HEADER LYASE 30-APR-09 3H9M TITLE CRYSTAL STRUCTURE OF PARA-AMINOBENZOATE SYNTHETASE, COMPONENT I FROM TITLE 2 CYTOPHAGA HUTCHINSONII COMPND MOL_ID: 1; COMPND 2 MOLECULE: P-AMINOBENZOATE SYNTHETASE, COMPONENT I; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2 TO 426; COMPND 5 EC: 4.1.3.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYTOPHAGA HUTCHINSONII ATCC 33406; SOURCE 3 ORGANISM_TAXID: 269798; SOURCE 4 GENE: CHU_1808, PABB, YP_678417.1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-CODON+RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC); MODIFIED PET26B KEYWDS PARA-AMINOBENZOATE SYNTHETASE, COMPONENT I, CYTOPHAGA HUTCHINSONII, KEYWDS 2 YP_678417.1, CHU_1808, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, NEW YORK STRUCTURAL GENOMIX RESEARCH CONSORTIUM, KEYWDS 4 NYSGXRC, LYASE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR P.SAMPATHKUMAR,S.ATWELL,S.WASSERMAN,J.DO,K.BAIN,M.RUTTER,T.GHEYI, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS (NYSGXRC) REVDAT 6 03-APR-24 3H9M 1 REMARK REVDAT 5 10-FEB-21 3H9M 1 AUTHOR JRNL REMARK LINK REVDAT 4 21-NOV-18 3H9M 1 AUTHOR REVDAT 3 01-NOV-17 3H9M 1 REMARK REVDAT 2 21-JUL-09 3H9M 1 AUTHOR REVDAT 1 30-JUN-09 3H9M 0 JRNL AUTH P.SAMPATHKUMAR,S.ATWELL,S.WASSERMAN,J.DO,K.BAIN,M.RUTTER, JRNL AUTH 2 T.GHEYI,J.M.SAUDER,S.K.BURLEY JRNL TITL CRYSTAL STRUCTURE OF PARA-AMINOBENZOATE SYNTHETASE, JRNL TITL 2 COMPONENT I FROM CYTOPHAGA HUTCHINSONII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 75965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3818 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4575 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 223 REMARK 3 BIN FREE R VALUE : 0.2130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3099 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 399 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.090 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3242 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2135 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4419 ; 1.279 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5234 ; 0.832 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 414 ; 6.096 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;36.320 ;24.468 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 510 ;12.372 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.839 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 498 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3624 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 666 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 625 ; 0.195 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2101 ; 0.186 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1605 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1623 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 300 ; 0.109 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.134 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 44 ; 0.211 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2148 ; 0.983 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 807 ; 0.189 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3274 ; 1.301 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1355 ; 2.086 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1136 ; 2.968 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H9M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052865. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97929 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76012 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 21.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.1 REMARK 200 DATA REDUNDANCY IN SHELL : 12.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43000 REMARK 200 FOR SHELL : 6.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL2MAP REMARK 200 STARTING MODEL: BUILT USING ARP/WARP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES PH 6.5 + 25% PEG 3000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.77100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.77100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.00300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.74850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.00300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.74850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.77100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.00300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.74850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.77100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.00300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 79.74850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLU A 144 REMARK 465 PRO A 145 REMARK 465 SER A 146 REMARK 465 THR A 147 REMARK 465 PRO A 148 REMARK 465 VAL A 149 REMARK 465 GLN A 150 REMARK 465 GLY A 247 REMARK 465 THR A 248 REMARK 465 SER A 249 REMARK 465 LYS A 250 REMARK 465 ARG A 251 REMARK 465 GLY A 252 REMARK 465 LYS A 253 REMARK 465 SER A 254 REMARK 465 LYS A 255 REMARK 465 ALA A 256 REMARK 465 GLU A 257 REMARK 465 ASP A 258 REMARK 465 GLU A 259 REMARK 465 MSE A 260 REMARK 465 LEU A 261 REMARK 465 LYS A 262 REMARK 465 GLN A 263 REMARK 465 GLN A 264 REMARK 465 LEU A 265 REMARK 465 ASN A 427 REMARK 465 GLN A 428 REMARK 465 GLU A 429 REMARK 465 GLY A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 28 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 GLN A 96 CG CD OE1 NE2 REMARK 470 GLN A 151 CG CD OE1 NE2 REMARK 470 GLU A 163 CG CD OE1 OE2 REMARK 470 GLN A 174 CG CD OE1 NE2 REMARK 470 LYS A 193 CG CD CE NZ REMARK 470 LYS A 246 CG CD CE NZ REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 GLN A 272 CG CD OE1 NE2 REMARK 470 ASN A 308 CG OD1 ND2 REMARK 470 HIS A 310 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 408 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 132 57.12 -111.28 REMARK 500 ASN A 220 -112.48 67.07 REMARK 500 ALA A 227 41.72 -107.35 REMARK 500 THR A 340 -91.10 -126.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTU A 437 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 438 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11307K RELATED DB: TARGETDB DBREF 3H9M A 4 428 UNP Q11U39 Q11U39_CYTH3 2 426 SEQADV 3H9M MSE A 1 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M SER A 2 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M LEU A 3 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M GLU A 429 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M GLY A 430 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M HIS A 431 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M HIS A 432 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M HIS A 433 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M HIS A 434 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M HIS A 435 UNP Q11U39 EXPRESSION TAG SEQADV 3H9M HIS A 436 UNP Q11U39 EXPRESSION TAG SEQRES 1 A 436 MSE SER LEU SER PHE THR PRO LEU HIS THR THR SER GLU SEQRES 2 A 436 ALA PHE ILE GLU LYS ALA LEU PRO TRP LEU GLU ASP ARG SEQRES 3 A 436 TYR PHE HIS ILE ALA TYR LEU ASN PRO ASN GLY TYR THR SEQRES 4 A 436 ALA TYR PRO GLN GLY ALA PHE ARG HIS TYR LEU ALA PHE SEQRES 5 A 436 GLY SER GLU ALA ALA ILE HIS VAL SER ASP ALA THR ARG SEQRES 6 A 436 VAL PHE GLU THR TRP ASN GLU ILE LYS LYS GLY TYR THR SEQRES 7 A 436 ASN GLU TRP ILE PHE VAL PHE ALA SER TYR ASP GLY LYS SEQRES 8 A 436 ASN SER VAL GLU GLN LEU HIS THR SER LYS GLU ALA GLY SEQRES 9 A 436 ILE ALA PHE ALA ALA ALA THR PHE PHE ILE PRO GLU HIS SEQRES 10 A 436 VAL TRP GLU ILE GLN PRO ASP GLY ILE LEU ILE HIS LYS SEQRES 11 A 436 GLY SER GLY SER SER LEU VAL THR GLU ILE GLN HIS ALA SEQRES 12 A 436 GLU PRO SER THR PRO VAL GLN GLN SER ASP ILE PHE VAL SEQRES 13 A 436 LYS GLN VAL VAL SER LYS GLU SER TYR PHE ASN ALA PHE SEQRES 14 A 436 ASP GLU LEU GLN GLN ILE ILE ALA GLN GLY ASP ALA TYR SEQRES 15 A 436 GLU ILE ASN TYR CYS ILE PRO PHE THR ALA LYS GLY ASN SEQRES 16 A 436 ILE SER PRO ALA ALA THR TYR GLN ARG LEU ASN LYS LYS SEQRES 17 A 436 THR PRO MSE PRO PHE SER VAL TYR TYR LYS PHE ASN THR SEQRES 18 A 436 GLU TYR ILE LEU SER ALA SER PRO GLU ARG PHE ILE LYS SEQRES 19 A 436 LYS THR GLY ASP THR ILE ILE SER GLN PRO ILE LYS GLY SEQRES 20 A 436 THR SER LYS ARG GLY LYS SER LYS ALA GLU ASP GLU MSE SEQRES 21 A 436 LEU LYS GLN GLN LEU GLY THR SER GLU LYS GLU GLN SER SEQRES 22 A 436 GLU ASN THR MSE ILE VAL ASP LEU VAL ARG ASN ASP LEU SEQRES 23 A 436 SER ARG THR ALA VAL ALA GLY SER VAL CYS VAL PRO GLU SEQRES 24 A 436 LEU SER GLY LEU TYR THR PHE PRO ASN VAL HIS GLN LEU SEQRES 25 A 436 ILE SER THR VAL GLN SER THR ILE ASP PRO ALA CYS SER SEQRES 26 A 436 SER ILE ASP VAL ILE GLN GLN ALA PHE PRO MSE GLY SER SEQRES 27 A 436 MSE THR GLY ALA PRO LYS VAL ASN VAL MSE LYS PHE ILE SEQRES 28 A 436 ASP ARG ILE GLU SER MSE ALA ARG GLY PRO PHE SER GLY SEQRES 29 A 436 THR VAL GLY TYR MSE ASP PRO HIS ASP ASN PHE ASP PHE SEQRES 30 A 436 ASN VAL LEU ILE ARG SER ILE PHE TYR ASN SER ALA THR SEQRES 31 A 436 GLN GLU LEU PHE MSE GLU ALA GLY SER ALA ILE THR SER SEQRES 32 A 436 TYR ALA LYS ALA GLU THR GLU TYR GLU GLU CYS LEU LEU SEQRES 33 A 436 LYS ILE THR PRO MSE ILE HIS ILE LEU ASN ASN GLN GLU SEQRES 34 A 436 GLY HIS HIS HIS HIS HIS HIS MODRES 3H9M MSE A 211 MET SELENOMETHIONINE MODRES 3H9M MSE A 277 MET SELENOMETHIONINE MODRES 3H9M MSE A 336 MET SELENOMETHIONINE MODRES 3H9M MSE A 339 MET SELENOMETHIONINE MODRES 3H9M MSE A 348 MET SELENOMETHIONINE MODRES 3H9M MSE A 357 MET SELENOMETHIONINE MODRES 3H9M MSE A 369 MET SELENOMETHIONINE MODRES 3H9M MSE A 395 MET SELENOMETHIONINE MODRES 3H9M MSE A 421 MET SELENOMETHIONINE HET MSE A 211 8 HET MSE A 277 8 HET MSE A 336 8 HET MSE A 339 8 HET MSE A 348 8 HET MSE A 357 8 HET MSE A 369 8 HET MSE A 395 8 HET MSE A 421 8 HET DTU A 437 8 HET PGE A 438 10 HETNAM MSE SELENOMETHIONINE HETNAM DTU (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL HETNAM PGE TRIETHYLENE GLYCOL FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 DTU C4 H10 O2 S2 FORMUL 3 PGE C6 H14 O4 FORMUL 4 HOH *399(H2 O) HELIX 1 1 THR A 11 ASP A 25 1 15 HELIX 2 2 ARG A 65 TYR A 77 1 13 HELIX 3 3 TYR A 88 VAL A 94 5 7 HELIX 4 4 GLY A 133 ALA A 143 1 11 HELIX 5 5 SER A 161 GLN A 178 1 18 HELIX 6 6 SER A 197 THR A 209 1 13 HELIX 7 7 SER A 268 ARG A 288 1 21 HELIX 8 8 SER A 325 ALA A 333 1 9 HELIX 9 9 MSE A 336 MSE A 339 5 4 HELIX 10 10 PRO A 343 GLU A 355 1 13 HELIX 11 11 LYS A 406 LEU A 425 1 20 SHEET 1 A11 SER A 4 PRO A 7 0 SHEET 2 A11 GLY A 125 LYS A 130 -1 O ILE A 128 N SER A 4 SHEET 3 A11 HIS A 117 GLN A 122 -1 N GLU A 120 O LEU A 127 SHEET 4 A11 TYR A 49 PHE A 52 -1 N LEU A 50 O TRP A 119 SHEET 5 A11 HIS A 29 ASN A 34 -1 N ALA A 31 O ALA A 51 SHEET 6 A11 SER A 214 PHE A 219 -1 O TYR A 216 N TYR A 32 SHEET 7 A11 GLU A 222 SER A 226 -1 O SER A 226 N VAL A 215 SHEET 8 A11 SER A 383 ASN A 387 -1 O TYR A 386 N TYR A 223 SHEET 9 A11 GLU A 392 ILE A 401 -1 O PHE A 394 N PHE A 385 SHEET 10 A11 GLU A 183 LYS A 193 -1 N ILE A 184 O ILE A 401 SHEET 11 A11 LYS A 157 GLN A 158 -1 N LYS A 157 O THR A 191 SHEET 1 B11 SER A 4 PRO A 7 0 SHEET 2 B11 GLY A 125 LYS A 130 -1 O ILE A 128 N SER A 4 SHEET 3 B11 HIS A 117 GLN A 122 -1 N GLU A 120 O LEU A 127 SHEET 4 B11 TYR A 49 PHE A 52 -1 N LEU A 50 O TRP A 119 SHEET 5 B11 HIS A 29 ASN A 34 -1 N ALA A 31 O ALA A 51 SHEET 6 B11 SER A 214 PHE A 219 -1 O TYR A 216 N TYR A 32 SHEET 7 B11 GLU A 222 SER A 226 -1 O SER A 226 N VAL A 215 SHEET 8 B11 SER A 383 ASN A 387 -1 O TYR A 386 N TYR A 223 SHEET 9 B11 GLU A 392 ILE A 401 -1 O PHE A 394 N PHE A 385 SHEET 10 B11 GLU A 183 LYS A 193 -1 N ILE A 184 O ILE A 401 SHEET 11 B11 GLY A 341 ALA A 342 -1 O ALA A 342 N GLU A 183 SHEET 1 C 9 ALA A 56 VAL A 60 0 SHEET 2 C 9 ALA A 110 ILE A 114 -1 O ALA A 110 N VAL A 60 SHEET 3 C 9 ILE A 82 ALA A 86 -1 N PHE A 83 O PHE A 113 SHEET 4 C 9 THR A 365 MSE A 369 -1 O MSE A 369 N ILE A 82 SHEET 5 C 9 PHE A 375 ASN A 378 -1 O ASN A 378 N VAL A 366 SHEET 6 C 9 ARG A 231 THR A 236 -1 N LYS A 235 O PHE A 375 SHEET 7 C 9 THR A 239 SER A 242 -1 O THR A 239 N THR A 236 SHEET 8 C 9 HIS A 310 THR A 319 -1 O VAL A 316 N SER A 242 SHEET 9 C 9 CYS A 296 THR A 305 -1 N CYS A 296 O GLN A 317 LINK C PRO A 210 N MSE A 211 1555 1555 1.34 LINK C MSE A 211 N PRO A 212 1555 1555 1.35 LINK C THR A 276 N MSE A 277 1555 1555 1.33 LINK C MSE A 277 N ILE A 278 1555 1555 1.33 LINK C PRO A 335 N MSE A 336 1555 1555 1.33 LINK C MSE A 336 N GLY A 337 1555 1555 1.32 LINK C SER A 338 N MSE A 339 1555 1555 1.34 LINK C MSE A 339 N THR A 340 1555 1555 1.33 LINK C VAL A 347 N MSE A 348 1555 1555 1.33 LINK C MSE A 348 N LYS A 349 1555 1555 1.34 LINK C SER A 356 N MSE A 357 1555 1555 1.33 LINK C MSE A 357 N ALA A 358 1555 1555 1.32 LINK C TYR A 368 N MSE A 369 1555 1555 1.33 LINK C MSE A 369 N ASP A 370 1555 1555 1.33 LINK C PHE A 394 N MSE A 395 1555 1555 1.33 LINK C MSE A 395 N GLU A 396 1555 1555 1.33 LINK C PRO A 420 N MSE A 421 1555 1555 1.33 LINK C MSE A 421 N ILE A 422 1555 1555 1.34 CISPEP 1 PHE A 334 PRO A 335 0 -12.65 CISPEP 2 ALA A 342 PRO A 343 0 -1.26 SITE 1 AC1 4 ILE A 58 GLU A 72 ILE A 73 TYR A 77 SITE 1 AC2 8 HIS A 29 SER A 54 GLU A 55 ALA A 56 SITE 2 AC2 8 ALA A 57 HIS A 59 PHE A 219 ASN A 220 CRYST1 60.006 159.497 115.542 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016665 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006270 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008655 0.00000