HEADER TRANSFERASE 30-APR-09 3H9F TITLE CRYSTAL STRUCTURE OF HUMAN DUAL SPECIFICITY PROTEIN KINASE (TTK) IN TITLE 2 COMPLEX WITH A PYRIMIDO-DIAZEPIN LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PROTEIN KINASE TTK; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE, PYT; COMPND 5 EC: 2.7.12.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MPS1L1, TTK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS TTK, HMPS1, PYT, ESK, KINASE, DUAL SPECIFICITY, PHOSPHOTYROSINE KEYWDS 2 PICKED THREONINE KINASE, SGC, STRUCTURAL GENOMICS CONSORTIUM, ATP- KEYWDS 3 BINDING, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, SERINE/THREONINE- KEYWDS 4 PROTEIN KINASE, TRANSFERASE, TYROSINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,M.SOUNDARARAJAN,T.KEATES,J.M.ELKINS,O.KING, AUTHOR 2 O.FEDOROV,S.S.PICAUD,A.C.W.PIKE,W.YUE,A.CHAIKUAD,F.VON DELFT, AUTHOR 3 C.H.ARROWSMITH,A.EDWARDS,J.WEIGELT,C.BOUNTRA,N.KWIATKOWSKI,N.S.GRAY, AUTHOR 4 S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 06-SEP-23 3H9F 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 HETSYN LINK REVDAT 3 13-JUL-11 3H9F 1 VERSN REVDAT 2 01-SEP-10 3H9F 1 JRNL REVDAT 1 19-MAY-09 3H9F 0 JRNL AUTH N.KWIATKOWSKI,N.JELLUMA,P.FILIPPAKOPOULOS,M.SOUNDARARAJAN, JRNL AUTH 2 M.S.MANAK,M.KWON,H.G.CHOI,T.SIM,Q.L.DEVERAUX,S.ROTTMANN, JRNL AUTH 3 D.PELLMAN,J.V.SHAH,G.J.KOPS,S.KNAPP,N.S.GRAY JRNL TITL SMALL-MOLECULE KINASE INHIBITORS PROVIDE INSIGHT INTO MPS1 JRNL TITL 2 CELL CYCLE FUNCTION. JRNL REF NAT.CHEM.BIOL. V. 6 359 2010 JRNL REFN ISSN 1552-4450 JRNL PMID 20383151 JRNL DOI 10.1038/NCHEMBIO.345 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 14199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 709 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 964 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.4560 REMARK 3 BIN FREE R VALUE SET COUNT : 49 REMARK 3 BIN FREE R VALUE : 0.4680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2084 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 11 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 80.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.51000 REMARK 3 B22 (A**2) : 2.32000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.360 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.596 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2171 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1438 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2950 ; 1.471 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3505 ; 1.359 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 260 ; 5.681 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;40.310 ;25.435 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 373 ;16.589 ;15.040 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;25.664 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 323 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2352 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 389 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1314 ; 3.752 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 523 ; 0.919 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2125 ; 6.104 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 857 ;10.141 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 825 ;12.840 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 515 A 569 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6307 24.4950 46.7227 REMARK 3 T TENSOR REMARK 3 T11: 0.1908 T22: 0.3456 REMARK 3 T33: 0.3120 T12: -0.0469 REMARK 3 T13: -0.0837 T23: -0.0931 REMARK 3 L TENSOR REMARK 3 L11: 8.6782 L22: 3.7446 REMARK 3 L33: 7.6079 L12: -1.4429 REMARK 3 L13: -2.0670 L23: -3.0503 REMARK 3 S TENSOR REMARK 3 S11: -0.1436 S12: -0.7418 S13: 0.2427 REMARK 3 S21: 0.2693 S22: 0.2649 S23: -0.6707 REMARK 3 S31: -0.1154 S32: 0.8005 S33: -0.1213 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 570 A 663 REMARK 3 ORIGIN FOR THE GROUP (A): -3.7574 23.1638 38.8088 REMARK 3 T TENSOR REMARK 3 T11: 0.1556 T22: 0.0618 REMARK 3 T33: 0.0762 T12: 0.0502 REMARK 3 T13: 0.0318 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 6.8394 L22: 1.4697 REMARK 3 L33: 4.4524 L12: 0.3811 REMARK 3 L13: 3.1567 L23: 0.0449 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: -0.2991 S13: 0.2162 REMARK 3 S21: -0.0288 S22: -0.0224 S23: 0.1825 REMARK 3 S31: -0.1668 S32: -0.2150 S33: -0.0131 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 664 A 794 REMARK 3 ORIGIN FOR THE GROUP (A): -12.1441 9.2431 30.2134 REMARK 3 T TENSOR REMARK 3 T11: 0.2093 T22: 0.1626 REMARK 3 T33: 0.2864 T12: -0.0428 REMARK 3 T13: -0.0159 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 4.7058 L22: 4.0866 REMARK 3 L33: 4.7579 L12: -1.4686 REMARK 3 L13: 1.3859 L23: -0.6252 REMARK 3 S TENSOR REMARK 3 S11: 0.1899 S12: 0.2403 S13: -0.8595 REMARK 3 S21: -0.0747 S22: -0.0181 S23: 0.1092 REMARK 3 S31: 0.6569 S32: 0.0573 S33: -0.1718 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3H9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052858. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9782 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14201 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 41.414 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.73300 REMARK 200 R SYM FOR SHELL (I) : 0.41700 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: 3CEK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350, 0.2M MGCL2, 0.1M BT PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.34500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.37500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.60000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.34500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.37500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.60000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.34500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.37500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.60000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.34500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.37500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.60000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 115.20000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 115.20000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 1 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 VAL A 506 REMARK 465 ASP A 507 REMARK 465 LEU A 508 REMARK 465 GLY A 509 REMARK 465 THR A 510 REMARK 465 GLU A 511 REMARK 465 ASN A 512 REMARK 465 LEU A 513 REMARK 465 TYR A 514 REMARK 465 VAL A 678 REMARK 465 VAL A 679 REMARK 465 LYS A 680 REMARK 465 ASP A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 VAL A 684 REMARK 465 SER A 699 REMARK 465 SER A 700 REMARK 465 SER A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 ASN A 704 REMARK 465 GLY A 705 REMARK 465 LYS A 706 REMARK 465 SER A 707 REMARK 465 LYS A 708 REMARK 465 THR A 795 REMARK 465 HIS A 796 REMARK 465 PRO A 797 REMARK 465 VAL A 798 REMARK 465 ASN A 799 REMARK 465 GLN A 800 REMARK 465 MET A 801 REMARK 465 ALA A 802 REMARK 465 LYS A 803 REMARK 465 GLY A 804 REMARK 465 THR A 805 REMARK 465 THR A 806 REMARK 465 GLU A 807 REMARK 465 GLU A 808 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 515 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 516 CD OE1 NE2 REMARK 470 ARG A 523 CZ NH1 NH2 REMARK 470 SER A 536 OG REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 LYS A 547 CD CE NZ REMARK 470 GLN A 563 CG CD OE1 NE2 REMARK 470 GLU A 571 CG CD OE1 OE2 REMARK 470 LYS A 577 CD CE NZ REMARK 470 GLN A 580 CD OE1 NE2 REMARK 470 LYS A 614 CE NZ REMARK 470 LYS A 615 CE NZ REMARK 470 LYS A 617 CG CD CE NZ REMARK 470 ASP A 657 CG OD1 OD2 REMARK 470 ILE A 667 CG1 CG2 CD1 REMARK 470 GLN A 670 CG CD OE1 NE2 REMARK 470 THR A 686 OG1 CG2 REMARK 470 SER A 709 OG REMARK 470 LYS A 710 CG CD CE NZ REMARK 470 ILE A 711 CD1 REMARK 470 ILE A 741 CG1 CG2 CD1 REMARK 470 GLU A 753 CD OE1 OE2 REMARK 470 ASP A 758 CG OD1 OD2 REMARK 470 LYS A 773 NZ REMARK 470 GLN A 794 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 536 52.29 -103.04 REMARK 500 LYS A 617 -71.16 -56.71 REMARK 500 SER A 646 -10.85 80.34 REMARK 500 ILE A 667 -72.46 -58.58 REMARK 500 ASP A 697 49.06 -71.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TPO A 675 O3P REMARK 620 2 SEP A 677 O1P 91.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 92M A 809 DBREF 3H9F A 519 808 UNP P33981 TTK_HUMAN 519 808 SEQADV 3H9F MET A 496 UNP P33981 EXPRESSION TAG SEQADV 3H9F HIS A 497 UNP P33981 EXPRESSION TAG SEQADV 3H9F HIS A 498 UNP P33981 EXPRESSION TAG SEQADV 3H9F HIS A 499 UNP P33981 EXPRESSION TAG SEQADV 3H9F HIS A 500 UNP P33981 EXPRESSION TAG SEQADV 3H9F HIS A 501 UNP P33981 EXPRESSION TAG SEQADV 3H9F HIS A 502 UNP P33981 EXPRESSION TAG SEQADV 3H9F SER A 503 UNP P33981 EXPRESSION TAG SEQADV 3H9F SER A 504 UNP P33981 EXPRESSION TAG SEQADV 3H9F GLY A 505 UNP P33981 EXPRESSION TAG SEQADV 3H9F VAL A 506 UNP P33981 EXPRESSION TAG SEQADV 3H9F ASP A 507 UNP P33981 EXPRESSION TAG SEQADV 3H9F LEU A 508 UNP P33981 EXPRESSION TAG SEQADV 3H9F GLY A 509 UNP P33981 EXPRESSION TAG SEQADV 3H9F THR A 510 UNP P33981 EXPRESSION TAG SEQADV 3H9F GLU A 511 UNP P33981 EXPRESSION TAG SEQADV 3H9F ASN A 512 UNP P33981 EXPRESSION TAG SEQADV 3H9F LEU A 513 UNP P33981 EXPRESSION TAG SEQADV 3H9F TYR A 514 UNP P33981 EXPRESSION TAG SEQADV 3H9F PHE A 515 UNP P33981 EXPRESSION TAG SEQADV 3H9F GLN A 516 UNP P33981 EXPRESSION TAG SEQADV 3H9F SER A 517 UNP P33981 EXPRESSION TAG SEQADV 3H9F MET A 518 UNP P33981 EXPRESSION TAG SEQRES 1 A 313 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 313 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS SEQRES 3 A 313 GLY ARG ILE TYR SER ILE LEU LYS GLN ILE GLY SER GLY SEQRES 4 A 313 GLY SER SER LYS VAL PHE GLN VAL LEU ASN GLU LYS LYS SEQRES 5 A 313 GLN ILE TYR ALA ILE LYS TYR VAL ASN LEU GLU GLU ALA SEQRES 6 A 313 ASP ASN GLN THR LEU ASP SER TYR ARG ASN GLU ILE ALA SEQRES 7 A 313 TYR LEU ASN LYS LEU GLN GLN HIS SER ASP LYS ILE ILE SEQRES 8 A 313 ARG LEU TYR ASP TYR GLU ILE THR ASP GLN TYR ILE TYR SEQRES 9 A 313 MET VAL MET GLU CYS GLY ASN ILE ASP LEU ASN SER TRP SEQRES 10 A 313 LEU LYS LYS LYS LYS SER ILE ASP PRO TRP GLU ARG LYS SEQRES 11 A 313 SER TYR TRP LYS ASN MET LEU GLU ALA VAL HIS THR ILE SEQRES 12 A 313 HIS GLN HIS GLY ILE VAL HIS SER ASP LEU LYS PRO ALA SEQRES 13 A 313 ASN PHE LEU ILE VAL ASP GLY MET LEU LYS LEU ILE ASP SEQRES 14 A 313 PHE GLY ILE ALA ASN GLN MET GLN PRO ASP TPO TPO SEP SEQRES 15 A 313 VAL VAL LYS ASP SER GLN VAL GLY THR VAL ASN TYR MET SEQRES 16 A 313 PRO PRO GLU ALA ILE LYS ASP MET SER SER SER ARG GLU SEQRES 17 A 313 ASN GLY LYS SER LYS SER LYS ILE SER PRO LYS SER ASP SEQRES 18 A 313 VAL TRP SER LEU GLY CYS ILE LEU TYR TYR MET THR TYR SEQRES 19 A 313 GLY LYS THR PRO PHE GLN GLN ILE ILE ASN GLN ILE SER SEQRES 20 A 313 LYS LEU HIS ALA ILE ILE ASP PRO ASN HIS GLU ILE GLU SEQRES 21 A 313 PHE PRO ASP ILE PRO GLU LYS ASP LEU GLN ASP VAL LEU SEQRES 22 A 313 LYS CYS CYS LEU LYS ARG ASP PRO LYS GLN ARG ILE SER SEQRES 23 A 313 ILE PRO GLU LEU LEU ALA HIS PRO TYR VAL GLN ILE GLN SEQRES 24 A 313 THR HIS PRO VAL ASN GLN MET ALA LYS GLY THR THR GLU SEQRES 25 A 313 GLU MODRES 3H9F TPO A 675 THR PHOSPHOTHREONINE MODRES 3H9F TPO A 676 THR PHOSPHOTHREONINE MODRES 3H9F SEP A 677 SER PHOSPHOSERINE HET TPO A 675 11 HET TPO A 676 11 HET SEP A 677 10 HET MG A 1 1 HET MG A 2 1 HET 92M A 809 34 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM MG MAGNESIUM ION HETNAM 92M 9-CYCLOPENTYL-2-(4-(4-HYDROXYPIPERIDIN-1-YL)-2- HETNAM 2 92M METHOXYPHENYLAMINO)-5-METHYL-8,9-DIHYDRO-5H- HETNAM 3 92M PYRIMIDO[4,5-B][1,4]DIAZEPIN -6(7H)-ONE HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE HETSYN 92M 9-CYCLOPENTYL-2-{[4-(4-HYDROXYPIPERIDIN-1-YL)-2- HETSYN 2 92M METHOXYPHENYL]AMINO}-5-METHYL-5,7,8,9-TETRAHYDRO-6H- HETSYN 3 92M PYRIMIDO[4,5-B][1,4 ]DIAZEPIN-6-ONE FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 1 SEP C3 H8 N O6 P FORMUL 2 MG 2(MG 2+) FORMUL 4 92M C25 H34 N6 O3 FORMUL 5 HOH *11(H2 O) HELIX 1 1 ASP A 561 GLN A 580 1 20 HELIX 2 2 LEU A 609 LYS A 616 1 8 HELIX 3 3 ASP A 620 HIS A 641 1 22 HELIX 4 4 LYS A 649 ALA A 651 5 3 HELIX 5 5 PRO A 691 ASP A 697 1 7 HELIX 6 6 PRO A 713 GLY A 730 1 18 HELIX 7 7 ASN A 739 ASP A 749 1 11 HELIX 8 8 GLU A 761 LEU A 772 1 12 HELIX 9 9 ASP A 775 ARG A 779 5 5 HELIX 10 10 SER A 781 LEU A 786 1 6 HELIX 11 11 HIS A 788 ILE A 793 1 6 SHEET 1 A 6 SER A 517 VAL A 520 0 SHEET 2 A 6 ARG A 523 SER A 533 -1 O TYR A 525 N MET A 518 SHEET 3 A 6 SER A 537 LEU A 543 -1 O VAL A 539 N GLY A 532 SHEET 4 A 6 ILE A 549 ASN A 556 -1 O TYR A 554 N LYS A 538 SHEET 5 A 6 TYR A 597 MET A 602 -1 O MET A 602 N ALA A 551 SHEET 6 A 6 LEU A 588 ILE A 593 -1 N TYR A 589 O VAL A 601 SHEET 1 B 3 SER A 517 VAL A 520 0 SHEET 2 B 3 ARG A 523 SER A 533 -1 O TYR A 525 N MET A 518 SHEET 3 B 3 GLN A 672 PRO A 673 -1 O GLN A 672 N SER A 533 SHEET 1 C 3 ILE A 607 ASP A 608 0 SHEET 2 C 3 PHE A 653 VAL A 656 -1 O ILE A 655 N ILE A 607 SHEET 3 C 3 MET A 659 LEU A 662 -1 O MET A 659 N VAL A 656 LINK C ASP A 674 N TPO A 675 1555 1555 1.32 LINK C TPO A 675 N TPO A 676 1555 1555 1.33 LINK C TPO A 676 N SEP A 677 1555 1555 1.34 LINK MG MG A 1 O3P TPO A 675 1555 1555 2.28 LINK MG MG A 1 O1P SEP A 677 1555 1555 2.23 LINK MG MG A 2 O2P TPO A 675 1555 1555 1.84 CISPEP 1 GLY A 535 SER A 536 0 -0.39 SITE 1 AC1 2 TPO A 675 SEP A 677 SITE 1 AC2 3 TPO A 675 TPO A 676 92M A 809 SITE 1 AC3 15 MG A 2 ILE A 531 GLN A 541 ALA A 551 SITE 2 AC3 15 ILE A 586 MET A 602 GLU A 603 CYS A 604 SITE 3 AC3 15 GLY A 605 ASN A 606 ILE A 607 SER A 611 SITE 4 AC3 15 LEU A 654 ASP A 664 TPO A 676 CRYST1 70.690 110.750 115.200 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014146 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008681 0.00000