HEADER ISOMERASE/PROTEIN KINASE 30-APR-09 3H9R TITLE CRYSTAL STRUCTURE OF THE KINASE DOMAIN OF TYPE I ACTIVIN RECEPTOR TITLE 2 (ACVR1) IN COMPLEX WITH FKBP12 AND DORSOMORPHIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIVIN RECEPTOR TYPE-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ACVR1 KINASE DOMAIN (RESIDUE 172-499); COMPND 5 SYNONYM: ACTIVIN RECEPTOR TYPE I, ACTR-I, SERINE/THREONINE-PROTEIN COMPND 6 KINASE RECEPTOR R1, SKR1, ACTIVIN RECEPTOR-LIKE KINASE 2, ALK-2, TGF- COMPND 7 B SUPERFAMILY RECEPTOR TYPE I, TSR-I; COMPND 8 EC: 2.7.11.30; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP1A; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: FKBP12; COMPND 14 SYNONYM: PPIASE FKBP1A, FK506-BINDING PROTEIN 1A, FKBP-1A, ROTAMASE, COMPND 15 IMMUNOPHILIN FKBP12, 12 KDA FKBP, FKBP-12; COMPND 16 EC: 5.2.1.8; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ACVR1, ACVRLK2; SOURCE 6 EXPRESSION_SYSTEM: BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFB-LIC-BSE; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: FKBP1, FKBP12, FKBP1A; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, ATP- KEYWDS 2 BINDING, DISEASE MUTATION, GLYCOPROTEIN, KINASE, MAGNESIUM, KEYWDS 3 MANGANESE, MEMBRANE, METAL-BINDING, NUCLEOTIDE-BINDING, KEYWDS 4 PHOSPHOPROTEIN, RECEPTOR, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 5 TRANSFERASE, TRANSMEMBRANE, ISOMERASE, ROTAMASE, ISOMERASE-PROTEIN KEYWDS 6 KINASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,I.ALFANO,B.SHRESTHA,J.R.C.MUNIZ,K.PETRIE,O.FEDOROV, AUTHOR 2 C.PHILLIPS,S.BISHOP,P.MAHAJAN,A.C.W.PIKE,F.VON DELFT,C.H.ARROWSMITH, AUTHOR 3 A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,S.KNAPP,A.BULLOCK,STRUCTURAL AUTHOR 4 GENOMICS CONSORTIUM (SGC) REVDAT 4 06-SEP-23 3H9R 1 REMARK SEQADV REVDAT 3 28-NOV-12 3H9R 1 JRNL REVDAT 2 13-JUL-11 3H9R 1 VERSN REVDAT 1 02-JUN-09 3H9R 0 JRNL AUTH A.CHAIKUAD,I.ALFANO,G.KERR,C.E.SANVITALE,J.H.BOERGERMANN, JRNL AUTH 2 J.T.TRIFFITT,F.VON DELFT,S.KNAPP,P.KNAUS,A.N.BULLOCK JRNL TITL STRUCTURE OF THE BONE MORPHOGENETIC PROTEIN RECEPTOR ALK2 JRNL TITL 2 AND IMPLICATIONS FOR FIBRODYSPLASIA OSSIFICANS PROGRESSIVA. JRNL REF J.BIOL.CHEM. V. 287 36990 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22977237 JRNL DOI 10.1074/JBC.M112.365932 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0089 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 19063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1025 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1393 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3303 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 263 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 32.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.57000 REMARK 3 B22 (A**2) : -0.22000 REMARK 3 B33 (A**2) : -0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.407 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.269 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.187 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.726 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3464 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2385 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4677 ; 1.469 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5771 ; 0.894 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 415 ; 6.781 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;34.100 ;23.562 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 590 ;15.181 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;15.805 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 513 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3729 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 683 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2077 ; 1.322 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 850 ; 0.217 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3360 ; 2.645 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1387 ; 5.322 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1317 ; 7.624 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 189 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8825 8.3366 176.8082 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.0938 REMARK 3 T33: 0.1086 T12: -0.0173 REMARK 3 T13: 0.0014 T23: 0.0746 REMARK 3 L TENSOR REMARK 3 L11: 5.4678 L22: 4.8968 REMARK 3 L33: 10.9362 L12: 4.1672 REMARK 3 L13: 2.6387 L23: -0.0279 REMARK 3 S TENSOR REMARK 3 S11: -0.0724 S12: -0.0336 S13: -0.2773 REMARK 3 S21: 0.1392 S22: 0.0908 S23: 0.0135 REMARK 3 S31: 0.1883 S32: 0.2607 S33: -0.0184 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 190 A 290 REMARK 3 ORIGIN FOR THE GROUP (A): 22.2309 5.8893 163.3551 REMARK 3 T TENSOR REMARK 3 T11: 0.0178 T22: 0.0338 REMARK 3 T33: 0.0346 T12: -0.0179 REMARK 3 T13: 0.0051 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 1.9626 L22: 1.7625 REMARK 3 L33: 2.3677 L12: -0.3306 REMARK 3 L13: -0.6009 L23: -0.2890 REMARK 3 S TENSOR REMARK 3 S11: -0.0815 S12: 0.0054 S13: -0.1675 REMARK 3 S21: -0.0134 S22: 0.0732 S23: 0.1545 REMARK 3 S31: 0.1771 S32: -0.1413 S33: 0.0082 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 291 A 499 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5010 8.0785 139.6688 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.0414 REMARK 3 T33: 0.0374 T12: 0.0114 REMARK 3 T13: 0.0156 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.2906 L22: 1.7954 REMARK 3 L33: 2.1463 L12: 0.2734 REMARK 3 L13: 0.8291 L23: 0.1842 REMARK 3 S TENSOR REMARK 3 S11: 0.0387 S12: 0.0999 S13: -0.0345 REMARK 3 S21: -0.1102 S22: -0.0372 S23: -0.0313 REMARK 3 S31: 0.0905 S32: 0.1110 S33: -0.0015 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 57 REMARK 3 ORIGIN FOR THE GROUP (A): 25.6974 -4.7756 184.4160 REMARK 3 T TENSOR REMARK 3 T11: 0.1065 T22: 0.1504 REMARK 3 T33: 0.1025 T12: 0.0318 REMARK 3 T13: -0.0107 T23: 0.0662 REMARK 3 L TENSOR REMARK 3 L11: 2.7687 L22: 3.4786 REMARK 3 L33: 1.8395 L12: -1.2078 REMARK 3 L13: -0.1363 L23: 0.0435 REMARK 3 S TENSOR REMARK 3 S11: -0.0783 S12: -0.3093 S13: -0.0499 REMARK 3 S21: 0.3184 S22: 0.1119 S23: -0.1356 REMARK 3 S31: 0.1399 S32: -0.0021 S33: -0.0336 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 58 B 108 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5506 -8.1794 181.3413 REMARK 3 T TENSOR REMARK 3 T11: 0.1210 T22: 0.1186 REMARK 3 T33: 0.1506 T12: -0.0157 REMARK 3 T13: 0.0270 T23: 0.0649 REMARK 3 L TENSOR REMARK 3 L11: 1.8715 L22: 2.0443 REMARK 3 L33: 5.7725 L12: -0.5617 REMARK 3 L13: 1.7237 L23: 1.8083 REMARK 3 S TENSOR REMARK 3 S11: -0.1599 S12: -0.2433 S13: -0.0157 REMARK 3 S21: 0.1413 S22: 0.0100 S23: 0.0737 REMARK 3 S31: 0.0883 S32: -0.1052 S33: 0.1499 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3H9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1000052870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9050 REMARK 200 MONOCHROMATOR : SI (111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : KIRKPATRICK BAEZ BIMORPH MIRROR REMARK 200 PAIR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20161 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 42.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1A7X CHAIN A, 1B6C CHAIN B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 3350; 0.25M AMMONIUM SULPHATE; REMARK 280 0.1M BIS-TRIS, PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.67450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.79850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.17250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.79850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.67450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.17250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 170 REMARK 465 MET A 171 REMARK 465 ARG A 273 REMARK 465 HIS A 274 REMARK 465 SER A 275 REMARK 465 SER A 362 REMARK 465 GLN A 363 REMARK 465 SER A 364 REMARK 465 THR A 365 REMARK 465 ASN A 366 REMARK 465 GLN A 367 REMARK 465 LEU A 368 REMARK 465 ASP A 369 REMARK 465 VAL A 370 REMARK 465 GLY A 371 REMARK 465 ASN A 372 REMARK 465 ASN A 373 REMARK 465 PRO A 374 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 218 NE CZ NH1 NH2 REMARK 470 SER A 276 OG REMARK 470 ASP A 499 CG OD1 OD2 REMARK 470 ARG B 14 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 501 O HOH B 256 2.06 REMARK 500 O HOH A 148 O HOH A 555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 186 21.02 -76.91 REMARK 500 LEU A 211 -56.62 -125.23 REMARK 500 ASP A 336 43.54 -152.08 REMARK 500 ASP A 354 76.36 70.66 REMARK 500 ARG B 14 -38.64 -149.37 REMARK 500 ASP B 38 143.58 -170.07 REMARK 500 ALA B 82 -123.50 -125.75 REMARK 500 ILE B 91 -58.00 -137.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TAK A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 8 DBREF 3H9R A 172 499 UNP Q04771 ACVR1_HUMAN 172 499 DBREF 3H9R B 1 108 UNP P62942 FKB1A_HUMAN 1 108 SEQADV 3H9R SER A 170 UNP Q04771 EXPRESSION TAG SEQADV 3H9R MET A 171 UNP Q04771 EXPRESSION TAG SEQADV 3H9R SER B 0 UNP P62942 EXPRESSION TAG SEQRES 1 A 330 SER MET THR THR ASN VAL GLY ASP SER THR LEU ALA ASP SEQRES 2 A 330 LEU LEU ASP HIS SER CYS THR SER GLY SER GLY SER GLY SEQRES 3 A 330 LEU PRO PHE LEU VAL GLN ARG THR VAL ALA ARG GLN ILE SEQRES 4 A 330 THR LEU LEU GLU CYS VAL GLY LYS GLY ARG TYR GLY GLU SEQRES 5 A 330 VAL TRP ARG GLY SER TRP GLN GLY GLU ASN VAL ALA VAL SEQRES 6 A 330 LYS ILE PHE SER SER ARG ASP GLU LYS SER TRP PHE ARG SEQRES 7 A 330 GLU THR GLU LEU TYR ASN THR VAL MET LEU ARG HIS GLU SEQRES 8 A 330 ASN ILE LEU GLY PHE ILE ALA SER ASP MET THR SER ARG SEQRES 9 A 330 HIS SER SER THR GLN LEU TRP LEU ILE THR HIS TYR HIS SEQRES 10 A 330 GLU MET GLY SER LEU TYR ASP TYR LEU GLN LEU THR THR SEQRES 11 A 330 LEU ASP THR VAL SER CYS LEU ARG ILE VAL LEU SER ILE SEQRES 12 A 330 ALA SER GLY LEU ALA HIS LEU HIS ILE GLU ILE PHE GLY SEQRES 13 A 330 THR GLN GLY LYS PRO ALA ILE ALA HIS ARG ASP LEU LYS SEQRES 14 A 330 SER LYS ASN ILE LEU VAL LYS LYS ASN GLY GLN CYS CYS SEQRES 15 A 330 ILE ALA ASP LEU GLY LEU ALA VAL MET HIS SER GLN SER SEQRES 16 A 330 THR ASN GLN LEU ASP VAL GLY ASN ASN PRO ARG VAL GLY SEQRES 17 A 330 THR LYS ARG TYR MET ALA PRO GLU VAL LEU ASP GLU THR SEQRES 18 A 330 ILE GLN VAL ASP CYS PHE ASP SER TYR LYS ARG VAL ASP SEQRES 19 A 330 ILE TRP ALA PHE GLY LEU VAL LEU TRP GLU VAL ALA ARG SEQRES 20 A 330 ARG MET VAL SER ASN GLY ILE VAL GLU ASP TYR LYS PRO SEQRES 21 A 330 PRO PHE TYR ASP VAL VAL PRO ASN ASP PRO SER PHE GLU SEQRES 22 A 330 ASP MET ARG LYS VAL VAL CYS VAL ASP GLN GLN ARG PRO SEQRES 23 A 330 ASN ILE PRO ASN ARG TRP PHE SER ASP PRO THR LEU THR SEQRES 24 A 330 SER LEU ALA LYS LEU MET LYS GLU CYS TRP TYR GLN ASN SEQRES 25 A 330 PRO SER ALA ARG LEU THR ALA LEU ARG ILE LYS LYS THR SEQRES 26 A 330 LEU THR LYS ILE ASP SEQRES 1 B 109 SER MET GLY VAL GLN VAL GLU THR ILE SER PRO GLY ASP SEQRES 2 B 109 GLY ARG THR PHE PRO LYS ARG GLY GLN THR CYS VAL VAL SEQRES 3 B 109 HIS TYR THR GLY MET LEU GLU ASP GLY LYS LYS PHE ASP SEQRES 4 B 109 SER SER ARG ASP ARG ASN LYS PRO PHE LYS PHE MET LEU SEQRES 5 B 109 GLY LYS GLN GLU VAL ILE ARG GLY TRP GLU GLU GLY VAL SEQRES 6 B 109 ALA GLN MET SER VAL GLY GLN ARG ALA LYS LEU THR ILE SEQRES 7 B 109 SER PRO ASP TYR ALA TYR GLY ALA THR GLY HIS PRO GLY SEQRES 8 B 109 ILE ILE PRO PRO HIS ALA THR LEU VAL PHE ASP VAL GLU SEQRES 9 B 109 LEU LEU LYS LEU GLU HET TAK A 1 30 HET SO4 A 500 5 HET SO4 A 2 5 HET SO4 A 3 5 HET SO4 A 4 5 HET SO4 A 5 5 HET PG4 A 6 13 HET PG4 A 7 13 HET PG4 A 8 13 HETNAM TAK 6-[4-(2-PIPERIDIN-1-YLETHOXY)PHENYL]-3-PYRIDIN-4- HETNAM 2 TAK YLPYRAZOLO[1,5-A]PYRIMIDINE HETNAM SO4 SULFATE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN TAK DORSOMORPHIN FORMUL 3 TAK C24 H25 N5 O FORMUL 4 SO4 5(O4 S 2-) FORMUL 9 PG4 3(C8 H18 O5) FORMUL 12 HOH *263(H2 O) HELIX 1 1 THR A 179 HIS A 186 1 8 HELIX 2 2 PRO A 197 ARG A 206 1 10 HELIX 3 3 ASP A 241 VAL A 255 1 15 HELIX 4 4 SER A 290 THR A 298 1 9 HELIX 5 5 ASP A 301 ILE A 321 1 21 HELIX 6 6 LYS A 338 LYS A 340 5 3 HELIX 7 7 THR A 378 MET A 382 5 5 HELIX 8 8 ALA A 383 ASP A 388 1 6 HELIX 9 9 CYS A 395 ARG A 416 1 22 HELIX 10 10 SER A 440 CYS A 449 1 10 HELIX 11 11 PRO A 458 SER A 463 5 6 HELIX 12 12 ASP A 464 GLU A 476 1 13 HELIX 13 13 ASN A 481 ARG A 485 5 5 HELIX 14 14 THR A 487 ASP A 499 1 13 HELIX 15 15 ILE B 57 GLN B 66 1 10 HELIX 16 16 PRO B 79 ALA B 82 5 4 SHEET 1 A 5 THR A 209 GLY A 217 0 SHEET 2 A 5 GLY A 220 TRP A 227 -1 O ARG A 224 N GLU A 212 SHEET 3 A 5 GLU A 230 PHE A 237 -1 O VAL A 234 N TRP A 223 SHEET 4 A 5 GLN A 278 THR A 283 -1 O LEU A 281 N LYS A 235 SHEET 5 A 5 PHE A 265 THR A 271 -1 N ASP A 269 O TRP A 280 SHEET 1 B 2 ALA A 331 ALA A 333 0 SHEET 2 B 2 VAL A 359 HIS A 361 -1 O HIS A 361 N ALA A 331 SHEET 1 C 2 ILE A 342 VAL A 344 0 SHEET 2 C 2 CYS A 350 ILE A 352 -1 O CYS A 351 N LEU A 343 SHEET 1 D 5 VAL B 3 SER B 9 0 SHEET 2 D 5 ARG B 72 ILE B 77 -1 O LYS B 74 N GLU B 6 SHEET 3 D 5 LEU B 98 GLU B 108 -1 O PHE B 100 N LEU B 75 SHEET 4 D 5 THR B 22 LEU B 31 -1 N THR B 28 O ASP B 101 SHEET 5 D 5 LYS B 36 SER B 39 -1 O ASP B 38 N GLY B 29 SHEET 1 E 5 VAL B 3 SER B 9 0 SHEET 2 E 5 ARG B 72 ILE B 77 -1 O LYS B 74 N GLU B 6 SHEET 3 E 5 LEU B 98 GLU B 108 -1 O PHE B 100 N LEU B 75 SHEET 4 E 5 THR B 22 LEU B 31 -1 N THR B 28 O ASP B 101 SHEET 5 E 5 PHE B 47 MET B 50 -1 O PHE B 47 N VAL B 25 SITE 1 AC1 14 VAL A 175 GLY A 176 GLU A 212 VAL A 214 SITE 2 AC1 14 ALA A 233 LYS A 235 THR A 283 HIS A 284 SITE 3 AC1 14 TYR A 285 HIS A 286 GLU A 287 GLY A 289 SITE 4 AC1 14 LEU A 343 HOH A 576 SITE 1 AC2 9 HOH A 121 HOH A 122 HOH A 123 HIS A 284 SITE 2 AC2 9 HIS A 286 LYS A 345 LYS A 346 HOH A 518 SITE 3 AC2 9 HOH A 559 SITE 1 AC3 6 HOH A 43 HOH A 93 ARG A 380 ASN A 437 SITE 2 AC3 6 ASP A 438 PRO A 439 SITE 1 AC4 4 ARG A 206 SER A 272 GLN B 54 HOH B 138 SITE 1 AC5 3 SER A 440 ARG A 490 LYS A 493 SITE 1 AC6 4 ARG A 218 LYS A 338 HOH A 512 HOH A 513 SITE 1 AC7 8 HOH A 11 LEU A 184 GLU A 230 ASN A 231 SITE 2 AC7 8 LEU A 263 GLY A 264 HIS A 284 HIS A 286 SITE 1 AC8 8 HOH A 45 HOH A 80 THR A 179 LEU A 210 SITE 2 AC8 8 TRP A 223 GLU A 230 ILE A 236 GLN A 278 SITE 1 AC9 7 TYR A 432 ASP A 433 VAL A 435 ASN A 437 SITE 2 AC9 7 LYS A 497 HOH A 568 HOH A 569 CRYST1 43.349 62.345 171.597 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023068 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016040 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005828 0.00000