMARK 3 S11: -0.0520 S12: -0.0165 S13: -0.0475 REMARK 3 S21: 0.2711 S22: 0.1086 S23: -0.1553 REMARK 3 S31: 0.2513 S32: -0.0023 S33: -0.0566 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 229 B 253 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4715 -9.2362 51.1275 REMARK 3 T TENSOR REMARK 3 T11: 0.3952 T22: 0.1859 REMARK 3 T33: 0.2126 T12: 0.1058 REMARK 3 T13: -0.0580 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.5642 L22: 2.1199 REMARK 3 L33: 3.8207 L12: 1.0575 REMARK 3 L13: 0.8099 L23: 1.7789 REMARK 3 S TENSOR REMARK 3 S11: 0.0913 S12: 0.0541 S13: -0.1068 REMARK 3 S21: 0.2635 S22: 0.1880 S23: -0.0890 REMARK 3 S31: 0.5521 S32: 0.0741 S33: -0.2793 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 254 B 272 REMARK 3 ORIGIN FOR THE GROUP (A): 41.7120 -13.4883 43.1636 REMARK 3 T TENSOR REMARK 3 T11: 0.2494 T22: 0.1078 REMARK 3 T33: 0.2115 T12: 0.0634 REMARK 3 T13: -0.0145 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 8.4457 L22: 1.0340 REMARK 3 L33: 2.9502 L12: 1.3974 REMARK 3 L13: 1.6396 L23: -0.4969 REMARK 3 S TENSOR REMARK 3 S11: -0.0600 S12: -0.4356 S13: 0.3353 REMARK 3 S21: 0.0199 S22: 0.0513 S23: 0.0989 REMARK 3 S31: 0.0239 S32: -0.0945 S33: 0.0088 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 273 B 295 REMARK 3 ORIGIN FOR THE GROUP (A): 36.9450 -6.5120 40.6484 REMARK 3 T TENSOR REMARK 3 T11: 0.2899 T22: 0.1562 REMARK 3 T33: 0.2399 T12: 0.0261 REMARK 3 T13: -0.0322 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.4744 L22: 1.3233 REMARK 3 L33: 1.7170 L12: 0.3813 REMARK 3 L13: 0.1722 L23: 0.1022 REMARK 3 S TENSOR REMARK 3 S11: -0.1965 S12: -0.0594 S13: 0.1891 REMARK 3 S21: 0.0012 S22: 0.1091 S23: 0.1069 REMARK 3 S31: -0.0840 S32: -0.0602 S33: 0.0874 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 296 B 311 REMARK 3 ORIGIN FOR THE GROUP (A): 45.0188 -2.4493 63.4839 REMARK 3 T TENSOR REMARK 3 T11: 0.3824 T22: 0.1457 REMARK 3 T33: 0.1437 T12: 0.1212 REMARK 3 T13: -0.0256 T23: -0.0630 REMARK 3 L TENSOR REMARK 3 L11: 5.7267 L22: 4.6039 REMARK 3 L33: 5.0373 L12: -2.2461 REMARK 3 L13: 1.2546 L23: -0.2096 REMARK 3 S TENSOR REMARK 3 S11: -0.2204 S12: -0.6173 S13: 0.0380 REMARK 3 S21: 0.7574 S22: 0.4219 S23: 0.0313 REMARK 3 S31: -0.3182 S32: 0.2043 S33: -0.2015 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 312 B 318 REMARK 3 ORIGIN FOR THE GROUP (A): 55.0217 1.1034 61.4117 REMARK 3 T TENSOR REMARK 3 T11: 0.3891 T22: 0.4367 REMARK 3 T33: 0.4272 T12: 0.0402 REMARK 3 T13: -0.2190 T23: -0.1847 REMARK 3 L TENSOR REMARK 3 L11: 2.6078 L22: 10.2182 REMARK 3 L33: 7.4592 L12: 5.1510 REMARK 3 L13: -4.3902 L23: -8.7024 REMARK 3 S TENSOR REMARK 3 S11: 0.0523 S12: -0.2272 S13: -0.1805 REMARK 3 S21: 0.2117 S22: -0.3627 S23: -0.4635 REMARK 3 S31: -0.1942 S32: 0.3505 S33: 0.3105 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS REMARK 4 REMARK 4 3H8V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052838. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97944 REMARK 200 MONOCHROMATOR : KOHZU HLD8-24 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45414 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.85900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZFN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M LITHIUM SULPHATE, 0.3 M AMMONIUM REMARK 280 SULPHATE, 0.1 M SODIUM CITRATE, PH 6.2 , VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 138.00333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.00167 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.00167 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 138.00333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 38 REMARK 465 GLY A 39 REMARK 465 SER A 40 REMARK 465 SER A 41 REMARK 465 HIS A 42 REMARK 465 HIS A 43 REMARK 465 HIS A 44 REMARK 465 HIS A 45 REMARK 465 HIS A 46 REMARK 465 HIS A 47 REMARK 465 SER A 48 REMARK 465 SER A 49 REMARK 465 GLY A 50 REMARK 465 LEU A 51 REMARK 465 VAL A 52 REMARK 465 PRO A 53 REMARK 465 ARG A 54 REMARK 465 GLY A 55 REMARK 465 SER A 56 REMARK 465 MET A 57 REMARK 465 ALA A 58 REMARK 465 LEU A 59 REMARK 465 LYS A 60 REMARK 465 ARG A 61 REMARK 465 MET A 62 REMARK 465 GLY A 63 REMARK 465 ILE A 64 REMARK 465 VAL A 65 REMARK 465 SER A 66 REMARK 465 ASP A 67 REMARK 465 TYR A 68 REMARK 465 GLU A 109 REMARK 465 LEU A 110 REMARK 465 ALA A 111 REMARK 465 ASN A 112 REMARK 465 MET A 113 REMARK 465 ASN A 114 REMARK 465 ARG A 115 REMARK 465 LEU A 116 REMARK 465 PHE A 117 REMARK 465 PHE A 118 REMARK 465 GLN A 119 REMARK 465 PRO A 120 REMARK 465 ILE A 239 REMARK 465 ASP A 240 REMARK 465 GLU A 241 REMARK 465 LYS A 242 REMARK 465 THR A 243 REMARK 465 LEU A 244 REMARK 465 LYS A 245 REMARK 465 VAL A 319 REMARK 465 ALA A 320 REMARK 465 ALA A 321 REMARK 465 LEU A 322 REMARK 465 PRO A 323 REMARK 465 LYS A 324 REMARK 465 GLN A 325 REMARK 465 GLU A 326 REMARK 465 VAL A 327 REMARK 465 ILE A 328 REMARK 465 GLN A 329 REMARK 465 MET B 38 REMARK 465 GLY B 39 REMARK 465 SER B 40 REMARK 465 SER B 41 REMARK 465 HIS B 42 REMARK 465 HIS B 43 REMARK 465 HIS B 44 REMARK 465 HIS B 45 REMARK 465 HIS B 46 REMARK 465 HIS B 47 REMARK 465 SER B 48 REMARK 465 SER B 49 REMARK 465 GLY B 50 REMARK 465 LEU B 51 REMARK 465 VAL B 52 REMARK 465 PRO B 53 REMARK 465 ARG B 54 REMARK 465 GLY B 55 REMARK 465 SER B 56 REMARK 465 MET B 57 REMARK 465 ALA B 58 REMARK 465 LEU B 59 REMARK 465 LYS B 60 REMARK 465 ARG B 61 REMARK 465 MET B 62 REMARK 465 GLY B 63 REMARK 465 ILE B 64 REMARK 465 VAL B 65 REMARK 465 SER B 66 REMARK 465 ASP B 67 REMARK 465 TYR B 68 REMARK 465 GLU B 69 REMARK 465 LYS B 107 REMARK 465 VAL B 108 REMARK 465 GLU B 109 REMARK 465 LEU B 110 REMARK 465 ALA B 111 REMARK 465 ASN B 112 REMARK 465 MET B 113 REMARK 465 ASN B 114 REMARK 465 ARG B 115 REMARK 465 LEU B 116 REMARK 465 PHE B 117 REMARK 465 PHE B 118 REMARK 465 GLN B 119 REMARK 465 PRO B 120 REMARK 465 HIS B 121 REMARK 465 GLN B 122 REMARK 465 ALA B 123 REMARK 465 GLY B 124 REMARK 465 ASN B 238 REMARK 465 ILE B 239 REMARK 465 ASP B 240 REMARK 465 GLU B 241 REMARK 465 LYS B 242 REMARK 465 THR B 243 REMARK 465 LEU B 244 REMARK 465 LYS B 245 REMARK 465 ARG B 246 REMARK 465 GLU B 247 REMARK 465 GLY B 248 REMARK 465 ALA B 321 REMARK 465 LEU B 322 REMARK 465 PRO B 323 REMARK 465 LYS B 324 REMARK 465 GLN B 325 REMARK 465 GLU B 326 REMARK 465 VAL B 327 REMARK 465 ILE B 328 REMARK 465 GLN B 329 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 GLN A 129 CD OE1 NE2 REMARK 470 ASN A 238 CG OD1 ND2 REMARK 470 ARG A 246 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 247 CG CD OE1 OE2 REMARK 470 ARG A 306 NE CZ NH1 NH2 REMARK 470 GLU A 314 CD OE1 OE2 REMARK 470 LYS A 318 CD CE NZ REMARK 470 ARG B 72 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 106 CG OD1 OD2 REMARK 470 LYS B 127 CD CE NZ REMARK 470 GLU B 170 CG CD OE1 OE2 REMARK 470 ASP B 183 CG OD1 OD2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 LYS B 310 CG CD CE NZ REMARK 470 GLU B 313 CG CD OE1 OE2 REMARK 470 LYS B 316 CE NZ REMARK 470 LYS B 317 CD CE NZ REMARK 470 LYS B 318 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 123 89.35 -65.02 REMARK 500 ALA A 237 -78.87 -133.71 REMARK 500 ALA B 236 -28.93 71.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 226 SG REMARK 620 2 CYS A 229 SG 111.0 REMARK 620 3 CYS A 303 SG 106.4 112.4 REMARK 620 4 CYS A 308 SG 108.5 102.7 115.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 226 SG REMARK 620 2 CYS B 229 SG 112.2 REMARK 620 3 CYS B 303 SG 106.7 112.4 REMARK 620 4 CYS B 308 SG 110.3 102.0 113.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GUC RELATED DB: PDB REMARK 900 HUMAN UBIQUITIN-ACTIVATING ENZYME 5 IN COMPLEX WITH AMPPNP DBREF 3H8V A 57 329 UNP Q9GZZ9 UBA5_HUMAN 57 329 DBREF 3H8V B 57 329 UNP Q9GZZ9 UBA5_HUMAN 57 329 SEQADV 3H8V MET A 38 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V GLY A 39 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER A 40 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER A 41 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS A 42 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS A 43 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS A 44 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS A 45 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS A 46 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS A 47 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER A 48 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER A 49 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V GLY A 50 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V LEU A 51 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V VAL A 52 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V PRO A 53 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V ARG A 54 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V GLY A 55 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER A 56 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V MET B 38 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V GLY B 39 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER B 40 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER B 41 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS B 42 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS B 43 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS B 44 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS B 45 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS B 46 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V HIS B 47 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER B 48 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER B 49 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V GLY B 50 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V LEU B 51 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V VAL B 52 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V PRO B 53 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V ARG B 54 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V GLY B 55 UNP Q9GZZ9 EXPRESSION TAG SEQADV 3H8V SER B 56 UNP Q9GZZ9 EXPRESSION TAG SEQRES 1 A 292 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 292 LEU VAL PRO ARG GLY SER MET ALA LEU LYS ARG MET GLY SEQRES 3 A 292 ILE VAL SER ASP TYR GLU LYS ILE ARG THR PHE ALA VAL SEQRES 4 A 292 ALA ILE VAL GLY VAL GLY GLY VAL GLY SER VAL THR ALA SEQRES 5 A 292 GLU MET LEU THR ARG CYS GLY ILE GLY LYS LEU LEU LEU SEQRES 6 A 292 PHE ASP TYR ASP LYS VAL GLU LEU ALA ASN MET ASN ARG SEQRES 7 A 292 LEU PHE PHE GLN PRO HIS GLN ALA GLY LEU SER LYS VAL SEQRES 8 A 292 GLN ALA ALA GLU HIS THR LEU ARG ASN ILE ASN PRO ASP SEQRES 9 A 292 VAL LEU PHE GLU VAL HIS ASN TYR ASN ILE THR THR VAL SEQRES 10 A 292 GLU ASN PHE GLN HIS PHE MET ASP ARG ILE SER ASN GLY SEQRES 11 A 292 GLY LEU GLU GLU GLY LYS PRO VAL ASP LEU VAL LEU SER SEQRES 12 A 292 CYS VAL ASP ASN PHE GLU ALA ARG MET THR ILE ASN THR SEQRES 13 A 292 ALA CYS ASN GLU LEU GLY GLN THR TRP MET GLU SER GLY SEQRES 14 A 292 VAL SER GLU ASN ALA VAL SER GLY HIS ILE GLN LEU ILE SEQRES 15 A 292 ILE PRO GLY GLU SER ALA CYS PHE ALA CYS ALA PRO PRO SEQRES 16 A 292 LEU VAL VAL ALA ALA ASN ILE ASP GLU LYS THR LEU LYS SEQRES 17 A 292 ARG GLU GLY VAL CYS ALA ALA SER LEU PRO THR THR MET SEQRES 18 A 292 GLY VAL VAL ALA GLY ILE LEU VAL GLN ASN VAL LEU LYS SEQRES 19 A 292 PHE LEU LEU ASN PHE GLY THR VAL SER PHE TYR LEU GLY SEQRES 20 A 292 TYR ASN ALA MET GLN ASP PHE PHE PRO THR MET SER MET SEQRES 21 A 292 LYS PRO ASN PRO GLN CYS ASP ASP ARG ASN CYS ARG LYS SEQRES 22 A 292 GLN GLN GLU GLU TYR LYS LYS LYS VAL ALA ALA LEU PRO SEQRES 23 A 292 LYS GLN GLU VAL ILE GLN SEQRES 1 B 292 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 292 LEU VAL PRO ARG GLY SER MET ALA LEU LYS ARG MET GLY SEQRES 3 B 292 ILE VAL SER ASP TYR GLU LYS ILE ARG THR PHE ALA VAL SEQRES 4 B 292 ALA ILE VAL GLY VAL GLY GLY VAL GLY SER VAL THR ALA SEQRES 5 B 292 GLU MET LEU THR ARG CYS GLY ILE GLY LYS LEU LEU LEU SEQRES 6 B 292 PHE ASP TYR ASP LYS VAL GLU LEU ALA ASN MET ASN ARG SEQRES 7 B 292 LEU PHE PHE GLN PRO HIS GLN ALA GLY LEU SER LYS VAL SEQRES 8 B 292 GLN ALA ALA GLU HIS THR LEU ARG ASN ILE ASN PRO ASP SEQRES 9 B 292 VAL LEU PHE GLU VAL HIS ASN TYR ASN ILE THR THR VAL SEQRES 10 B 292 GLU ASN PHE GLN HIS PHE MET ASP ARG ILE SER ASN GLY SEQRES 11 B 292 GLY LEU GLU GLU GLY LYS PRO VAL ASP LEU VAL LEU SER SEQRES 12 B 292 CYS VAL ASP ASN PHE GLU ALA ARG MET THR ILE ASN THR SEQRES 13 B 292 ALA CYS ASN GLU LEU GLY GLN THR TRP MET GLU SER GLY SEQRES 14 B 292 VAL SER GLU ASN ALA VAL SER GLY HIS ILE GLN LEU ILE SEQRES 15 B 292 ILE PRO GLY GLU SER ALA CYS PHE ALA CYS ALA PRO PRO SEQRES 16 B 292 LEU VAL VAL ALA ALA ASN ILE ASP GLU LYS THR LEU LYS SEQRES 17 B 292 ARG GLU GLY VAL CYS ALA ALA SER LEU PRO THR THR MET SEQRES 18 B 292 GLY VAL VAL ALA GLY ILE LEU VAL GLN ASN VAL LEU LYS SEQRES 19 B 292 PHE LEU LEU ASN PHE GLY THR VAL SER PHE TYR LEU GLY SEQRES 20 B 292 TYR ASN ALA MET GLN ASP PHE PHE PRO THR MET SER MET SEQRES 21 B 292 LYS PRO ASN PRO GLN CYS ASP ASP ARG ASN CYS ARG LYS SEQRES 22 B 292 GLN GLN GLU GLU TYR LYS LYS LYS VAL ALA ALA LEU PRO SEQRES 23 B 292 LYS GLN GLU VAL ILE GLN HET ZN A 401 1 HET ATP A 402 31 HET ZN B 401 1 HETNAM ZN ZINC ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 6 HOH *157(H2 O) HELIX 1 1 GLU A 69 THR A 73 5 5 HELIX 2 2 GLY A 82 GLY A 96 1 15 HELIX 3 3 SER A 126 ASN A 139 1 14 HELIX 4 4 THR A 153 GLY A 167 1 15 HELIX 5 5 ASN A 184 GLY A 199 1 16 HELIX 6 6 ARG A 246 ASN A 275 1 30 HELIX 7 7 ASP A 305 LYS A 318 1 14 HELIX 8 8 LYS B 70 THR B 73 5 4 HELIX 9 9 GLY B 83 GLY B 96 1 14 HELIX 10 10 SER B 126 ASN B 139 1 14 HELIX 11 11 THR B 153 GLY B 167 1 15 HELIX 12 12 ASN B 184 GLY B 199 1 16 HELIX 13 13 VAL B 249 ASN B 275 1 27 HELIX 14 14 ASP B 305 ALA B 320 1 16 SHEET 1 A 8 LEU A 143 HIS A 147 0 SHEET 2 A 8 LYS A 99 PHE A 103 1 N LEU A 102 O GLU A 145 SHEET 3 A 8 ALA A 75 VAL A 79 1 N ILE A 78 O LEU A 101 SHEET 4 A 8 LEU A 177 SER A 180 1 O LEU A 179 N ALA A 77 SHEET 5 A 8 TRP A 202 VAL A 207 1 O MET A 203 N SER A 180 SHEET 6 A 8 SER A 213 ILE A 219 -1 O ILE A 219 N TRP A 202 SHEET 7 A 8 TYR A 282 ASN A 286 -1 O LEU A 283 N ILE A 216 SHEET 8 A 8 THR A 294 MET A 295 -1 O MET A 295 N TYR A 282 SHEET 1 B 8 LEU B 143 HIS B 147 0 SHEET 2 B 8 LYS B 99 PHE B 103 1 N LEU B 100 O LEU B 143 SHEET 3 B 8 ALA B 75 VAL B 79 1 N ILE B 78 O LEU B 101 SHEET 4 B 8 LEU B 177 SER B 180 1 O LEU B 179 N ALA B 77 SHEET 5 B 8 TRP B 202 VAL B 207 1 O MET B 203 N SER B 180 SHEET 6 B 8 SER B 213 ILE B 219 -1 O ILE B 219 N TRP B 202 SHEET 7 B 8 TYR B 282 ASN B 286 -1 O TYR B 285 N GLY B 214 SHEET 8 B 8 THR B 294 MET B 295 -1 O MET B 295 N TYR B 282 LINK SG CYS A 226 ZN ZN A 401 1555 1555 2.41 LINK SG CYS A 229 ZN ZN A 401 1555 1555 2.42 LINK SG CYS A 303 ZN ZN A 401 1555 1555 2.39 LINK SG CYS A 308 ZN ZN A 401 1555 1555 2.34 LINK SG CYS B 226 ZN ZN B 401 1555 1555 2.41 LINK SG CYS B 229 ZN ZN B 401 1555 1555 2.41 LINK SG CYS B 303 ZN ZN B 401 1555 1555 2.38 LINK SG CYS B 308 ZN ZN B 401 1555 1555 2.30 SITE 1 AC1 4 CYS A 226 CYS A 229 CYS A 303 CYS A 308 SITE 1 AC2 16 GLY A 80 GLY A 82 GLY A 83 ASP A 104 SITE 2 AC2 16 TYR A 105 ASP A 106 LYS A 127 ASN A 150 SITE 3 AC2 16 THR A 152 CYS A 181 VAL A 182 ASP A 183 SITE 4 AC2 16 ASN A 184 ALA A 187 HOH A 442 HOH A 463 SITE 1 AC3 4 CYS B 226 CYS B 229 CYS B 303 CYS B 308 CRYST1 77.999 77.999 207.005 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012821 0.007402 0.000000 0.00000 SCALE2 0.000000 0.014804 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004831 0.00000